The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP019701	Agrobacterium rhizogenes strain K599 chromosome 1, complete sequence	3003350	624985	632376	3003350	portal,tail,head,protease,capsid	Geobacillus_phage(33.33%)	11	NA	NA
AQS62301.1|624985_626152_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	38.7	3.5e-63
AQS62300.1|626347_626668_+	hypothetical protein	NA	NA	NA	NA	NA
AQS63265.1|626714_627287_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	43.8	2.6e-27
AQS62299.1|627323_628592_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	42.2	1.0e-76
AQS62298.1|628800_629370_+	hypothetical protein	NA	NA	NA	NA	NA
AQS62297.1|629373_629709_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AQS62296.1|629705_630101_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
AQS63263.1|630108_631218_-	MFS transporter	NA	NA	NA	NA	NA
AQS63262.1|631400_631808_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
AQS62295.1|631807_632167_+	gene transfer agent family protein	NA	NA	NA	NA	NA
AQS62294.1|632163_632376_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
>prophage 2
CP019701	Agrobacterium rhizogenes strain K599 chromosome 1, complete sequence	3003350	1241745	1249224	3003350	integrase	Brucella_phage(16.67%)	10	1244967:1244980	1251563:1251576
AQS61744.1|1241745_1242750_+	hypothetical protein	NA	A0A141GF09	Brucella_phage	31.9	2.5e-33
AQS61743.1|1242746_1243922_+	hypothetical protein	NA	A0A2H4J6I3	uncultured_Caudovirales_phage	37.2	2.3e-30
AQS61742.1|1243914_1244568_+	hypothetical protein	NA	A0A0U2BXG7	Paracoccus_phage	43.5	3.2e-37
AQS61741.1|1244564_1244768_+	hypothetical protein	NA	NA	NA	NA	NA
1244967:1244980	attL	CGGCGCTCTATGCC	NA	NA	NA	NA
AQS63194.2|1245136_1245370_+	hypothetical protein	NA	A0A0H5ARK7	Pseudomonas_phage	53.0	4.4e-10
AQS61740.1|1245369_1245633_+	hypothetical protein	NA	NA	NA	NA	NA
AQS61739.1|1245745_1245943_+	hypothetical protein	NA	NA	NA	NA	NA
AQS61738.2|1245951_1247019_+|integrase	integrase	integrase	G8DH71	Emiliania_huxleyi_virus	36.9	6.7e-61
AQS63193.2|1247358_1248090_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
AQS61737.1|1248156_1249224_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	43.8	7.4e-76
1251563:1251576	attR	GGCATAGAGCGCCG	NA	NA	NA	NA
>prophage 3
CP019701	Agrobacterium rhizogenes strain K599 chromosome 1, complete sequence	3003350	1394578	1402816	3003350	tRNA	uncultured_Mediterranean_phage(66.67%)	8	NA	NA
AQS61628.1|1394578_1396111_+	AMP-dependent synthetase	NA	A0A2K9KZV5	Tupanvirus	23.2	1.1e-19
AQS63170.1|1396190_1397372_+	type III PLP-dependent enzyme	NA	NA	NA	NA	NA
AQS61627.1|1397372_1398530_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	48.5	8.9e-43
AQS61626.1|1398726_1399857_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	52.7	3.0e-104
AQS61625.1|1399856_1400939_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AQS61624.1|1401176_1401686_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.1	1.2e-44
AQS61623.1|1401722_1402292_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	59.1	3.8e-47
AQS61622.1|1402321_1402816_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	39.6	1.3e-27
>prophage 4
CP019701	Agrobacterium rhizogenes strain K599 chromosome 1, complete sequence	3003350	1419318	1427696	3003350	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
AQS61607.1|1419318_1420929_-	LysM peptidoglycan-binding domain-containing protein	NA	I3PV24	Clostridium_phage	30.6	1.5e-11
AQS61606.1|1421229_1421871_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	35.1	1.0e-11
AQS61605.1|1421879_1422650_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.5	1.4e-23
AQS61604.1|1422823_1424107_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.3	4.1e-97
AQS61603.1|1424211_1425015_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.2	3.1e-42
AQS61602.1|1425011_1425731_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
AQS61601.1|1425788_1425995_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
AQS63166.2|1426123_1426858_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	1.7e-39
AQS61600.1|1426847_1427696_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.3	8.6e-35
>prophage 1
CP019702	Agrobacterium rhizogenes strain K599 chromosome 2, complete sequence	2276589	282742	291125	2276589		Enterobacteria_phage(50.0%)	7	NA	NA
AQS63602.1|282742_283312_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	43.5	1.2e-35
AQS63603.1|283314_284370_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.5	3.7e-96
AQS63604.1|284374_285268_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.4	3.3e-37
AQS63605.1|285264_286131_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	57.3	1.4e-93
AQS63606.1|286257_287103_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AQS63607.1|287129_288044_-	NAD-dependent epimerase/dehydratase family protein	NA	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	25.3	1.5e-21
AQS63608.1|288074_291125_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	30.1	4.5e-09
