The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	87231	95051	2799899		Hokovirus(16.67%)	10	NA	NA
AVG57035.1|87231_88287_-	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
AVG57036.1|88286_88973_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AVG57037.1|88947_89421_-	DoxX family protein	NA	NA	NA	NA	NA
AVG57038.1|89762_90203_-	hypothetical protein	NA	NA	NA	NA	NA
AVG57039.1|90482_91067_-	hypothetical protein	NA	NA	NA	NA	NA
AVG57040.1|91165_91879_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AVG57041.1|91882_92302_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AVG57042.1|92303_92972_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AVG57043.1|93322_93916_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AVG57044.1|93899_95051_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 2
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	107023	121754	2799899		uncultured_Caudovirales_phage(50.0%)	18	NA	NA
AVG57054.1|107023_108082_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AVG57055.1|108432_108975_+	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AVG57056.1|109087_109186_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57057.1|109598_110516_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
AVG57058.1|110606_110708_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57059.1|110785_112291_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AVG57060.1|112356_112602_-	hypothetical protein	NA	NA	NA	NA	NA
AVG57061.1|112631_113132_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AVG57062.1|113151_114018_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AVG57063.1|114402_114669_+	ribonucleoside-diphosphate reductase	NA	NA	NA	NA	NA
AVG57064.1|114818_115217_+	protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AVG57065.1|115179_117285_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AVG57066.1|117402_118374_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AVG57067.1|118506_118611_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57068.1|118887_119043_+	hypothetical protein	NA	NA	NA	NA	NA
AVG59646.1|119081_120053_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AVG57069.1|120039_120996_+	iron ABC transporter permease	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AVG57070.1|120992_121754_+	iron ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	292386	347264	2799899	protease,bacteriocin,holin,tRNA	Streptococcus_phage(28.57%)	56	NA	NA
AVG57240.1|292386_293376_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AVG57241.1|293670_294066_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
AVG57242.1|294436_295156_+	adaptor protein MecA	NA	NA	NA	NA	NA
AVG57243.1|295276_296263_+	competence protein CoiA	NA	NA	NA	NA	NA
AVG57244.1|296310_298119_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	9.3e-47
AVG57245.1|298578_299385_-	DsbA family protein	NA	NA	NA	NA	NA
AVG57246.1|299407_299773_-	globin	NA	NA	NA	NA	NA
AVG57247.1|299876_300470_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
AVG57248.1|300655_301003_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57249.1|301019_301655_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
AVG57250.1|301671_302481_+	NAD(+) kinase	NA	NA	NA	NA	NA
AVG57251.1|302477_303332_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AVG57252.1|303352_304738_+	magnesium transporter	NA	NA	NA	NA	NA
AVG57253.1|304747_306592_+	sodium:proton antiporter	NA	NA	NA	NA	NA
AVG57254.1|306869_307640_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AVG57255.1|307834_308920_-	AI-2E family transporter	NA	NA	NA	NA	NA
AVG57256.1|309261_310830_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
AVG57257.1|310971_311730_+	esterase family protein	NA	NA	NA	NA	NA
AVG57258.1|311923_312433_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57259.1|312545_313754_-	MFS transporter	NA	NA	NA	NA	NA
AVG57260.1|313713_314889_-	diacylglycerol beta-glucosyltransferase	NA	NA	NA	NA	NA
AVG57261.1|315321_316803_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
AVG57262.1|316786_317047_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57263.1|317046_318609_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	4.9e-36
AVG57264.1|318910_319714_+	hypothetical protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
AVG57265.1|319932_322257_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.1	8.1e-11
AVG57266.1|322273_323632_+	Ktr system potassium uptake protein D	NA	NA	NA	NA	NA
AVG57267.1|323770_325282_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
AVG57268.1|325768_326338_-	competence protein ComK	NA	NA	NA	NA	NA
AVG57269.1|326547_326766_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
AVG57270.1|326846_327833_-	lipoate--protein ligase	NA	NA	NA	NA	NA
AVG57271.1|328031_328208_+	DUF2187 domain-containing protein	NA	NA	NA	NA	NA
AVG57272.1|328222_328825_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVG59650.1|329125_329203_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
AVG57273.1|329741_329843_+	hypothetical protein	NA	NA	NA	NA	NA
AVG59651.1|329852_330125_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
AVG57274.1|330168_332133_+	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
AVG57275.1|332135_332456_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57276.1|332452_333094_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
AVG57277.1|333181_333472_-	hypothetical protein	NA	NA	NA	NA	NA
AVG57278.1|333750_334038_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57279.1|334043_335525_+	glycosyl transferase family 1	NA	NA	NA	NA	NA
AVG57280.1|335613_335970_-	DoxX family protein	NA	NA	NA	NA	NA
AVG57281.1|336457_337417_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVG57282.1|337462_337594_-	hypothetical protein	NA	NA	NA	NA	NA
AVG57283.1|337657_337948_-	NINE protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
AVG57284.1|338037_338589_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVG57285.1|338639_339578_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
AVG57286.1|339728_339833_+	hypothetical protein	NA	NA	NA	NA	NA
AVG57287.1|339909_341121_+	isochorismate synthase	NA	NA	NA	NA	NA
AVG57288.1|341107_342781_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	NA	NA	NA	NA	NA
AVG57289.1|342767_343571_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
AVG57290.1|343563_344385_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
AVG57291.1|344623_344953_-	staphostatin B	NA	NA	NA	NA	NA
AVG57292.1|344990_346172_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
AVG57293.1|346253_347264_-|protease	serine protease	protease	A0A2H4PQP7	Staphylococcus_phage	32.3	6.2e-16
>prophage 4
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	366159	374632	2799899		Synechococcus_phage(33.33%)	9	NA	NA
AVG57310.1|366159_366642_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
AVG57311.1|366628_367753_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AVG57312.1|367756_368461_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
AVG57313.1|368460_368724_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AVG57314.1|368725_369397_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AVG57315.1|369389_371579_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
AVG57316.1|371557_373042_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AVG57317.1|373034_374063_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
AVG57318.1|374065_374632_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	426289	473207	2799899	terminase,head,portal,capsid,holin,tail,plate	Staphylococcus_phage(80.0%)	69	NA	NA
AVG57371.1|426289_426772_+	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
AVG57372.1|426833_427973_-	nucleotidyltransferase	NA	NA	NA	NA	NA
AVG57373.1|428099_428657_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
AVG57374.1|428568_428793_-	hypothetical protein	NA	NA	NA	NA	NA
AVG57375.1|428736_428910_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AVG57376.1|429026_430412_-	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
AVG57377.1|430618_431299_-	hypothetical protein	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
AVG57378.1|431334_432105_-	helix-turn-helix domain-containing protein	NA	A0A1X9H0P5	Staphylococcus_phage	97.3	3.2e-137
AVG57379.1|432264_432486_+	DUF739 domain-containing protein	NA	A0A1X9H090	Staphylococcus_phage	100.0	7.6e-36
AVG57380.1|432509_432953_+	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
AVG57381.1|432967_433108_+	hypothetical protein	NA	A0A0H4ITW0	Staphylococcus_phage	97.8	2.1e-15
AVG57382.1|433120_433723_-	hypothetical protein	NA	B7T096	Staphylococcus_virus	98.0	9.8e-102
AVG57383.1|434162_434348_+	XRE family transcriptional regulator	NA	A0A0H4IP57	Staphylococcus_phage	100.0	1.3e-25
AVG57384.1|434349_435102_+	oxidoreductase	NA	A0A0E3T9K5	Staphylococcus_phage	99.2	4.8e-138
AVG57385.1|435268_435499_-	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
AVG57386.1|435678_435840_+	DUF1270 domain-containing protein	NA	C8CGY5	Staphylococcus_phage	100.0	2.5e-20
AVG57387.1|435934_436195_+	DUF1108 domain-containing protein	NA	A0A1W6JQ03	Staphylococcus_phage	100.0	7.6e-43
AVG57388.1|436207_436744_+	hypothetical protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
AVG57389.1|436744_437395_+	single-stranded DNA-binding protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
AVG57390.1|437391_437835_+	single-stranded DNA-binding protein	NA	A0A2I6PD99	Staphylococcus_phage	95.9	3.2e-73
AVG57391.1|437846_438542_+	hypothetical protein	NA	A0A2I6PDU6	Staphylococcus_phage	99.1	1.1e-128
AVG57392.1|438513_439314_+	DnaD domain protein	NA	Q8SDW2	Staphylococcus_phage	98.5	8.7e-106
AVG57393.1|439313_439685_+	hypothetical protein	NA	C8CGZ2	Staphylococcus_phage	100.0	4.0e-61
AVG57394.1|439665_440907_+	damage-inducible protein	NA	M9NSS7	Staphylococcus_phage	100.0	2.6e-229
AVG57395.1|440903_441119_+	hypothetical protein	NA	Q4ZBU5	Staphylococcus_virus	100.0	4.8e-35
AVG57396.1|441121_441343_+	hypothetical protein	NA	A0A2H4PQI9	Staphylococcus_phage	97.3	1.4e-34
AVG57397.1|441352_441757_+	DUF1064 domain-containing protein	NA	Q6R835	Staphylococcus_virus	98.5	2.3e-70
AVG57398.1|441761_441947_+	DUF3113 domain-containing protein	NA	Q4ZA46	Staphylococcus_virus	100.0	4.1e-27
AVG57399.1|442564_442807_+	hypothetical protein	NA	A0A2D1G5G2	Staphylococcus_phage	97.5	1.2e-39
AVG57400.1|442819_443221_+	hypothetical protein	NA	S4V6D5	Staphylococcus_phage	99.2	2.1e-68
AVG57401.1|443217_443502_+	hypothetical protein	NA	S4V9L1	Staphylococcus_phage	100.0	3.2e-47
AVG57402.1|443494_443731_+	hypothetical protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
AVG57403.1|443735_444248_+	dUTP pyrophosphatase	NA	Q4ZDG4	Staphylococcus_virus	100.0	2.5e-90
AVG57404.1|444284_444479_+	DUF1381 domain-containing protein	NA	A7TWH8	Staphylococcus_phage	85.2	1.1e-19
AVG57405.1|444475_444679_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
AVG57406.1|444671_444908_+	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
AVG57407.1|444900_445074_+	transcriptional regulator	NA	R4IFL3	Staphylococcus_phage	96.5	4.1e-21
AVG57408.1|445074_445440_+	hypothetical protein	NA	Q4ZBJ9	Staphylococcus_phage	96.7	1.5e-57
AVG57409.1|445440_445587_+	hypothetical protein	NA	A0A059T5A8	Staphylococcus_phage	97.9	3.7e-15
AVG57410.1|445601_446021_+	transcriptional regulator	NA	I1W651	Staphylococcus_phage	99.3	2.4e-70
AVG57411.1|446207_446702_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	99.4	2.3e-88
AVG57412.1|446704_448000_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0F6N3L3	Staphylococcus_phage	99.3	2.8e-255
AVG57413.1|448010_449546_+|portal	phage portal protein	portal	B7T0C7	Staphylococcus_virus	97.7	3.8e-283
AVG57414.1|449552_450548_+|head	phage head morphogenesis protein	head	S4V9L8	Staphylococcus_phage	98.2	1.1e-182
AVG57415.1|450620_450791_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
AVG57416.1|450899_451520_+	DUF4355 domain-containing protein	NA	B2ZYY4	Staphylococcus_phage	97.6	3.1e-74
AVG57417.1|451533_452508_+|capsid	phage major capsid protein	capsid	A0EWT0	Staphylococcus_virus	99.7	4.8e-183
AVG57418.1|452529_452817_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.1e-45
AVG57419.1|452825_453158_+|head,tail	phage head-tail adapter protein	head,tail	E0Y3L2	Staphylococcus_virus	100.0	7.1e-54
AVG57420.1|453154_453457_+	hypothetical protein	NA	E0Y3L3	Staphylococcus_virus	96.0	2.8e-49
AVG57421.1|453456_453804_+	hypothetical protein	NA	I1W643	Staphylococcus_phage	100.0	5.3e-60
AVG57422.1|453815_454199_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	3.8e-67
AVG57423.1|454217_454799_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	99.5	6.3e-106
AVG57424.1|454860_455226_+|tail	phage tail protein	tail	Q8SDT9	Staphylococcus_phage	100.0	2.8e-59
AVG57425.1|455255_455600_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
AVG57426.1|455616_459081_+	hypothetical protein	NA	Q4ZDL9	Staphylococcus_virus	99.7	1.2e-265
AVG57427.1|459093_460041_+|tail	phage tail family protein	tail	I1W635	Staphylococcus_phage	100.0	2.8e-183
AVG57428.1|460049_461948_+	peptidase	NA	A0A0F6N3M1	Staphylococcus_phage	100.0	0.0e+00
AVG57429.1|461962_463873_+	hypothetical protein	NA	B2ZYZ7	Staphylococcus_phage	98.4	0.0e+00
AVG57430.1|463872_465696_+|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	99.8	0.0e+00
AVG57431.1|465695_466073_+	DUF2977 domain-containing protein	NA	Q8LTH7	Staphylococcus_phage	100.0	7.3e-55
AVG59653.1|466076_466250_+	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
AVG57432.1|466290_466590_+	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
AVG57433.1|466726_468625_+	CHAP domain-containing protein	NA	A0A0F6N4K6	Staphylococcus_phage	98.7	0.0e+00
AVG57434.1|468637_469810_+	DUF2479 domain-containing protein	NA	A0A2I6PCW8	Staphylococcus_phage	100.0	2.2e-198
AVG57435.1|469815_470211_+	hypothetical protein	NA	A0A2H4PQP8	Staphylococcus_phage	100.0	2.1e-68
AVG57436.1|470266_470704_+|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	100.0	4.1e-73
AVG57437.1|470684_472130_+	CHAP domain-containing protein	NA	A0A2H4PQR3	Staphylococcus_phage	100.0	8.2e-296
AVG57438.1|472823_473207_+	hypothetical protein	NA	A0A2H4PQP6	Staphylococcus_phage	100.0	1.6e-65
>prophage 6
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	954443	962755	2799899	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AVG57889.1|954443_955229_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AVG57890.1|955354_956245_-	endonuclease	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AVG57891.1|956254_957601_-	DEAD/DEAH box family ATP-dependent RNA helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
AVG57892.1|957714_958815_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AVG57893.1|958817_959495_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AVG57894.1|959625_960732_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AVG57895.1|960955_962755_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 7
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	1031893	1040936	2799899	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AVG57965.1|1031893_1032412_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AVG57966.1|1032433_1034707_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
AVG57967.1|1034909_1037189_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AVG57968.1|1037463_1037724_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AVG57969.1|1037742_1038882_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AVG57970.1|1038904_1039930_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AVG57971.1|1039931_1040936_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	1166709	1248197	2799899	protease,transposase,bacteriocin,tRNA	Staphylococcus_phage(93.55%)	80	NA	NA
AVG58086.1|1166709_1173270_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	3.4e-304
AVG58087.1|1173612_1173924_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AVG58088.1|1173945_1176363_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
AVG58089.1|1176650_1177832_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AVG58090.1|1177941_1178895_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AVG58091.1|1178891_1179455_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AVG58092.1|1179574_1179976_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVG58093.1|1181554_1182382_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AVG58094.1|1182384_1182504_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58095.1|1182515_1182707_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58096.1|1182615_1183617_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AVG58097.1|1183738_1184203_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AVG58098.1|1184215_1185397_-	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AVG58099.1|1185407_1186040_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AVG59672.1|1186046_1187078_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
AVG58100.1|1187570_1189073_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AVG58101.1|1189595_1189910_+	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
AVG58102.1|1189909_1191202_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	1.9e-227
AVG58103.1|1191219_1191615_+	protein ArsC	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
AVG58104.1|1191909_1192764_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AVG58105.1|1193039_1193264_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58106.1|1193462_1193933_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	3.3e-81
AVG58107.1|1194045_1194489_+	competence protein ComK	NA	NA	NA	NA	NA
AVG58108.1|1194475_1194919_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
AVG58109.1|1195214_1195850_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVG58110.1|1196289_1197003_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AVG58111.1|1197262_1197565_+	hypothetical protein	NA	NA	NA	NA	NA
AVG58112.1|1197820_1198186_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AVG58113.1|1198182_1198536_+	camphor resistance protein CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
AVG58114.1|1200619_1201453_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
AVG58115.1|1201664_1202573_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
AVG58116.1|1202697_1203891_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AVG58117.1|1204261_1205854_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AVG58118.1|1205989_1206475_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
AVG59673.1|1206849_1207596_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
AVG58119.1|1207600_1208074_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
AVG58120.1|1208139_1208397_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AVG58121.1|1208393_1209395_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
AVG58122.1|1209399_1210878_-	2-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
AVG59674.1|1211036_1211492_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
AVG58123.1|1211794_1212445_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
AVG58124.1|1212525_1213521_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
AVG58125.1|1213596_1214223_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
AVG58126.1|1214263_1214608_+	DUF3969 domain-containing protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
AVG58127.1|1214705_1215257_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
AVG58128.1|1215474_1216116_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
AVG58129.1|1216229_1216415_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58130.1|1216416_1216593_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58131.1|1216603_1216987_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58132.1|1217178_1217388_-|transposase	transposase	transposase	A0A2H4PQV6	Staphylococcus_phage	100.0	1.4e-31
AVG58133.1|1217590_1217734_-	hypothetical protein	NA	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
AVG58134.1|1218154_1218256_+	hypothetical protein	NA	NA	NA	NA	NA
AVG59675.1|1218603_1218963_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
AVG58135.1|1219500_1223613_-	ATP-binding protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
AVG58136.1|1224462_1225662_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	100.0	8.5e-230
AVG58137.1|1225654_1227394_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
AVG58138.1|1227374_1227509_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58139.1|1227573_1228293_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
AVG58140.1|1228443_1229160_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
AVG58141.1|1229261_1229369_+	hypothetical protein	NA	NA	NA	NA	NA
AVG58142.1|1229317_1230037_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AVG58143.1|1230157_1230877_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
AVG58144.1|1230934_1231657_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
AVG58145.1|1231781_1232489_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
AVG58146.1|1232924_1233143_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58147.1|1233452_1234019_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
AVG58148.1|1234492_1235191_-	BsaG protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
AVG58149.1|1235187_1235949_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
AVG58150.1|1235945_1236638_-	lantibiotic ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
AVG58151.1|1236660_1238034_-	peptidase S8	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
AVG58152.1|1238043_1238562_-	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
AVG58153.1|1238577_1239822_-	lanthionine synthetase	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
AVG58154.1|1239814_1242808_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
AVG58155.1|1242872_1243016_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
AVG58156.1|1243459_1243651_+	hypothetical protein	NA	NA	NA	NA	NA
AVG58157.1|1243752_1243896_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
AVG58158.1|1244137_1245121_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
AVG59676.1|1245122_1246028_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	3.6e-172
AVG58159.1|1246856_1247396_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
AVG58160.1|1247408_1248197_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 9
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	1276719	1350557	2799899	terminase,head,portal,transposase,capsid,holin,tail,tRNA,plate,integrase	Staphylococcus_phage(79.69%)	87	1319429:1319446	1354021:1354038
AVG58190.1|1276719_1277190_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
AVG58191.1|1277194_1278337_-	epoxyqueuosine reductase	NA	NA	NA	NA	NA
AVG58192.1|1278472_1279201_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
AVG58193.1|1279187_1280645_-	ABC transporter permease	NA	NA	NA	NA	NA
AVG58194.1|1280902_1281964_-	PTS transporter subunit IIC	NA	NA	NA	NA	NA
AVG58195.1|1282456_1283659_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AVG58196.1|1292349_1292796_-	transcriptional repressor	NA	NA	NA	NA	NA
AVG58197.1|1292892_1293843_-	hydroxyacid dehydrogenase	NA	NA	NA	NA	NA
AVG58198.1|1293848_1294304_-	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
AVG58199.1|1294384_1295674_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
AVG59677.1|1295966_1297061_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
AVG58200.1|1297150_1297243_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58201.1|1297251_1298988_-	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
AVG58202.1|1299278_1299821_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
AVG58203.1|1300122_1301160_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AVG58204.1|1301311_1302289_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AVG58205.1|1302392_1302623_+	hypothetical protein	NA	NA	NA	NA	NA
AVG58206.1|1302549_1303386_-	hypothetical protein	NA	NA	NA	NA	NA
AVG58207.1|1303394_1304912_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AVG58208.1|1304926_1305241_-	DUF1811 domain-containing protein	NA	NA	NA	NA	NA
AVG58209.1|1305218_1306037_-	regulatory protein RecX	NA	NA	NA	NA	NA
AVG58210.1|1306297_1307107_-	monofunctional glycosyltransferase	NA	NA	NA	NA	NA
AVG58211.1|1307447_1307963_-	type 1 glutamine amidotransferase	NA	NA	NA	NA	NA
AVG58212.1|1308093_1308255_-	hypothetical protein	NA	NA	NA	NA	NA
AVG59678.1|1308601_1308682_+	hypothetical protein	NA	NA	NA	NA	NA
AVG58213.1|1308678_1308912_-	hypothetical protein	NA	A7TWL2	Staphylococcus_phage	93.1	1.9e-32
AVG58214.1|1309268_1310714_-	CHAP domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	98.5	1.0e-293
AVG58215.1|1310694_1311132_-|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	100.0	4.1e-73
AVG58216.1|1311187_1311583_-	hypothetical protein	NA	Q4ZBW9	Staphylococcus_virus	99.2	6.1e-68
AVG58217.1|1311588_1312761_-	DUF2479 domain-containing protein	NA	A0EWN2	Staphylococcus_virus	99.0	1.2e-196
AVG58218.1|1312773_1314648_-	CHAP domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	99.7	0.0e+00
AVG58219.1|1314784_1315084_-	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
AVG59679.1|1315124_1315298_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
AVG58220.1|1315301_1315679_-	DUF2977 domain-containing protein	NA	Q8LTH7	Staphylococcus_phage	100.0	7.3e-55
AVG58221.1|1315678_1317502_-|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	99.8	0.0e+00
AVG58222.1|1317501_1319400_-	hypothetical protein	NA	Q4ZBQ2	Staphylococcus_phage	100.0	0.0e+00
AVG58223.1|1319412_1321299_-	peptidase	NA	A0A2I6PCV9	Staphylococcus_phage	99.4	0.0e+00
1319429:1319446	attL	TAATAATCCTTGATTAAC	NA	NA	NA	NA
AVG58224.1|1321309_1322245_-|tail	phage tail protein	tail	A7YGW1	Staphylococcus_virus	98.7	4.5e-178
AVG58225.1|1322259_1325229_-|terminase	terminase	terminase	A0A2H4PQM1	Staphylococcus_phage	98.9	2.6e-264
AVG58226.1|1325231_1325573_-	hypothetical protein	NA	A0A2H4PQL5	Staphylococcus_phage	99.1	7.8e-56
AVG58227.1|1325593_1326088_-	hypothetical protein	NA	A0A0H4IPX9	Staphylococcus_phage	99.4	1.2e-86
AVG58228.1|1326149_1326710_-|tail	phage tail protein	tail	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
AVG58229.1|1326696_1327134_-	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	100.0	2.1e-77
AVG58230.1|1327146_1327560_-	hypothetical protein	NA	A0A0E3XCY8	Staphylococcus_phage	99.3	4.4e-77
AVG58231.1|1327546_1327882_-|head,tail	phage head-tail adapter protein	head,tail	A0A0H4ISR6	Staphylococcus_phage	99.1	1.4e-60
AVG58232.1|1327874_1328189_-|head,tail	phage head-tail adapter protein	head,tail	A0A2H4PQL2	Staphylococcus_phage	99.0	9.8e-53
AVG58233.1|1328188_1328515_-	Rho termination protein	NA	A0A2H4PQK8	Staphylococcus_phage	98.1	4.7e-50
AVG58234.1|1328531_1329356_-|capsid	N4-gp56 family major capsid protein	capsid	R4IH32	Staphylococcus_phage	99.6	1.6e-147
AVG58235.1|1329376_1329973_-	hypothetical protein	NA	A0A0H4IP83	Staphylococcus_phage	79.3	1.7e-77
AVG58236.1|1330070_1331051_-|head	phage head morphogenesis protein	head	A0A2H4PQJ8	Staphylococcus_phage	99.1	2.9e-180
AVG58237.1|1330989_1332468_-|portal	phage portal protein	portal	A0A0E3T8M2	Staphylococcus_phage	99.4	1.1e-284
AVG58238.1|1332421_1333630_-|terminase	PBSX family phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	99.8	4.0e-235
AVG58239.1|1333622_1334117_-|terminase	terminase	terminase	A0A2I6PCU5	Staphylococcus_phage	99.4	4.9e-83
AVG58240.1|1334471_1334873_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
AVG58241.1|1334873_1335047_-	transcriptional regulator	NA	A0A0H3U4U1	Staphylococcus_phage	100.0	9.8e-23
AVG58242.1|1335043_1335250_-	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
AVG58243.1|1335246_1335492_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
AVG58244.1|1335528_1336065_-	dUTPase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
AVG58245.1|1336069_1336306_-	hypothetical protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
AVG58246.1|1336298_1336583_-	hypothetical protein	NA	S4V9L1	Staphylococcus_phage	100.0	3.2e-47
AVG58247.1|1336579_1336981_-	hypothetical protein	NA	S4V6D5	Staphylococcus_phage	99.2	2.1e-68
AVG58248.1|1336993_1337236_-	hypothetical protein	NA	A0A2D1G5G2	Staphylococcus_phage	97.5	1.2e-39
AVG58249.1|1337239_1337611_-	hypothetical protein	NA	Q4ZAC3	Staphylococcus_virus	90.7	1.9e-47
AVG58250.1|1337853_1338039_-	DUF3113 domain-containing protein	NA	Q4ZA46	Staphylococcus_virus	100.0	4.1e-27
AVG58251.1|1338043_1338448_-	DUF1064 domain-containing protein	NA	Q6R835	Staphylococcus_virus	98.5	2.3e-70
AVG58252.1|1338457_1338679_-	hypothetical protein	NA	A0A2H4PQI9	Staphylococcus_phage	97.3	1.4e-34
AVG58253.1|1338682_1338898_-	hypothetical protein	NA	Q4ZBU5	Staphylococcus_virus	100.0	4.8e-35
AVG58254.1|1338894_1340136_-	damage-inducible protein	NA	M9NSS7	Staphylococcus_phage	100.0	2.6e-229
AVG58255.1|1340132_1340489_-	hypothetical protein	NA	M9NS37	Staphylococcus_phage	100.0	8.2e-64
AVG58256.1|1340488_1341244_-	DnaD domain protein	NA	C8CGZ1	Staphylococcus_phage	100.0	3.8e-143
AVG58257.1|1341236_1341911_-	hypothetical protein	NA	C8CGZ0	Staphylococcus_phage	100.0	4.7e-129
AVG58258.1|1341924_1342353_-	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	91.5	6.8e-57
AVG58259.1|1342352_1343006_-	single-stranded DNA-binding protein	NA	A0A1J0MFT8	Staphylococcus_phage	61.4	2.6e-68
AVG58260.1|1343006_1343543_-	hypothetical protein	NA	A0A0F6N4M6	Staphylococcus_phage	99.4	2.5e-80
AVG58261.1|1343555_1343816_-	DUF1108 domain-containing protein	NA	A0A1W6JQ03	Staphylococcus_phage	95.3	9.3e-41
AVG58262.1|1343912_1344074_-	DUF1270 domain-containing protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
AVG58263.1|1344066_1344288_-	hypothetical protein	NA	E0Y3P2	Staphylococcus_virus	100.0	1.5e-31
AVG58264.1|1344359_1345025_+	hypothetical protein	NA	Q9G033	Staphylococcus_virus	97.7	5.0e-115
AVG58265.1|1345138_1345882_-	oxidoreductase	NA	S4SW96	Staphylococcus_phage	100.0	2.3e-137
AVG58266.1|1345938_1346178_+	hypothetical protein	NA	A0A0H3U4W2	Staphylococcus_phage	100.0	7.0e-43
AVG58267.1|1346167_1346347_-	hypothetical protein	NA	A0A0N9BAV3	Staphylococcus_phage	100.0	1.7e-25
AVG58268.1|1346362_1347139_-	phage antirepressor	NA	M1RZB2	Staphylococcus_phage	96.9	4.9e-138
AVG58269.1|1347154_1347373_-	XRE family transcriptional regulator	NA	Q8SDX1	Staphylococcus_phage	100.0	2.9e-35
AVG58270.1|1347514_1348234_+	XRE family transcriptional regulator	NA	A0A1X9H038	Staphylococcus_phage	75.5	2.6e-93
AVG58271.1|1348388_1348574_+	hypothetical protein	NA	A0A1X9H0K5	Staphylococcus_phage	100.0	1.1e-24
AVG58272.1|1348609_1349314_+	hypothetical protein	NA	U5U4R0	Staphylococcus_phage	100.0	4.6e-127
AVG58273.1|1349510_1350557_+|integrase	site-specific integrase	integrase	A0A0H3U2V9	Staphylococcus_phage	100.0	4.2e-201
1354021:1354038	attR	TAATAATCCTTGATTAAC	NA	NA	NA	NA
>prophage 10
CP026960	Staphylococcus aureus strain FDAARGOS_15 chromosome, complete genome	2799899	2526476	2545410	2799899	protease,terminase,coat,integrase	Staphylococcus_phage(90.48%)	31	2528977:2528990	2545798:2545811
AVG59381.1|2526476_2526668_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
AVG59382.1|2526651_2526921_-	hypothetical protein	NA	NA	NA	NA	NA
AVG59383.1|2526911_2527208_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
AVG59384.1|2527228_2527732_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
AVG59385.1|2527783_2528026_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
AVG59386.1|2528264_2529164_-|protease	CAAX protease	protease	NA	NA	NA	NA
2528977:2528990	attL	AATTCAAAGTTATA	NA	NA	NA	NA
AVG59387.1|2529165_2530380_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	97.3	1.7e-222
AVG59388.1|2530405_2531329_-	XRE family transcriptional regulator	NA	Q4ZC20	Staphylococcus_virus	43.1	2.2e-07
AVG59389.1|2531435_2531636_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AVG59390.1|2531674_2531887_+	XRE family transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	71.4	3.0e-21
AVG59391.1|2531887_2532160_+	pathogenicity island protein	NA	Q4ZE77	Staphylococcus_phage	93.3	2.1e-43
AVG59392.1|2532171_2532318_+	pathogenicity island protein	NA	NA	NA	NA	NA
AVG59393.1|2532310_2532520_+	pathogenicity island protein	NA	Q4ZE76	Staphylococcus_phage	100.0	1.1e-31
AVG59394.1|2532522_2532828_+	DUF1474 domain-containing protein	NA	Q4ZE75	Staphylococcus_phage	89.1	6.2e-44
AVG59395.1|2532902_2534516_+	phage resistance protein	NA	A0A1W6JPF4	Staphylococcus_phage	77.0	6.7e-246
AVG59396.1|2534686_2535490_+	DNA primase	NA	Q4ZE69	Staphylococcus_phage	99.6	3.5e-155
AVG59397.1|2535476_2535851_+	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	80.3	9.0e-29
AVG59398.1|2536129_2536492_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
AVG59399.1|2536493_2536778_+	pathogenicity island protein	NA	A0A1W6JQE4	Staphylococcus_phage	94.7	9.4e-47
AVG59400.1|2536774_2537416_+	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	92.5	1.5e-108
AVG59401.1|2537952_2538294_+	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
AVG59402.1|2538324_2538978_+	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	99.1	1.3e-115
AVG59403.1|2539030_2539558_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	94.9	1.7e-86
AVG59723.1|2539689_2539902_+	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	97.1	3.2e-31
AVG59404.1|2539898_2540468_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
AVG59405.1|2540896_2541415_+	pathogenicity island protein	NA	NA	NA	NA	NA
AVG59406.1|2541411_2541840_+	hypothetical protein	NA	NA	NA	NA	NA
AVG59407.1|2541826_2542606_+	pathogenicity island protein	NA	NA	NA	NA	NA
AVG59408.1|2542785_2543070_+	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	63.0	2.4e-26
AVG59724.1|2544121_2545060_-|protease	CAAX protease	protease	NA	NA	NA	NA
AVG59409.1|2545098_2545410_-|integrase	integrase	integrase	Q4ZE80	Staphylococcus_phage	70.5	5.5e-24
2545798:2545811	attR	TATAACTTTGAATT	NA	NA	NA	NA
