The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	20731	83480	2250607	integrase,transposase,tRNA	Lactococcus_phage(18.75%)	57	64110:64128	82569:82587
ARD90357.1|20731_22000_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
ARD90358.1|21980_22532_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	29.7	1.4e-09
ARD90359.1|22737_24828_+	Cell division protein FtsH	NA	G8DDJ2	Micromonas_pusilla_virus	49.2	1.6e-106
ARD90360.1|25895_27719_+	Phosphotransferase system mannitol-specific IIBC component	NA	NA	NA	NA	NA
ARD90361.1|27778_29641_+	transcriptional regulator mtl operon mtlR	NA	NA	NA	NA	NA
ARD90362.1|29712_30441_-|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	99.2	6.0e-130
ARD90363.1|30385_31696_-|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	99.7	3.1e-225
ARD90364.1|31918_32350_+	PTS system mannitol-specific IIA component	NA	NA	NA	NA	NA
ARD90365.1|32498_33665_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
ARD90366.1|34477_34720_+	membrane protein	NA	NA	NA	NA	NA
ARD90367.1|34813_36436_-	Sulfate transporter	NA	NA	NA	NA	NA
ARD90368.1|36645_37167_+	acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	42.1	1.0e-30
ARD90369.1|37628_38804_+	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
ARD90370.1|38901_39657_+	DNA repair protein RecO	NA	NA	NA	NA	NA
ARD90371.1|39808_41227_-	dihydrolipoamide dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.0	3.0e-40
ARD90372.1|41445_43032_-	pyruvate dehydrogenase complex E2 component	NA	NA	NA	NA	NA
ARD90373.1|43024_44005_-	pyruvate dehydrogenase E1 component beta subunit	NA	NA	NA	NA	NA
ARD90374.1|44007_45132_-	acetoin dehydrogenase complex E1 component alpha subunit	NA	NA	NA	NA	NA
ARD90375.1|45220_46222_-	lipoate-protein ligase	NA	NA	NA	NA	NA
ARD90376.1|46414_47269_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.4	7.8e-12
ARD90377.1|47347_48007_-	Metal-dependent phosphohydrolase HD superfamily	NA	A0A1S5XYU7	Kurlavirus	33.3	1.2e-15
ARD90378.1|48047_48374_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90379.1|48430_49321_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD90380.1|49473_50499_-|tRNA	tryptophanyl-tRNA synthetase II	tRNA	NA	NA	NA	NA
ARD90381.1|50997_51435_+	osmotically inducible protein C	NA	NA	NA	NA	NA
ARD90382.1|51596_52910_+	Amino acid permease	NA	NA	NA	NA	NA
ARD90383.1|52988_53984_-	glycerol-3-phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
ARD90384.1|54086_54899_-	Hydrolase HAD superfamily	NA	NA	NA	NA	NA
ARD90385.1|55426_57064_-	ATPase component of ABC transporter	NA	A0A2K9L3Z8	Tupanvirus	25.9	4.8e-50
ARD90386.1|57564_57819_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90387.1|57937_58762_-	Short chain dehydrogenase	NA	NA	NA	NA	NA
ARD90388.1|58921_59503_-	Transcriptional regulator	NA	NA	NA	NA	NA
ARD90389.1|59690_60173_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90390.1|60429_61710_-	O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase	NA	A0A2I2L687	Orpheovirus	26.5	2.5e-09
ARD90391.1|61962_62796_-	Short-chain dehydrogenase	NA	NA	NA	NA	NA
ARD90392.1|63144_64035_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
64110:64128	attL	AACTAGCAATTCGGGTATT	NA	NA	NA	NA
ARD90393.1|64940_66203_-|integrase	phage integrase	integrase	Q9AZK8	Lactococcus_phage	34.5	1.6e-53
ARD90394.1|66285_66546_-	phage protein	NA	NA	NA	NA	NA
ARD90395.1|66538_67141_-	Plasmid replication protein repB	NA	NA	NA	NA	NA
ARD90396.1|67291_67900_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90397.1|67896_68973_-	FtsK/SpoIIIE family	NA	NA	NA	NA	NA
ARD90398.1|68972_69293_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90399.1|69442_69874_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90400.1|70151_71462_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90401.1|71458_71809_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90402.1|71774_72395_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90403.1|72412_73582_-	Modification methylase ScrFIA	NA	Q6DMX0	Streptococcus_phage	70.2	1.1e-152
ARD90404.1|73746_74562_-	Type II restriction enzyme ScrFI	NA	NA	NA	NA	NA
ARD90405.1|74580_75663_-	Modification methylase ScrFIB	NA	A0A0E3DF50	Bacillus_phage	36.3	7.0e-50
ARD90406.1|75666_76134_-	orfX	NA	NA	NA	NA	NA
ARD90407.1|76331_76481_-	LSU ribosomal protein L33P	NA	NA	NA	NA	NA
ARD90408.1|76510_76684_-	LSU ribosomal protein L32P	NA	NA	NA	NA	NA
ARD90409.1|77045_78827_+	Lead cadmium zinc mercury transporting ATPase	NA	E4ZFI9	Streptococcus_phage	29.6	1.7e-64
ARD90410.1|79870_80656_-	chromosome partitioning protein parA	NA	NA	NA	NA	NA
ARD90411.1|80710_81970_-	Chromosome segregation helicase ATPase AAA family	NA	A0A127AWE7	Bacillus_phage	45.3	2.5e-91
ARD90412.1|82013_82502_-	Acetyltransferase GNAT family	NA	A0A1B2ICF0	Erwinia_phage	50.9	1.1e-05
ARD90413.1|82589_83480_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
82569:82587	attR	AATACCCGAATTGCTAGTT	NA	NA	NA	NA
>prophage 2
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	112233	168312	2250607	tRNA,protease,transposase	Bacillus_phage(37.5%)	54	NA	NA
ARD90443.1|112233_113073_+|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.6e-49
ARD90444.1|113941_115252_+|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	99.7	3.1e-225
ARD90445.1|115196_115925_+|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	99.2	6.0e-130
ARD90446.1|116071_117112_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90447.1|118057_119254_+	argininosuccinate synthase	NA	NA	NA	NA	NA
ARD90448.1|119282_120662_+	argininosuccinate lyase	NA	NA	NA	NA	NA
ARD90449.1|120678_121875_-	multidrug resistance efflux pump	NA	NA	NA	NA	NA
ARD90450.1|122067_122643_+	transcriptional regulator TetR family	NA	NA	NA	NA	NA
ARD90451.1|122799_123153_+	ribonuclease P	NA	NA	NA	NA	NA
ARD90452.1|123176_123959_+	preprotein translocase subunit	NA	NA	NA	NA	NA
ARD90453.1|124046_124961_+	RNA-binding protein R3H domain protein	NA	NA	NA	NA	NA
ARD90454.1|125092_125227_+	LSU ribosomal protein L34P	NA	NA	NA	NA	NA
ARD90455.1|125403_126315_+	aryl-alcohol dehydrogenase	NA	NA	NA	NA	NA
ARD90456.1|126384_126699_+	Transcriptional regulator xre family	NA	NA	NA	NA	NA
ARD90457.1|126761_127442_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90458.1|127736_128003_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90459.1|128002_128434_+	RNase H-like ribonuclease	NA	NA	NA	NA	NA
ARD90460.1|128534_128858_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90461.1|128887_129439_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90462.1|129528_130269_-	carbonyl reductase	NA	NA	NA	NA	NA
ARD90463.1|130288_130600_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90464.1|130609_131395_-	oxidoreductase dltE	NA	NA	NA	NA	NA
ARD90465.1|131513_132059_+	transcriptional regulator TetR family	NA	NA	NA	NA	NA
ARD90466.1|132124_134068_-	14-Alpha-glucan branching enzyme	NA	NA	NA	NA	NA
ARD90467.1|134187_134508_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90468.1|135330_135591_+	Transposase	NA	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
ARD90469.1|135602_136442_+|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.6e-49
ARD90470.1|136570_137110_+	HTH-type transcriptional regulator	NA	NA	NA	NA	NA
ARD90471.1|137565_142410_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90472.1|143767_144898_+	Cell surface protein C-terminal membrane anchored	NA	NA	NA	NA	NA
ARD90473.1|144970_145258_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90474.1|145309_146017_+	secreted protein	NA	NA	NA	NA	NA
ARD90475.1|146073_146964_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD90476.1|147112_149854_+	cell surface protein	NA	NA	NA	NA	NA
ARD90477.1|149829_150009_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90478.1|149965_150280_+	Transcriptional regulator xre family	NA	A0A1S5SC02	Streptococcus_phage	40.0	2.8e-07
ARD90479.1|150568_151717_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	42.9	1.9e-85
ARD90480.1|151916_152606_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90481.1|152660_153839_-	Transporter MF superfamily	NA	NA	NA	NA	NA
ARD90482.1|154020_154458_-	CoA-binding protein	NA	NA	NA	NA	NA
ARD90483.1|154594_155380_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
ARD90484.1|155548_155758_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90485.1|155769_156009_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90486.1|156206_157787_+	heme/copper-type cytochrome/quinol oxidase subunit 1	NA	NA	NA	NA	NA
ARD90487.1|157916_159131_+	L-aspartate aminotransferase apoenzyme	NA	NA	NA	NA	NA
ARD90488.1|159282_160071_+	transcriptional repressor CodY	NA	NA	NA	NA	NA
ARD90489.1|160348_160654_+|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	tRNA	NA	NA	NA	NA
ARD90490.1|160653_162114_+|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	tRNA	NA	NA	NA	NA
ARD90491.1|162138_163572_+|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	tRNA	NA	NA	NA	NA
ARD90492.1|163695_165195_+	amidase	NA	NA	NA	NA	NA
ARD90493.1|165259_166600_-	Na+ driven multidrug efflux pump MatE family	NA	NA	NA	NA	NA
ARD90494.1|166780_166978_-	cold-shock DNA-binding protein family	NA	Q9AZD3	Lactococcus_phage	83.1	3.5e-24
ARD90495.1|167096_167630_+	5-formyltetrahydrofolate cyclo-ligase family protein	NA	NA	NA	NA	NA
ARD90496.1|167619_168312_+|protease	Membrane-associated serine protease	protease	NA	NA	NA	NA
>prophage 3
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	410607	420738	2250607	tRNA	uncultured_virus(33.33%)	11	NA	NA
ARD90718.1|410607_410925_+	Thiol-disulfide isomerase and thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	31.9	9.0e-06
ARD90719.1|411030_411657_+|tRNA	phenylalanyl-tRNA synthetase beta chain	tRNA	NA	NA	NA	NA
ARD90720.1|411818_413159_+	NADH oxidase H2O-forming	NA	NA	NA	NA	NA
ARD90721.1|413249_413639_+	single-stranded DNA-binding protein,ssbA	NA	A0A218MNB4	uncultured_virus	48.6	1.3e-22
ARD90722.1|413757_414042_+	Co-chaperonin GroES (HSP10)	NA	A0A221S386	uncultured_virus	43.0	2.3e-13
ARD90723.1|414128_415757_+	Chaperonin GroEL (HSP60 family)	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
ARD90724.1|415808_416621_-	Metal-dependent hydrolase of the beta-lactamase superfamily I	NA	A0A0C5AJ83	Bacteriophage	38.1	1.5e-33
ARD90725.1|416810_418238_-	PAS/PAC sensor signal transduction histidine kinase	NA	W8CYF6	Bacillus_phage	32.9	3.9e-32
ARD90726.1|418230_418932_-	DNA-binding response regulator OmpR family (Rec-wHTH domains)	NA	W8CYM9	Bacillus_phage	39.7	1.2e-42
ARD90727.1|419109_419745_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	66.0	1.6e-73
ARD90728.1|419877_420738_+	DNA polymerase III delta prime subunit	NA	M1NSC1	Streptococcus_phage	44.8	3.1e-64
>prophage 4
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	521675	576441	2250607	tRNA,protease,transposase	Bacillus_phage(33.33%)	46	NA	NA
ARD90826.1|521675_522566_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD90827.1|522858_523236_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90828.1|523344_524490_+	Cysteine desulfurase / Selenocysteine lyase	NA	NA	NA	NA	NA
ARD90829.1|524639_525518_+	Gamma-glutamyl-diamino acid-endopeptidase extracellular cell-wall-bound	NA	NA	NA	NA	NA
ARD90830.1|525574_527224_-	Oligopeptide-binding protein	NA	NA	NA	NA	NA
ARD90831.1|527407_528340_-	cysteine synthase	NA	A0A1X9I5K7	Streptococcus_phage	71.1	4.0e-118
ARD90832.1|528558_529644_+	N-acetylglucosaminidase	NA	A0A223LD43	Bacillus_phage	34.1	2.1e-09
ARD90833.1|529679_530312_-	Metallo-beta-lactamase family protein	NA	A0A1X9I5D3	Streptococcus_phage	45.3	1.7e-48
ARD90834.1|530312_532394_-	Multimodular transpeptidase-transglycosylase PBP 1A	NA	NA	NA	NA	NA
ARD90835.1|532380_533022_-	Recombination protein RecU	NA	NA	NA	NA	NA
ARD90836.1|533102_533627_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90837.1|533771_534173_+	Arsenate reductase related protein glutaredoxin family	NA	NA	NA	NA	NA
ARD90838.1|534393_534675_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90839.1|534640_535420_+	Myo-inositol-1(or 4)-monophosphatase	NA	NA	NA	NA	NA
ARD90840.1|535514_536795_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
ARD90841.1|536794_536986_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90842.1|537064_537622_+|transposase	IS3/IS911 transposase N-terminal protein	transposase	NA	NA	NA	NA
ARD90843.1|537618_538512_+|transposase	transposase for insertion sequence IS904H	transposase	A0A1B1P773	Bacillus_phage	42.8	2.4e-51
ARD90844.1|538651_539935_+	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	NA	NA	NA	NA	NA
ARD90845.1|546794_548708_+	DNA primase	NA	A0A1S5REW9	Helicobacter_phage	33.5	1.7e-43
ARD90846.1|548784_550128_+	RNA polymerase sigma 70 subunit RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.6	7.2e-36
ARD90847.1|551135_552515_+	glycerol-3-phosphatase transporter	NA	NA	NA	NA	NA
ARD90848.1|553548_554814_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90849.1|555042_555387_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90850.1|555432_557679_+|protease	ATP-dependent Clp protease ATP-binding subunit clpE	protease	K4FB40	Cronobacter_phage	39.7	2.1e-125
ARD90851.1|557804_558275_-	Transcriptional regulator Rrf2 family	NA	NA	NA	NA	NA
ARD90852.1|558617_559514_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
ARD90853.1|559737_560373_-|tRNA	N-formylmethionyl-tRNA deformylase	tRNA	Q6VSW0	Vibrio_phage	36.4	3.8e-11
ARD90854.1|560527_560932_+	Bis(5-nucleosyl)-tetraphosphatase (asymmetrical)	NA	NA	NA	NA	NA
ARD90855.1|560993_563072_+	Excinuclease ABC subunit B	NA	NA	NA	NA	NA
ARD90856.1|563782_564601_-	Transposase	NA	A0A1B1P773	Bacillus_phage	43.3	1.8e-53
ARD90857.1|564597_565155_-|transposase	IS3/IS911 transposase N-terminal protein	transposase	NA	NA	NA	NA
ARD90858.1|566747_567203_-	3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase	NA	NA	NA	NA	NA
ARD90859.1|567478_568231_+	Enoyl-[acyl-carrier protein] reductase (NADH)	NA	NA	NA	NA	NA
ARD90860.1|568416_569379_-	OxaA-like protein precursor	NA	NA	NA	NA	NA
ARD90861.1|569553_570312_-	alpha-phosphoglucomutase	NA	A0A2P1EM96	Moumouvirus	25.9	6.1e-08
ARD90862.1|570406_570997_-	membrane protein	NA	NA	NA	NA	NA
ARD90863.1|571013_571550_-	phosphopantothenoylcysteine decarboxylase	NA	Q9J5A8	Fowlpox_virus	34.9	6.8e-22
ARD90864.1|571542_572238_-	Phosphopantothenoylcysteine synthetase/decarboxylase	NA	Q9HH70	Methanothermobacter_phage	31.7	1.7e-17
ARD90865.1|572347_572569_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
ARD90866.1|572754_574167_+	Cation transport ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	25.6	6.0e-25
ARD90867.1|574200_574611_+	Cation transport ATPase	NA	NA	NA	NA	NA
ARD90868.1|574607_574865_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90869.1|575114_575309_+	Acetyltransferase GNAT family	NA	NA	NA	NA	NA
ARD90870.1|575329_575590_+	Transposase	NA	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
ARD90871.1|575601_576441_+|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.6e-49
>prophage 5
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	602210	665092	2250607	tRNA,protease,transposase	Bacillus_phage(22.22%)	54	NA	NA
ARD90903.1|602210_603101_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD90904.1|603153_603876_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90905.1|603907_604183_+	membrane protein	NA	NA	NA	NA	NA
ARD90906.1|604594_605527_+	Hpr(Ser) kinase	NA	NA	NA	NA	NA
ARD90907.1|605588_606374_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
ARD90908.1|606540_606960_+	Methyl-accepting chemotaxis-like domain containing protein	NA	NA	NA	NA	NA
ARD90909.1|606989_607550_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90910.1|607683_609102_+	6-phosphogluconate dehydrogenase	NA	E3SJC4	Synechococcus_phage	33.0	8.4e-35
ARD90911.1|609283_611305_+	Kup system potassium uptake protein	NA	A7K9V6	Acanthocystis_turfacea_chlorella_virus	33.9	4.2e-64
ARD90912.1|611519_613535_+	Kup system potassium uptake protein	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	31.6	3.8e-57
ARD90913.1|613587_613758_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90914.1|613952_614618_+	hypothetical protein	NA	M1Q1P6	Streptococcus_phage	29.8	2.3e-19
ARD90915.1|614749_615634_+|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
ARD90916.1|615779_616448_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90917.1|616612_617515_+|protease	Membrane protease subunit stomatin/prohibitin family	protease	A0A1V0SL90	Klosneuvirus	35.2	1.8e-35
ARD90918.1|617763_618429_-	Glycoside hydrolase family 25	NA	A0A1P8BMN5	Lactococcus_phage	56.9	3.2e-13
ARD90919.1|618887_619235_-	HTH-type transcriptional regulator	NA	A0A182BQC8	Lactococcus_phage	74.6	2.0e-43
ARD90920.1|619999_620923_+	ribonuclease Z	NA	NA	NA	NA	NA
ARD90921.1|620915_621617_+	Short-chain dehydrogenase	NA	NA	NA	NA	NA
ARD90922.1|621789_624018_+	single strand DNA-specific exonuclease	NA	A7KV88	Bacillus_phage	30.9	6.7e-79
ARD90923.1|624141_624654_+	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.0	5.3e-32
ARD90924.1|624869_625433_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
ARD90925.1|625571_627209_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
ARD90926.1|627269_627740_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
ARD90927.1|627934_628306_+	Transposase	NA	NA	NA	NA	NA
ARD90928.1|628302_629121_+	Transposase	NA	A0A1B1P773	Bacillus_phage	43.0	3.0e-53
ARD90929.1|629175_630015_-	Transposase	NA	U5P429	Shigella_phage	41.0	1.6e-46
ARD90930.1|630032_630323_-	Transposase	NA	NA	NA	NA	NA
ARD90931.1|630570_631026_+	Transcriptional repressor of class III stress protein CtsR	NA	NA	NA	NA	NA
ARD90932.1|631015_633466_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	34.0	2.2e-123
ARD90933.1|633600_634158_+	sigma 54 modulation protein	NA	NA	NA	NA	NA
ARD90934.1|634345_635647_+	enolase	NA	A0A1X9I5Z8	Streptococcus_phage	87.6	4.0e-217
ARD90935.1|635750_636422_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	4.2e-29
ARD90936.1|636423_637497_-	ABC transporter permease	NA	NA	NA	NA	NA
ARD90937.1|637508_638078_-	transcriptional regulator	NA	NA	NA	NA	NA
ARD90938.1|638264_639788_-	long-chain acyl-CoA synthetase	NA	NA	NA	NA	NA
ARD90939.1|639981_640899_+	Mg2 and Co2 transporter CorA family	NA	NA	NA	NA	NA
ARD90940.1|641158_643522_+	formate acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	31.8	3.6e-107
ARD90941.1|643650_644310_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
ARD90942.1|644402_645530_+	multidrug resistance efflux pump	NA	NA	NA	NA	NA
ARD90943.1|645526_645673_+	LSU ribosomal protein L33P	NA	NA	NA	NA	NA
ARD90944.1|646050_647313_+	cell division-specific peptidoglycan biosynthesis regulator FtsW	NA	NA	NA	NA	NA
ARD90945.1|647417_650831_+	pyruvate carboxylase	NA	NA	NA	NA	NA
ARD90946.1|652278_654825_+	aconitate hydratase	NA	NA	NA	NA	NA
ARD90947.1|654844_656083_+	Isocitrate dehydrogenase [NADP]	NA	NA	NA	NA	NA
ARD90948.1|656122_656722_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	52.6	7.1e-52
ARD90949.1|656916_657447_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90950.1|657616_658015_+	Arsenate reductase related protein glutaredoxin family	NA	NA	NA	NA	NA
ARD90951.1|658165_658300_-	secreted protein	NA	NA	NA	NA	NA
ARD90952.1|658396_659560_-	ABC transporter, permease protein	NA	NA	NA	NA	NA
ARD90953.1|662625_662859_+|transposase	IS981 transposase A	transposase	A0A1P8CWP5	Bacillus_phage	35.1	2.1e-07
ARD90954.1|662896_663736_+	Transposase	NA	A0A1P8CWQ3	Bacillus_phage	41.4	9.3e-50
ARD90955.1|663837_664095_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90956.1|664201_665092_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
>prophage 6
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	857598	970889	2250607	integrase,transposase	Bacillus_phage(24.0%)	107	909987:910004	959966:959983
ARD91127.1|857598_858489_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91128.1|859075_859336_+	Transposase	NA	A0A1P8CWP5	Bacillus_phage	40.0	6.5e-10
ARD91129.1|859586_860177_+|transposase	transposase for insertion sequence element IS981O	transposase	Q6J1X2	Lactobacillus_phage	42.6	1.2e-35
ARD91130.1|860228_861044_-	glycosyltransferase	NA	NA	NA	NA	NA
ARD91131.1|861358_862777_+	dipeptidase PepV	NA	NA	NA	NA	NA
ARD91132.1|862905_863265_+	Phosphopantetheinyl transferase (holo-ACP synthase)	NA	NA	NA	NA	NA
ARD91133.1|863308_864412_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	28.1	6.3e-30
ARD91134.1|864572_865001_+	Arsenate reductase related protein glutaredoxin family	NA	NA	NA	NA	NA
ARD91135.1|865139_866447_+	glutathione reductase	NA	NA	NA	NA	NA
ARD91136.1|866575_867493_+	ABC-type proline/glycine betaine transport system ATPase component	NA	G3M9Y6	Bacillus_virus	30.1	9.0e-22
ARD91137.1|867489_868992_+	Glycine betaine ABC transporter permease and substrate-binding protein	NA	NA	NA	NA	NA
ARD91138.1|869253_871788_+	Hypothetical protein	NA	NA	NA	NA	NA
ARD91139.1|871774_872314_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91140.1|872323_872701_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91141.1|872716_873295_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91142.1|873276_874167_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91143.1|876556_877444_+	5,10-methylenetetrahydrofolate dehydrogenase (NADP+)	NA	A0A249XZQ2	Enterococcus_phage	39.0	2.1e-39
ARD91144.1|877614_878868_+	Exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	32.3	1.2e-45
ARD91145.1|878870_879110_+	Exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
ARD91146.1|879336_880227_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91147.1|880285_881431_+	Glycerate kinase	NA	W6LM47	Streptococcus_phage	38.8	4.5e-47
ARD91148.1|881655_882513_+	Dimethylallyltransferase/geranyltranstransferase	NA	NA	NA	NA	NA
ARD91149.1|882513_883014_+	acetyltransferase	NA	NA	NA	NA	NA
ARD91150.1|883089_883896_+	rRNA methylase	NA	NA	NA	NA	NA
ARD91151.1|883892_884339_+	transcriptional regulator ArgR family	NA	NA	NA	NA	NA
ARD91152.1|884518_886186_+	DNA repair protein recN	NA	NA	NA	NA	NA
ARD91153.1|886885_887452_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91154.1|887546_888068_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91155.1|889246_890200_+	S-adenosyl-methyltransferase MraW	NA	NA	NA	NA	NA
ARD91156.1|890355_890736_+	Cell division protein FtsL DivIC superfamily	NA	NA	NA	NA	NA
ARD91157.1|890732_893030_+	Cell division specific DD-transpeptidase FtsI	NA	NA	NA	NA	NA
ARD91158.1|893104_894094_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
ARD91159.1|894292_894577_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91160.1|896352_897015_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.4e-21
ARD91161.1|897374_898262_+	malolactic fermentation system transcription activator	NA	NA	NA	NA	NA
ARD91162.1|898520_899411_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91163.1|899497_900172_+	RelA / SpoT (ppGpp synthetase/hydrolase) catalytic domain	NA	NA	NA	NA	NA
ARD91164.1|900331_900676_+	LSU ribosomal protein L19P	NA	NA	NA	NA	NA
ARD91165.1|901605_902067_-	Acetyltransferase GNAT family	NA	NA	NA	NA	NA
ARD91166.1|902321_902621_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91167.1|902824_904153_+	Glycosyltransferase family 2 cellulose synthase (CESA) superfamily	NA	NA	NA	NA	NA
ARD91168.1|904383_904941_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91169.1|905003_905249_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91170.1|905521_906247_+	Nicotinamide mononucleotide transporter	NA	A0A2P0ZKW0	Lactobacillus_phage	28.7	1.1e-14
ARD91171.1|906389_906545_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91172.1|906799_907225_+	universal stress protein A	NA	NA	NA	NA	NA
ARD91173.1|907392_907755_+	HU-like DNA-binding protein	NA	NA	NA	NA	NA
ARD91174.1|907816_908350_-	transcriptional regulator TetR family	NA	NA	NA	NA	NA
ARD91175.1|909021_909912_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
909987:910004	attL	AACTAGCAATTCGGGTAT	NA	NA	NA	NA
ARD91176.1|912106_912439_+	metal-sulfur cluster biosynthetic enzyme	NA	NA	NA	NA	NA
ARD91177.1|912574_913549_+|integrase	integrase/recombinase	integrase	A0A142F1N9	Bacillus_phage	28.3	1.9e-30
ARD91178.1|913736_914357_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91179.1|914433_914694_+	Transposase	NA	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
ARD91180.1|914705_915545_+|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	6.0e-49
ARD91181.1|915892_916189_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91182.1|916523_917153_+	secreted membrane protein	NA	NA	NA	NA	NA
ARD91183.1|917149_918148_+	Two-component sensor protein kinase	NA	NA	NA	NA	NA
ARD91184.1|918175_918805_+	DNA-binding response regulator (Rec-wHTH domains)	NA	NA	NA	NA	NA
ARD91185.1|918875_919682_+	Hydrolase HAD superfamily Cof subfamily	NA	NA	NA	NA	NA
ARD91186.1|919781_920372_+	peptidyl-prolyl cis-trans isomerase	NA	A0A1V0S9I2	Catovirus	45.5	3.2e-28
ARD91187.1|920373_920805_+	RNA binding protein (contains ribosomal protein S1 domain)	NA	NA	NA	NA	NA
ARD91188.1|920801_921407_+	hypothetical protein	NA	M1Q152	Streptococcus_phage	36.9	1.0e-29
ARD91189.1|921618_922863_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
ARD91190.1|924194_924956_+	Acetoin dehydrogenase	NA	NA	NA	NA	NA
ARD91191.1|925228_925390_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91192.1|925500_927051_+	ABC transporter ATP-binding protein	NA	Q6DMX7	Streptococcus_phage	23.6	6.0e-26
ARD91193.1|927465_929088_+	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
ARD91194.1|929102_930380_+	Na+/malate symporter	NA	NA	NA	NA	NA
ARD91195.1|930564_931464_+	permease of the drug/metabolite transporter (DMT) superfamily	NA	NA	NA	NA	NA
ARD91196.1|931586_932351_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	4.5e-27
ARD91197.1|932331_933912_+	ABC transporter permease protein	NA	NA	NA	NA	NA
ARD91198.1|934997_935645_+	P-Ser-HPr phosphatase	NA	NA	NA	NA	NA
ARD91199.1|935798_937754_+	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	44.7	2.9e-142
ARD91200.1|937850_938036_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91201.1|938915_939425_+	SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	55.4	2.6e-47
ARD91202.1|939597_940239_+	secreted protein	NA	NA	NA	NA	NA
ARD91203.1|940396_940861_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
ARD91204.1|940919_942398_+	Multidrug resistance protein B MF superfamily	NA	NA	NA	NA	NA
ARD91205.1|942397_943117_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91206.1|943430_944285_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91207.1|944448_945261_+	Exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
ARD91208.1|945293_946133_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.8	2.7e-49
ARD91209.1|946144_946405_-|transposase	IS981 transposase A	transposase	A0A1P8CWP5	Bacillus_phage	40.0	6.5e-10
ARD91210.1|946507_949519_+	glycosyltransferase	NA	NA	NA	NA	NA
ARD91211.1|949619_950510_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91212.1|950534_950759_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91213.1|950748_951864_+	CDP-glycerol/poly(glycerophosphate) glycerophosphotransferase	NA	NA	NA	NA	NA
ARD91214.1|951963_952794_+	Transcriptional regulator	NA	NA	NA	NA	NA
ARD91215.1|952980_954216_+	Phosphopentomutase	NA	NA	NA	NA	NA
ARD91216.1|954306_954543_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91217.1|954613_955318_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
ARD91218.1|955753_956041_-	hypothetical protein	NA	A0A1B1IMF9	Lactococcus_phage	87.9	2.5e-07
ARD91219.1|956573_957020_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91220.1|957103_957430_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91221.1|957590_959258_+	Formate-tetrahydrofolate ligase	NA	NA	NA	NA	NA
ARD91222.1|959366_959960_+	Cell wall-associated hydrolase	NA	A0A1V0DZX6	Clostridioides_phage	43.5	2.4e-15
ARD91223.1|959985_960876_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
959966:959983	attR	ATACCCGAATTGCTAGTT	NA	NA	NA	NA
ARD91224.1|961111_961960_+	amino acid ABC transporter substrate binding protein	NA	NA	NA	NA	NA
ARD91225.1|962228_963116_+	amino acid ABC transporter membrane protein PAAT family	NA	NA	NA	NA	NA
ARD91226.1|963127_963880_+	amino acid ABC transporter ATP-binding protein PAAT family	NA	G9BWD6	Planktothrix_phage	39.2	1.8e-28
ARD91227.1|963881_964109_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91228.1|964306_965233_+	Thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.1	2.0e-85
ARD91229.1|965373_965622_+	Preprotein translocase subunit SecG	NA	NA	NA	NA	NA
ARD91230.1|965863_968317_+	Exoribonuclease R VacB family	NA	Q0GXV6	Lactococcus_phage	44.2	1.3e-104
ARD91231.1|968335_968923_+	Isochorismatase family protein	NA	NA	NA	NA	NA
ARD91232.1|969000_970017_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
ARD91233.1|969998_970889_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
>prophage 7
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	1011648	1035346	2250607	transposase	Bacillus_phage(18.75%)	23	NA	NA
ARD91274.1|1011648_1012341_+	cell division ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.3	4.2e-32
ARD91275.1|1012333_1013269_+	cell division protein ftsX-like protein	NA	NA	NA	NA	NA
ARD91276.1|1013378_1014356_-	ribonucleoside-diphosphate reductase class Ib beta subunit	NA	A0A096XT60	Enterococcus_phage	65.7	6.0e-117
ARD91277.1|1014739_1016908_-	ribonucleoside-diphosphate reductase class Ib alpha subunit	NA	A8E2R1	Enterococcus_phage	60.7	3.3e-256
ARD91278.1|1017044_1017467_-	ribonucleotide reductase stimulatory protein	NA	A0A142F1R4	Bacillus_phage	36.4	1.7e-12
ARD91279.1|1017468_1017687_-	ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit	NA	C3U2K9	Lactococcus_phage	47.6	5.8e-12
ARD91280.1|1017860_1018502_-	acyl-phosphate glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
ARD91281.1|1018780_1020715_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.9	4.1e-125
ARD91282.1|1020821_1021358_+	isochorismatase	NA	NA	NA	NA	NA
ARD91283.1|1021350_1022184_+	DNA polymerase III epsilon chain	NA	A0A0K2SUJ2	Clostridium_phage	38.7	1.5e-20
ARD91284.1|1022180_1022561_+	Acetyltransferase GNAT family	NA	NA	NA	NA	NA
ARD91285.1|1022781_1025256_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.9	1.0e-96
ARD91286.1|1026073_1026754_+	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	84.5	8.5e-110
ARD91287.1|1027494_1028583_+	riboflavin biosynthesis protein RibD	NA	A0A1V0SE20	Indivirus	37.8	8.4e-51
ARD91288.1|1028582_1029230_+	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	44.7	5.5e-42
ARD91289.1|1029241_1030438_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	50.3	7.4e-109
ARD91290.1|1030464_1030929_+	67-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	55.3	1.4e-39
ARD91291.1|1031110_1031371_+	Transposase	NA	A0A1P8CWP5	Bacillus_phage	36.5	1.1e-09
ARD91292.1|1031382_1032222_+|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.1	6.0e-49
ARD91293.1|1032254_1033157_-	transcription regulator	NA	NA	NA	NA	NA
ARD91294.1|1033255_1033636_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91295.1|1033925_1034378_+	signal peptidase II Aspartic peptidase MEROPS family A08	NA	NA	NA	NA	NA
ARD91296.1|1034440_1035346_+	ribosomal large subunit pseudouridine synthase D	NA	A0A2H4UV25	Bodo_saltans_virus	27.8	3.5e-10
>prophage 8
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	1150476	1193875	2250607	tRNA,protease,transposase	Bacillus_phage(25.0%)	41	NA	NA
ARD91405.1|1150476_1151712_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.6	2.4e-134
ARD91406.1|1151708_1152296_+	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
ARD91407.1|1152349_1152700_+	Dihydroneopterin aldolase	NA	NA	NA	NA	NA
ARD91408.1|1152779_1153829_+	GTP cyclohydrolase I	NA	A0A088F7Y4	Vibrio_phage	45.1	8.7e-37
ARD91409.1|1153825_1154899_+	dihydropteroate synthase	NA	NA	NA	NA	NA
ARD91410.1|1154901_1155402_+	Dihydroneopterin triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
ARD91411.1|1155417_1156701_+	Folylpolyglutamate synthase / Dihydrofolate synthase	NA	NA	NA	NA	NA
ARD91412.1|1156829_1157468_+	Deoxynucleoside kinase	NA	Q5ULP7	Lactobacillus_virus	47.9	5.4e-50
ARD91413.1|1157647_1158934_+	homoserine dehydrogenase	NA	NA	NA	NA	NA
ARD91414.1|1158938_1159829_+	homoserine kinase	NA	NA	NA	NA	NA
ARD91415.1|1160082_1160682_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91416.1|1160724_1161624_+	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA	NA
ARD91417.1|1162083_1163364_+	spermidine/putrescine ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	38.4	6.0e-32
ARD91418.1|1163360_1164149_+	spermidine/putrescine ABC transporter permease protein	NA	NA	NA	NA	NA
ARD91419.1|1164150_1164951_+	spermidine/putrescine ABC transporter permease protein	NA	NA	NA	NA	NA
ARD91420.1|1164998_1166066_+	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARD91421.1|1166663_1167275_-	transcriptional regulator AraC family	NA	NA	NA	NA	NA
ARD91422.1|1167274_1168468_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91423.1|1168764_1169946_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91424.1|1169978_1171640_+	Beta-14-xylosidase	NA	NA	NA	NA	NA
ARD91425.1|1172241_1172475_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91426.1|1172581_1172926_+	Transcriptional regulator Xre family	NA	NA	NA	NA	NA
ARD91427.1|1173154_1173913_+	surface protein	NA	NA	NA	NA	NA
ARD91428.1|1174002_1174893_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91429.1|1175105_1175420_+	transcriptional regulator	NA	NA	NA	NA	NA
ARD91430.1|1176177_1176594_+	Arsenate reductase family protein	NA	NA	NA	NA	NA
ARD91431.1|1176958_1177369_-	transcriptional regulator	NA	NA	NA	NA	NA
ARD91432.1|1177540_1178398_+	Aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	30.4	2.4e-29
ARD91433.1|1178435_1179326_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91434.1|1179743_1180583_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.1	6.0e-49
ARD91435.1|1180594_1180855_-|transposase	IS981 transposase A	transposase	A0A1P8CWP5	Bacillus_phage	36.5	2.5e-09
ARD91436.1|1181198_1181903_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
ARD91437.1|1182924_1184295_+|tRNA	tRNA (uracil-5-)-methyltransferase related enzyme	tRNA	E4ZFI6	Streptococcus_phage	56.0	3.8e-141
ARD91438.1|1184339_1185947_+	NAD(FAD)-utilizing dehydrogenase	NA	NA	NA	NA	NA
ARD91439.1|1185948_1186569_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
ARD91440.1|1186634_1187807_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91441.1|1187834_1189091_+	TPR repeat-containing protein Tetratricopeptide repeat family	NA	NA	NA	NA	NA
ARD91442.1|1189245_1190910_+	acetolactate synthase	NA	NA	NA	NA	NA
ARD91443.1|1191016_1192162_-	arabinose efflux permease	NA	NA	NA	NA	NA
ARD91444.1|1192269_1192668_+	transcriptional regulator	NA	NA	NA	NA	NA
ARD91445.1|1192984_1193875_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
>prophage 9
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	1326217	1390295	2250607	transposase,lysis	Bacillus_phage(44.44%)	57	NA	NA
ARD91548.1|1326217_1327108_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91549.1|1327327_1327513_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91550.1|1327512_1330125_-	putative extracellular LPXTG-anchored protein	NA	R9R2F6	Lactococcus_phage	45.7	3.4e-05
ARD91551.1|1330467_1330911_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91552.1|1331215_1332838_+	Fibronectin-binding protein	NA	Q84500	Paramecium_bursaria_Chlorella_virus	32.1	5.5e-06
ARD91553.1|1332879_1333695_+	23S rRNA m(1)G 745 methyltransferase	NA	NA	NA	NA	NA
ARD91554.1|1333876_1335397_+	purine/cytidine ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.1	2.4e-19
ARD91555.1|1335389_1336484_+	purine/cytidine ABC transporter permease protein	NA	NA	NA	NA	NA
ARD91556.1|1336480_1337434_+	nucleoside ABC transporter membrane protein	NA	NA	NA	NA	NA
ARD91557.1|1337550_1338528_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
ARD91558.1|1338645_1340154_-	pyruvate kinase	NA	NA	NA	NA	NA
ARD91559.1|1340241_1341264_-	6-phosphofructokinase	NA	NA	NA	NA	NA
ARD91560.1|1341651_1342800_-	N-acetylglucosamine 6-phosphate deacetylase	NA	NA	NA	NA	NA
ARD91561.1|1342970_1344149_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.8	1.5e-37
ARD91562.1|1344290_1344917_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
ARD91563.1|1345107_1346136_+	Glycerol-3-phosphate dehydrogenase [NAD(P) ]	NA	NA	NA	NA	NA
ARD91564.1|1346177_1347119_+	UDP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	52.2	2.8e-79
ARD91565.1|1347189_1347597_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91566.1|1347593_1348124_+	heptaprenyl diphosphate synthase component I	NA	NA	NA	NA	NA
ARD91567.1|1348114_1349074_+	heptaprenyl diphosphate synthase component II	NA	NA	NA	NA	NA
ARD91568.1|1349070_1349787_+	16S rRNA methyltransferase GidB	NA	NA	NA	NA	NA
ARD91569.1|1349795_1350254_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91570.1|1350255_1350969_-	orotidine-5-phosphate decarboxylase	NA	NA	NA	NA	NA
ARD91571.1|1351098_1352034_-	dihydroorotate dehydrogenase 1B	NA	NA	NA	NA	NA
ARD91572.1|1352264_1353053_-	Dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA	NA
ARD91573.1|1353302_1354667_-	Multidrug resistance protein B MF superfamily	NA	NA	NA	NA	NA
ARD91574.1|1354864_1355581_-	trehalose operon transcriptional repressor	NA	NA	NA	NA	NA
ARD91575.1|1355651_1357079_-	Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase	NA	NA	NA	NA	NA
ARD91576.1|1357088_1357829_-	3-ketoacyl-(acyl-carrier-protein) reductase	NA	NA	NA	NA	NA
ARD91577.1|1357829_1358375_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91578.1|1358371_1359208_-	sugar transport system permease protein	NA	NA	NA	NA	NA
ARD91579.1|1359207_1360164_-	carbohydrate ABC transporter membrane protein 1 CUT1 family	NA	NA	NA	NA	NA
ARD91580.1|1360198_1361518_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARD91581.1|1363746_1364976_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91582.1|1365189_1366341_+	ATP/GTP binding protein	NA	NA	NA	NA	NA
ARD91583.1|1366337_1367123_+	Beta-propeller domains of methanol dehydrogenase type	NA	NA	NA	NA	NA
ARD91584.1|1367157_1367691_-	ribosomal large subunit pseudouridine synthase E	NA	NA	NA	NA	NA
ARD91585.1|1367990_1369508_+	glycerol kinase	NA	NA	NA	NA	NA
ARD91586.1|1369560_1371138_+	Alpha-glycerophosphate oxidase	NA	NA	NA	NA	NA
ARD91587.1|1371156_1371750_+	glycerol uptake facilitator	NA	NA	NA	NA	NA
ARD91588.1|1371669_1371939_-	cell surface protein	NA	NA	NA	NA	NA
ARD91589.1|1372017_1372830_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91590.1|1372810_1373146_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91591.1|1373461_1374301_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.2e-49
ARD91592.1|1374312_1374573_-|transposase	IS981 transposase A	transposase	A0A1P8CWP5	Bacillus_phage	37.6	1.9e-09
ARD91593.1|1374593_1375253_-	secreted protein	NA	NA	NA	NA	NA
ARD91594.1|1375420_1377331_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91595.1|1377406_1377988_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91596.1|1378186_1381381_-	Carbamoyl-phosphate synthase large chain	NA	NA	NA	NA	NA
ARD91597.1|1381730_1382204_-	Glutathione peroxidase	NA	NA	NA	NA	NA
ARD91598.1|1383102_1385736_-	Calcium-transporting ATPase	NA	M1HX51	Paramecium_bursaria_Chlorella_virus	30.8	4.5e-90
ARD91599.1|1385993_1386719_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91600.1|1386938_1387370_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91601.1|1387426_1388266_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	1.6e-49
ARD91602.1|1388277_1388430_-	Transposase	NA	NA	NA	NA	NA
ARD91603.1|1388686_1389241_+	hypothetical protein	NA	NA	NA	NA	NA
ARD91604.1|1389404_1390295_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
>prophage 10
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	1408888	1471080	2250607	holin,transposase,protease	Acinetobacter_phage(17.65%)	55	NA	NA
ARD91626.1|1408888_1410112_-|holin	Glycine betaine/carnitine/choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	36.9	1.7e-28
ARD91627.1|1410323_1410944_-	transcriptional regulator GntR family	NA	NA	NA	NA	NA
ARD91628.1|1411109_1412612_-	Beta-glucosidase/ 6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
ARD91629.1|1412633_1413314_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	84.5	8.5e-110
ARD91630.1|1413350_1413875_-	transcriptional antiterminator BglG family	NA	NA	NA	NA	NA
ARD91631.1|1414050_1414812_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
ARD91632.1|1414811_1416017_-	Tryptophan synthase beta chain	NA	NA	NA	NA	NA
ARD91633.1|1416115_1416634_-	Acetyltransferase including N-acetylase of ribosomal protein	NA	NA	NA	NA	NA
ARD91634.1|1416623_1417682_-	N-(5-phosphoribosyl)anthranilate isomerase	NA	NA	NA	NA	NA
ARD91635.1|1417671_1418466_-	indole-3-glycerol phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	35.5	1.7e-29
ARD91636.1|1419129_1419483_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91637.1|1419437_1419932_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91638.1|1420129_1421137_-	Anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	35.9	6.6e-50
ARD91639.1|1421141_1421723_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	45.1	5.5e-33
ARD91640.1|1421774_1423145_-	anthranilate synthase component I	NA	NA	NA	NA	NA
ARD91641.1|1423598_1423958_-	membrane protein	NA	NA	NA	NA	NA
ARD91642.1|1423972_1424611_-	Nitroreductase/Transcriptional regulator MarR family	NA	NA	NA	NA	NA
ARD91643.1|1424622_1425042_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
ARD91644.1|1425151_1425895_-	Methylase for ubiquinone/menaquinone biosynthesis	NA	NA	NA	NA	NA
ARD91645.1|1425970_1426651_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91646.1|1426650_1427340_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91647.1|1427466_1427853_+	ferric uptake regulation protein	NA	NA	NA	NA	NA
ARD91648.1|1428033_1428924_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91649.1|1429020_1429374_-	transcriptional regulator	NA	NA	NA	NA	NA
ARD91650.1|1429531_1430263_+	Short-chain alcohol dehydrogenase	NA	A0A2P0VP75	Tetraselmis_virus	28.8	5.5e-06
ARD91651.1|1430372_1432172_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
ARD91652.1|1432432_1432852_-	transcriptional regulator MarR family	NA	NA	NA	NA	NA
ARD91653.1|1433027_1433933_+	cationic transporter	NA	NA	NA	NA	NA
ARD91654.1|1434031_1435411_+	Na+-driven multidrug efflux pump MatE family	NA	NA	NA	NA	NA
ARD91655.1|1435454_1437482_-	hypothetical protein	NA	NA	NA	NA	NA
ARD91656.1|1437890_1438589_-	secreted protein	NA	NA	NA	NA	NA
ARD91657.1|1438708_1440343_-	Oligosaccharide ABC transporter oligosaccharide-binding protein	NA	NA	NA	NA	NA
ARD91658.1|1440414_1441278_-	Oligosaccharider ABC transporter permease protein	NA	NA	NA	NA	NA
ARD91659.1|1441288_1442179_-	Oligosaccharide ABC transporter permease protein	NA	NA	NA	NA	NA
ARD91660.1|1442511_1444053_-	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	30.3	7.0e-19
ARD91661.1|1444262_1445138_-	fructokinase	NA	NA	NA	NA	NA
ARD91662.1|1445268_1446159_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD91663.1|1447173_1448499_-	Xylose isomerase	NA	NA	NA	NA	NA
ARD91664.1|1448609_1449542_+	xylose operon regulator	NA	NA	NA	NA	NA
ARD91665.1|1449697_1450804_-	phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
ARD91666.1|1450859_1451345_-	phosphoribosylaminoimidazole carboxylase catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	43.0	7.3e-23
ARD91667.1|1451341_1452070_-	hydrolase	NA	NA	NA	NA	NA
ARD91668.1|1452141_1453383_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
ARD91669.1|1453776_1454403_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
ARD91670.1|1456758_1458315_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.2	3.6e-71
ARD91671.1|1458491_1459034_-	Hypoxanthine-guanine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	30.6	6.1e-10
ARD91672.1|1460229_1460760_+	Transcriptional regulator TetR family	NA	NA	NA	NA	NA
ARD91673.1|1460811_1461366_-	ABC-type multidrug transport system ATPase and permease component	NA	F2Y1V6	Organic_Lake_phycodnavirus	34.3	1.5e-11
ARD91674.1|1461328_1462402_-	Multidrug resistance ABC transporter ATP-binding and permease protein	NA	NA	NA	NA	NA
ARD91675.1|1462592_1463141_-	formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	32.0	1.5e-19
ARD91676.1|1463169_1464186_-	Phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.5	2.4e-60
ARD91677.1|1464375_1466979_-|protease	ATP-dependent Clp protease chaperonin ATPase ClpB	protease	K4FB40	Cronobacter_phage	32.7	1.4e-123
ARD91678.1|1467166_1467925_-	secreted protein	NA	A0A1P8BMN5	Lactococcus_phage	47.6	2.0e-11
ARD91679.1|1469086_1470310_+|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	99.8	6.4e-233
ARD91680.1|1470321_1471080_+|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
>prophage 11
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	1846966	1857263	2250607	transposase	Lactococcus_phage(62.5%)	13	NA	NA
ARD92038.1|1846966_1847905_-	Glycosyl transferase family 2	NA	V9QJB1	Oenococcus_phage	50.6	1.0e-81
ARD92039.1|1847822_1849352_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92040.1|1849513_1850353_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.1	3.5e-49
ARD92041.1|1850364_1850625_-	Transposase	NA	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
ARD92042.1|1850736_1851063_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92043.1|1851134_1851554_-	deoxyuridine 5-triphosphate nucleotidohydrolase	NA	A5GYP0	Lactococcus_phage	95.7	9.0e-70
ARD92044.1|1851785_1852544_-|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
ARD92045.1|1852555_1853779_-|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	99.8	6.4e-233
ARD92046.1|1853854_1854379_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92047.1|1854641_1855226_+	cI-like repressor	NA	A5GYQ3	Lactococcus_phage	72.2	4.0e-60
ARD92048.1|1855231_1855666_+	hypothetical protein	NA	NA	NA	NA	NA
ARD92049.1|1855679_1856015_+	hypothetical protein	NA	NA	NA	NA	NA
ARD92050.1|1856081_1857263_+	Integrase	NA	Q9AZK8	Lactococcus_phage	47.5	2.0e-90
>prophage 12
CP015894	Lactococcus lactis subsp. cremoris strain 158 chromosome, complete genome	2250607	1948965	1998116	2250607	tRNA,transposase	Bacillus_phage(36.36%)	54	NA	NA
ARD92132.1|1948965_1949856_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD92133.1|1951108_1952248_-	transcription regulator/NMN adenylyltransferase/ribosylnicotinamide kinase	NA	A0A2K9VDE3	Lactobacillus_phage	55.4	1.5e-119
ARD92134.1|1952234_1953212_-	D-Isomer specific 2-hydroxyacid dehydrogenase NAD-dependent	NA	NA	NA	NA	NA
ARD92135.1|1953409_1954702_-	Peptidase U32 family	NA	Q6DW11	Phage_TP	33.7	1.0e-39
ARD92136.1|1954986_1955958_-	Peptidase U32 family	NA	NA	NA	NA	NA
ARD92137.1|1956129_1956411_+	hypothetical protein	NA	NA	NA	NA	NA
ARD92138.1|1956440_1957262_-	23S rRNA m(1)G-748 methyltransferase	NA	NA	NA	NA	NA
ARD92139.1|1957380_1958007_+	Copper homeostasis protein	NA	NA	NA	NA	NA
ARD92140.1|1958039_1959059_-	ABC-type transporter ATP-binding protein	NA	NA	NA	NA	NA
ARD92141.1|1959051_1959822_-	ABC-type multidrug transport system ATPase component	NA	A0A2H4PQG7	Staphylococcus_phage	32.8	4.9e-29
ARD92142.1|1959840_1960731_-	glycerophosphoryl diester phosphodiesterase	NA	A0A076G4Q2	Staphylococcus_phage	26.6	6.5e-09
ARD92143.1|1961244_1962084_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	4.6e-49
ARD92144.1|1962095_1962356_-	Transposase	NA	A0A1P8CWP5	Bacillus_phage	36.5	1.1e-09
ARD92145.1|1962624_1963023_+	Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase	NA	NA	NA	NA	NA
ARD92146.1|1963037_1963259_+	hypothetical protein	NA	NA	NA	NA	NA
ARD92147.1|1963270_1963630_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92148.1|1963692_1964382_-	LSU ribosomal protein L1P	NA	NA	NA	NA	NA
ARD92149.1|1964768_1965194_-	LSU ribosomal protein L11P	NA	NA	NA	NA	NA
ARD92150.1|1965329_1966094_-	ABC transporter permease protein	NA	NA	NA	NA	NA
ARD92151.1|1966093_1966972_-	bacitracin transport ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	26.4	1.9e-05
ARD92152.1|1967038_1967248_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92153.1|1967281_1967803_-	Peptide methionine sulfoxide reductase	NA	NA	NA	NA	NA
ARD92154.1|1967977_1968835_-	RNA binding domain protein	NA	NA	NA	NA	NA
ARD92155.1|1968879_1969338_-	Acetyltransferase GNAT family	NA	NA	NA	NA	NA
ARD92156.1|1969422_1969980_-	ribosome recycling factor	NA	NA	NA	NA	NA
ARD92157.1|1970135_1970852_-	uridylate kinase	NA	NA	NA	NA	NA
ARD92158.1|1970936_1971389_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92159.1|1971518_1972706_-	acetate kinase	NA	NA	NA	NA	NA
ARD92160.1|1972864_1974052_-	AckA1 acetate kinase	NA	NA	NA	NA	NA
ARD92161.1|1974243_1975182_-	Adenine-specific methyltransferase	NA	NA	NA	NA	NA
ARD92162.1|1975269_1975521_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92163.1|1975621_1977463_-	GTP-binding protein TypA/BipA-like protein	NA	A0A1S5SF82	Streptococcus_phage	35.4	1.2e-17
ARD92164.1|1977630_1978104_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92165.1|1978226_1979066_-|transposase	transposase for insertion sequence element IS981O	transposase	A0A1P8CWQ3	Bacillus_phage	41.4	4.6e-49
ARD92166.1|1979077_1979338_-	Transposase	NA	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
ARD92167.1|1979374_1979584_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92168.1|1979831_1980722_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD92169.1|1980782_1981241_-	hypothetical protein	NA	NA	NA	NA	NA
ARD92170.1|1981255_1981870_-	putative extracellular protein	NA	NA	NA	NA	NA
ARD92171.1|1982209_1982938_-	Two-component system response regulator LytTR family	NA	NA	NA	NA	NA
ARD92172.1|1983130_1983352_+	hypothetical protein	NA	NA	NA	NA	NA
ARD92173.1|1983385_1984357_+	glucokinase	NA	NA	NA	NA	NA
ARD92174.1|1984359_1984746_+	Rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
ARD92175.1|1984861_1985308_-	non-heme iron-binding ferritin	NA	A0A0A7RTZ1	Clostridium_phage	32.6	1.6e-16
ARD92176.1|1985473_1986061_+	Aspartic endopeptidase MEROPS family A24 (type IV prepilin peptidase family)	NA	NA	NA	NA	NA
ARD92177.1|1986100_1986955_-|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
ARD92178.1|1987096_1988191_-	Nucleotidyltransferase/DNA polymerase for DNA repair	NA	NA	NA	NA	NA
ARD92179.1|1988266_1988758_-|tRNA	Ala-tRNA(Pro) hydrolase	tRNA	NA	NA	NA	NA
ARD92180.1|1988833_1990327_-	arginine/ornithine antiporter	NA	NA	NA	NA	NA
ARD92181.1|1991910_1992855_-	carbamate kinase	NA	NA	NA	NA	NA
ARD92182.1|1992872_1994453_-	arginine/ornithine antiporter	NA	NA	NA	NA	NA
ARD92183.1|1994584_1995649_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
ARD92184.1|1995814_1997047_-	arginine deiminase	NA	NA	NA	NA	NA
ARD92185.1|1997261_1998116_+|transposase	transposase for insertion sequence element IS982B	transposase	NA	NA	NA	NA
>prophage 1
CP016685	Lactococcus lactis subsp. cremoris strain 158 plasmid p158A, complete sequence	75119	3148	43967	75119	bacteriocin,integrase,transposase	Lactococcus_phage(37.04%)	53	NA	NA
ARD90086.1|3148_3907_+	chromosome partitioning protein ParA	NA	H7BUL8	unidentified_phage	28.4	1.6e-16
ARD90087.1|3910_4639_+	chromosome segregation DNA-binding protein	NA	Q4ZC37	Staphylococcus_virus	27.7	7.2e-06
ARD90088.1|4668_5019_-	hypothetical protein	NA	A0A182BQ76	Lactococcus_phage	75.6	2.3e-10
ARD90089.1|5008_6475_-	DNA polymerase IV	NA	Q6DMX4	Streptococcus_phage	51.3	1.3e-123
ARD90090.1|6736_6925_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90091.1|7114_7447_+	type I restriction enzyme R protein	NA	NA	NA	NA	NA
ARD90092.1|7478_7817_-	Transposase	NA	NA	NA	NA	NA
ARD90093.1|7844_8483_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	80.7	2.7e-97
ARD90094.1|8565_9324_-|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
ARD90095.1|9335_10559_-|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
ARD90096.1|11673_11874_+	hypothetical protein	NA	Q9AZK6	Lactococcus_phage	51.9	2.8e-05
ARD90097.1|12004_12205_+	cold-shock DNA-binding protein family	NA	A0A1X9IGI9	Lactococcus_phage	54.7	1.6e-13
ARD90098.1|12481_12682_+	cold-shock DNA-binding protein family	NA	Q9AZD3	Lactococcus_phage	97.0	9.6e-30
ARD90099.1|13129_13969_-	Transposase	NA	U5P429	Shigella_phage	41.0	1.6e-46
ARD90100.1|13986_14277_-	Transposase	NA	NA	NA	NA	NA
ARD90101.1|14350_15169_-	Transposase	NA	A0A1B1P773	Bacillus_phage	43.3	1.8e-53
ARD90102.1|15165_15537_-	Transposase	NA	NA	NA	NA	NA
ARD90103.1|15848_16145_+	DNA-directed DNA polymerase	NA	NA	NA	NA	NA
ARD90104.1|16194_16425_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90105.1|17114_17453_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90106.1|17644_18325_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	81.9	4.4e-106
ARD90107.1|18437_18725_+|bacteriocin	bacteriocin leader domain-containing protein	bacteriocin	NA	NA	NA	NA
ARD90108.1|18734_19097_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90109.1|19283_19553_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90110.1|19697_20273_+	HTH-type transcriptional regulator	NA	NA	NA	NA	NA
ARD90111.1|20272_20512_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90112.1|20538_20739_+	isochorismatase	NA	NA	NA	NA	NA
ARD90113.1|20680_21163_+	Isochorismatase family protein	NA	NA	NA	NA	NA
ARD90114.1|21300_22650_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	50.7	5.4e-116
ARD90115.1|23135_23507_+	Transposase	NA	NA	NA	NA	NA
ARD90116.1|23503_24322_+	Transposase	NA	A0A1B1P773	Bacillus_phage	43.3	1.4e-53
ARD90117.1|24998_25889_+	Transposase	NA	NA	NA	NA	NA
ARD90118.1|25941_26757_+	Hydrolase HAD superfamily	NA	NA	NA	NA	NA
ARD90119.1|26878_27244_+	hypothetical protein	NA	NA	NA	NA	NA
ARD90120.1|27283_27559_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90121.1|27929_28205_-	cold shock-like protein cspE	NA	Q9AZD3	Lactococcus_phage	92.4	1.2e-27
ARD90122.1|28281_28962_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	84.1	8.5e-110
ARD90123.1|29262_29844_+	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.4	1.4e-36
ARD90124.1|29848_31774_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	36.6	5.7e-34
ARD90125.1|31815_32133_+	Plasmid replication protein repB	NA	NA	NA	NA	NA
ARD90126.1|32206_32527_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
ARD90127.1|32687_33155_+|integrase	phage integrase	integrase	A0A0A8WF08	Clostridium_phage	35.9	9.2e-15
ARD90128.1|33151_33574_-	selenium binding protein	NA	NA	NA	NA	NA
ARD90129.1|33903_35064_-	MFS transporter	NA	NA	NA	NA	NA
ARD90130.1|36709_36964_+	Transposase	NA	NA	NA	NA	NA
ARD90131.1|37559_37823_+|transposase	transposase	transposase	Q6J1X2	Lactobacillus_phage	33.0	2.2e-05
ARD90132.1|37957_38716_-|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	99.6	2.6e-136
ARD90133.1|38727_39951_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
ARD90134.1|40176_40443_-	hypothetical protein	NA	NA	NA	NA	NA
ARD90135.1|40456_41254_-	plasmid partition protein	NA	A0A1V0DZZ0	Clostridioides_phage	32.6	1.1e-20
ARD90136.1|41397_41955_-	invertase/resolvase/recombinase	NA	A0A0A8WIK3	Clostridium_phage	43.1	2.9e-31
ARD90137.1|42367_42511_-	hypothetical protein	NA	A0A182BQ76	Lactococcus_phage	73.2	1.6e-10
ARD90138.1|42500_43967_-	DNA polymerase IV	NA	Q6DMX4	Streptococcus_phage	51.3	6.5e-123
