The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020408	Vibrio cholerae strain FDAARGOS_223 chromosome 1, complete sequence	2969957	110312	116929	2969957		Staphylococcus_phage(66.67%)	7	NA	NA
ARB80153.1|110312_111446_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
ARB80154.1|111454_112708_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
ARB80155.1|112807_113257_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
ARB80156.1|113282_114386_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.1	1.3e-43
ARB80157.1|114390_115044_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
ARB80158.1|115084_116194_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
ARB80159.1|116458_116929_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
>prophage 2
CP020408	Vibrio cholerae strain FDAARGOS_223 chromosome 1, complete sequence	2969957	597011	603911	2969957	tail,transposase	Vibrio_phage(83.33%)	11	NA	NA
ARB80585.1|597011_597278_+	regulator of ribonuclease activity A	NA	M1Q554	Vibrio_phage	33.8	1.4e-07
ARB80586.1|597679_598054_+	transcriptional regulator	NA	NA	NA	NA	NA
ARB80587.1|598040_598361_+	transcriptional regulator	NA	NA	NA	NA	NA
ARB80588.1|598379_598958_+	glyoxalase	NA	NA	NA	NA	NA
ARB80589.1|599012_599390_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
ARB80590.1|599438_599798_+	hypothetical protein	NA	A0A2I7S9E0	Vibrio_phage	67.8	3.7e-40
ARB80591.1|599932_600973_+|tail	phage tail tape measure protein	tail	A0A2I7S9D9	Vibrio_phage	72.5	2.6e-126
AVI59687.1|601015_602192_+|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
ARB80592.1|602189_602885_+	chemotaxis protein	NA	A0A2I7S9D9	Vibrio_phage	35.4	1.2e-18
ARB80593.1|603114_603591_-	DNA repair protein RadC	NA	NA	NA	NA	NA
ARB80594.1|603704_603911_+	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	51.9	1.9e-09
>prophage 3
CP020408	Vibrio cholerae strain FDAARGOS_223 chromosome 1, complete sequence	2969957	960691	996026	2969957		Vibrio_phage(30.77%)	33	NA	NA
ARB80886.1|960691_960859_+	helicase	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
ARB80887.1|960851_961019_+	hypothetical protein	NA	NA	NA	NA	NA
ARB80888.1|961465_961630_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
ARB80889.1|962057_962624_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ARB80890.1|962785_964354_+	replication protein	NA	A7BJY2	Enterobacteria_phage	32.3	2.7e-58
ARB80891.1|964358_964643_+	hypothetical protein	NA	NA	NA	NA	NA
ARB80892.1|964772_965465_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ARB80893.1|965542_965710_+	helicase	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
ARB80894.1|965702_966287_+	DNA-binding protein	NA	E3U9I9	Vibrio_phage	100.0	6.4e-114
ARB80895.1|966283_966436_-	lipoate--protein ligase	NA	B1B6U1	Vibrio_virus	98.0	2.0e-19
ARB80896.1|966776_967115_-	transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
ARB80897.1|967240_968320_+	replication initiation factor family protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
AVI59698.1|968297_968681_+	hypothetical protein	NA	F1CC65	Vibrio_virus	100.0	4.8e-70
ARB80898.1|968816_969065_+	colonization factor	NA	A0A0N7F140	Vibrio_phage	100.0	8.8e-33
ARB80899.1|969075_970359_+	hypothetical protein	NA	A0A142I701	Vibrio_phage	100.0	9.1e-222
ARB80900.1|970355_970649_+	hypothetical protein	NA	A0A0F6YNQ7	Vibrio_phage	100.0	3.7e-46
ARB80901.1|970645_971845_+	Zona occludens toxin	NA	A0A142I6Z1	Vibrio_phage	100.0	5.3e-240
ARB80902.1|971943_972720_+	enterotoxin	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
ARB80903.1|972716_973091_+	enterotoxin	NA	Q77DH7	Vibrio_virus	100.0	7.8e-65
ARB80904.1|973199_973352_-	lipoate--protein ligase	NA	B1B6U1	Vibrio_virus	100.0	4.0e-20
ARB80905.1|973692_974031_-	transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
ARB80906.1|974156_975236_+	replication initiation factor family protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
ARB80907.1|975213_975588_+	hypothetical protein	NA	B9V3G5	Vibrio_virus	100.0	1.2e-68
ARB80908.1|975681_975906_+	RstC protein	NA	U5TMI6	Satellite_phage	100.0	1.1e-34
ARB80909.1|975924_976077_-	lipoate--protein ligase	NA	B1B6U1	Vibrio_virus	100.0	4.0e-20
ARB80910.1|976417_976756_-	transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
ARB80911.1|976881_977961_+	replication initiation factor family protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
ARB80912.1|977938_978313_+	hypothetical protein	NA	B9V3G5	Vibrio_virus	100.0	1.2e-68
ARB80913.1|978406_978631_+	RstC protein	NA	U5TMI6	Satellite_phage	100.0	1.1e-34
AVI59699.1|978998_992675_-	multifunctional autoprocessing toxin RtxA	NA	B3Y8K3	Vibrio_virus	100.0	8.4e-07
ARB80914.1|992659_993121_-	toxin-activating lysine-acyltransferase RtxC	NA	NA	NA	NA	NA
ARB80915.1|993146_993506_-	peptide chain release factor 1	NA	NA	NA	NA	NA
ARB80916.1|993863_996026_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	27.1	5.0e-39
>prophage 4
CP020408	Vibrio cholerae strain FDAARGOS_223 chromosome 1, complete sequence	2969957	1734397	1741590	2969957		Anguillid_herpesvirus(16.67%)	9	NA	NA
ARB81545.1|1734397_1734826_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
ARB81546.1|1735029_1736319_-	peptidase B	NA	Q6GYZ8	Mycoplasma_phage	34.3	1.7e-34
ARB81547.1|1736538_1736733_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
ARB81548.1|1736781_1737120_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
ARB81549.1|1737133_1738984_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	5.3e-106
ARB81550.1|1739007_1739523_-	co-chaperone protein HscB	NA	NA	NA	NA	NA
ARB81551.1|1739571_1739895_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
ARB81552.1|1739955_1740339_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
ARB81553.1|1740375_1741590_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
>prophage 5
CP020408	Vibrio cholerae strain FDAARGOS_223 chromosome 1, complete sequence	2969957	1973218	1980481	2969957		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
ARB81739.1|1973218_1974106_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
ARB81740.1|1974373_1976962_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
ARB81741.1|1977054_1978062_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
ARB81742.1|1978135_1979071_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
ARB81743.1|1979070_1979697_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
ARB81744.1|1979689_1980481_-	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.6	8.4e-69
>prophage 1
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	0	7018	1072312		Agrobacterium_phage(100.0%)	5	NA	NA
ARB79038.1|1840_2500_+	HAD family phosphatase	NA	NA	NA	NA	NA
ARB79039.1|2675_4232_+	EAL domain-containing protein	NA	NA	NA	NA	NA
ARB79040.1|4231_4603_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
ARB79041.1|4639_5680_-	oxidoreductase	NA	NA	NA	NA	NA
ARB79042.1|5710_7018_-	nicotinate phosphoribosyltransferase	NA	A0A2L0UZQ6	Agrobacterium_phage	31.7	6.5e-42
>prophage 2
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	11235	11865	1072312		Vibrio_phage(100.0%)	1	NA	NA
ARB79047.1|11235_11865_+	cobinamide adenolsyltransferase	NA	A0A2I7SAF7	Vibrio_phage	35.6	3.7e-19
>prophage 3
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	20148	35071	1072312		uncultured_Caudovirales_phage(28.57%)	13	NA	NA
ARB79056.1|20148_21972_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	27.5	5.0e-08
ARB79057.1|22089_23382_-	peptidase M23	NA	Q8SBN9	Clostridium_phage	51.1	1.1e-17
ARB79058.1|23573_23906_-	1,4-alpha-glucan branching protein	NA	NA	NA	NA	NA
ARB79059.1|24210_25872_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	25.4	3.4e-43
ARB79060.1|26306_27683_+	hypothetical protein	NA	NA	NA	NA	NA
ARB80033.1|27846_28035_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79061.1|27973_28441_+	oxidoreductase	NA	NA	NA	NA	NA
AVI59607.1|28437_29538_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	30.6	5.7e-15
ARB79062.1|29584_30364_-	phosphate ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	28.0	1.1e-12
ARB79063.2|30368_31232_-	phosphate ABC transporter permease PtsA	NA	NA	NA	NA	NA
ARB79064.1|31237_32158_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
ARB79065.1|32235_33057_-	phosphate ABC transporter substrate-binding protein	NA	Q58MA7	Prochlorococcus_phage	27.9	1.0e-08
ARB79066.1|33427_35071_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	46.8	1.6e-24
>prophage 4
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	41657	49235	1072312		Organic_Lake_phycodnavirus(25.0%)	6	NA	NA
ARB79069.1|41657_43655_-	S9 family peptidase	NA	F2Y2S4	Organic_Lake_phycodnavirus	30.1	9.4e-08
ARB79070.1|43867_45226_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.0	2.6e-41
ARB79071.1|45755_46004_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79072.1|46089_47010_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
ARB79073.1|47018_48428_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	31.7	2.0e-60
ARB79074.1|48437_49235_-	helix-turn-helix-type transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	31.2	1.5e-17
>prophage 5
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	54366	55947	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79079.1|54366_55947_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	41.3	3.3e-16
>prophage 6
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	73316	79495	1072312		uncultured_Caudovirales_phage(50.0%)	5	NA	NA
ARB79094.1|73316_74882_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.8	3.1e-14
ARB79095.1|75002_75845_-	arginase	NA	NA	NA	NA	NA
ARB79096.1|75845_76580_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
ARB79097.1|76669_76924_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79098.1|76945_79495_-	chitinase	NA	B0FDP2	Orgyia_leucostigma_nucleopolyhedrovirus	46.5	2.0e-143
>prophage 7
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	90018	92103	1072312		Ralstonia_phage(100.0%)	1	NA	NA
ARB79107.1|90018_92103_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	26.7	5.7e-32
>prophage 8
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	97804	100258	1072312		Iris_mild_mosaic_virus(100.0%)	1	NA	NA
ARB79112.1|97804_100258_-	glycogen/starch/alpha-glucan phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	2.0e-15
>prophage 9
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	104243	106884	1072312		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
ARB79116.1|104243_105905_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	43.6	8.6e-23
ARB79117.1|106008_106884_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	28.2	2.9e-22
>prophage 10
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	112629	118171	1072312	tRNA	Enterobacteria_phage(33.33%)	4	NA	NA
ARB79124.1|112629_113847_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	28.8	5.5e-35
ARB79125.1|113854_114826_+	chromosome partitioning protein ParB	NA	Q6UAV8	Klebsiella_phage	32.4	8.9e-20
ARB79126.1|114885_115917_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79127.1|116044_118171_+|tRNA	tRNA cytosine(34) acetyltransferase TmcA	tRNA	Q56AQ2	Bacillus_thuringiensis_phage	32.4	2.7e-13
>prophage 11
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	126798	128259	1072312		Bacillus_virus(100.0%)	1	NA	NA
ARB79134.1|126798_128259_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	1.3e-14
>prophage 12
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	131980	132358	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79139.1|131980_132358_+	response regulator	NA	W8CYM9	Bacillus_phage	36.8	2.6e-12
>prophage 13
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	140177	147549	1072312		Bacillus_phage(66.67%)	5	NA	NA
AVI59612.1|140177_141332_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.1	3.8e-09
ARB79147.1|141341_141641_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
ARB79148.1|141664_143371_+	two-component system sensor histidine kinase/response regulator	NA	W8CYM9	Bacillus_phage	33.1	8.9e-07
ARB79149.1|143629_145300_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
ARB79150.1|145434_147549_-	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	26.8	1.2e-32
>prophage 14
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	152429	157827	1072312		Vibrio_virus(33.33%)	4	NA	NA
ARB79155.1|152429_153170_-	helix-turn-helix transcriptional regulator	NA	A2I306	Vibrio_virus	42.9	3.2e-38
ARB79156.1|153488_155306_-	PEGA domain-containing protein	NA	A0A7F1	Microcystis_virus	42.1	3.1e-18
ARB79157.1|155465_156605_-	PEGA domain-containing protein	NA	NA	NA	NA	NA
ARB79158.1|156963_157827_+	AraC family transcriptional regulator	NA	A0A291LAM3	Bordetella_phage	39.0	6.5e-06
>prophage 15
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	164303	166223	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79163.1|164303_166223_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.0	3.2e-21
>prophage 16
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	173508	176713	1072312	tRNA	Staphylococcus_phage(33.33%)	4	NA	NA
ARB79171.1|173508_174165_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	42.3	2.0e-39
ARB79172.1|174229_174847_-|tRNA	tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY	tRNA	NA	NA	NA	NA
ARB79173.1|174940_175846_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	30.1	1.4e-06
ARB79174.1|175993_176713_+	SDR family NAD(P)-dependent oxidoreductase	NA	W8CYX9	Bacillus_phage	30.1	1.9e-06
>prophage 17
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	184105	184984	1072312		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
ARB79182.1|184105_184984_+	MBL fold metallo-hydrolase	NA	F2NZ47	Diadromus_pulchellus_ascovirus	29.4	1.7e-22
>prophage 18
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	190550	204648	1072312		uncultured_Caudovirales_phage(33.33%)	13	NA	NA
AVI59613.1|190550_191492_+	M23 family peptidase	NA	E5G070	Clostridium_phage	46.0	5.4e-14
ARB79188.1|191401_191803_+	polymer-forming cytoskeletal family protein	NA	NA	NA	NA	NA
ARB79189.1|191861_193565_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	36.4	7.1e-89
ARB79190.1|193677_194574_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
ARB79191.1|194574_195411_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79192.1|195446_196247_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
ARB79193.1|196243_196963_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.3	1.7e-28
ARB80036.1|197264_198317_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B6VT43	Edwardsiella_phage	47.4	1.5e-81
ARB79194.1|198410_198659_-	DUF3297 domain-containing protein	NA	NA	NA	NA	NA
ARB79195.2|198862_200842_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.7	1.1e-24
ARB79196.1|200850_202227_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79197.1|202494_202902_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79198.1|203016_204648_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.8	2.7e-21
>prophage 19
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	218760	219234	1072312		Streptococcus_phage(100.0%)	1	NA	NA
ARB79210.1|218760_219234_+	cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	51.0	1.4e-31
>prophage 20
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	222945	223584	1072312		Pseudoalteromonas_phage(100.0%)	1	NA	NA
ARB79215.1|222945_223584_-	glutaredoxin	NA	A0A1W5PTL2	Pseudoalteromonas_phage	42.3	6.1e-09
>prophage 21
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	233326	235186	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79228.1|233326_235186_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.3	3.3e-31
>prophage 22
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	239551	246759	1072312		Diachasmimorpha_longicaudata_entomopoxvirus(33.33%)	4	NA	NA
ARB79233.1|239551_240838_+	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	5.3e-44
ARB79234.1|240916_242251_-	MATE family efflux transporter	NA	NA	NA	NA	NA
ARB79235.1|242608_244165_-	chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	56.2	1.6e-42
ARB79236.1|244347_246759_-	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	37.6	1.5e-172
>prophage 23
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	256537	259959	1072312		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
ARB79244.1|256537_257422_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.5	1.3e-17
ARB79245.1|257441_258173_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79246.1|258339_259959_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	3.9e-20
>prophage 24
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	263260	264946	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79249.1|263260_264946_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.5	7.7e-27
>prophage 25
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	274038	280024	1072312		Bacillus_phage(66.67%)	6	NA	NA
ARB79260.1|274038_274647_-	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	S4W3Y0	Pandoravirus	36.2	2.4e-23
ARB79261.1|274988_276362_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.3	2.2e-16
ARB79262.1|276535_276745_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79263.1|276641_278159_-	DUF3612 domain-containing protein	NA	NA	NA	NA	NA
ARB79264.1|278277_278886_+	malate synthase	NA	NA	NA	NA	NA
AVI59615.1|279004_280024_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.1	1.8e-15
>prophage 26
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	285116	286982	1072312		Bacillus_phage(50.0%)	2	NA	NA
ARB79272.1|285116_285638_-	spermidine N1-acetyltransferase	NA	O64026	Bacillus_phage	28.2	8.4e-09
ARB79273.1|285860_286982_-	maltose/maltodextrin import ATP-binding protein MalK	NA	G3M9Y6	Bacillus_virus	32.8	4.8e-25
>prophage 27
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	293624	294590	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79280.1|293624_294590_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	33.3	4.1e-17
>prophage 28
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	298563	302796	1072312		Morganella_phage(50.0%)	4	NA	NA
ARB79286.1|298563_298776_-	cold-shock protein CspV	NA	A0A1W6JNX5	Morganella_phage	68.6	8.7e-21
ARB79287.1|299124_300507_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
ARB79288.1|300619_301555_+	DUF808 domain-containing protein	NA	NA	NA	NA	NA
ARB79289.1|301668_302796_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	D0R096	Streptococcus_phage	28.5	1.1e-29
>prophage 29
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	308443	310318	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79295.1|308443_310318_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	62.0	2.4e-21
>prophage 30
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	314639	315419	1072312		Brazilian_cedratvirus(100.0%)	1	NA	NA
ARB79301.1|314639_315419_-	hemin import ATP-binding protein HmuV	NA	A0A2R8FG22	Brazilian_cedratvirus	23.7	6.7e-10
>prophage 31
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	322161	334624	1072312		Cyanophage(40.0%)	11	NA	NA
ARB79309.1|322161_323898_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.8	1.1e-25
ARB79310.1|324038_325178_+	CdaR family transcriptional regulator	NA	NA	NA	NA	NA
ARB79311.1|325336_326689_+	GntP family permease	NA	NA	NA	NA	NA
AVI59618.1|326707_327841_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.2	4.2e-45
ARB79312.1|327976_328813_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79313.1|328845_329475_-	DsbA family protein	NA	NA	NA	NA	NA
ARB79314.1|329468_330383_-	MBL fold metallo-hydrolase	NA	F2NZ47	Diadromus_pulchellus_ascovirus	28.1	1.0e-17
ARB79315.1|330650_330788_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79316.1|330943_332392_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	M4SJX8	Cyanophage	33.6	3.0e-32
AVI59619.1|332405_333122_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
ARB79317.2|333118_334624_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.5	1.1e-85
>prophage 32
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	344725	346953	1072312		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
ARB79326.1|344725_345919_+	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	29.1	6.0e-42
ARB79327.1|345921_346953_+	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	92.3	7.7e-22
>prophage 33
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	352788	354134	1072312	integrase	Vibrio_phage(50.0%)	2	348637:348652	359760:359775
348637:348652	attL	CTTGCTGGATCTGTGC	NA	NA	NA	NA
ARB79335.1|352788_352950_-|integrase	integrase	integrase	R9TMP3	Vibrio_phage	83.0	1.4e-18
AVI59621.1|353057_354134_-	linear amide C-N hydrolase	NA	A0A1J0F9I3	Only_Syngen_Nebraska_virus	24.3	1.1e-07
359760:359775	attR	CTTGCTGGATCTGTGC	NA	NA	NA	NA
>prophage 34
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	364159	364342	1072312		Vibrio_phage(100.0%)	1	NA	NA
ARB80037.1|364159_364342_-	hypothetical protein	NA	U3PCF7	Vibrio_phage	57.6	7.4e-13
>prophage 35
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	367566	368847	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79345.1|367566_368847_-	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	54.5	2.7e-16
>prophage 36
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	377783	378467	1072312		Planktothrix_phage(100.0%)	1	NA	NA
ARB79353.1|377783_378467_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	1.2e-34
>prophage 37
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	381699	382779	1072312		Enterobacteria_phage(100.0%)	1	NA	NA
ARB79356.1|381699_382779_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.3	1.2e-17
>prophage 38
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	393946	394927	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79359.1|393946_394927_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	30.2	2.9e-10
>prophage 39
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	399772	400258	1072312		Xanthomonas_phage(100.0%)	1	NA	NA
ARB79363.1|399772_400258_-	cell division protein DedD	NA	A0A292GIT0	Xanthomonas_phage	41.0	3.0e-24
>prophage 40
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	413656	419026	1072312		Klosneuvirus(33.33%)	6	NA	NA
ARB79375.1|413656_414922_+	diaminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	23.1	8.6e-15
ARB79376.1|414957_415374_+	L-ectoine synthase	NA	NA	NA	NA	NA
ARB79377.1|415370_416795_+	aspartate kinase	NA	NA	NA	NA	NA
ARB79378.1|416875_417082_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79379.1|417114_418707_-	molecular chaperone GroEL	NA	A0A2I7SAK5	Vibrio_phage	63.4	4.2e-176
ARB79380.1|418735_419026_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	39.2	2.2e-11
>prophage 41
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	423494	424424	1072312		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
ARB79383.1|423494_424424_+	agmatinase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	25.9	1.6e-05
>prophage 42
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	427909	439492	1072312	protease	Apis_mellifera_filamentous_virus(20.0%)	8	NA	NA
ARB80041.1|427909_429367_-	N-acetylglucosamine-binding protein GbpA	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	32.1	2.9e-14
ARB79386.1|429860_431411_+	cryptochrome/photolyase family protein	NA	A0A1V0SE91	Indivirus	28.2	2.2e-49
ARB79387.1|431684_432377_+	MaoC family dehydratase	NA	NA	NA	NA	NA
ARB79388.1|432522_433359_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79389.1|433446_433920_+	DUF3024 domain-containing protein	NA	NA	NA	NA	NA
ARB79390.1|434014_436051_-	exoribonuclease 2	NA	Q0GXV6	Lactococcus_phage	25.8	2.4e-30
ARB79391.1|436364_438356_+	DEAD/DEAH box family ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.2	4.9e-49
ARB79392.1|438499_439492_+|protease	serine protease	protease	V5LQ17	Emiliania_huxleyi_virus	32.2	1.3e-10
>prophage 43
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	443055	449076	1072312	transposase	Vibrio_phage(33.33%)	8	NA	NA
ARB79395.1|443055_443538_-	hypothetical protein	NA	A0A2I7SAK3	Vibrio_phage	36.2	3.4e-20
ARB79396.1|443859_444366_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79397.1|444504_445185_+	HAD family hydrolase	NA	NA	NA	NA	NA
ARB79398.1|445380_445602_-	transcription initiation factor TFIIIB	NA	NA	NA	NA	NA
ARB79399.1|445839_446796_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	35.8	7.4e-19
ARB79400.1|447010_447304_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79401.1|447304_447787_-	Rha family transcriptional regulator	NA	NA	NA	NA	NA
AVI59628.1|447899_449076_+|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
>prophage 44
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	457955	462632	1072312		Planktothrix_phage(50.0%)	3	NA	NA
ARB79410.1|457955_458633_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.2	1.5e-29
ARB79411.1|458629_461077_+	ABC transporter permease	NA	NA	NA	NA	NA
ARB79412.1|461465_462632_+	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	52.4	9.4e-109
>prophage 45
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	467038	488010	1072312		uncultured_Caudovirales_phage(22.22%)	21	NA	NA
ARB79418.1|467038_468055_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	45.9	5.0e-82
ARB79419.1|468140_469562_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	49.3	2.8e-06
ARB79420.1|469789_470992_-	tyrosine transporter TyrP	NA	NA	NA	NA	NA
ARB79421.1|471355_471475_+	hypothetical protein	NA	NA	NA	NA	NA
ARB79422.1|471511_472093_+	ACP phosphodiesterase	NA	NA	NA	NA	NA
ARB79423.1|472129_473398_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	3.4e-51
ARB79424.1|473497_474232_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
ARB79425.1|474335_474644_-	cytochrome C554	NA	NA	NA	NA	NA
ARB79426.1|474772_475804_-	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
ARB79427.1|475788_476346_-	NUDIX hydrolase	NA	Q5ULM8	Lactobacillus_virus	31.7	2.0e-08
ARB79428.1|476655_478314_+	AAA family ATPase	NA	A0A2H4PB07	Aphanizomenon_phage	27.5	6.6e-31
ARB79429.1|478322_479768_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA	NA
ARB80042.1|480360_481089_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	35.3	3.1e-25
ARB79430.1|481162_481894_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79431.1|481895_482585_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
ARB79432.1|482581_483250_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
ARB79433.1|483302_484208_-	LysR family transcriptional regulator	NA	A0A2H4J8I9	uncultured_Caudovirales_phage	36.0	3.6e-07
ARB79434.1|484382_484883_+	lactoylglutathione lyase family protein	NA	NA	NA	NA	NA
ARB79435.1|485317_486148_-	lipase	NA	Q6XLV5	Feldmannia_irregularis_virus	27.0	7.4e-07
ARB79436.1|486232_487387_-	MFS transporter	NA	NA	NA	NA	NA
ARB79437.1|487575_488010_-	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	41.6	8.0e-13
>prophage 46
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	494251	495106	1072312		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
ARB79442.1|494251_495106_+	aquaporin family protein	NA	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	30.3	1.1e-13
>prophage 47
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	498911	504376	1072312		Invertebrate_iridovirus(50.0%)	4	NA	NA
ARB79449.1|498911_499217_+	GIY-YIG nuclease family protein	NA	W8W2G4	Invertebrate_iridovirus	44.9	1.1e-11
ARB79450.1|499318_500479_+	type IX secretion system membrane protein PorP/SprF	NA	NA	NA	NA	NA
ARB79451.1|500690_501785_+	autoinducer 2-binding periplasmic protein LuxP	NA	NA	NA	NA	NA
ARB79452.1|501802_504376_+	autoinducer 2 sensor kinase/phosphatase LuxQ	NA	A0A1V0SGX0	Hokovirus	33.5	6.4e-49
>prophage 48
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	515810	532028	1072312		Planktothrix_phage(20.0%)	15	NA	NA
ARB79463.1|515810_516911_+	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.3	6.3e-22
ARB79464.1|517009_518320_-	3-hydroxy-3-methylglutaryl-CoA reductase	NA	NA	NA	NA	NA
ARB79465.1|518349_518640_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79466.1|518696_518858_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79467.1|519135_519711_+	guanylate cyclase	NA	NA	NA	NA	NA
ARB79468.1|519707_520655_+	two-component sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	26.2	2.1e-10
ARB79469.1|520664_522842_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
ARB80043.1|523028_525092_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	26.5	5.7e-24
AVI59630.1|525147_525684_-	cytochrome B	NA	NA	NA	NA	NA
ARB79470.1|525676_525994_-	cytochrome B	NA	NA	NA	NA	NA
ARB79471.1|526133_526490_-	diacylglycerol kinase	NA	NA	NA	NA	NA
ARB79472.1|526794_527415_+	bifunctional nicotinamidase/pyrazinamidase	NA	A0A2K9L6K4	Tupanvirus	37.6	7.7e-25
ARB79473.1|527483_527939_-	methylglyoxal synthase	NA	NA	NA	NA	NA
ARB79474.1|527993_529043_-	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA	NA
ARB79475.1|529073_532028_+	TMAO reductase system sensor histidine kinase/response regulator TorS	NA	A0A1V0SGX0	Hokovirus	35.9	4.9e-53
>prophage 49
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	542864	549740	1072312		Chrysodeixis_chalcites_nucleopolyhedrovirus(33.33%)	3	NA	NA
AVI59632.1|542864_546020_+	chitinase	NA	Q4KT15	Chrysodeixis_chalcites_nucleopolyhedrovirus	24.8	2.5e-23
ARB79483.1|546285_547509_-	glucose-1-phosphate adenylyltransferase	NA	I7I009	Enterobacteria_phage	24.0	1.4e-09
ARB79484.1|547811_549740_-	sensory histidine kinase	NA	A0A127AWB9	Bacillus_phage	40.0	2.5e-21
>prophage 50
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	553214	555528	1072312		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
ARB79488.1|553214_554117_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.6	1.4e-35
ARB79489.1|554787_555528_+	SDR family NAD(P)-dependent oxidoreductase	NA	A0A0K0KVL6	Prochlorococcus_phage	25.4	1.2e-08
>prophage 51
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	559041	560097	1072312		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
ARB79492.1|559041_560097_-	Fe(3+) ions import ATP-binding protein FbpC	NA	F2Y165	Organic_Lake_phycodnavirus	29.0	1.2e-09
>prophage 52
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	575719	576751	1072312		Enterobacteria_phage(100.0%)	1	NA	NA
ARB79507.1|575719_576751_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.5	4.7e-19
>prophage 53
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	584530	590265	1072312		uncultured_Caudovirales_phage(50.0%)	5	NA	NA
ARB79514.1|584530_586294_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.6	4.4e-33
ARB79515.1|586440_587079_+	beta-phosphoglucomutase family hydrolase	NA	NA	NA	NA	NA
ARB79516.1|587159_587633_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
ARB79517.1|587845_588469_+	OmpA family protein	NA	NA	NA	NA	NA
ARB79518.1|588654_590265_+	methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	45.3	1.2e-29
>prophage 54
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	595066	596059	1072312		Enterobacteria_phage(100.0%)	1	NA	NA
ARB79522.1|595066_596059_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.4	4.8e-21
>prophage 55
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	616588	617560	1072312		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
ARB79547.1|616588_617560_+	D-3-phosphoglycerate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	24.9	3.9e-15
>prophage 56
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	621495	622008	1072312		Rhodococcus_phage(100.0%)	1	NA	NA
ARB79550.1|621495_622008_-	23S rRNA methyltransferase	NA	A0A2D1A6G0	Rhodococcus_phage	30.9	2.2e-09
>prophage 57
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	626783	627734	1072312		Cyanophage(100.0%)	1	NA	NA
ARB79553.1|626783_627734_-	transaldolase	NA	A0A127KNC6	Cyanophage	31.1	3.3e-11
>prophage 58
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	630810	633618	1072312		Pandoravirus(50.0%)	3	NA	NA
ARB79558.1|630810_631575_-	molybdopterin-synthase adenylyltransferase MoeB	NA	S4VW33	Pandoravirus	34.1	1.3e-10
ARB79559.1|631577_632813_-	molybdopterin molybdotransferase	NA	NA	NA	NA	NA
ARB79560.1|632964_633618_+	GTP cyclohydrolase I FolE	NA	Q6WI31	Vibrio_phage	54.7	1.1e-53
>prophage 59
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	640843	645980	1072312		Mycobacterium_phage(50.0%)	4	NA	NA
ARB79569.1|640843_642241_-	aspartate aminotransferase family protein	NA	A0A249XSK4	Mycobacterium_phage	29.1	2.9e-11
ARB79570.1|642258_643362_-	2-aminoethylphosphonate--pyruvate aminotransferase	NA	NA	NA	NA	NA
ARB79571.1|643593_644613_+	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB79572.1|644768_645980_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.3	3.1e-30
>prophage 60
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	653693	654254	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79580.1|653693_654254_+	DNA mismatch repair protein MutT	NA	A0A2H4J8B3	uncultured_Caudovirales_phage	47.6	2.3e-28
>prophage 61
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	658427	660020	1072312		Planktothrix_phage(100.0%)	1	NA	NA
ARB79584.1|658427_660020_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.3	7.7e-21
>prophage 62
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	679465	680122	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79606.1|679465_680122_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.2	4.2e-29
>prophage 63
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	685933	691499	1072312		Bacillus_phage(100.0%)	4	NA	NA
ARB79612.1|685933_687172_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.7	1.2e-13
ARB79613.1|687168_688152_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79614.1|688226_689795_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
ARB79615.1|690089_691499_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.6	7.3e-15
>prophage 64
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	699613	700570	1072312		Escherichia_phage(100.0%)	1	NA	NA
ARB79623.1|699613_700570_-	DUF475 domain-containing protein	NA	A0A1D7XFL1	Escherichia_phage	32.2	1.6e-34
>prophage 65
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	714363	715857	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79636.1|714363_715857_-	sensor histidine kinase KdpD	NA	W8CYF6	Bacillus_phage	30.2	8.6e-22
>prophage 66
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	719296	721159	1072312		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
ARB79638.1|719296_721159_-	potassium transporter Kup	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	32.6	1.9e-66
>prophage 67
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	728055	734395	1072312		Bacillus_phage(66.67%)	3	NA	NA
ARB79645.1|728055_730116_-	hybrid sensor histidine kinase/response regulator	NA	W8CYM9	Bacillus_phage	33.9	7.2e-11
ARB79646.1|730212_733254_-	SMC family ATPase	NA	G3MAB6	Bacillus_virus	24.2	3.9e-05
ARB79647.1|733255_734395_-	exonuclease SbcCD subunit D	NA	A0A217ER54	Bacillus_phage	24.5	2.6e-10
>prophage 68
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	741966	744559	1072312		Vibrio_virus(50.0%)	2	NA	NA
ARB79654.1|741966_742434_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A2H5BH04	Vibrio_virus	64.3	4.1e-55
ARB79655.1|742438_744559_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	64.7	3.5e-271
>prophage 69
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	748217	749395	1072312	transposase	Shigella_phage(100.0%)	1	NA	NA
AVI59634.1|748217_749395_-|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
>prophage 70
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	754748	758442	1072312	transposase	Aeromonas_virus(33.33%)	6	NA	NA
ARB79666.1|754748_755621_-	DUF3800 domain-containing protein	NA	A5X9G9	Aeromonas_virus	50.7	7.4e-74
ARB79667.1|755795_756014_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
ARB79668.1|756077_756515_-|transposase	IS200/IS605-like element IS1004 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	34.9	7.5e-19
ARB79669.1|756558_756843_-	acetyltransferase	NA	NA	NA	NA	NA
ARB79670.1|756978_757368_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79671.1|757524_758442_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	32.1	5.4e-27
>prophage 71
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	764321	768249	1072312	transposase	Escherichia_phage(50.0%)	8	NA	NA
ARB79682.1|764321_764612_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	54.8	7.7e-20
ARB79683.1|764598_764871_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
ARB79684.1|765063_765477_-	VOC family protein	NA	NA	NA	NA	NA
AVI59663.1|765551_765662_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
ARB79685.1|765664_766066_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A222YZ88	Escherichia_phage	29.8	9.4e-08
ARB79686.1|766065_766758_-	N-acetyltransferase	NA	NA	NA	NA	NA
ARB79687.1|766928_767246_-	antibiotic acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	58.9	2.2e-20
ARB79688.1|767268_768249_+|transposase	IS5 family transposase ISVch5	transposase	Q38213	Escherichia_phage	82.2	3.0e-156
>prophage 72
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	775453	776311	1072312		Sinorhizobium_phage(100.0%)	1	NA	NA
ARB79704.1|775453_776311_-	DUF2806 domain-containing protein	NA	A0A291AUV8	Sinorhizobium_phage	42.3	1.7e-43
>prophage 73
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	783802	786206	1072312		Brevibacillus_phage(33.33%)	5	NA	NA
ARB79715.1|783802_784495_-	site-specific DNA-methyltransferase	NA	S5MBX9	Brevibacillus_phage	37.5	1.1e-27
ARB79716.1|784570_784762_-	hemagglutinin	NA	NA	NA	NA	NA
ARB79717.1|785026_785275_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
ARB79718.1|785264_785555_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	54.3	1.6e-17
ARB79719.1|785690_786206_-	lipocalin	NA	A0A1W6JNX6	Morganella_phage	48.8	5.0e-46
>prophage 74
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	791478	792336	1072312		Salmonella_phage(100.0%)	1	NA	NA
ARB79728.1|791478_792336_-	DUF2971 domain-containing protein	NA	J9Q7Y9	Salmonella_phage	26.7	1.5e-10
>prophage 75
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	806252	806768	1072312		Morganella_phage(100.0%)	1	NA	NA
ARB79754.1|806252_806768_-	lipocalin	NA	A0A1W6JNX6	Morganella_phage	49.4	2.2e-46
>prophage 76
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	814809	815491	1072312		Escherichia_phage(100.0%)	2	NA	NA
ARB79770.1|814809_815127_-	transcriptional regulator	NA	A0A222YWD7	Escherichia_phage	46.2	5.3e-14
ARB79771.1|815137_815491_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A222YWE2	Escherichia_phage	57.6	2.0e-25
>prophage 77
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	826489	829034	1072312	transposase	Shigella_phage(66.67%)	3	NA	NA
AVI59646.1|826489_827666_+|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
AVI59647.1|827663_828359_+	chemotaxis protein	NA	A0A2I7S9D9	Vibrio_phage	35.4	1.2e-18
ARB79786.1|828419_829034_-	hypothetical protein	NA	S5FXQ0	Shigella_phage	28.5	6.7e-05
>prophage 78
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	840340	840856	1072312		Morganella_phage(100.0%)	1	NA	NA
ARB79807.1|840340_840856_-	lipocalin	NA	A0A1W6JNX6	Morganella_phage	49.4	1.0e-46
>prophage 79
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	859112	859628	1072312		Morganella_phage(100.0%)	1	NA	NA
ARB79839.1|859112_859628_-	lipocalin	NA	A0A1W6JNX6	Morganella_phage	48.8	2.2e-46
>prophage 80
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	868004	869542	1072312		Diadromus_pulchellus_ascovirus(50.0%)	3	NA	NA
ARB79855.1|868004_868757_-	short chain dehydrogenase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.6	3.7e-21
AVI59655.1|868760_868856_-	acetyltransferase	NA	NA	NA	NA	NA
ARB79856.1|868912_869542_-	type B-5 chloramphenicol O-acetyltransferase CatB9	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	37.8	5.8e-20
>prophage 82
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	907844	908516	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79896.1|907844_908516_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	30.8	8.6e-22
>prophage 83
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	912219	912918	1072312		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
ARB79899.1|912219_912918_-	antibiotic acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	37.1	1.7e-17
>prophage 84
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	924459	926923	1072312		Bacillus_phage(50.0%)	2	NA	NA
ARB79912.1|924459_926109_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	26.5	5.4e-17
ARB79913.1|926353_926923_+	phosphoribosyl-AMP cyclohydrolase	NA	M4QRU0	Micromonas_pusilla_virus	35.3	1.2e-19
>prophage 85
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	932386	935032	1072312		Bacillus_virus(50.0%)	3	NA	NA
ARB79919.1|932386_933151_-	iron(III) ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.8	6.8e-15
ARB79920.1|933153_934104_-	iron(III) ABC transporter permease	NA	NA	NA	NA	NA
ARB79921.1|934093_935032_-	iron(III) ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	43.9	1.1e-70
>prophage 86
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	943091	944738	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79928.1|943091_944738_-	methyl-accepting chemotaxis protein HlyB	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.4	3.3e-22
>prophage 87
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	949608	950688	1072312		Bacillus_phage(100.0%)	1	NA	NA
ARB79931.1|949608_950688_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	32.8	3.8e-19
>prophage 88
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	955688	965027	1072312	transposase	Bacillus_phage(25.0%)	10	NA	NA
ARB79936.1|955688_957635_+	ATP-binding protein	NA	W8CYF6	Bacillus_phage	23.3	7.3e-05
ARB79937.1|957692_959261_-	transcriptional regulator	NA	NA	NA	NA	NA
ARB79938.1|959367_959550_-	hypothetical protein	NA	NA	NA	NA	NA
ARB79939.1|959500_960028_-	nicotinate-nicotinamide nucleotide adenylyltransferase	NA	NA	NA	NA	NA
ARB79940.1|960130_960961_+	NAD(+) synthetase	NA	G3MA24	Bacillus_virus	47.4	2.4e-58
ARB79941.1|961211_962540_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
ARB79942.1|962729_964085_+	ATP-dependent RNA helicase RhlE	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.4	1.7e-48
ARB80065.1|964233_964458_+	HNH endonuclease	NA	NA	NA	NA	NA
ARB79943.1|964432_964546_+	rfbP protein	NA	NA	NA	NA	NA
ARB79944.1|964589_965027_+|transposase	IS200/IS605 family transposase IS1004	transposase	Q331U4	Clostridium_botulinum_C_phage	40.8	1.9e-22
>prophage 89
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	969126	976282	1072312		Bacillus_phage(25.0%)	7	NA	NA
ARB79948.1|969126_970278_-	DNA cytosine methyltransferase	NA	A0A1P8CX13	Bacillus_phage	26.3	2.9e-25
ARB79949.1|970601_971645_-	guanosine monophosphate reductase	NA	A0A0N9Q9A5	Chrysochromulina_ericina_virus	53.6	1.8e-98
ARB79950.1|971809_972187_+	hypothetical protein	NA	NA	NA	NA	NA
AVI59659.1|972302_972851_+	hypothetical protein	NA	NA	NA	NA	NA
AVI59660.1|972916_973759_+	potassium channel protein	NA	A0A1B0Y2S3	Lactobacillus_phage	44.0	7.5e-07
ARB79951.1|973760_975104_-	sodium:proton antiporter	NA	NA	NA	NA	NA
ARB79952.1|975286_976282_+	2-hydroxyacid dehydrogenase	NA	M1HUW8	Acanthocystis_turfacea_Chlorella_virus	42.4	2.1e-69
>prophage 90
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	981193	981403	1072312		Lactococcus_phage(100.0%)	1	NA	NA
ARB79959.1|981193_981403_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	68.3	5.7e-17
>prophage 91
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	990083	992018	1072312		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
ARB79967.1|990083_992018_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.0	4.7e-20
>prophage 92
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	1000374	1000587	1072312		Morganella_phage(100.0%)	1	NA	NA
ARB79975.1|1000374_1000587_-	cold-shock protein CspA	NA	A0A1W6JNX5	Morganella_phage	62.9	1.8e-18
>prophage 93
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	1016350	1016857	1072312		Synechococcus_phage(100.0%)	1	NA	NA
ARB79990.1|1016350_1016857_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	39.3	9.0e-16
>prophage 94
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	1027594	1030972	1072312		Hokovirus(50.0%)	2	NA	NA
ARB79997.1|1027594_1029649_+	sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	25.4	3.6e-10
ARB79998.1|1029763_1030972_-	Spindolin	NA	S5MR53	Choristoneura_rosaceana_nucleopolyhedrovirus	33.6	1.7e-28
>prophage 95
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	1038207	1047262	1072312		Synechococcus_phage(25.0%)	8	NA	NA
ARB80007.1|1038207_1039128_-	ribokinase	NA	E3SL45	Synechococcus_phage	38.6	3.4e-05
ARB80008.1|1039266_1040151_-	ribose ABC transporter substrate-binding protein RbsB	NA	C6ZCU4	Enterobacteria_phage	23.0	9.6e-05
ARB80009.1|1040205_1041207_-	ribose ABC transporter permease	NA	NA	NA	NA	NA
ARB80010.1|1041203_1042706_-	ribose import ATP-binding protein RbsA	NA	A0A2H4PQG7	Staphylococcus_phage	26.7	1.4e-16
ARB80067.1|1042732_1043152_-	D-ribose pyranase	NA	NA	NA	NA	NA
ARB80011.1|1043435_1043696_+	DUF3012 domain-containing protein	NA	NA	NA	NA	NA
ARB80012.2|1043843_1044212_-	hypothetical protein	NA	NA	NA	NA	NA
ARB80013.1|1044208_1047262_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	24.7	3.5e-30
>prophage 96
CP020407	Vibrio cholerae strain FDAARGOS_223 chromosome 2, complete sequence	1072312	1056055	1058665	1072312		Enterobacteria_phage(100.0%)	1	NA	NA
ARB80020.1|1056055_1058665_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.5	1.3e-89
