assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_001559115.2_ASM155911v2	CP014016	Staphylococcus simulans strain FDAARGOS_124, complete genome	1	1194342-1195031	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,RT,cas9	Unclear	GTTTTACTTCATTCTAAAAGATCACAATTCTAAAAC,GTTTTACTTCATTCTAAAAGATCACAATTCTAAAAC,AGTTTTACTTCATTCTAAAAGATCACAATTCTAAAAC	36,36,37	0	0	NA	NA	NA:NA:NA	10,10,3	10	Unclear	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,RT,cas9	NA,NA|284aa|down_0|CP014016.2_1195081_1195933_-	NA|204aa|up_9|CP014016.2_1182375_1182987_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|235aa|up_8|CP014016.2_1182988_1183693_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|306aa|up_7|CP014016.2_1183692_1184610_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|255aa|up_6|CP014016.2_1184606_1185371_-	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase	NA|1058aa|up_5|CP014016.2_1185428_1188602_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|367aa|up_4|CP014016.2_1188594_1189695_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|424aa|up_3|CP014016.2_1189701_1190973_-	PRK09357, pyrC, dihydroorotase; Validated	NA|303aa|up_2|CP014016.2_1190959_1191868_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|434aa|up_1|CP014016.2_1191898_1193200_-	PRK10720, PRK10720, uracil transporter; Provisional	NA|176aa|up_0|CP014016.2_1193421_1193949_-	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|284aa|down_0|CP014016.2_1195081_1195933_-	NA	cas2|103aa|down_1|CP014016.2_1195929_1196238_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|292aa|down_2|CP014016.2_1196272_1197148_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	NA|306aa|down_3|CP014016.2_1201429_1202347_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|161aa|down_4|CP014016.2_1202359_1202842_-	PRK00376, lspA, lipoprotein signal peptidase	NA|153aa|down_5|CP014016.2_1202971_1203430_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|265aa|down_6|CP014016.2_1203463_1204258_-	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only]	NA|916aa|down_7|CP014016.2_1205920_1208668_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|205aa|down_8|CP014016.2_1208902_1209517_-	pfam05103, DivIVA, DivIVA protein	NA|242aa|down_9|CP014016.2_1209543_1210269_-	COG2302, COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown]
GCA_001559115.2_ASM155911v2	CP014016	Staphylococcus simulans strain FDAARGOS_124, complete genome	2	2570472-2571034	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,RT,cas9	 or Type II-C?,Type II-C, Type II-B,Type II-A,Type II-B	GTTTTAGTACTCTGTAATTTTAGGTAT,GTTTTAGTACTCTGTAATTTTAGGTATGAGTGATTC,GTTTTAGTACTCTGTAATTTTAGGTATNAGTGATTC	27,36,36	0	0	NA	NA	NA:NA:NA	8,8,8	8	orTypeII-C?,TypeII-C,TypeII-B,TypeII-A,TypeII-B	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,RT,cas9	NA|146aa|up_5|CP014016.2_2564353_2564791_+,NA|330aa|up_0|CP014016.2_2569451_2570441_+,NA|60aa|down_9|CP014016.2_2581441_2581621_-	NA|349aa|up_9|CP014016.2_2558811_2559858_+	PRK03906, PRK03906, mannonate dehydratase; Provisional	NA|281aa|up_8|CP014016.2_2559862_2560705_+	PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional	NA|600aa|up_7|CP014016.2_2560725_2562525_+	PRK10150, PRK10150, beta-D-glucuronidase; Provisional	NA|441aa|up_6|CP014016.2_2562662_2563985_-	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	NA|146aa|up_5|CP014016.2_2564353_2564791_+	NA	cas9|77aa|up_4|CP014016.2_2565047_2565278_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas9|985aa|up_3|CP014016.2_2565253_2568208_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas1|302aa|up_2|CP014016.2_2568215_2569121_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|103aa|up_1|CP014016.2_2569132_2569441_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|330aa|up_0|CP014016.2_2569451_2570441_+	NA	NA|363aa|down_0|CP014016.2_2571202_2572291_+	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|357aa|down_1|CP014016.2_2572533_2573604_+	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|244aa|down_2|CP014016.2_2574109_2574841_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|336aa|down_3|CP014016.2_2574830_2575838_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|148aa|down_4|CP014016.2_2575840_2576284_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|455aa|down_5|CP014016.2_2576301_2577666_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|253aa|down_6|CP014016.2_2577662_2578421_+	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA	NA|410aa|down_7|CP014016.2_2578424_2579654_+	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]	NA|499aa|down_8|CP014016.2_2579878_2581375_+	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|60aa|down_9|CP014016.2_2581441_2581621_-	NA
