The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	359419	367892	2748803		Synechococcus_phage(33.33%)	9	NA	NA
AUN01083.1|359419_359986_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
AOH58153.1|359988_361017_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
AOH57795.1|361009_362494_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	4.2e-45
AOH59037.1|362472_364662_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.3e-140
AOH58646.1|364654_365326_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AOH58915.1|365327_365591_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AOH58989.1|365590_366295_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
AOH57921.1|366298_367423_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AOH58136.1|367409_367892_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 2
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	624944	639298	2748803		uncultured_Caudovirales_phage(50.0%)	16	NA	NA
AOH58076.2|624944_625706_-	iron ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
AOH57699.1|625702_626659_-	iron ABC transporter permease	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AOH57848.1|626645_627617_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AUN01107.1|627655_627811_-	hypothetical protein	NA	NA	NA	NA	NA
AOH58877.1|627991_628963_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AOH59438.1|629080_631186_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AOH58515.1|631148_631547_-	protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AOH58138.1|632360_633227_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AOH59386.1|633246_633747_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AUN01108.1|633776_634022_+	hypothetical protein	NA	NA	NA	NA	NA
AOH58477.1|634087_635593_+	dipeptide/tripeptide permease DtpA	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AUN01109.1|635670_635772_-	hypothetical protein	NA	NA	NA	NA	NA
AOH57645.1|635861_636779_+	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.8e-07
AUN01110.1|637191_637290_-	hypothetical protein	NA	NA	NA	NA	NA
AOH58700.1|637402_637945_-	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AOH59636.1|638239_639298_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
>prophage 3
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	651269	659089	2748803		Pandoravirus(16.67%)	10	NA	NA
AOH57479.2|651269_652421_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	7.8e-23
AOH59221.1|652404_652998_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AOH58242.1|653348_654017_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AOH58295.1|654018_654438_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AOH58335.1|654441_655155_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AOH57697.1|655253_655838_+	hypothetical protein	NA	NA	NA	NA	NA
AOH57621.1|656117_656558_+	hypothetical protein	NA	NA	NA	NA	NA
AOH57669.1|656899_657373_+	DoxX family protein	NA	NA	NA	NA	NA
AOH60217.1|657347_658034_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AOH58542.1|658033_659089_+	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
>prophage 4
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	2106033	2169876	2748803	integrase,tail,head,portal,capsid,terminase,holin,transposase,protease	Staphylococcus_phage(95.71%)	88	2108030:2108047	2131006:2131023
AOH58334.2|2106033_2107086_+	bi-component leukocidin LukGH subunit H	NA	A0A2I6PER8	Staphylococcus_phage	31.8	2.4e-34
AOH59217.1|2107107_2108124_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	5.1e-26
2108030:2108047	attL	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
AUN01285.1|2108361_2109186_-	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
AOH58293.1|2109242_2110280_-|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
AOH59307.1|2110338_2110803_-	murein hydrolase activator NlpD	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
AOH59798.1|2110902_2111085_-	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
AOH59371.1|2111288_2111630_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
AOH58785.1|2111635_2112568_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
AOH59267.1|2112583_2113297_-	XRE family transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
AUN01286.1|2113259_2113433_+	transcriptional regulator	NA	NA	NA	NA	NA
AOH59673.1|2113429_2113693_+	XRE family transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	98.9	2.1e-40
AOH57763.1|2113708_2113906_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
AOH60084.1|2113892_2114273_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	99.2	3.4e-68
AOH58552.1|2114327_2114651_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
AUN01287.1|2114647_2114809_+	DUF1270 domain-containing protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
AOH57651.1|2114903_2115206_+	hypothetical protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
AOH60031.1|2115210_2115471_+	DUF1108 domain-containing protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
AUN01288.1|2115479_2115743_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
AOH57808.2|2115751_2117695_+	ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
AOH57998.1|2117696_2118617_+	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	99.7	1.5e-165
AOH58884.2|2118697_2119315_+	MBL fold metallo-hydrolase	NA	A0A2I6PDI9	Staphylococcus_phage	100.0	9.1e-87
AOH60127.1|2119315_2119786_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	98.7	1.3e-80
AOH57696.1|2119815_2120709_+	DnaD domain protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.3	5.5e-141
AOH60181.1|2120715_2120934_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
AOH59229.2|2120942_2121347_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.9e-72
AOH59889.1|2121359_2121728_+	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
AOH59508.1|2121731_2121974_+	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
AOH60095.1|2121988_2122243_+	DUF1024 domain-containing protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
AOH58699.1|2122392_2122929_+	dUTPase	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
AOH59323.1|2122965_2123211_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
AOH59619.1|2123207_2123414_+	succinate dehydrogenase flavoprotein subunit	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
AOH58481.1|2123410_2123797_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
AOH57901.1|2123793_2123943_+	transcriptional regulator	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
AOH59866.1|2123942_2124143_+	hypothetical protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
AOH58460.1|2124170_2124587_+	transcriptional regulator	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
AOH57523.2|2124818_2125118_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
AOH57811.1|2125249_2125594_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
AOH58598.2|2125590_2127252_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	99.8	0.0e+00
AOH59914.1|2127267_2128455_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
AOH59951.1|2128438_2129176_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
AOH58168.1|2129199_2130345_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
AOH59039.1|2130364_2130625_+	hypothetical protein	NA	A0A0H3U504	Staphylococcus_phage	100.0	6.4e-42
AOH58214.1|2130637_2130922_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
AOH58004.1|2130905_2131268_+|head,tail	phage head-tail adapter protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
2131006:2131023	attR	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
AOH58759.1|2131264_2131669_+	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	99.3	2.1e-68
AOH59915.1|2131665_2132073_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
AOH57801.1|2132073_2132718_+|tail	phage tail protein	tail	A0A1X9H0J2	Staphylococcus_phage	100.0	1.5e-119
AUN01289.1|2132759_2132984_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
AOH60035.1|2133033_2133384_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
AOH59909.2|2133628_2138158_+|tail	phage tail tape measure protein	tail	A0A2I6PDK2	Staphylococcus_phage	99.7	0.0e+00
AOH57469.1|2138154_2139639_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
AOH58067.1|2139654_2143440_+	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.5	0.0e+00
AOH60073.1|2143429_2143582_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
AOH59390.2|2143628_2143916_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
AOH57894.2|2143973_2144270_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
AOH58110.2|2144419_2144596_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
AUN01290.1|2144648_2144756_-	hypothetical protein	NA	NA	NA	NA	NA
AOH58254.1|2144807_2145062_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AOH59204.1|2145073_2145829_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
AOH57861.1|2146019_2146511_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
AUN01291.1|2147037_2147496_+	amidase	NA	R9QTN8	Staphylococcus_phage	98.7	4.9e-85
AOH58628.1|2147590_2148040_-	chemotaxis inhibitory protein	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
AOH59494.1|2148723_2149074_+	inhibitor	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
AOH57546.2|2149126_2149387_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
AUN01292.1|2149365_2149674_-	hypothetical protein	NA	M9NTD8	Staphylococcus_phage	100.0	2.1e-39
AUN01293.1|2149697_2149877_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
AOH58731.2|2150248_2150449_-	hypothetical protein	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
AOH58850.2|2150834_2152268_+	protein map	NA	NA	NA	NA	NA
AUN01294.1|2152278_2152569_+	adherence protein Eap/Map	NA	NA	NA	NA	NA
AOH59447.1|2152892_2154179_-	aspartate aminotransferase	NA	NA	NA	NA	NA
AUN01295.1|2154378_2154477_+	hypothetical protein	NA	NA	NA	NA	NA
AOH60116.1|2154719_2154896_+	hypothetical protein	NA	NA	NA	NA	NA
AOH58122.1|2155154_2155535_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AOH58641.1|2155531_2156428_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
AOH59823.1|2156428_2157109_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
AOH59757.1|2157105_2157978_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
AOH58534.1|2157977_2158718_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
AOH57916.1|2158783_2159347_-	thioredoxin family protein	NA	NA	NA	NA	NA
AOH57648.1|2159467_2159992_+	hypothetical protein	NA	NA	NA	NA	NA
AOH59689.1|2160051_2160609_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
AOH57682.1|2160605_2161448_+	hypothetical protein	NA	NA	NA	NA	NA
AOH57618.1|2161504_2162545_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
AOH59337.1|2162995_2163169_+	hypothetical protein	NA	NA	NA	NA	NA
AOH58627.2|2163675_2164827_+|transposase	transposase	transposase	P97010	Streptococcus_pyogenes_phage	31.0	9.0e-11
AUN01395.1|2164865_2166893_+|transposase	transposase	transposase	NA	NA	NA	NA
AOH58636.1|2166901_2167267_+	taurine dioxygenase	NA	NA	NA	NA	NA
AOH58581.2|2167295_2167715_-	protein arginine kinase	NA	U3PG23	Staphylococcus_phage	54.2	1.1e-30
AOH59042.2|2168196_2169876_+|transposase	IS5/IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	77.4	1.9e-243
>prophage 5
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	2252586	2306235	2748803	tRNA,protease	Staphylococcus_phage(90.0%)	58	NA	NA
AOH58668.2|2252586_2253729_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AOH57551.1|2253733_2254204_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
AOH60141.1|2254361_2254961_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
AOH57691.1|2254985_2255138_+	hypothetical protein	NA	NA	NA	NA	NA
AUN01305.1|2255501_2255666_-	nitrogen fixation protein NifR	NA	NA	NA	NA	NA
AOH57954.1|2255971_2256367_+	hypothetical protein	NA	NA	NA	NA	NA
AOH57583.1|2256562_2257948_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AUN01306.1|2258400_2259222_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AOH59888.1|2259384_2260497_+	histidine kinase	NA	NA	NA	NA	NA
AOH58068.1|2260518_2261142_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AOH58956.1|2261497_2261962_+	transcriptional regulator	NA	NA	NA	NA	NA
AOH59848.1|2262140_2263265_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AOH57554.1|2263333_2263678_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
AUN01307.1|2263950_2264157_-	hypothetical protein	NA	NA	NA	NA	NA
AUN01308.1|2264170_2264269_+	hypothetical protein	NA	NA	NA	NA	NA
AOH59778.1|2264559_2265756_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
AOH58508.2|2265745_2268682_+	DNA repair protein Rad50	NA	NA	NA	NA	NA
AOH59491.1|2268678_2269620_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
AOH59816.2|2269740_2270703_-	foldase	NA	NA	NA	NA	NA
AOH59315.1|2270907_2271465_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
AOH59395.1|2272197_2272563_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
AOH58347.1|2272704_2273127_-	HIT family protein	NA	NA	NA	NA	NA
AOH60063.1|2273260_2274001_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	2.0e-24
AOH59027.1|2273993_2275217_+	multidrug ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AOH58162.1|2275340_2275844_-	signal transduction protein TRAP	NA	NA	NA	NA	NA
AUN01309.1|2276006_2276117_+	hypothetical protein	NA	NA	NA	NA	NA
AOH58535.1|2276106_2277144_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AOH57898.1|2277201_2278125_+	ferrochelatase	NA	NA	NA	NA	NA
AOH59923.2|2278148_2279549_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
AOH59254.1|2279869_2280424_+	serine hydrolase family protein	NA	NA	NA	NA	NA
AOH57498.1|2281792_2282557_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	37.1	2.3e-31
AOH58444.1|2282837_2283557_+	superantigen-like protein SSL12	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
AOH57704.1|2283591_2284320_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
AUN01310.1|2284473_2285244_+	exotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.2	1.4e-44
AOH58994.2|2285282_2286038_+	exotoxin	NA	A0A075M4C7	Staphylococcus_phage	41.0	1.0e-39
AOH57567.2|2286320_2287097_+	exotoxin	NA	NA	NA	NA	NA
AUN01311.1|2287314_2287500_-	hypothetical protein	NA	NA	NA	NA	NA
AOH58863.1|2287648_2288425_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AOH58135.1|2288445_2288682_-	hypothetical protein	NA	NA	NA	NA	NA
AUN01312.1|2288759_2289254_-	hypothetical protein	NA	NA	NA	NA	NA
AOH58191.1|2290087_2290876_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.0	1.3e-138
AOH59725.1|2292239_2293175_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
AOH59827.1|2293176_2294160_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
AOH59945.1|2294530_2295322_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AOH58732.1|2295326_2295800_-	hypothetical protein	NA	NA	NA	NA	NA
AOH57623.2|2296055_2296274_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	81.9	1.4e-26
AOH60205.1|2296747_2297326_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	59.6	1.9e-49
AUN01313.1|2297635_2297854_+	hypothetical protein	NA	NA	NA	NA	NA
AOH57719.1|2298289_2298997_+|protease	serine protease	protease	A0A2H4PQN3	Staphylococcus_phage	97.9	1.6e-127
AOH58253.1|2299121_2299844_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	100.0	6.4e-132
AOH60017.1|2299901_2300621_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
AOH59178.1|2300741_2301461_+|protease	serine protease	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	5.1e-129
AUN01314.1|2301409_2301517_-	hypothetical protein	NA	NA	NA	NA	NA
AOH59339.1|2301618_2302275_+|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	99.1	1.3e-118
AOH60125.1|2302485_2303205_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	98.3	1.0e-129
AUN01315.1|2303269_2303404_+	hypothetical protein	NA	NA	NA	NA	NA
AOH59102.2|2303384_2305124_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	3.8e-287
AOH60122.1|2305116_2306235_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.1	7.6e-39
>prophage 6
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	2311468	2343435	2748803	protease	Staphylococcus_phage(93.33%)	34	NA	NA
AOH57937.1|2311468_2312026_+	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	96.8	9.1e-78
AUN01317.1|2312223_2312796_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	1.6e-24
AOH59777.1|2312896_2313238_-	DUF3969 domain-containing protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.9e-55
AOH58740.1|2313278_2313905_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	91.3	1.3e-88
AOH59921.1|2313978_2314974_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	94.4	9.6e-70
AOH57681.2|2315054_2315705_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	98.6	5.2e-56
AOH59066.2|2316007_2316463_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	4.0e-79
AOH59583.1|2316621_2318100_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	98.2	2.5e-284
AOH59068.2|2318104_2319106_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	98.8	5.1e-188
AOH59525.1|2319102_2319360_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AOH59650.1|2319425_2319899_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	99.4	5.5e-84
AOH57626.2|2319903_2320650_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	100.0	4.4e-144
AOH57581.1|2320902_2322495_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AOH57792.1|2322866_2324060_+	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AOH57558.1|2324184_2325093_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
AOH57744.1|2325304_2326138_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	3.5e-158
AOH59652.1|2328135_2328489_-	camphor resistance protein CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	94.9	1.0e-21
AOH59677.1|2328485_2328851_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AUN01318.1|2329106_2329409_-	hypothetical protein	NA	NA	NA	NA	NA
AOH59470.1|2329668_2330382_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AOH59015.1|2330821_2331457_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AOH57725.1|2331752_2332196_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AUN01319.1|2332182_2332626_-	competence protein ComK	NA	NA	NA	NA	NA
AOH57570.1|2332738_2333209_-	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
AOH59248.1|2333407_2333632_+	hypothetical protein	NA	NA	NA	NA	NA
AOH58468.1|2333907_2334762_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AOH57670.1|2334848_2336141_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AUN01320.1|2336140_2336455_-	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
AOH59199.1|2336977_2338480_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	97.2	3.6e-28
AOH59196.2|2338972_2340004_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
AOH59950.1|2340010_2340643_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AOH58862.1|2340653_2341835_+	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AOH57686.1|2341847_2342312_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AOH59119.2|2342433_2343435_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
>prophage 7
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	2483611	2492651	2748803	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AOH57910.2|2483611_2484616_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
AOH58999.1|2484617_2485643_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AOH59556.1|2485665_2486805_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	1.6e-84
AOH59918.1|2486823_2487084_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AOH58880.1|2487358_2489638_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AOH58914.1|2489840_2492111_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	2.4e-63
AOH58897.1|2492132_2492651_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
>prophage 8
CP016856	Staphylococcus aureus subsp. aureus strain 2148.N chromosome, complete genome	2748803	2560430	2568760	2748803	tRNA	Caulobacter_phage(16.67%)	7	NA	NA
AOH59568.1|2560430_2562248_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.6e-54
AOH60216.1|2562471_2563578_+	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AOH58451.1|2563708_2564386_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AOH59960.1|2564388_2565489_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AOH59930.2|2565602_2566949_+	DEAD/DEAH box family ATP-dependent RNA helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
AOH58041.2|2566958_2567849_+	endonuclease	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
AUN01347.1|2567974_2568760_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
