The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	151693	159176	2571427	integrase	Lactococcus_phage(28.57%)	12	145042:145101	162889:163022
145042:145101	attL	AGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGGGTATCTTACACCTAATCAATT	NA	NA	NA	NA
ARE19685.1|151693_151894_+	hypothetical protein	NA	Q9AZK6	Lactococcus_phage	51.9	2.2e-05
ARE19686.1|152024_152225_+	cold-shock DNA-binding protein family	NA	NA	NA	NA	NA
ARE19687.1|152502_152703_+	cold shock-like protein cspE	NA	Q9AZD3	Lactococcus_phage	92.4	6.9e-28
ARE19688.1|153217_153457_+	membrane protein	NA	NA	NA	NA	NA
ARE19689.1|153486_154047_+	hypothetical protein	NA	NA	NA	NA	NA
ARE19690.1|154056_154245_+	hypothetical protein	NA	NA	NA	NA	NA
ARE19691.1|154265_154817_+	hypothetical protein	NA	NA	NA	NA	NA
ARE19692.1|154894_155248_-	Transposase	NA	Q6J1X2	Lactobacillus_phage	45.2	3.6e-19
ARE19693.1|155302_155983_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	82.7	6.1e-108
ARE19694.1|156182_157049_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.9	1.2e-60
ARE19695.1|157696_158155_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	80.9	2.1e-67
ARE19696.1|158633_159176_-|integrase	integrase/recombinase plasmid associated	integrase	E2ELN7	Clostridium_phage	35.3	1.4e-17
162889:163022	attR	AATTGATTAGGTGTAAGATACCCTAAACTTTGATGGATTCGTTTTGAATTATAAAAGGCTTCGATGTACCAGAAAATACTCTGATAGGCTTCTTCAAAGTTCTTATATTTAAATTGATACACGCACTCTCTTTT	NA	NA	NA	NA
>prophage 2
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	498308	510436	2571427		uncultured_virus(30.0%)	14	NA	NA
ARE20046.1|498308_498626_+	Thiol-disulfide isomerase and thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
ARE20047.1|498711_499338_+	EMAP domain	NA	NA	NA	NA	NA
ARE20048.1|499500_500841_+	NADH oxidase H2O-forming	NA	NA	NA	NA	NA
ARE20049.1|500929_501319_+	single-stranded DNA-binding protein	NA	A0A218MNB4	uncultured_virus	47.9	1.1e-24
ARE20050.1|501438_501723_+	Co-chaperonin GroES (HSP10)	NA	A0A221S386	uncultured_virus	44.1	3.1e-13
ARE20051.1|501811_503440_+	Chaperonin GroEL (HSP60 family)	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
ARE20052.1|503485_504298_-	Metal-dependent hydrolase of the beta-lactamase superfamily I	NA	A0A0C5AJ83	Bacteriophage	38.1	3.1e-34
ARE20053.1|504466_505909_-	PAS/PAC sensor signal transduction histidine kinase	NA	W8CYF6	Bacillus_phage	33.0	1.4e-32
ARE20054.1|505901_506603_-	DNA-binding response regulator OmpR family (Rec-wHTH domains)	NA	W8CYM9	Bacillus_phage	39.7	1.2e-42
ARE20055.1|506780_507416_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.0	5.4e-74
ARE20056.1|507547_508408_+	DNA polymerase III delta prime subunit	NA	M1NSC1	Streptococcus_phage	45.2	5.0e-67
ARE20057.1|508459_509242_+	Phosphorelay inhibitor	NA	NA	NA	NA	NA
ARE20058.1|509234_509561_+	Regulator of replication initiation timing	NA	NA	NA	NA	NA
ARE20059.1|509560_510436_+	methyltransferase	NA	M1PLC5	Streptococcus_phage	65.4	8.7e-99
>prophage 3
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	947873	981701	2571427	tail,terminase,integrase,holin	Lactococcus_phage(60.0%)	49	942339:942354	976003:976018
942339:942354	attL	GTTGGTCAGAATGGAA	NA	NA	NA	NA
ARE20461.1|947873_949004_-|integrase	Phage integrase	integrase	A0A1B1IMP1	Lactococcus_phage	33.8	1.8e-43
ARE20462.1|949144_950029_-	prophage protein	NA	NA	NA	NA	NA
ARE20463.1|950086_950674_-	prophage protein	NA	Q9AZW4	Lactococcus_phage	76.2	1.5e-83
ARE20464.1|950684_951224_-	Transcriptional regulator xre family	NA	A0A1B1IMP5	Lactococcus_phage	68.6	8.6e-49
ARE20465.1|951452_951671_+	prophage protein	NA	NA	NA	NA	NA
ARE20466.1|951630_952305_-	prophage protein	NA	Q7Y4L7	Streptococcus_phage	52.3	5.2e-59
ARE20467.1|952459_952693_+	prophage protein	NA	A0A1B1IMQ9	Lactococcus_phage	97.4	7.3e-37
ARE20468.1|952709_953432_+	Phage anti-repressor protein	NA	O48505	Lactococcus_phage	54.5	1.3e-68
ARE20469.1|953453_953570_+	prophage protein	NA	NA	NA	NA	NA
ARE20470.1|953571_953823_+	prophage protein	NA	NA	NA	NA	NA
ARE20471.1|953910_954075_+	prophage protein	NA	NA	NA	NA	NA
ARE20472.1|954071_954281_+	prophage protein	NA	NA	NA	NA	NA
ARE20473.1|954306_954495_+	prophage protein	NA	NA	NA	NA	NA
ARE20474.1|954504_954939_+	single-strand binding protein	NA	Q9AYU6	Lactococcus_phage	70.9	1.8e-49
ARE20475.1|954949_955798_+	DNA replication protein dnaD	NA	A0A1L2BY83	Clostridium_phage	44.3	8.3e-14
ARE20476.1|955801_956197_+	prophage protein	NA	NA	NA	NA	NA
ARE20477.1|956193_956412_+	prophage protein	NA	NA	NA	NA	NA
ARE20478.1|956408_956918_+	prophage protein	NA	NA	NA	NA	NA
ARE20479.1|957053_957371_+	prophage protein	NA	NA	NA	NA	NA
ARE20480.1|957363_957924_+	prophage protein	NA	Q77MW7	Lactococcus_phage	56.3	6.0e-45
ARE20481.1|957920_958265_+	prophage protein	NA	Q9AZU2	Lactococcus_phage	93.0	1.2e-56
ARE20482.1|958257_958656_+	prophage protein	NA	Q9AZ74	Lactococcus_phage	32.7	9.6e-05
ARE20483.1|958830_959004_+	prophage protein	NA	NA	NA	NA	NA
ARE20484.1|959003_959165_+	prophage protein	NA	A0A1P8BKU8	Lactococcus_phage	83.0	5.0e-21
ARE20485.1|959164_959341_+	prophage protein	NA	Q94M82	Lactococcus_phage	94.8	4.5e-23
ARE20486.1|960218_960491_+	prophage protein	NA	Q8LTL7	Lactococcus_phage	92.2	1.0e-42
ARE20487.1|960492_960666_+	prophage protein	NA	Q8LTR5	Lactococcus_phage	93.0	3.5e-20
ARE20488.1|960741_961041_+	prophage protein	NA	NA	NA	NA	NA
ARE20489.1|961530_961977_+|terminase	terminase terS	terminase	NA	NA	NA	NA
ARE20490.1|962120_963860_+|terminase	terminase terL	terminase	A3F641	Streptococcus_phage	62.3	9.5e-214
ARE20491.1|964710_965904_+	prophage protein	NA	A0A2P0ZLC9	Lactobacillus_phage	30.8	1.9e-40
ARE20492.1|965890_966709_+	Phage ATP-dependent endopeptidase	NA	A3F644	Streptococcus_phage	41.9	1.4e-34
ARE20493.1|966708_967854_+	prophage protein	NA	A3F645	Streptococcus_phage	46.7	2.4e-80
ARE20494.1|967864_968020_+	prophage protein	NA	NA	NA	NA	NA
ARE20495.1|968032_968338_+	prophage protein	NA	A3F647	Streptococcus_phage	43.0	1.1e-11
ARE20496.1|968334_968721_+	prophage protein	NA	A0A1S5SFE6	Streptococcus_phage	42.7	4.8e-17
ARE20497.1|968713_969118_+	prophage protein	NA	A0A2P0ZLD7	Lactobacillus_phage	41.3	4.4e-13
ARE20498.1|969114_969504_+	prophage protein	NA	NA	NA	NA	NA
ARE20499.1|969518_970097_+|tail	phage major tail protein	tail	A3F651	Streptococcus_phage	42.9	4.8e-29
ARE20500.1|970153_970459_+	prophage protein	NA	NA	NA	NA	NA
ARE20501.1|970734_971298_+	prophage protein	NA	NA	NA	NA	NA
ARE20502.1|971375_973859_+|tail	phage tail component	tail	A0A1S5SFC1	Streptococcus_phage	38.4	4.2e-90
ARE20503.1|973822_975463_+	prophage TMP	NA	A3F654	Streptococcus_phage	41.1	5.7e-27
ARE20504.1|975459_976986_+	prophage DIT	NA	Q9AZL3	Lactococcus_phage	35.7	1.4e-75
976003:976018	attR	GTTGGTCAGAATGGAA	NA	NA	NA	NA
ARE20505.1|976985_980138_+	prophage TAL	NA	A0A1P8BKD5	Lactococcus_phage	44.9	8.8e-210
ARE20506.1|980148_980385_+	prophage protein	NA	NA	NA	NA	NA
ARE20507.1|980397_980622_+	prophage protein	NA	A0A1B1IMU8	Lactococcus_phage	98.6	1.4e-32
ARE20508.1|980634_980922_+|holin	prophage holin protein	holin	Q9AZL0	Lactococcus_phage	98.9	1.6e-46
ARE20509.1|980921_981701_+	prophage lysin protein	NA	Q9AZW7	Lactococcus_phage	98.1	1.5e-126
>prophage 4
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1004299	1018666	2571427	tail	Lactococcus_phage(84.21%)	19	NA	NA
ARE20532.1|1004299_1005928_+	prophage protein	NA	A0A2K8I8E7	Lactococcus_phage	59.3	7.3e-184
ARE20533.1|1005940_1006225_+	prophage protein	NA	A0A023J2U4	Lactococcus_phage	63.2	3.7e-27
ARE20534.1|1006239_1007253_+	prophage protein	NA	Q37859	Lactococcus_phage	60.9	1.4e-105
ARE20535.1|1007430_1007946_+	prophage protein	NA	A0A126HA84	Lactococcus_phage	46.8	1.5e-37
ARE20536.1|1007938_1009087_+	prophage protein	NA	A0A126HA32	Lactococcus_phage	48.7	4.1e-88
ARE20537.1|1009205_1009481_+	prophage protein	NA	A0A126HAQ3	Lactococcus_phage	38.8	2.5e-12
ARE20538.1|1009477_1009792_+	prophage protein	NA	H9ED09	Lactococcus_virus	64.4	3.1e-30
ARE20539.1|1009805_1010144_+	prophage protein	NA	R9R0Z2	Lactococcus_phage	50.9	5.4e-25
ARE20540.1|1010136_1010502_+	prophage protein	NA	A0A1W6JH10	Lactococcus_phage	49.6	5.5e-23
ARE20541.1|1010517_1011192_+	prophage protein	NA	A0A126HD64	Lactococcus_phage	51.2	5.9e-55
ARE20542.1|1011227_1011506_+	prophage protein	NA	A0A2K8IJZ2	Lactococcus_phage	51.2	4.2e-15
ARE20543.1|1011577_1012063_+	prophage protein	NA	B3TJP9	Lactococcus_virus	32.5	1.7e-11
ARE20544.1|1012066_1014547_+|tail	Minor tail protein gp26-like protein	tail	A0A023J3B5	Lactococcus_phage	54.9	1.1e-98
ARE20545.1|1014550_1015909_+	prophage protein	NA	C7T1V3	Lactococcus_virus	51.2	2.0e-134
ARE20546.1|1015908_1016508_+	prophage protein	NA	A0A126H9C5	Lactococcus_phage	54.1	9.3e-36
ARE20547.1|1016480_1017032_+	prophage protein	NA	A0A2H4ESG5	Lactococcus_phage	45.2	6.4e-31
ARE20548.1|1017021_1017435_+	prophage protein	NA	R9R117	Lactococcus_phage	54.8	2.1e-15
ARE20549.1|1017424_1018312_+	prophage BPP	NA	Q1RNC9	Lactococcus_phage	42.9	3.9e-46
ARE20550.1|1018342_1018666_+	prophage protein	NA	A0A1X9IGI3	Lactococcus_phage	49.5	1.9e-19
>prophage 5
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1092331	1115781	2571427		Staphylococcus_phage(21.43%)	22	NA	NA
ARE20627.1|1092331_1093024_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.4	2.7e-31
ARE20628.1|1093016_1093952_+	cell division protein ftsX-like protein	NA	NA	NA	NA	NA
ARE20629.1|1094053_1095031_-	ribonucleoside-diphosphate reductase class Ib beta subunit	NA	A0A096XT60	Enterococcus_phage	66.0	1.9e-118
ARE20630.1|1095379_1097548_-	ribonucleoside-diphosphate reductase class Ib alpha subunit	NA	A8E2R1	Enterococcus_phage	61.1	2.3e-257
ARE20631.1|1097683_1098106_-	Ribonucleotide reduction protein	NA	A0A142F1R4	Bacillus_phage	37.3	2.3e-12
ARE20632.1|1098107_1098326_-	ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
ARE20633.1|1098499_1099138_-	acyl-phosphate glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
ARE20634.1|1099412_1101347_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.5	1.1e-125
ARE20635.1|1101551_1102091_+	isochorismatase	NA	NA	NA	NA	NA
ARE20636.1|1102083_1102917_+	DNA polymerase III epsilon subunit related 3-5 exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.4	5.3e-21
ARE20637.1|1102913_1103363_+	Acetyltransferase GNAT family	NA	NA	NA	NA	NA
ARE20638.1|1103637_1106112_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	4.2e-98
ARE20639.1|1106137_1107043_-	Mg2+ and Co2+ transporter	NA	NA	NA	NA	NA
ARE20640.1|1107511_1108600_+	riboflavin biosynthesis protein RibD	NA	A0A1V0SE20	Indivirus	38.8	1.9e-50
ARE20641.1|1108599_1109250_+	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	43.1	9.4e-42
ARE20642.1|1109258_1110455_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.5	1.4e-112
ARE20643.1|1110482_1110947_+	Riboflavin synthase beta chain	NA	A0A2H4PQS3	Staphylococcus_phage	53.7	1.8e-39
ARE20644.1|1111049_1111502_+	signal peptidase II Aspartic peptidase MEROPS family A08	NA	NA	NA	NA	NA
ARE20645.1|1111562_1112468_+	ribosomal large subunit pseudouridine synthase D	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	5.4e-11
ARE20646.1|1112616_1113060_+	hypothetical protein	NA	NA	NA	NA	NA
ARE20647.1|1113250_1114822_+	hypothetical protein	NA	NA	NA	NA	NA
ARE20648.1|1114824_1115781_+	Glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	4.0e-49
>prophage 6
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1317302	1328317	2571427		Lactobacillus_phage(33.33%)	13	NA	NA
ARE20837.1|1317302_1318319_-	esterase	NA	A0A167RJ59	Powai_lake_megavirus	27.3	6.2e-16
ARE20838.1|1318789_1319119_+	hypothetical protein	NA	NA	NA	NA	NA
ARE20839.1|1319136_1319418_+	hypothetical protein	NA	NA	NA	NA	NA
ARE20840.1|1319601_1320084_-	RecA protein	NA	A0A2D1GPX2	Mycobacterium_phage	39.5	3.2e-26
ARE20841.1|1320667_1321879_-	flavoprotein	NA	A0A2P0ZL82	Lactobacillus_phage	57.4	3.5e-58
ARE20842.1|1321932_1322538_-	flavoprotein	NA	A0A2P0ZL77	Lactobacillus_phage	52.7	8.8e-50
ARE20843.1|1322553_1323477_-	Membrane-associated lipoprotein for thiamine biosynthesis	NA	NA	NA	NA	NA
ARE20844.1|1323656_1324709_-	nucleoside-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	39.1	5.2e-58
ARE20845.1|1324773_1325253_-	nucleoside deoxyribosyltransferase	NA	A0A1D3SPR3	Enterococcus_phage	47.4	4.5e-33
ARE20846.1|1325236_1325791_-	nucleotide-binding protein	NA	A0A1D3SNB7	Enterococcus_phage	41.9	1.5e-27
ARE20847.1|1325793_1326444_-	Deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	49.5	2.2e-54
ARE20848.1|1327259_1327421_-	RecA protein	NA	NA	NA	NA	NA
ARE20849.1|1327762_1328317_-	Glycerol uptake facilitator related permease (Major Intrinsic Protein Family)	NA	M1HQW3	Paramecium_bursaria_Chlorella_virus	29.6	2.7e-21
>prophage 7
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1389327	1401073	2571427		Streptococcus_phage(33.33%)	10	NA	NA
ARE20903.1|1389327_1390590_-	Integrase	NA	A0A1S5S9U4	Streptococcus_phage	29.7	3.5e-32
ARE20904.1|1390667_1390916_-	hypothetical protein	NA	A0A1X9IGE0	Lactococcus_phage	50.7	2.9e-15
ARE20905.1|1390955_1391249_-	hypothetical protein	NA	NA	NA	NA	NA
ARE20906.1|1391633_1393418_-	hypothetical protein	NA	A0A1X9I6C7	Streptococcus_phage	31.4	1.1e-76
ARE20907.1|1393445_1394504_-	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	43.7	1.1e-74
ARE20908.1|1394973_1396368_-	DNA polymerase IV	NA	Q6DMX4	Streptococcus_phage	48.9	9.2e-119
ARE20909.1|1396380_1397157_-	transcriptional regulator	NA	A0A1B0Y2R0	Lactobacillus_phage	39.5	8.2e-08
ARE20910.1|1397467_1398634_-	UDP-glucose 6-dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	42.2	9.2e-80
ARE20911.1|1398633_1399413_-	phage DNA methylase	NA	K9MDN9	Sulfolobus_virus	28.0	9.3e-12
ARE20912.1|1399483_1401073_-	ATPase component of ABC transporter	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.6e-53
>prophage 8
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1655201	1665504	2571427	protease	Synechococcus_phage(33.33%)	9	NA	NA
ARE21133.1|1655201_1656758_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	45.6	8.0e-71
ARE21134.1|1656933_1657476_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.9	1.8e-09
ARE21135.1|1657612_1658650_-	UDP-galactose 4-epimerase	NA	NA	NA	NA	NA
ARE21136.1|1658781_1659312_+	Transcriptional regulator TetR family	NA	NA	NA	NA	NA
ARE21137.1|1659362_1660775_-	Multidrug resistance ABC transporter ATP-binding and permease protein	NA	W8CYL7	Bacillus_phage	22.7	1.2e-09
ARE21138.1|1660775_1660952_-	ABC-type multidrug transport system ATPase and permease component	NA	NA	NA	NA	NA
ARE21139.1|1661118_1661667_-	formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	31.7	7.2e-19
ARE21140.1|1661695_1662712_-	Phosphoribosylformylglycinamidine cyclo-ligase	NA	M4QRQ6	Synechococcus_phage	41.8	2.9e-61
ARE21141.1|1662900_1665504_-|protease	ATP-dependent Clp protease chaperonin ATPase ClpB	protease	K4FB40	Cronobacter_phage	33.1	1.1e-125
>prophage 9
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1745734	1791739	2571427	terminase,holin,integrase	Lactococcus_phage(86.54%)	65	1749285:1749305	1788205:1788225
ARE21223.1|1745734_1746646_-	Surface antigen	NA	W5R8Q8	Staphylococcus_phage	38.5	4.0e-06
ARE21224.1|1746758_1747595_-	phosphohydrolase	NA	NA	NA	NA	NA
ARE21225.1|1748281_1749190_+	hypothetical protein	NA	NA	NA	NA	NA
1749285:1749305	attL	AAGTTATCCATGAGATCCATG	NA	NA	NA	NA
ARE21226.1|1749478_1749691_-	hypothetical protein	NA	A0A182BQ74	Lactococcus_phage	38.2	7.9e-06
ARE21227.1|1750600_1751380_-	phage lysin	NA	Q9AZW7	Lactococcus_phage	96.5	1.8e-124
ARE21228.1|1751379_1751679_-|holin	phage holin	holin	Q9AZR2	Lactococcus_phage	99.0	2.9e-46
ARE21229.1|1751691_1752042_-	hypothetical protein	NA	A0A1P8BKU2	Lactococcus_phage	91.4	1.1e-49
ARE21230.1|1752068_1752893_-	phage BPP	NA	A0A059NTA1	Lactococcus_phage	70.1	1.5e-20
ARE21231.1|1752892_1753030_-	hypothetical protein	NA	NA	NA	NA	NA
ARE21232.1|1753026_1755456_-	phage TAL	NA	A0A059NT86	Lactococcus_phage	71.8	5.4e-311
ARE21233.1|1755467_1755833_-	phage DIT	NA	A0A059NT91	Lactococcus_phage	98.3	7.1e-63
ARE21234.1|1755845_1760627_-	phage TMP	NA	A0A059NT57	Lactococcus_phage	83.6	0.0e+00
ARE21235.1|1760657_1761029_-	prophage protein	NA	A0A059NT78	Lactococcus_phage	100.0	1.1e-47
ARE21236.1|1761052_1761463_-	prophage protein	NA	A0A059NTA0	Lactococcus_phage	99.3	2.8e-68
ARE21237.1|1761536_1761962_-	prophage protein	NA	A0A182BQ87	Lactococcus_phage	92.1	2.5e-67
ARE21238.1|1761974_1762337_-	prophage protein	NA	A0A182BQ88	Lactococcus_phage	99.2	1.1e-60
ARE21239.1|1762336_1762879_-	prophage protein	NA	A0A059NT55	Lactococcus_phage	98.9	2.5e-96
ARE21240.1|1762868_1763222_-	prophage protein	NA	A0A059NT74	Lactococcus_phage	94.9	1.9e-57
ARE21241.1|1763202_1763535_-	prophage protein	NA	A0A059NT99	Lactococcus_phage	95.5	3.2e-54
ARE21242.1|1763554_1764673_-	surface protein (Ig-like domains)	NA	A0A182BQ73	Lactococcus_phage	84.3	1.1e-149
ARE21243.1|1764684_1765341_-	prophage protein	NA	A0A182BQ92	Lactococcus_phage	89.9	9.7e-79
ARE21244.1|1765456_1765615_-	prophage protein	NA	NA	NA	NA	NA
ARE21245.1|1765687_1766824_-	NAD+--asparagine ADP-ribosyltransferase	NA	A0A059NT80	Lactococcus_phage	98.4	3.0e-200
ARE21246.1|1766833_1767208_-	prophage protein	NA	NA	NA	NA	NA
ARE21247.1|1767209_1767497_-	ribosomal protein	NA	A0A059NT85	Lactococcus_phage	94.7	2.4e-45
ARE21248.1|1767493_1767658_-	prophage protein	NA	NA	NA	NA	NA
ARE21249.1|1767719_1769123_-	prophage protein	NA	A0A182BQ97	Lactococcus_phage	98.5	3.5e-251
ARE21250.1|1769131_1770367_-|terminase	Phage terminase large subunit	terminase	A0A182BQ98	Lactococcus_phage	95.6	1.2e-234
ARE21251.1|1770356_1770869_-|terminase	Phage terminase small subunit	terminase	A0A182BQ99	Lactococcus_phage	95.9	1.4e-80
ARE21252.1|1771318_1771744_-	prophage protein	NA	A0A059NT50	Lactococcus_phage	98.6	1.5e-75
ARE21253.1|1772077_1772299_-	prophage protein	NA	A0A1P8BL06	Lactococcus_phage	100.0	6.4e-35
ARE21254.1|1772307_1772538_-	prophage protein	NA	NA	NA	NA	NA
ARE21255.1|1772680_1772905_-	prophage protein	NA	NA	NA	NA	NA
ARE21256.1|1772901_1773177_-	prophage protein	NA	NA	NA	NA	NA
ARE21257.1|1773173_1773737_-	prophage protein	NA	Q9MBV6	Lactococcus_phage	65.3	1.1e-33
ARE21258.1|1773726_1774080_-	prophage protein	NA	Q9AZU2	Lactococcus_phage	86.9	7.2e-20
ARE21259.1|1774076_1774508_-	prophage protein	NA	NA	NA	NA	NA
ARE21260.1|1774510_1774930_-	deoxyuridine 5-triphosphate nucleotidohydrolase	NA	A5GYP0	Lactococcus_phage	94.9	1.3e-68
ARE21261.1|1774926_1775196_-	prophage protein	NA	A0A1W6JJZ9	Lactococcus_phage	52.9	6.5e-21
ARE21262.1|1775192_1775699_-	prophage protein	NA	A0A1P8BLY6	Lactococcus_phage	47.7	6.9e-32
ARE21263.1|1775691_1776003_-	prophage protein	NA	NA	NA	NA	NA
ARE21264.1|1775983_1776133_-	prophage protein	NA	Q9AZP4	Lactococcus_phage	94.9	5.5e-14
ARE21265.1|1776240_1776651_-	prophage protein	NA	A5GZ50	Lactococcus_phage	100.0	1.3e-76
ARE21266.1|1776640_1776805_-	prophage protein	NA	A0A1P8BKY2	Lactococcus_phage	98.1	5.5e-23
ARE21267.1|1776814_1777705_-	primosomal protein DnaI	NA	Q38098	Lactococcus_phage	99.7	4.6e-164
ARE21268.1|1777714_1778521_-	prophage protein	NA	A0A1P8BL25	Lactococcus_phage	99.1	4.4e-57
ARE21269.1|1778645_1779071_-	single-strand binding protein	NA	Q9AZV6	Lactococcus_phage	99.3	1.6e-74
ARE21270.1|1779063_1779822_-	prophage protein	NA	Q0ILF6	Lactococcus_phage	96.0	1.1e-142
ARE21271.1|1779830_1780349_-	prophage protein	NA	Q9XJE3	Lactococcus_phage	98.3	9.1e-88
ARE21272.1|1780464_1780680_-	prophage protein	NA	Q38272	Lactococcus_phage	100.0	2.4e-34
ARE21273.1|1780679_1780880_-	prophage protein	NA	A0A1X9I6I3	Streptococcus_phage	43.5	1.1e-06
ARE21274.1|1781030_1781183_+	prophage protein	NA	NA	NA	NA	NA
ARE21275.1|1781345_1781474_-	prophage protein	NA	Q38332	Lactococcus_phage	100.0	4.3e-15
ARE21276.1|1781485_1781824_-	prophage protein	NA	A0A1B1IMQ1	Lactococcus_phage	99.1	9.8e-59
ARE21277.1|1781837_1782629_-	prophage protein	NA	Q38330	Lactococcus_phage	79.0	9.9e-110
ARE21278.1|1782641_1782890_-	HTH-type transcriptional regulator	NA	J7KK54	Streptococcus_phage	51.7	2.9e-07
ARE21279.1|1783077_1783749_+	prophage protein	NA	NA	NA	NA	NA
ARE21280.1|1784032_1784521_+	Transcriptional regulator xre family	NA	Q9AZW3	Lactococcus_phage	76.4	3.4e-36
ARE21281.1|1784530_1785118_+	prophage protein	NA	Q9AZW4	Lactococcus_phage	98.5	4.9e-106
ARE21282.1|1785182_1785938_+	prophage protein	NA	A0A0P0IXE0	Lactobacillus_phage	46.2	1.8e-23
ARE21283.1|1786039_1786816_+	Glycoside hydrolase family 25	NA	A0A1P8BMN5	Lactococcus_phage	98.1	4.2e-97
ARE21284.1|1786950_1788090_+|integrase	Phage integrase	integrase	A0A1B1IMP1	Lactococcus_phage	97.6	1.4e-210
ARE21285.1|1788194_1789268_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.3	2.0e-60
1788205:1788225	attR	AAGTTATCCATGAGATCCATG	NA	NA	NA	NA
ARE21286.1|1789330_1790263_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	30.8	9.8e-24
ARE21287.1|1790446_1791739_-	Uracil permease	NA	Q9KX94	Enterobacteria_phage	35.9	1.6e-61
>prophage 10
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1924762	1934623	2571427	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
ARE21409.1|1924762_1925524_-	phosphate transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
ARE21410.1|1925689_1926499_-	phosphate ABC transporter ATP-binding protein PhoT family	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
ARE21411.1|1926532_1927426_-	phosphate ABC transporter membrane protein 2 PhoT family	NA	NA	NA	NA	NA
ARE21412.1|1927425_1928349_-	phosphate transport system permease protein pstD	NA	NA	NA	NA	NA
ARE21413.1|1928469_1929294_-	phosphate ABC transporter substrate-binding protein PhoT family	NA	E3SNT9	Prochlorococcus_phage	29.4	1.8e-05
ARE21414.1|1929666_1930563_-	phosphate transport substrate binding protein pstF	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
ARE21415.1|1930840_1931308_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	56.6	2.7e-43
ARE21416.1|1931339_1931897_-	Lysophospholipase L1 related esterase	NA	NA	NA	NA	NA
ARE21417.1|1932004_1934623_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	33.3	1.9e-64
>prophage 11
CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1949044	1966041	2571427	integrase	Lactococcus_phage(88.89%)	24	1939569:1939584	1963769:1963784
1939569:1939584	attL	TTGTCAGTAACTTTTT	NA	NA	NA	NA
ARE21430.1|1949044_1949245_-	cold shock-like protein cspE	NA	Q9AZD3	Lactococcus_phage	93.9	1.4e-28
ARE21431.1|1950570_1951104_-	prophage protein	NA	NA	NA	NA	NA
ARE21432.1|1951106_1951595_-	prophage protein	NA	A0A0N9SGM1	Paenibacillus_phage	40.5	3.7e-14
ARE21433.1|1951793_1952087_-	prophage protein	NA	NA	NA	NA	NA
ARE21434.1|1952079_1952355_-	prophage protein	NA	NA	NA	NA	NA
ARE21435.1|1952499_1953006_-	Acetyltransferase	NA	Q9AZG4	Lactococcus_phage	100.0	4.2e-90
ARE21436.1|1953155_1953509_-	prophage protein	NA	A0A1P8BKB1	Lactococcus_phage	63.6	1.3e-05
ARE21437.1|1953505_1953868_-	prophage protein	NA	Q9AZG6	Lactococcus_phage	99.2	1.7e-56
ARE21438.1|1953885_1954458_-	prophage protein	NA	Q9AZG7	Lactococcus_phage	96.8	1.4e-94
ARE21439.1|1954619_1954826_-	prophage protein	NA	Q9AZG9	Lactococcus_phage	97.1	1.4e-31
ARE21440.1|1954844_1955027_-	prophage protein	NA	Q9AZH0	Lactococcus_phage	98.3	5.3e-27
ARE21441.1|1955396_1957094_-	prophage protein	NA	Q9AZH2	Lactococcus_phage	96.0	6.6e-244
ARE21442.1|1957103_1957373_-	prophage protein	NA	Q9AZH3	Lactococcus_phage	93.3	3.4e-38
ARE21443.1|1957369_1957522_-	prophage protein	NA	Q9AZH4	Lactococcus_phage	86.0	1.7e-15
ARE21444.1|1957530_1957773_-	prophage protein	NA	Q9AZH5	Lactococcus_phage	91.3	7.3e-16
ARE21445.1|1957774_1957945_-	prophage protein	NA	Q9AZH6	Lactococcus_phage	100.0	4.6e-25
ARE21446.1|1958016_1958706_-	prophage protein	NA	R9QNB1	Lactococcus_phage	96.8	9.8e-114
ARE21447.1|1958820_1959027_-	prophage protein, transcriptional regulator	NA	NA	NA	NA	NA
ARE21448.1|1959175_1959883_+	prophage protein	NA	Q9AZH9	Lactococcus_phage	92.3	9.1e-115
ARE21449.1|1959963_1961169_+|integrase	Phage integrase	integrase	Q9AZI0	Lactococcus_phage	54.1	5.7e-117
ARE21450.1|1961295_1962210_-	Lipid kinase from diacylglycerol kinase family	NA	A0A1V0SBJ0	Catovirus	25.8	5.4e-11
ARE21451.1|1962365_1962878_-	HD superfamily hydrolase	NA	NA	NA	NA	NA
ARE21452.1|1963210_1963444_+	SSU ribosomal protein S20P	NA	NA	NA	NA	NA
ARE21453.1|1963536_1966041_-	ATP-dependent DNA helicase RecD/TraA family	NA	A0A1W6JK95	Lactococcus_phage	25.6	1.3e-43
1963769:1963784	attR	TTGTCAGTAACTTTTT	NA	NA	NA	NA
