The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP012640	Massilia sp. WG5, complete sequence	6013801	17333	36315	6013801	terminase	Pseudomonas_phage(21.43%)	30	NA	NA
AWG45799.1|17333_19742_-	hypothetical protein	NA	H6BJ51	Methylophilales_phage	34.4	2.9e-88
ALK96988.1|19791_21045_-|terminase	terminase	terminase	L7TP33	Pseudomonas_virus	56.3	1.2e-128
AWG45800.1|21034_21445_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99543.2|21884_22289_-	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.4	1.6e-10
ALK96989.1|22263_22665_-	hypothetical protein	NA	NA	NA	NA	NA
ALK96990.1|22661_23093_-	endodeoxyribonuclease RusA	NA	A9YWY9	Burkholderia_phage	58.2	1.2e-37
ALK96991.1|23092_23356_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99544.2|24397_24994_-	hypothetical protein	NA	A0A068CBG2	Acinetobacter_phage	47.4	1.2e-30
ALK96992.1|24996_25206_-	hypothetical protein	NA	NA	NA	NA	NA
ALK96993.1|25202_25388_-	hypothetical protein	NA	NA	NA	NA	NA
AWG45801.1|25384_26044_-	hypothetical protein	NA	A0A1B0VMD9	Pseudomonas_phage	30.9	1.1e-10
AWG45802.1|26040_26922_-	hypothetical protein	NA	I3PUZ7	Vibrio_phage	47.9	9.9e-18
ALK96994.1|26921_27419_-	hypothetical protein	NA	NA	NA	NA	NA
ALK96995.1|27415_27616_-	hypothetical protein	NA	NA	NA	NA	NA
ALK96996.1|27813_28053_-	hypothetical protein	NA	NA	NA	NA	NA
ALK96997.1|28181_28370_-	hypothetical protein	NA	NA	NA	NA	NA
AWG45803.1|28493_29162_+	hypothetical protein	NA	A0A1W6JNY2	Morganella_phage	35.7	8.3e-17
ALK96998.1|29161_29602_+	hypothetical protein	NA	A0A0R6PHY1	Moraxella_phage	30.5	2.8e-05
ALK96999.1|30240_30516_-	hypothetical protein	NA	NA	NA	NA	NA
ALK97000.1|30735_31047_+	hypothetical protein	NA	NA	NA	NA	NA
ALK97001.1|31049_31400_+	hypothetical protein	NA	NA	NA	NA	NA
ALK97002.1|31421_31757_+	hypothetical protein	NA	NA	NA	NA	NA
AWG45804.1|31804_32044_+	hypothetical protein	NA	A0A125RNS0	Pseudomonas_phage	67.7	5.0e-17
ALK97003.1|32051_32234_+	hypothetical protein	NA	NA	NA	NA	NA
ALK97004.1|32541_33210_+	ATP-binding protein	NA	A0A2D1GLT5	Escherichia_phage	50.5	1.5e-55
ALK97005.1|33217_33850_+	hypothetical protein	NA	NA	NA	NA	NA
ALK97006.1|33888_34392_+	hypothetical protein	NA	R4IBM0	Listeria_phage	33.7	3.8e-14
ALK97007.1|34393_34855_+	hypothetical protein	NA	A0A0M3LPN2	Mannheimia_phage	37.9	8.8e-26
ALK97008.1|34856_35099_+	hypothetical protein	NA	NA	NA	NA	NA
ALK99545.1|35130_36315_+	phosphoadenosine phosphosulfate reductase	NA	R9TRT5	Rhizobium_phage	73.8	2.2e-174
>prophage 2
CP012640	Massilia sp. WG5, complete sequence	6013801	1026154	1030481	6013801		uncultured_Caudovirales_phage(83.33%)	6	NA	NA
ALK99670.1|1026154_1026667_+	arsenate reductase	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	40.0	3.5e-23
ALK97694.1|1027109_1027589_+	ArsC family transcriptional regulator	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	51.9	1.4e-39
ALK97695.1|1027663_1028944_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	76.3	7.3e-179
ALK99671.1|1028969_1029392_+	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	67.9	2.0e-48
ALK97696.1|1029388_1030105_+	NADPH-dependent FMN reductase	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	71.0	4.6e-90
ALK99672.1|1030154_1030481_-	hypothetical protein	NA	A0A218MNG8	uncultured_virus	59.6	1.8e-25
>prophage 3
CP012640	Massilia sp. WG5, complete sequence	6013801	4274547	4290220	6013801	integrase,tRNA	Bacillus_phage(22.22%)	12	4264047:4264064	4283209:4283226
4264047:4264064	attL	TGCTGCCGCGCTGGCGCG	NA	NA	NA	NA
ALK99366.2|4274547_4275504_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	35.7	4.3e-27
ALK95713.1|4275505_4276789_+	ABC transporter	NA	NA	NA	NA	NA
ALK95714.1|4276838_4277675_-|integrase	integrase	integrase	A0A1B1P773	Bacillus_phage	53.6	3.6e-78
ALK99367.1|4277674_4278199_-	hypothetical protein	NA	A0A1B1P776	Bacillus_phage	38.5	3.5e-23
ALK95715.1|4278263_4282034_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	49.2	1.9e-09
ALK95716.1|4282354_4282585_+	hypothetical protein	NA	NA	NA	NA	NA
ALK99368.1|4282633_4283581_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	34.8	5.6e-11
4283209:4283226	attR	CGCGCCAGCGCGGCAGCA	NA	NA	NA	NA
ALK95717.1|4283592_4284129_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	44.4	9.9e-21
ALK95718.1|4284369_4285512_+	peptidoglycan-binding protein	NA	G3MBQ1	Bacillus_virus	51.1	1.3e-09
ALK95719.1|4285585_4286698_+	DNA processing protein DprA	NA	S6BFL3	Thermus_phage	37.3	6.6e-27
ALK95720.1|4286805_4287270_+	hypothetical protein	NA	NA	NA	NA	NA
ALK95721.1|4287535_4290220_+	DNA topoisomerase III	NA	A0A2P1ELA0	Moumouvirus	25.8	2.2e-23
>prophage 1
CP012641	Massilia sp. WG5 plasmid unnamed 1, complete sequence	187727	13472	79735	187727	transposase	Yellowstone_lake_phycodnavirus(22.22%)	55	NA	NA
ALL00013.1|13472_14180_-|transposase	transposase	transposase	NA	NA	NA	NA
ALL00012.2|14223_14892_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.0	3.6e-12
ALL00011.1|14884_15598_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	26.3	3.8e-12
ALL00010.1|15628_16621_+	aldolase	NA	NA	NA	NA	NA
ALL00009.1|16671_17709_+	hypothetical protein	NA	NA	NA	NA	NA
ALL00008.2|17788_18226_+	hypothetical protein	NA	NA	NA	NA	NA
ALL00045.1|18307_19567_+	hypothetical protein	NA	NA	NA	NA	NA
ALL00007.1|19898_21215_+	MarR family transcriptional regulator	NA	A0A0P0YMZ6	Yellowstone_lake_phycodnavirus	26.8	1.3e-05
ALL00006.1|21243_22233_+	4,5-dihydroxyphthalate decarboxylase	NA	NA	NA	NA	NA
ALL00005.1|22256_23081_+	hypothetical protein	NA	NA	NA	NA	NA
ALL00004.1|23080_23941_+	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA	NA
ALL00003.1|23979_24948_+	phthalate 4,5-dioxygenase	NA	NA	NA	NA	NA
ALL00002.1|24950_26150_+	4,5-dihydroxyphthalate dehydrogenase	NA	NA	NA	NA	NA
ALL00001.1|26252_26960_-|transposase	transposase	transposase	NA	NA	NA	NA
ALK99999.1|27372_28917_-|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	59.3	2.7e-164
ALK99998.1|28946_29294_-	isocitrate lyase	NA	A0A0P0ZBY2	Stx2-converting_phage	72.9	1.9e-41
AWG46013.1|29290_29524_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99996.1|30951_31398_+	hemerythrin	NA	NA	NA	NA	NA
ALK99995.1|31961_32303_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
ALK99994.1|32302_33355_+	ferredoxin-NAD reductase	NA	NA	NA	NA	NA
ALK99993.1|33487_34321_+	cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase	NA	NA	NA	NA	NA
ALK99992.1|34376_35735_+	naphthalene 1,2-dioxygenase	NA	NA	NA	NA	NA
ALK99991.1|35765_36284_+	aromatic-ring-hydroxylating dioxygenase	NA	NA	NA	NA	NA
ALK99990.1|36448_37033_+	2-hydroxychromene-2-carboxylate isomerase	NA	NA	NA	NA	NA
ALK99989.1|37916_38528_+	glutathione S-transferase	NA	NA	NA	NA	NA
ALK99988.1|38637_39639_+	aldolase	NA	NA	NA	NA	NA
ALK99987.1|39641_40685_+	cupin	NA	NA	NA	NA	NA
ALL00044.1|40689_42150_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
ALK99986.1|42281_42833_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
ALK99985.1|43033_43942_+	2,3-dihydroxybiphenyl 1,2-dioxygenase	NA	NA	NA	NA	NA
ALK99984.1|44005_45541_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
ALL00043.1|45634_47308_+	hypothetical protein	NA	NA	NA	NA	NA
ALK99983.1|47319_48681_+	hypothetical protein	NA	NA	NA	NA	NA
ALL00042.1|48853_49882_+	hypothetical protein	NA	NA	NA	NA	NA
ALL00041.1|49887_52281_+	RND transporter	NA	NA	NA	NA	NA
ALK99982.1|52284_53283_+	aldolase	NA	NA	NA	NA	NA
ALL00040.2|55071_55455_-	hypothetical protein	NA	A0A141GEX5	Brucella_phage	41.5	1.7e-06
ALK99981.1|56378_58751_-	DEAD/DEAH box helicase	NA	A0A2K9R7J3	Dishui_lake_phycodnavirus	30.4	1.7e-35
ALL00038.1|58743_59295_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99980.1|60679_60895_+	hypothetical protein	NA	NA	NA	NA	NA
ALK99979.1|60909_61950_-|transposase	transposase	transposase	NA	NA	NA	NA
ALK99978.1|63432_64665_-	4,5-dihydroxyphthalate dehydrogenase	NA	NA	NA	NA	NA
ALK99977.1|64667_65636_-	phthalate 4,5-dioxygenase	NA	NA	NA	NA	NA
ALK99976.1|65674_66535_-	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA	NA
ALK99975.1|66534_67368_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99974.1|67382_68372_-	4,5-dihydroxyphthalate decarboxylase	NA	NA	NA	NA	NA
ALK99973.1|68400_69717_-	MarR family transcriptional regulator	NA	A0A0P0YMZ6	Yellowstone_lake_phycodnavirus	27.3	2.2e-05
ALK99972.1|71688_72006_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99971.1|72252_73542_+	hypothetical protein	NA	NA	NA	NA	NA
ALK99970.1|73578_74145_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
ALK99969.1|74256_75279_-	oxidoreductase	NA	NA	NA	NA	NA
ALK99968.1|75601_76099_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99967.1|76410_76638_-	hypothetical protein	NA	NA	NA	NA	NA
ALK99966.1|77420_78350_-|transposase	transposase	transposase	A0A1V0E8E1	Vibrio_phage	43.5	3.4e-61
ALK99965.1|78694_79735_-|transposase	transposase	transposase	NA	NA	NA	NA
