The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	819	25320	2877716	integrase	Staphylococcus_phage(80.0%)	41	3395:3411	30451:30467
AUU68763.1|819_2196_-	ATP-dependent helicase	NA	Q4ZCF6	Staphylococcus_virus	99.3	1.9e-262
AUU68764.1|2176_2467_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
AUU68765.1|2600_2705_+	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	100.0	9.4e-13
AUU68766.1|2807_5255_-	hypothetical protein	NA	Q4ZCG0	Staphylococcus_virus	99.9	0.0e+00
3395:3411	attL	TTGTACCAATGAAAATA	NA	NA	NA	NA
AUU68767.1|5306_5507_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AUU68768.1|5574_5742_-	transcriptional regulator	NA	A0A2I6PF16	Staphylococcus_phage	100.0	2.1e-22
AUU68769.1|5729_5930_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
AUU68770.1|5904_6093_-	DUF1381 domain-containing protein	NA	Q4ZCG4	Staphylococcus_virus	100.0	1.6e-26
AUU68771.1|6129_6672_-	dUTP pyrophosphatase	NA	Q4ZD81	Staphylococcus_virus	100.0	1.5e-96
AUU68772.1|6676_6913_-	hypothetical protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
AUU68773.1|6905_7214_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
AUU68774.1|7210_7558_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
AUU68775.1|7554_7956_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	100.0	7.0e-72
AUU68776.1|7958_8165_-	hypothetical protein	NA	A0A0N9BAW9	Staphylococcus_phage	100.0	3.0e-34
AUU68777.1|8178_8427_-	hypothetical protein	NA	Q8SDR2	Staphylococcus_virus	100.0	1.8e-41
AUU68778.1|8435_8636_-	hypothetical protein	NA	A0A2I6PF32	Staphylococcus_phage	100.0	1.3e-29
AUU68779.1|8638_8896_-	DUF3310 domain-containing protein	NA	A0A2I6PF10	Staphylococcus_phage	100.0	5.7e-43
AUU68780.1|8895_9297_-	PVL family protein	NA	A0A2I6PF14	Staphylococcus_phage	100.0	1.2e-68
AUU68781.1|9296_9482_-	DUF3113 domain-containing protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AUU71516.1|9494_11447_-	DNA polymerase	NA	A0A2I6PF18	Staphylococcus_phage	100.0	0.0e+00
AUU68782.1|11515_12073_-	DUF2815 domain-containing protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
AUU68783.1|12098_13265_-	DUF2800 domain-containing protein	NA	A0A2D1G5B8	Staphylococcus_phage	99.7	1.2e-220
AUU68784.1|13261_13624_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	100.0	4.9e-56
AUU68785.1|13638_13962_-	TrmB family transcriptional regulator	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
AUU68786.1|14040_14202_-	DUF1270 domain-containing protein	NA	A0A2I6PEZ9	Staphylococcus_phage	100.0	5.0e-21
AUU68787.1|14214_14478_-	helix-turn-helix domain-containing protein	NA	A0A2I6PDM6	Staphylococcus_phage	100.0	1.1e-44
AUU68788.1|14502_14718_-	hypothetical protein	NA	A0A2I6PDN5	Staphylococcus_phage	100.0	1.3e-32
AUU68789.1|14772_15138_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AUU68790.1|15106_15352_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AUU68791.1|15367_15616_-	XRE family transcriptional regulator	NA	A0A2I6PED6	Staphylococcus_phage	100.0	2.2e-39
AUU68792.1|15779_16103_+	XRE family transcriptional regulator	NA	R4WAK9	Staphylococcus_phage	100.0	9.1e-54
AUU68793.1|16115_16577_+	toxin	NA	R4WEA5	Staphylococcus_phage	99.3	1.6e-83
AUU68794.1|16593_17028_+	hypothetical protein	NA	A0A2I6PED5	Staphylococcus_phage	100.0	1.1e-25
AUU68795.1|17056_17452_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	100.0	3.8e-70
AUU68796.1|17541_17688_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
AUU68797.1|17684_18299_-	ATPase	NA	A0A2I6PEZ0	Staphylococcus_phage	99.5	2.5e-105
AUU68798.1|18424_19630_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AUU68799.1|19672_21700_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	99.5	8.1e-116
AUU68800.1|21692_22619_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
AUU68801.1|22862_24614_-	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
AUU68802.1|24594_25320_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
30451:30467	attR	TATTTTCATTGGTACAA	NA	NA	NA	NA
>prophage 2
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	160277	169320	2877716	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AUU68945.1|160277_160796_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AUU68946.1|160817_163091_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
AUU68947.1|163293_165573_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AUU68948.1|165847_166108_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AUU68949.1|166126_167266_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AUU68950.1|167288_168314_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AUU68951.1|168315_169320_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 3
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	283348	354961	2877716	protease,tRNA	Staphylococcus_phage(95.74%)	67	NA	NA
AUU69057.1|283348_283993_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AUU69058.1|284007_284799_-	phosphotransferase	NA	NA	NA	NA	NA
AUU69059.1|285348_286197_-	D-amino-acid transaminase	NA	NA	NA	NA	NA
AUU69060.1|286200_287610_-	dipeptidase PepV	NA	NA	NA	NA	NA
AUU69061.1|288167_288590_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
AUU69062.1|288606_289302_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AUU69063.1|289298_290960_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AUU69064.1|291366_292635_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
AUU69065.1|292751_299312_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
AUU69066.1|299637_299949_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
AUU69067.1|299970_302388_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
AUU69068.1|302675_303857_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.5	2.1e-217
AUU69069.1|303966_304920_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AUU69070.1|304916_305480_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AUU69071.1|305602_306004_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUU69072.1|306575_307403_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUU69073.1|307405_307525_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69074.1|307636_308638_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
AUU69075.1|308759_309224_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
AUU69076.1|309236_310418_-	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
AUU69077.1|310428_311061_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
AUU71524.1|311067_312099_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
AUU69078.1|312591_314094_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
AUU69079.1|314616_314931_+	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
AUU69080.1|314930_316223_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AUU69081.1|316309_317164_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AUU69082.1|317439_317664_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69083.1|317862_318333_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
AUU69084.1|318445_318889_+	competence protein ComK	NA	NA	NA	NA	NA
AUU69085.1|318875_319319_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AUU69086.1|319614_320250_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AUU69087.1|320689_321403_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AUU69088.1|321662_321965_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69089.1|322220_322586_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AUU69090.1|322582_322936_+	camphor resistance protein CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
AUU69091.1|324932_325766_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
AUU69092.1|325977_326886_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
AUU69093.1|327007_328204_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
AUU69094.1|328575_330168_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AUU71525.1|330545_331292_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	5.4e-142
AUU69095.1|331296_331770_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
AUU69096.1|331835_332093_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AUU69097.1|332089_333091_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
AUU69098.1|333095_334574_-	2-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
AUU71526.1|334732_335188_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
AUU69099.1|335490_336141_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
AUU69100.1|336221_337217_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
AUU69101.1|337291_337918_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
AUU69102.1|337958_338300_+	DUF3969 domain-containing protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
AUU69103.1|338400_338973_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
AUU69104.1|340545_340647_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69105.1|341722_342952_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
AUU69106.1|342944_344684_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
AUU69107.1|344664_344799_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69108.1|344861_345581_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
AUU69109.1|345682_345790_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69110.1|345738_346458_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AUU69111.1|346578_347298_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
AUU69112.1|347355_348078_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
AUU69113.1|348202_348910_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
AUU69114.1|349345_349564_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69115.1|349873_350455_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
AUU69116.1|350927_351146_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
AUU69117.1|351401_351875_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69118.1|351879_352671_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AUU69119.1|353040_354024_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
AUU69120.1|354025_354961_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 4
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	361161	408941	2877716	tail,holin,head,terminase,portal,capsid,integrase,plate	Staphylococcus_phage(60.81%)	74	365639:365654	409003:409018
AUU69126.1|361161_361917_-	exotoxin	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
AUU69127.1|361955_362351_-	enterotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	50.4	1.5e-26
AUU69128.1|362325_362727_-	enterotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	37.9	1.5e-10
AUU69129.1|362880_363609_-	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
AUU69130.1|363643_364363_-	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
AUU69131.1|364643_365408_-	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	37.1	2.3e-31
365639:365654	attL	ACGGAGAGTGAGGGAT	NA	NA	NA	NA
AUU69132.1|365810_366011_-	hypothetical protein	NA	A0A2H4PQS9	Staphylococcus_phage	100.0	3.5e-32
AUU69133.1|366024_366231_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	100.0	3.4e-30
AUU69134.1|366927_367128_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
AUU69135.1|367114_367225_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
AUU69136.1|367295_367448_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
AUU69137.1|367591_369004_-	CHAP domain-containing protein	NA	A0A2H4PQS4	Staphylococcus_phage	99.6	2.9e-285
AUU69138.1|368990_369266_-|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
AUU69139.1|369321_369717_-	hypothetical protein	NA	A0A0F6N3G8	Staphylococcus_phage	100.0	1.2e-68
AUU69140.1|369722_370961_-	DUF2479 domain-containing protein	NA	A0A0F6N3G7	Staphylococcus_phage	99.3	8.5e-209
AUU69141.1|370973_372848_-	CHAP domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	100.0	0.0e+00
AUU69142.1|372984_373284_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AUU71527.1|373324_373498_-	XkdX family protein	NA	A0A059T7K6	Staphylococcus_phage	100.0	1.3e-27
AUU69143.1|373501_373879_-	DUF2977 domain-containing protein	NA	A0EWU4	Staphylococcus_virus	100.0	5.6e-55
AUU69144.1|373878_375702_-|plate	phage baseplate upper protein	plate	Q4ZDD5	Staphylococcus_virus	96.7	1.4e-287
AUU69145.1|375701_377600_-	hypothetical protein	NA	A0A2H4JCV8	uncultured_Caudovirales_phage	98.6	0.0e+00
AUU69146.1|377612_379499_-	peptidase	NA	A7YGW3	Staphylococcus_virus	99.7	0.0e+00
AUU69147.1|379509_380445_-|tail	phage tail protein	tail	A7YGW1	Staphylococcus_virus	100.0	3.7e-180
AUU69148.1|380459_383603_-|terminase	terminase	terminase	Q4ZB30	Staphylococcus_virus	99.6	1.5e-305
AUU69149.1|383605_383947_-	hypothetical protein	NA	W5R8J4	Staphylococcus_phage	100.0	3.5e-56
AUU69150.1|383967_384462_-	hypothetical protein	NA	A7YGV7	Staphylococcus_virus	100.0	2.5e-87
AUU69151.1|384523_385084_-|tail	phage tail protein	tail	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
AUU69152.1|385070_385508_-	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	99.3	4.6e-77
AUU69153.1|385520_385934_-	hypothetical protein	NA	A0A0E3XCY8	Staphylococcus_phage	100.0	1.5e-77
AUU69154.1|385920_386256_-|head,tail	phage head-tail adapter protein	head,tail	A7YGU9	Staphylococcus_virus	99.1	3.0e-60
AUU69155.1|386248_386563_-|head,tail	phage head-tail adapter protein	head,tail	A7YGU8	Staphylococcus_virus	97.1	2.4e-51
AUU69156.1|386562_386889_-	Rho termination protein	NA	Q4ZAA2	Staphylococcus_virus	100.0	5.6e-51
AUU69157.1|386905_387718_-|capsid	major capsid protein	capsid	Q4ZAA4	Staphylococcus_virus	99.6	3.1e-143
AUU69158.1|387734_388325_-	hypothetical protein	NA	A0A0H4IP83	Staphylococcus_phage	83.7	9.4e-81
AUU69159.1|388422_389403_-|head	phage head morphogenesis protein	head	A0A0E3XC69	Staphylococcus_phage	98.8	1.1e-179
AUU69160.1|389341_390820_-|portal	phage portal protein	portal	A0A2H4PQK7	Staphylococcus_phage	100.0	7.9e-286
AUU69161.1|390773_391982_-|terminase	PBSX family phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	99.8	2.3e-235
AUU71528.1|391974_392292_-	hypothetical protein	NA	A0A2I6PCU5	Staphylococcus_phage	95.2	7.3e-48
AUU69162.1|392819_393221_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
AUU69163.1|393221_393395_-	transcriptional regulator	NA	A0A0H3U4U1	Staphylococcus_phage	98.2	4.9e-22
AUU69164.1|393391_393757_-	hypothetical protein	NA	A0A0N9BB01	Staphylococcus_phage	97.5	3.6e-59
AUU69165.1|393771_394008_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
AUU69166.1|394000_394204_-	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
AUU69167.1|394200_394407_-	DUF1381 domain-containing protein	NA	Q4ZDP2	Staphylococcus_virus	95.6	2.4e-20
AUU69168.1|394403_394649_-	hypothetical protein	NA	Q9B0F1	Staphylococcus_virus	93.8	2.9e-28
AUU69169.1|394685_395219_-	dUTPase	NA	Q4ZBS9	Staphylococcus_virus	98.9	5.1e-94
AUU69170.1|395395_395677_-	hypothetical protein	NA	A0A2I6PDX3	Staphylococcus_phage	100.0	8.5e-48
AUU69171.1|395840_396092_-	DUF1024 domain-containing protein	NA	E0Y3Q8	Staphylococcus_virus	91.6	1.2e-34
AUU69172.1|396106_396355_-	hypothetical protein	NA	A7TWA8	Staphylococcus_phage	95.1	7.5e-40
AUU69173.1|396355_396715_-	hypothetical protein	NA	B2ZYW3	Staphylococcus_phage	96.6	2.1e-59
AUU69174.1|396726_396984_-	XRE family transcriptional regulator	NA	Q4ZBU1	Staphylococcus_virus	100.0	4.1e-41
AUU69175.1|396984_397170_-	DUF3113 domain-containing protein	NA	Q8SDV9	Staphylococcus_phage	96.7	1.6e-26
AUU69176.1|397174_397561_-	DUF1064 domain-containing protein	NA	A0A2I6PDA8	Staphylococcus_phage	99.2	4.1e-69
AUU69177.1|397557_397983_-	adenine methyltransferase	NA	Q4ZAC6	Staphylococcus_virus	100.0	8.0e-82
AUU69178.1|397992_398214_-	hypothetical protein	NA	Q4ZA48	Staphylococcus_virus	100.0	1.7e-35
AUU69179.1|398217_398433_-	hypothetical protein	NA	Q4ZBU5	Staphylococcus_virus	100.0	4.8e-35
AUU69180.1|398429_399671_-	damage-inducible protein	NA	C8CGZ3	Staphylococcus_phage	100.0	2.6e-229
AUU69181.1|399667_400024_-	hypothetical protein	NA	B7T0A8	Staphylococcus_virus	97.5	2.2e-61
AUU69182.1|400023_400830_-	replication protein	NA	Q8SDW2	Staphylococcus_phage	100.0	2.1e-107
AUU69183.1|400801_401494_-	hypothetical protein	NA	Q4ZAZ0	Staphylococcus_virus	99.1	5.2e-131
AUU71529.1|401506_402007_-	single-strand DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	100.0	7.2e-90
AUU69184.1|402090_402870_-	chromosomal replication initiator DnaA	NA	Q8SDW5	Staphylococcus_phage	100.0	2.5e-142
AUU69185.1|402870_403407_-	hypothetical protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
AUU69186.1|403419_403740_-	DUF1108 domain-containing protein	NA	Q8SDW6	Staphylococcus_phage	95.3	2.7e-50
AUU69187.1|403660_403990_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	100.0	1.4e-33
AUU69188.1|404082_404244_-	DUF1270 domain-containing protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
AUU69189.1|404257_404467_-	hypothetical protein	NA	A7YGP3	Staphylococcus_virus	100.0	7.4e-33
AUU69190.1|404491_405217_-	phage repressor protein	NA	A0A2H4PQQ3	Staphylococcus_phage	98.8	9.3e-131
AUU69191.1|405232_405451_-	XRE family transcriptional regulator	NA	Q8SDX1	Staphylococcus_phage	100.0	2.9e-35
AUU69192.1|405592_406312_+	XRE family transcriptional regulator	NA	A0A2H4PQQ2	Staphylococcus_phage	100.0	1.3e-132
AUU69193.1|406381_406549_+	hypothetical protein	NA	Q4ZDJ4	Staphylococcus_virus	100.0	1.7e-24
AUU69194.1|406688_407621_+	hypothetical protein	NA	A0EX19	Staphylococcus_virus	100.0	6.7e-174
AUU69195.1|407600_407780_-	excisionase	NA	Q4ZBP0	Staphylococcus_phage	100.0	3.7e-25
AUU69196.1|407891_408941_+|integrase	site-specific integrase	integrase	A0A2H4JB53	uncultured_Caudovirales_phage	90.3	5.2e-183
409003:409018	attR	ACGGAGAGTGAGGGAT	NA	NA	NA	NA
>prophage 5
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	503277	585998	2877716	tail,holin,head,terminase,protease,portal,capsid,integrase	Staphylococcus_phage(87.84%)	103	552925:552942	577138:577155
AUU69280.1|503277_504444_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
AUU69281.1|504474_504801_+	staphostatin A	NA	NA	NA	NA	NA
AUU69282.1|505092_505266_-	NETI motif-containing protein	NA	NA	NA	NA	NA
AUU69283.1|505246_505849_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
AUU69284.1|506119_506941_-	NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
AUU69285.1|506933_508403_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
AUU69286.1|508586_509663_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
AUU69287.1|509682_510477_+	ACT domain-containing protein	NA	NA	NA	NA	NA
AUU69288.1|510548_510656_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69289.1|510666_512229_-	sodium-dependent dicarboxylate transporter SdcS	NA	NA	NA	NA	NA
AUU69290.1|512433_513531_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
AUU69291.1|513899_514460_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
AUU69292.1|514512_515442_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
AUU69293.1|515634_515808_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69294.1|515859_517239_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AUU69295.1|517358_518387_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69296.1|518656_519058_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
AUU69297.1|519630_519804_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69298.1|520254_521295_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
AUU69299.1|521351_522194_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69300.1|522190_522748_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
AUU69301.1|522807_523332_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69302.1|523452_524016_+	thioredoxin family protein	NA	NA	NA	NA	NA
AUU69303.1|524081_524822_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
AUU69304.1|524821_525694_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
AUU69305.1|525690_526371_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
AUU69306.1|526371_527268_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
AUU69307.1|527264_527645_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AUU69308.1|527902_528079_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69309.1|528321_528420_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69310.1|528619_529906_+	aspartate aminotransferase	NA	NA	NA	NA	NA
AUU69311.1|530184_530475_-	MAP domain-containing protein	NA	NA	NA	NA	NA
AUU69312.1|530485_531919_-	MAP domain-containing protein	NA	NA	NA	NA	NA
AUU69313.1|532304_532505_+	hypothetical protein	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
AUU69314.1|532876_533056_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
AUU69315.1|533079_533388_+	hypothetical protein	NA	M9NTD8	Staphylococcus_phage	77.5	9.3e-24
AUU69316.1|533366_533627_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
AUU69317.1|533679_534030_-	inhibitor	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
AUU69318.1|534712_535162_+	chemotaxis inhibitory protein	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
AUU69319.1|536241_536733_-	staphylokinase	NA	A0A075LYD3	Staphylococcus_phage	100.0	8.0e-86
AUU69320.1|536923_537679_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	99.2	2.9e-151
AUU69321.1|537690_537945_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AUU71533.1|538156_538333_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	96.6	3.8e-22
AUU69322.1|538441_539215_-	enterotoxin	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
AUU69323.1|539587_539962_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
AUU69324.1|540017_540305_-	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
AUU69325.1|540350_540503_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
AUU69326.1|540495_544278_-	hypothetical protein	NA	A0A1V0E5H3	Staphylococcus_phage	99.6	0.0e+00
AUU69327.1|544293_545778_-|tail	phage tail protein	tail	A0A068A242	Staphylococcus_phage	100.0	1.5e-297
AUU69328.1|545774_550319_-|tail	phage tail tape measure protein	tail	A0A075M036	Staphylococcus_phage	98.5	0.0e+00
AUU69329.1|550563_550914_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
AUU69330.1|550963_551188_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
AUU69331.1|551229_551874_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
AUU69332.1|551874_552282_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
AUU69333.1|552278_552683_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
AUU69334.1|552679_553042_-|head,tail	phage head-tail adapter protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
552925:552942	attL	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
AUU69335.1|553025_553310_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
AUU69336.1|553299_553584_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
AUU69337.1|553603_554749_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
AUU69338.1|554772_555510_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
AUU69339.1|555493_556681_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
AUU69340.1|556696_558358_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	99.5	0.0e+00
AUU69341.1|558354_558699_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
AUU69342.1|558828_559128_-	HNH endonuclease	NA	G4KNP8	Staphylococcus_phage	100.0	4.6e-52
AUU69343.1|559359_559776_-	transcriptional regulator	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
AUU69344.1|559803_560004_-	hypothetical protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
AUU69345.1|560003_560654_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
AUU69346.1|560812_560962_-	transcriptional regulator	NA	A0A1W6JPZ2	Staphylococcus_phage	98.0	1.1e-17
AUU69347.1|560958_561165_-	DUF1381 domain-containing protein	NA	B7T0C2	Staphylococcus_virus	95.6	3.5e-19
AUU69348.1|561161_561407_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
AUU69349.1|561443_561980_-	dUTPase	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
AUU69350.1|561979_562165_-	hypothetical protein	NA	A0A0E3T9L7	Staphylococcus_phage	90.2	1.8e-22
AUU69351.1|562127_562337_-	DUF1024 domain-containing protein	NA	A0A0H3U2T3	Staphylococcus_phage	75.4	1.0e-21
AUU69352.1|562762_562981_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
AUU69353.1|562987_563881_-	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
AUU69354.1|563910_564381_-	single-stranded DNA-binding protein	NA	A0A0E3T9H6	Staphylococcus_phage	99.4	7.4e-81
AUU69355.1|564381_565014_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.4e-87
AUU69356.1|565079_566000_-	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	99.0	7.3e-165
AUU69357.1|566001_567945_-	ATPase	NA	I1W619	Staphylococcus_phage	96.4	0.0e+00
AUU69358.1|567953_568217_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
AUU69359.1|568225_568486_-	DUF1108 domain-containing protein	NA	A0EWW8	Staphylococcus_phage	96.5	1.9e-41
AUU69360.1|568506_568794_-	hypothetical protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	3.2e-42
AUU69361.1|568887_569049_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	98.1	7.2e-20
AUU69362.1|569045_569366_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
AUU69363.1|569420_569801_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
AUU69364.1|569787_569985_-	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
AUU69365.1|570000_570756_-	oxidoreductase	NA	A0A1P8L6G2	Staphylococcus_phage	99.6	4.3e-139
AUU69366.1|570812_571352_+	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
AUU69367.1|571375_571636_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
AUU69368.1|571648_571888_-	XRE family transcriptional regulator	NA	Q9MBT3	Staphylococcus_prophage	100.0	8.0e-39
AUU69369.1|572058_572766_+	XRE family transcriptional regulator	NA	G4KNM8	Staphylococcus_phage	100.0	7.7e-130
AUU69370.1|572920_573106_+	hypothetical protein	NA	A0A1X9H0K5	Staphylococcus_phage	100.0	1.1e-24
AUU69371.1|573305_573473_+	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	100.0	6.6e-24
AUU71534.1|573770_574844_+|protease	CAAX protease	protease	A0A2H4JB40	uncultured_Caudovirales_phage	49.0	9.0e-82
AUU69372.1|574904_575942_+|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	99.7	5.9e-179
AUU69373.1|575998_576823_+	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
AUU69374.1|577060_578077_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
577138:577155	attR	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
AUU69375.1|578098_579154_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
AUU69376.1|579589_580813_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AUU69377.1|581256_582564_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
AUU69378.1|583103_584720_-	molecular chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
AUU69379.1|584795_585080_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
AUU69380.1|585254_585998_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 6
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	709455	810965	2877716	tail,holin,head,terminase,protease,portal,capsid,integrase	Staphylococcus_phage(74.29%)	103	771545:771560	812732:812747
AUU69503.1|709455_709614_+|integrase	integrase	integrase	NA	NA	NA	NA
AUU69504.1|710050_710143_+	erm Leader peptide	NA	NA	NA	NA	NA
AUU69505.1|710271_711129_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AUU69506.1|711196_711979_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
AUU69507.1|712210_714016_-	glutamine--fructose-6-phosphate aminotransferase	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
AUU69508.1|714696_716235_+	PTS mannitol transporter subunit IICB	NA	NA	NA	NA	NA
AUU69509.1|716269_718402_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AUU69510.1|718413_718848_+	mannitol-specific phosphotransferase enzyme IIA component	NA	NA	NA	NA	NA
AUU69511.1|718847_719954_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
AUU69512.1|720272_727718_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	31.5	3.9e-22
AUU69513.1|727995_729351_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AUU69514.1|729377_730310_-	YbbR-like domain-containing protein	NA	NA	NA	NA	NA
AUU69515.1|730311_731121_-	TIGR00159 family protein	NA	NA	NA	NA	NA
AUU69516.1|731309_732218_-	arginase	NA	A0A1V0SJM8	Klosneuvirus	31.6	4.1e-27
AUU69517.1|738458_739523_-	chromosome partitioning protein ParA	NA	NA	NA	NA	NA
AUU69518.1|739670_741113_-	MFS transporter	NA	NA	NA	NA	NA
AUU69519.1|741435_741909_-	multidrug resistance efflux pump SepA	NA	NA	NA	NA	NA
AUU69520.1|742007_743351_-	MFS transporter	NA	NA	NA	NA	NA
AUU69521.1|743527_744211_-	hemolysin III	NA	NA	NA	NA	NA
AUU69522.1|744229_745417_-	uridylyltransferase	NA	NA	NA	NA	NA
AUU69523.1|745460_745976_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AUU69524.1|746152_746413_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69525.1|746544_747915_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69526.1|748150_749119_-	iron-dicitrate transporter subunit FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
AUU69527.1|749115_750147_-	iron-siderophore ABC transporter permease	NA	NA	NA	NA	NA
AUU69528.1|750158_751142_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUU69529.1|751307_751433_+	hypothetical protein	NA	NA	NA	NA	NA
AUU69530.1|751533_752604_-	alanine racemase	NA	NA	NA	NA	NA
AUU69531.1|752610_754368_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AUU69532.1|754354_755548_-	MFS transporter	NA	NA	NA	NA	NA
AUU69533.1|755649_757626_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AUU69534.1|757786_758296_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
AUU69535.1|758358_758598_-	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
AUU69536.1|758610_759147_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
AUU69537.1|759321_760884_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
AUU69538.1|761191_762199_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AUU69539.1|762433_763435_-	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
AUU69540.1|763712_764597_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUU69541.1|765649_765841_-	hypothetical protein	NA	Q4ZCJ7	Staphylococcus_virus	98.1	7.5e-24
AUU69542.1|766085_766922_-	hypothetical protein	NA	D2JLG6	Staphylococcus_phage	100.0	8.4e-152
AUU69543.1|767157_767340_-	hypothetical protein	NA	NA	NA	NA	NA
AUU69544.1|767537_768992_-	CHAP domain-containing protein	NA	Q8SDN4	Staphylococcus_virus	99.8	7.5e-289
AUU69545.1|769002_769305_-|holin	phage holin	holin	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
AUU69546.1|769440_769740_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AUU69547.1|769785_769950_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AUU69548.1|769942_770332_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AUU69549.1|770331_771798_-	hypothetical protein	NA	Q8SDN8	Staphylococcus_virus	100.0	3.4e-257
771545:771560	attL	AATTTTAAAATACCTT	NA	NA	NA	NA
AUU69550.1|771797_773708_-	hypothetical protein	NA	A0A2I6PF35	Staphylococcus_phage	100.0	0.0e+00
AUU69551.1|773723_774014_-	hypothetical protein	NA	Q8SDP0	Staphylococcus_virus	100.0	2.1e-49
AUU69552.1|774013_775597_-	peptidase	NA	Q8SDP1	Staphylococcus_virus	99.8	1.2e-308
AUU69553.1|775605_776430_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AUU69554.1|776429_782630_-|tail	phage tail tape measure protein	tail	U5U762	Staphylococcus_phage	99.3	0.0e+00
AUU69555.1|782643_782802_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AUU69556.1|782843_783194_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AUU69557.1|783251_783707_-|tail	phage tail protein	tail	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
AUU69558.1|783798_784440_-|tail	phage tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AUU69559.1|784474_784870_-	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
AUU69560.1|784870_785272_-	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
AUU69561.1|785268_785601_-	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
AUU69562.1|785612_785891_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AUU71540.1|785959_787123_-|capsid	phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
AUU69563.1|787134_787908_-|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
AUU69564.1|787891_789130_-|portal	phage portal protein	portal	A0A2I6PF26	Staphylococcus_phage	100.0	1.2e-234
AUU69565.1|789134_790826_-|terminase	terminase large subunit	terminase	Q4ZD20	Staphylococcus_virus	100.0	0.0e+00
AUU69566.1|790815_791121_-|terminase	phage terminase small subunit P27 family	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
AUU69567.1|791242_791557_-	HNH endonuclease	NA	Q8SDQ2	Staphylococcus_virus	100.0	1.9e-56
AUU69568.1|791713_792151_-	transcriptional regulator	NA	A0A2K9VBV2	Staphylococcus_phage	99.3	7.9e-77
AUU69569.1|792163_793540_-	ATP-dependent helicase	NA	Q4ZCF6	Staphylococcus_virus	99.3	1.9e-262
AUU69570.1|793520_793811_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
AUU69571.1|793944_794049_+	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	97.1	1.4e-11
AUU69572.1|794151_796599_-	hypothetical protein	NA	Q4ZCG0	Staphylococcus_virus	99.9	0.0e+00
AUU69573.1|796650_796851_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AUU69574.1|796918_797086_-	transcriptional regulator	NA	A0A2I6PF16	Staphylococcus_phage	100.0	2.1e-22
AUU69575.1|797073_797274_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
AUU69576.1|797248_797437_-	DUF1381 domain-containing protein	NA	Q4ZCG4	Staphylococcus_virus	100.0	1.6e-26
AUU69577.1|797473_798016_-	dUTP pyrophosphatase	NA	Q4ZD81	Staphylococcus_virus	100.0	1.5e-96
AUU69578.1|798020_798257_-	hypothetical protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
AUU69579.1|798249_798558_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
AUU69580.1|798554_798902_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
AUU69581.1|798898_799303_-	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
AUU69582.1|799316_799565_-	hypothetical protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.2e-40
AUU69583.1|799564_799819_-	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	97.6	2.6e-40
AUU69584.1|799818_800436_-	hypothetical protein	NA	A0A0H3U4U9	Staphylococcus_phage	100.0	1.6e-83
AUU69585.1|800436_800622_-	hypothetical protein	NA	A0A1X9H053	Staphylococcus_phage	96.7	1.6e-26
AUU69586.1|800621_800777_-	transcriptional regulator	NA	A0A2I6PDP0	Staphylococcus_phage	94.1	3.5e-19
AUU71541.1|800788_802741_-	DNA polymerase	NA	A0A2I6PF18	Staphylococcus_phage	99.7	0.0e+00
AUU69587.1|802809_803367_-	DUF2815 domain-containing protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
AUU69588.1|803392_804559_-	DUF2800 domain-containing protein	NA	R4WAL0	Staphylococcus_phage	99.0	1.1e-218
AUU69589.1|804555_804918_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	97.5	9.2e-55
AUU69590.1|804932_805256_-	TrmB family transcriptional regulator	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
AUU69591.1|805334_805496_-	DUF1270 domain-containing protein	NA	A0A2I6PEZ9	Staphylococcus_phage	100.0	5.0e-21
AUU69592.1|805508_805772_-	helix-turn-helix domain-containing protein	NA	A0A2I6PDM6	Staphylococcus_phage	100.0	1.1e-44
AUU69593.1|805796_806012_-	hypothetical protein	NA	A0A2I6PDN5	Staphylococcus_phage	97.2	1.4e-31
AUU69594.1|806066_806432_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AUU69595.1|806400_806646_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AUU69596.1|806665_806890_-	DUF739 domain-containing protein	NA	A0A2I6PE94	Staphylococcus_phage	100.0	2.7e-36
AUU69597.1|807051_807432_+	transcriptional regulator	NA	A0A2I6PE55	Staphylococcus_phage	99.2	1.5e-63
AUU69598.1|807453_807912_+	toxin	NA	B2ZYU2	Staphylococcus_phage	98.0	2.3e-82
AUU69599.1|807928_808363_+	hypothetical protein	NA	A0A2D1G561	Staphylococcus_phage	99.3	1.4e-25
AUU69600.1|808391_808787_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	100.0	3.8e-70
AUU69601.1|808876_809023_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
AUU69602.1|809019_809634_-	ATPase	NA	A0A2I6PEZ0	Staphylococcus_phage	99.5	2.5e-105
AUU69603.1|809759_810965_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
812732:812747	attR	AATTTTAAAATACCTT	NA	NA	NA	NA
>prophage 7
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	1740833	1754556	2877716	integrase,terminase,coat	Staphylococcus_phage(88.89%)	23	1733925:1733940	1755722:1755737
1733925:1733940	attL	ATTTTCAATATCTAAT	NA	NA	NA	NA
AUU70461.1|1740833_1741025_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
AUU70462.1|1741008_1741278_-	hypothetical protein	NA	NA	NA	NA	NA
AUU70463.1|1741268_1741565_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
AUU70464.1|1741585_1742089_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
AUU70465.1|1742140_1742383_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
AUU70466.1|1742498_1743605_-	hypothetical protein	NA	X2L062	Streptococcus_phage	22.6	2.6e-07
AUU70467.1|1743785_1744997_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	97.0	4.3e-221
AUU70468.1|1745452_1746148_-	XRE family transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	62.5	2.3e-09
AUU70469.1|1746291_1746504_+	XRE family transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	61.4	2.6e-17
AUU70470.1|1746504_1746777_+	pathogenicity island protein	NA	Q4ZE77	Staphylococcus_phage	92.2	3.9e-42
AUU71581.1|1746788_1746935_+	pathogenicity island protein	NA	NA	NA	NA	NA
AUU70471.1|1746927_1747137_+	pathogenicity island protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
AUU70472.1|1747139_1747463_+	pathogenicity island protein	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	6.6e-20
AUU70473.1|1747527_1748397_+	mobile element-associated protein	NA	Q4ZE74	Staphylococcus_phage	95.8	2.6e-164
AUU70474.1|1748410_1750120_+	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	99.5	0.0e+00
AUU70475.1|1750432_1750813_+	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	99.2	2.6e-68
AUU70476.1|1750809_1751451_+	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	92.5	5.5e-111
AUU70477.1|1751900_1752242_+	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
AUU70478.1|1752253_1752832_+	pathogenicity island protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
AUU70479.1|1752849_1753068_+	hypothetical protein	NA	NA	NA	NA	NA
AUU70480.1|1753118_1753646_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	96.0	3.5e-87
AUU71582.1|1753777_1753990_+	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
AUU70481.1|1753986_1754556_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.4	3.5e-101
1755722:1755737	attR	ATTAGATATTGAAAAT	NA	NA	NA	NA
>prophage 8
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	2103076	2110897	2877716		Hokovirus(16.67%)	10	NA	NA
AUU70802.1|2103076_2104132_-	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
AUU70803.1|2104131_2104818_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AUU70804.1|2104792_2105266_-	DoxX family protein	NA	NA	NA	NA	NA
AUU70805.1|2105608_2106049_-	hypothetical protein	NA	NA	NA	NA	NA
AUU70806.1|2106328_2106913_-	hypothetical protein	NA	NA	NA	NA	NA
AUU70807.1|2107011_2107725_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AUU70808.1|2107728_2108148_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AUU70809.1|2108149_2108818_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AUU70810.1|2109168_2109762_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AUU70811.1|2109745_2110897_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 9
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	2122868	2137511	2877716		uncultured_Caudovirales_phage(50.0%)	17	NA	NA
AUU70821.1|2122868_2123927_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AUU70822.1|2124265_2124808_+	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AUU70823.1|2124979_2125075_+	hypothetical protein	NA	NA	NA	NA	NA
AUU70824.1|2125250_2125418_+	nitrogen fixation protein NifR	NA	NA	NA	NA	NA
AUU70825.1|2125686_2126604_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
AUU70826.1|2126694_2126796_+	hypothetical protein	NA	NA	NA	NA	NA
AUU70827.1|2126873_2128379_-	peptide ABC transporter permease	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AUU70828.1|2128721_2129222_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AUU70829.1|2129241_2130108_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AUU70830.1|2130492_2130759_+	ribonucleoside-diphosphate reductase	NA	NA	NA	NA	NA
AUU70831.1|2130908_2131307_+	protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AUU70832.1|2131269_2133375_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AUU70833.1|2133492_2134464_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AUU70834.1|2134644_2134800_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71596.1|2134838_2135810_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AUU70835.1|2135796_2136753_+	iron ABC transporter permease	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AUU70836.1|2136749_2137511_+	iron ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 10
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	2310545	2364079	2877716	bacteriocin,transposase,holin,protease,tRNA	Streptococcus_phage(33.33%)	55	NA	NA
AUU71006.1|2310545_2311535_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AUU71007.1|2311828_2312224_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
AUU71008.1|2312428_2313748_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
AUU71009.1|2314114_2314834_+	adaptor protein MecA	NA	NA	NA	NA	NA
AUU71010.1|2314954_2315941_+	competence protein CoiA	NA	NA	NA	NA	NA
AUU71011.1|2315988_2317797_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
AUU71012.1|2318256_2319063_-	DsbA family protein	NA	NA	NA	NA	NA
AUU71013.1|2319085_2319451_-	globin	NA	NA	NA	NA	NA
AUU71014.1|2319554_2320148_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
AUU71015.1|2320333_2320681_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71016.1|2320697_2321333_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
AUU71017.1|2321349_2322159_+	NAD(+) kinase	NA	NA	NA	NA	NA
AUU71018.1|2322155_2323010_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AUU71019.1|2323030_2324416_+	magnesium transporter	NA	NA	NA	NA	NA
AUU71020.1|2324425_2326270_+	sodium:proton antiporter	NA	NA	NA	NA	NA
AUU71021.1|2326547_2327318_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AUU71022.1|2327514_2328600_-	AI-2E family transporter	NA	NA	NA	NA	NA
AUU71023.1|2328941_2330510_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
AUU71024.1|2330654_2331413_+	esterase family protein	NA	NA	NA	NA	NA
AUU71025.1|2331606_2332116_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71026.1|2332228_2333437_-	MFS transporter	NA	NA	NA	NA	NA
AUU71027.1|2333396_2334572_-	diacylglycerol beta-glucosyltransferase	NA	NA	NA	NA	NA
AUU71028.1|2335004_2336489_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
AUU71029.1|2336469_2336730_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71030.1|2336729_2338292_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
AUU71031.1|2338593_2339397_+	hypothetical protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
AUU71032.1|2339615_2341940_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	27.4	2.8e-11
AUU71033.1|2341956_2343315_+	Ktr system potassium uptake protein D	NA	NA	NA	NA	NA
AUU71034.1|2343453_2344965_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
AUU71035.1|2345451_2346021_-	competence protein ComK	NA	NA	NA	NA	NA
AUU71036.1|2346230_2346449_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
AUU71037.1|2346529_2347516_-	lipoate--protein ligase	NA	NA	NA	NA	NA
AUU71038.1|2347714_2347891_+	DUF2187 domain-containing protein	NA	NA	NA	NA	NA
AUU71039.1|2347905_2348508_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AUU71600.1|2348807_2348885_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
AUU71040.1|2349423_2349525_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71601.1|2349534_2349807_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
AUU71041.1|2349850_2351815_+	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
AUU71042.1|2351817_2352138_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71043.1|2352134_2352776_+|bacteriocin	bacteriocin ABC transporter ATP-binding protein	bacteriocin	G9BWD6	Planktothrix_phage	33.0	1.7e-19
AUU71044.1|2352863_2353154_-	hypothetical protein	NA	NA	NA	NA	NA
AUU71045.1|2353294_2353432_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
AUU71046.1|2353520_2353877_-	DoxX family protein	NA	NA	NA	NA	NA
AUU71047.1|2354364_2355324_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUU71048.1|2355369_2355501_-	hypothetical protein	NA	NA	NA	NA	NA
AUU71049.1|2355564_2355855_-	NINE protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
AUU71050.1|2355944_2356496_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUU71051.1|2356547_2357486_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
AUU71052.1|2357636_2357741_+	hypothetical protein	NA	NA	NA	NA	NA
AUU71053.1|2357817_2359029_+	isochorismate synthase	NA	NA	NA	NA	NA
AUU71054.1|2359015_2360689_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	NA	NA	NA	NA	NA
AUU71055.1|2360675_2361479_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
AUU71056.1|2361471_2362293_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
AUU71057.1|2362530_2362860_-	staphostatin B	NA	NA	NA	NA	NA
AUU71058.1|2362897_2364079_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 11
CP026074	Staphylococcus aureus strain HPV107 chromosome, complete genome	2877716	2384117	2392590	2877716		Synechococcus_phage(33.33%)	9	NA	NA
AUU71075.1|2384117_2384600_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
AUU71076.1|2384586_2385711_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AUU71077.1|2385714_2386419_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	1.6e-47
AUU71078.1|2386418_2386682_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AUU71079.1|2386683_2387355_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AUU71080.1|2387347_2389537_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.3e-140
AUU71081.1|2389515_2391000_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
AUU71082.1|2390992_2392021_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
AUU71083.1|2392023_2392590_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
