The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP014038	Vibrio harveyi strain ATCC 43516 chromosome 1, complete sequence	3718359	935385	942311	3718359		Vibrio_phage(83.33%)	9	NA	NA
AMF97042.2|935385_936378_-	hypothetical protein	NA	G3M9Z1	Bacillus_virus	39.1	1.4e-07
AMF97043.1|936825_937182_-	hypothetical protein	NA	NA	NA	NA	NA
AMF97044.1|937460_937817_+	hypothetical protein	NA	NA	NA	NA	NA
AMF99382.1|938665_938866_-	hypothetical protein	NA	U3PDF9	Vibrio_phage	54.8	6.9e-12
AMF97045.1|939201_940410_-	replication protein A	NA	NA	NA	NA	NA
AMF97046.1|940632_940842_-	hypothetical protein	NA	A0A2I7RNH0	Vibrio_phage	54.2	3.3e-12
AMF97047.1|940838_941249_-	hypothetical protein	NA	A0A2I7RNG1	Vibrio_phage	56.8	4.9e-36
AMF97048.1|941307_941520_-	hypothetical protein	NA	U3PFJ1	Vibrio_phage	70.0	7.8e-22
AMF97049.1|941669_942311_+	chromosome partitioning protein ParA	NA	A0A166YHA0	Vibrio_phage	64.2	1.4e-74
>prophage 2
CP014038	Vibrio harveyi strain ATCC 43516 chromosome 1, complete sequence	3718359	1421829	1439485	3718359	tRNA	uncultured_Mediterranean_phage(18.18%)	15	NA	NA
AMF97454.1|1421829_1424412_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.7	5.0e-78
AMF97455.1|1424554_1425022_-	recombination regulator RecX	NA	NA	NA	NA	NA
AMF97456.1|1425228_1426272_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.4	3.1e-111
AMF97457.1|1426473_1426956_-	damage-inducible protein CinA	NA	B5TK85	Pseudomonas_phage	47.5	2.4e-26
AMF97458.1|1427041_1429603_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	22.8	4.4e-34
AMF97459.1|1429696_1430680_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.2	6.9e-36
AMF97460.1|1430760_1431684_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	36.4	2.4e-06
AMF97461.1|1431698_1432325_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.9	1.4e-37
AMF99398.2|1432324_1433101_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	54.1	7.0e-68
AMF97462.1|1433100_1434144_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
AMF97463.1|1434189_1434666_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AMF97464.1|1434680_1435391_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	24.0	1.8e-06
AMF97465.1|1435392_1435674_-	cell division protein FtsB	NA	NA	NA	NA	NA
AMF97466.1|1436465_1437767_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	60.3	3.5e-136
AMF97467.1|1437844_1439485_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.9	9.4e-155
>prophage 3
CP014038	Vibrio harveyi strain ATCC 43516 chromosome 1, complete sequence	3718359	2611712	2618779	3718359		Faustovirus(16.67%)	9	NA	NA
AMF98450.1|2611712_2612927_+	IscS subfamily cysteine desulfurase	NA	A0A1X7C038	Faustovirus	30.2	9.7e-32
AMF98451.1|2612964_2613348_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
AMF98452.1|2613421_2613745_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	51.4	1.0e-25
AMF98453.1|2613800_2614316_+	co-chaperone protein HscB	NA	NA	NA	NA	NA
AMF98454.1|2614337_2616191_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	40.0	1.6e-110
AMF98455.1|2616204_2616543_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AMF98456.1|2616587_2616782_+	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AMF98457.1|2616954_2618253_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.7	9.1e-36
AMF98458.1|2618353_2618779_+	nucleoside-diphosphate kinase	NA	L7Y4C4	Megavirus	40.6	2.7e-21
>prophage 4
CP014038	Vibrio harveyi strain ATCC 43516 chromosome 1, complete sequence	3718359	2729417	2736101	3718359		Staphylococcus_phage(66.67%)	7	NA	NA
AMF98541.1|2729417_2730557_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	2.9e-62
AMF98542.1|2730574_2731825_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	48.2	3.3e-99
AMF98543.1|2731952_2732402_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
AMF98544.1|2732409_2733534_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	35.7	5.4e-45
AMF98545.1|2733545_2734199_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.0	1.1e-34
AMF98546.1|2734351_2735461_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	40.1	1.8e-64
AMF98547.1|2735630_2736101_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 1
CP014039	Vibrio harveyi strain ATCC 43516 chromosome 2, complete sequence	2320570	1960065	1987617	2320570	protease,transposase,holin	Hokovirus(40.0%)	24	NA	NA
AMG01070.1|1960065_1961391_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
AMG01071.1|1961584_1961992_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01072.1|1962086_1962404_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01073.1|1962489_1963167_-	DedA family protein	NA	NA	NA	NA	NA
AMG01074.1|1963217_1963625_-	hypothetical protein	NA	NA	NA	NA	NA
AMG01075.1|1963762_1964281_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AUW38386.1|1964388_1964589_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01076.1|1964862_1965270_-	hypothetical protein	NA	NA	NA	NA	NA
AMG01077.1|1965373_1966231_-	sterol desaturase family protein	NA	NA	NA	NA	NA
AMG01078.1|1966240_1967251_-	DUF2804 domain-containing protein	NA	NA	NA	NA	NA
AMG01079.1|1967746_1968214_-	peroxiredoxin	NA	NA	NA	NA	NA
AMG01080.1|1968334_1970695_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	34.6	5.8e-57
AMG01081.1|1970687_1971665_-	cytochrome B6	NA	NA	NA	NA	NA
AMG01452.2|1971903_1975527_+	sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	27.1	2.1e-34
AMG01082.1|1975527_1976670_+	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AMG01083.1|1976713_1978396_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01084.1|1979067_1980435_+|protease	serine protease	protease	NA	NA	NA	NA
AMG01085.1|1980444_1981236_+	hypothetical protein	NA	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	28.5	2.4e-23
AMG01086.1|1981323_1981728_-	globin	NA	NA	NA	NA	NA
AMG01087.1|1982015_1982672_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
AMG01088.1|1982835_1984020_-|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	35.2	7.8e-26
AMG01089.1|1984021_1984864_-|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
AMG01090.1|1984926_1985865_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AMG01091.1|1985907_1987617_-|holin	choline dehydrogenase	holin	A0A1V0S9J5	Catovirus	28.6	3.6e-48
>prophage 2
CP014039	Vibrio harveyi strain ATCC 43516 chromosome 2, complete sequence	2320570	2254755	2279855	2320570		Vibrio_phage(50.0%)	38	NA	NA
AMG01324.1|2254755_2256750_+	DDE endonuclease	NA	M4M9R2	Vibrio_phage	70.2	3.4e-268
AMG01325.1|2256785_2257730_+	DNA transposition protein	NA	M4M9P4	Vibrio_phage	75.6	5.1e-129
AMG01326.1|2257902_2258316_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01327.1|2258312_2258705_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01328.1|2258701_2259103_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01329.1|2259102_2259390_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01330.1|2259373_2259577_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01331.1|2259580_2260207_+	DUF3164 domain-containing protein	NA	A4JWM8	Burkholderia_virus	40.0	3.3e-36
AMG01332.1|2260220_2260703_-	hypothetical protein	NA	NA	NA	NA	NA
AMG01333.1|2260732_2261218_+	hypothetical protein	NA	M4MHH2	Vibrio_phage	55.1	3.1e-37
AMG01334.1|2261228_2261432_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01335.1|2261518_2261749_+	hypothetical protein	NA	A0A2I7S9D2	Vibrio_phage	56.6	2.2e-17
AUW38396.1|2261758_2262025_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01463.1|2262017_2262536_+	regulatory protein GemA	NA	A0A2I7S9B8	Vibrio_phage	60.4	3.6e-52
AMG01336.1|2262528_2262777_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01337.2|2262845_2263226_+	transcriptional regulator	NA	M4MHG9	Vibrio_phage	49.6	3.5e-28
AMG01338.1|2263301_2263868_+	peptidoglycan-binding protein	NA	A0A2I7S9B9	Vibrio_phage	71.0	9.0e-73
AMG01339.1|2263867_2264140_+	hypothetical protein	NA	A0A2I7S9C2	Vibrio_phage	56.0	9.8e-17
AMG01340.1|2264124_2264724_+	hypothetical protein	NA	M1NVP4	Vibrio_phage	51.0	5.6e-41
AMG01464.1|2264747_2264978_+	conjugal transfer protein TraR	NA	NA	NA	NA	NA
AMG01341.1|2264964_2265264_+	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
AMG01342.1|2265272_2265566_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	79.8	7.0e-37
AMG01343.1|2265575_2266145_+	DUF3486 domain-containing protein	NA	M4MCR3	Vibrio_phage	61.2	6.7e-52
AMG01344.1|2266144_2267794_+	hypothetical protein	NA	A0A0C4UR29	Shigella_phage	68.1	3.4e-213
AMG01465.1|2267809_2269372_+	DUF935 domain-containing protein	NA	C9DGN6	Escherichia_phage	48.4	1.8e-123
AMG01466.1|2269382_2270792_+	F protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	51.0	3.2e-63
AMG01345.1|2270788_2270992_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01346.1|2270991_2271465_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
AMG01347.1|2271698_2272826_+	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	40.7	5.1e-67
AMG01348.1|2272841_2273231_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01349.1|2273272_2274166_+	hypothetical protein	NA	J9SVY7	Pseudomonas_phage	46.1	7.5e-74
AMG01350.1|2274230_2274638_+	hypothetical protein	NA	A0A0C4UQZ0	Shigella_phage	41.1	2.7e-10
AMG01351.1|2274640_2275069_+	DUF1320 domain-containing protein	NA	A0A0M3LP98	Mannheimia_phage	34.8	2.5e-14
AMG01352.1|2275065_2275503_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01353.1|2275492_2276422_+	hypothetical protein	NA	K7XS75	uncultured_Mediterranean_phage	33.3	6.7e-33
AMG01354.1|2276447_2276780_+	hypothetical protein	NA	G8EY05	Synechococcus_phage	35.2	4.4e-11
AMG01355.1|2276794_2277115_+	hypothetical protein	NA	NA	NA	NA	NA
AMG01356.1|2277098_2279855_+	hypothetical protein	NA	A0A1C6ZDP8	Pseudomonas_phage	24.0	4.8e-18
