assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	1	31264-31345	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	1	31288-31321	CP014064.2_550769-550736	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|38aa|up_1|CP014064.2_30166_30280_+,NA|38aa|down_0|CP014064.2_31633_31747_+	NA|187aa|up_9|CP014064.2_24387_24948_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|165aa|up_8|CP014064.2_25792_26287_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|CP014064.2_26685_27108_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|CP014064.2_27255_27972_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|CP014064.2_28054_28594_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|CP014064.2_28744_29065_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|CP014064.2_29208_29565_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|CP014064.2_29722_30103_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|CP014064.2_30166_30280_+	NA	NA|293aa|up_0|CP014064.2_30281_31160_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|38aa|down_0|CP014064.2_31633_31747_+	NA	NA|129aa|down_1|CP014064.2_31956_32343_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_2|CP014064.2_32335_32632_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_3|CP014064.2_32881_33907_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_4|CP014064.2_33899_34595_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_5|CP014064.2_34612_35434_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_6|CP014064.2_35787_35982_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_7|CP014064.2_36215_37067_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_8|CP014064.2_37394_38156_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_9|CP014064.2_38253_39561_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	2	1248229-1248310	2	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	GGCCCCCACCCCAACTTACATTGT	24	1	5	1248253-1248286|1248253-1248286|1248253-1248286|1248253-1248286|1248253-1248286	CP014064.2_2767579-2767612|CP014064.2_337340-337307|CP014064.2_940643-940610|CP014064.2_555110-555143|CP014064.2_1939000-1939033	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|58aa|up_9|CP014064.2_1238946_1239120_-,NA|114aa|up_6|CP014064.2_1240749_1241091_+,NA|61aa|up_5|CP014064.2_1241294_1241477_+,NA	NA|58aa|up_9|CP014064.2_1238946_1239120_-	NA	NA|238aa|up_8|CP014064.2_1239082_1239796_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	DEDDh|311aa|up_7|CP014064.2_1239811_1240744_+	PRK06195, PRK06195, DNA polymerase III subunit epsilon; Validated	NA|114aa|up_6|CP014064.2_1240749_1241091_+	NA	NA|61aa|up_5|CP014064.2_1241294_1241477_+	NA	NA|155aa|up_4|CP014064.2_1241576_1242041_+	PRK08119, PRK08119, flagellar motor switch protein; Validated	NA|346aa|up_3|CP014064.2_1242099_1243137_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|339aa|up_2|CP014064.2_1244255_1245272_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|352aa|up_1|CP014064.2_1245293_1246349_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|408aa|up_0|CP014064.2_1246784_1248008_+	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|436aa|down_0|CP014064.2_1248451_1249759_+	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|539aa|down_1|CP014064.2_1250298_1251915_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_2|CP014064.2_1251990_1252275_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|248aa|down_3|CP014064.2_1252449_1253193_+	pfam02517, Abi, CAAX protease self-immunity	NA|420aa|down_4|CP014064.2_1253217_1254477_-	PRK10819, PRK10819, transport protein TonB; Provisional	NA|209aa|down_5|CP014064.2_1254673_1255300_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|262aa|down_6|CP014064.2_1255660_1256446_+	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|45aa|down_7|CP014064.2_1257045_1257180_-	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|188aa|down_8|CP014064.2_1257415_1257979_+	COG4512, AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription]	NA|48aa|down_9|CP014064.2_1257981_1258125_+	smart00794, AgrD, Staphylococcal AgrD protein
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	3	1377485-1377565	3	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,RT,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|77aa|up_5|CP014064.2_1372359_1372590_-,NA|364aa|up_0|CP014064.2_1376376_1377468_+,NA|35aa|down_0|CP014064.2_1377900_1378005_-,NA|61aa|down_1|CP014064.2_1378437_1378620_-,NA|53aa|down_2|CP014064.2_1378684_1378843_+,NA|31aa|down_3|CP014064.2_1379279_1379372_+	NA|237aa|up_9|CP014064.2_1367970_1368681_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|CP014064.2_1368801_1369245_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|CP014064.2_1369444_1369858_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|CP014064.2_1370314_1371688_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|CP014064.2_1372359_1372590_-	NA	NA|313aa|up_4|CP014064.2_1372620_1373559_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|CP014064.2_1373994_1374660_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|CP014064.2_1374811_1375132_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|326aa|up_1|CP014064.2_1375133_1376111_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|CP014064.2_1376376_1377468_+	NA	NA|35aa|down_0|CP014064.2_1377900_1378005_-	NA	NA|61aa|down_1|CP014064.2_1378437_1378620_-	NA	NA|53aa|down_2|CP014064.2_1378684_1378843_+	NA	NA|31aa|down_3|CP014064.2_1379279_1379372_+	NA	NA|286aa|down_4|CP014064.2_1379500_1380358_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_5|CP014064.2_1380425_1381208_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_6|CP014064.2_1381439_1383245_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_7|CP014064.2_1383925_1385464_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_8|CP014064.2_1385498_1387631_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_9|CP014064.2_1387642_1388077_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	4	1498845-1498925	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTG	25	1	15	1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900|1498870-1498900	CP014064.2_2780323-2780353|CP014064.2_2780379-2780409|CP014064.2_31600-31630|CP014064.2_240318-240348|CP014064.2_343106-343076|CP014064.2_550725-550695|CP014064.2_639127-639157|CP014064.2_639243-639273|CP014064.2_835339-835309|CP014064.2_1486549-1486579|CP014064.2_1663700-1663730|CP014064.2_2016683-2016713|CP014064.2_2314395-2314365|CP014064.2_2601184-2601154|CP014064.2_2780435-2780465	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|106aa|up_9|CP014064.2_1488267_1488585_+,NA|84aa|up_5|CP014064.2_1495226_1495478_+,NA|62aa|up_0|CP014064.2_1498617_1498803_+,NA	NA|106aa|up_9|CP014064.2_1488267_1488585_+	NA	NA|440aa|up_8|CP014064.2_1488837_1490157_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|1056aa|up_7|CP014064.2_1490288_1493456_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|CP014064.2_1493572_1494838_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|CP014064.2_1495226_1495478_+	NA	NA|255aa|up_4|CP014064.2_1495469_1496234_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|CP014064.2_1496395_1496836_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|CP014064.2_1496828_1498040_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|CP014064.2_1498141_1498492_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|62aa|up_0|CP014064.2_1498617_1498803_+	NA	NA|341aa|down_0|CP014064.2_1499068_1500091_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|CP014064.2_1500110_1500710_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|CP014064.2_1500716_1500950_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|CP014064.2_1500955_1501402_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|CP014064.2_1501415_1501901_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|CP014064.2_1501897_1503157_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|CP014064.2_1503219_1503714_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|CP014064.2_1503715_1504222_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|CP014064.2_1504252_1505257_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|CP014064.2_1505426_1506032_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	5	2115344-2115428	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGGTG	26	1	2	2115370-2115402|2115370-2115402	CP014064.2_550737-550769|CP014064.2_639115-639083	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|402aa|up_9|CP014064.2_2104489_2105695_+,NA|68aa|down_0|CP014064.2_2115489_2115693_-	NA|402aa|up_9|CP014064.2_2104489_2105695_+	NA	NA|402aa|up_8|CP014064.2_2105695_2106901_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|186aa|up_7|CP014064.2_2106911_2107469_+	COG2148, WcaJ, Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane]	NA|296aa|up_6|CP014064.2_2107468_2108356_+	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs	NA|421aa|up_5|CP014064.2_2108409_2109672_+	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|382aa|up_4|CP014064.2_2109748_2110894_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|109aa|up_3|CP014064.2_2110958_2111285_-	PRK13313, PRK13313, staphylobilin-forming heme oxygenase IsdI	NA|128aa|up_2|CP014064.2_2111291_2111675_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|496aa|up_1|CP014064.2_2112101_2113589_+	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like	NA|320aa|up_0|CP014064.2_2114235_2115195_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|68aa|down_0|CP014064.2_2115489_2115693_-	NA	NA|171aa|down_1|CP014064.2_2115871_2116384_+	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|247aa|down_2|CP014064.2_2116725_2117466_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|324aa|down_3|CP014064.2_2117479_2118451_+	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily	NA|254aa|down_4|CP014064.2_2118447_2119209_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|344aa|down_5|CP014064.2_2119221_2120253_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|120aa|down_6|CP014064.2_2120469_2120829_+	COG5609, COG5609, Uncharacterized conserved protein [Function unknown]	NA|342aa|down_7|CP014064.2_2121002_2122028_+	PRK07574, PRK07574, NAD-dependent formate dehydrogenase	NA|417aa|down_8|CP014064.2_2122413_2123664_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|2392aa|down_9|CP014064.2_2124110_2131286_+	PRK12467, PRK12467, peptide synthase; Provisional
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	6	2353103-2353204	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|70aa|up_9|CP014064.2_2344662_2344872_-,NA|128aa|up_7|CP014064.2_2345696_2346080_-,NA|33aa|up_1|CP014064.2_2352327_2352426_+,NA|86aa|up_0|CP014064.2_2352636_2352894_-,NA|221aa|down_1|CP014064.2_2354294_2354957_-,NA|179aa|down_7|CP014064.2_2361048_2361585_-	NA|70aa|up_9|CP014064.2_2344662_2344872_-	NA	NA|194aa|up_8|CP014064.2_2345049_2345631_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|CP014064.2_2345696_2346080_-	NA	NA|209aa|up_6|CP014064.2_2346349_2346976_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|508aa|up_5|CP014064.2_2347419_2348943_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_4|CP014064.2_2348958_2349528_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_3|CP014064.2_2350019_2350775_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_2|CP014064.2_2350854_2352243_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|33aa|up_1|CP014064.2_2352327_2352426_+	NA	NA|86aa|up_0|CP014064.2_2352636_2352894_-	NA	NA|319aa|down_0|CP014064.2_2353220_2354177_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|CP014064.2_2354294_2354957_-	NA	NA|136aa|down_2|CP014064.2_2355099_2355507_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|CP014064.2_2356019_2356598_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|CP014064.2_2356597_2357866_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|CP014064.2_2357903_2359370_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|CP014064.2_2359394_2360936_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|CP014064.2_2361048_2361585_-	NA	NA|235aa|down_8|CP014064.2_2361976_2362681_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|CP014064.2_2363079_2363352_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	7	2767580-2767658	7	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TGTAGAATTTCTTTTCGAAATTCT	24	1	3	2767604-2767634|2767604-2767634|2767604-2767634	CP014064.2_2238572-2238542|CP014064.2_855127-855157|CP014064.2_2238517-2238487	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA|35aa|up_7|CP014064.2_2758463_2758568_+,NA|36aa|up_5|CP014064.2_2759993_2760101_+,NA|63aa|down_5|CP014064.2_2772982_2773171_-	NA|191aa|up_9|CP014064.2_2754904_2755477_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|CP014064.2_2755890_2758422_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|CP014064.2_2758463_2758568_+	NA	NA|370aa|up_6|CP014064.2_2758729_2759840_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|CP014064.2_2759993_2760101_+	NA	NA|280aa|up_4|CP014064.2_2760248_2761088_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|CP014064.2_2761261_2761912_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|CP014064.2_2761908_2762145_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|CP014064.2_2762413_2764399_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|CP014064.2_2764406_2767253_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|CP014064.2_2767916_2768849_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|CP014064.2_2768854_2769694_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|CP014064.2_2769701_2770187_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|CP014064.2_2770194_2771634_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|CP014064.2_2771700_2772636_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|63aa|down_5|CP014064.2_2772982_2773171_-	NA	NA|304aa|down_6|CP014064.2_2773521_2774433_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_7|CP014064.2_2774429_2775425_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_8|CP014064.2_2775535_2776480_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_9|CP014064.2_2777043_2777631_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed
GCA_001558795.2_ASM155879v2	CP014064	Staphylococcus aureus strain FDAARGOS_159 chromosome, complete genome	8	2773035-2773304	1	CRT	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TTCTCTGTGTTGGGGCCCACACCCCAACTNGCATTG	36	4	40	2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773071-2773092|2773129-2773151|2773129-2773151|2773129-2773151|2773129-2773151|2773129-2773151|2773129-2773151|2773129-2773151|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773188-2773209|2773246-2773268|2773246-2773268|2773246-2773268|2773246-2773268|2773246-2773268|2773246-2773268|2773246-2773268	CP014064.2_31337-31358|CP014064.2_550661-550640|CP014064.2_639191-639212|CP014064.2_820721-820742|CP014064.2_835276-835255|CP014064.2_1147067-1147088|CP014064.2_2115352-2115331|CP014064.2_2238488-2238467|CP014064.2_2238598-2238577|CP014064.2_2601120-2601099|CP014064.2_2725625-2725646|CP014064.2_144827-144848|CP014064.2_854982-855003|CP014064.2_550778-550756|CP014064.2_1147125-1147147|CP014064.2_1486496-1486518|CP014064.2_2726597-2726575|CP014064.2_2726931-2726909|CP014064.2_639074-639096|CP014064.2_1248310-1248332|CP014064.2_31337-31358|CP014064.2_550661-550640|CP014064.2_639191-639212|CP014064.2_820721-820742|CP014064.2_835276-835255|CP014064.2_1147067-1147088|CP014064.2_2115352-2115331|CP014064.2_2238488-2238467|CP014064.2_2238598-2238577|CP014064.2_2601120-2601099|CP014064.2_2725625-2725646|CP014064.2_144827-144848|CP014064.2_854982-855003|CP014064.2_550778-550756|CP014064.2_1147125-1147147|CP014064.2_1486496-1486518|CP014064.2_2726597-2726575|CP014064.2_2726931-2726909|CP014064.2_639074-639096|CP014064.2_1248310-1248332	NA	4	4	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA	NA|280aa|up_9|CP014064.2_2760248_2761088_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_8|CP014064.2_2761261_2761912_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_7|CP014064.2_2761908_2762145_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_6|CP014064.2_2762413_2764399_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_5|CP014064.2_2764406_2767253_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|up_4|CP014064.2_2767916_2768849_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|up_3|CP014064.2_2768854_2769694_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|up_2|CP014064.2_2769701_2770187_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_1|CP014064.2_2770194_2771634_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|up_0|CP014064.2_2771700_2772636_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_0|CP014064.2_2773521_2774433_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_1|CP014064.2_2774429_2775425_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_2|CP014064.2_2775535_2776480_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_3|CP014064.2_2777043_2777631_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_4|CP014064.2_2777873_2778776_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_5|CP014064.2_2779478_2780108_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_6|CP014064.2_2780920_2781934_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_7|CP014064.2_2781986_2782997_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_8|CP014064.2_2783135_2784326_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_9|CP014064.2_2784447_2785209_+	PRK00042, tpiA, triosephosphate isomerase; Provisional
