The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	448576	517954	5421726	capsid,head,terminase,portal,tail,protease,integrase,tRNA	uncultured_Caudovirales_phage(61.11%)	75	466184:466201	482179:482196
AXQ80447.1|448576_449524_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
AXQ80448.1|449538_450048_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
AXQ80449.1|450176_451301_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AXQ80450.1|451272_451746_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
AXQ80451.1|451771_452314_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80452.1|452318_452891_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
AXQ80453.1|452894_453713_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
AXQ80454.1|453709_453967_+	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
AXQ85062.1|453942_454497_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AXQ80455.1|460292_460514_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ80456.1|460807_463918_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXQ80457.1|463930_465070_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXQ80458.1|465448_466099_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
466184:466201	attL	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
AXQ80459.1|466374_467601_+|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
AXQ80460.1|467693_468635_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80461.1|468816_469101_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
AXQ80462.1|469111_469891_+	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
AXQ80463.1|470014_470209_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
AXQ85063.1|470342_470612_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.4	2.4e-44
AXQ80464.1|470604_470793_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80465.1|470785_471100_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80466.1|471096_471465_+	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
AXQ80467.1|471461_471827_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80468.1|471826_473962_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
AXQ80469.1|474304_474640_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80470.1|474688_475201_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ80471.1|475464_476631_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
AXQ80472.1|476682_477243_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
AXQ80473.1|477244_478486_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
AXQ80474.1|478482_478818_+|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
AXQ80475.1|478814_479114_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
AXQ80476.1|479113_479557_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
AXQ80477.1|479683_479875_+|terminase	terminase	terminase	NA	NA	NA	NA
AXQ80478.1|479832_480189_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
AXQ80479.1|480172_481834_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
AXQ80480.1|481836_482028_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80481.1|482181_482478_-	Fis family transcriptional regulator	NA	NA	NA	NA	NA
482179:482196	attR	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
AXQ80482.1|482502_483468_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AXQ80483.1|483625_483820_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ80484.1|483825_484707_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AXQ80485.1|484718_486170_-	sodium/pantothenate symporter	NA	NA	NA	NA	NA
AXQ80486.1|486159_486402_-	DUF997 family protein	NA	NA	NA	NA	NA
AXQ80487.1|486512_487862_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AXQ80488.1|487872_488340_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AXQ80489.1|488362_488815_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AXQ80490.1|489038_489647_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
AXQ80491.1|489646_490648_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
AXQ80492.1|490876_491068_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80493.1|491147_493088_+	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
AXQ80494.1|493209_493416_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ80495.1|493393_494437_+	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
AXQ80496.1|494507_495500_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AXQ80497.1|495499_495988_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AXQ80498.1|495995_496577_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AXQ80499.1|496579_498049_+	ribonuclease G	NA	NA	NA	NA	NA
AXQ80500.1|498086_501884_+	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
AXQ80501.1|501972_503418_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AXQ80502.1|503453_504383_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA	NA
AXQ80503.1|504514_504718_+	protein AaeX	NA	NA	NA	NA	NA
AXQ80504.1|504725_505658_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
AXQ80505.1|505663_507631_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
AXQ80506.1|507710_507986_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80507.1|508036_508303_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AXQ80508.1|508401_508665_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AXQ80509.1|509040_509511_-	transcriptional regulator ArgR	NA	NA	NA	NA	NA
AXQ80510.1|509925_510864_+	malate dehydrogenase	NA	NA	NA	NA	NA
AXQ80511.1|511000_512059_-|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
AXQ80512.1|512146_513514_-|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.3	6.0e-22
AXQ80513.1|513687_514086_-	DUF1043 family protein	NA	NA	NA	NA	NA
AXQ80514.1|514276_515404_+	cell division protein ZapE	NA	NA	NA	NA	NA
AXQ80515.1|515669_516098_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
AXQ80516.1|516113_516506_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
AXQ80517.1|516615_516819_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ80518.1|516817_517456_+	stringent starvation protein A	NA	NA	NA	NA	NA
AXQ80519.1|517459_517954_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	1.5e-26
>prophage 2
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	1241678	1290822	5421726	plate,capsid,head,lysis,portal,tail,coat,integrase,tRNA,transposase	Salmonella_phage(80.0%)	63	1241093:1241139	1279448:1279494
1241093:1241139	attL	TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AXQ81223.1|1241678_1242659_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
AXQ81224.1|1242704_1243703_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
AXQ81225.1|1243705_1244335_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
AXQ81226.1|1244457_1244700_+	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
AXQ81227.1|1244732_1245242_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
AXQ81228.1|1245249_1245450_+	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
AXQ81229.1|1245413_1245752_+	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
AXQ81230.1|1245819_1246053_+	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
AXQ81231.1|1246052_1246280_+	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
AXQ81232.1|1246276_1247128_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
AXQ81233.1|1247124_1249509_+	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
AXQ81234.1|1249738_1249990_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ81235.1|1249989_1251474_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXQ81236.1|1251581_1251770_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
AXQ81237.1|1251781_1252015_+	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
AXQ81238.1|1252110_1252794_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ81239.1|1252780_1253860_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ81240.1|1253859_1254861_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ85085.1|1255382_1255652_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
AXQ81241.1|1255708_1256752_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
AXQ81242.1|1256751_1258515_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
AXQ81243.1|1258655_1259489_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
AXQ81244.1|1259505_1260558_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
AXQ81245.1|1260561_1261215_+	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
AXQ81246.1|1261310_1261775_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
AXQ81247.1|1261774_1261978_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
AXQ85086.1|1261981_1262197_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
AXQ81248.1|1262177_1262687_+	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
AXQ81249.1|1262691_1263075_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
AXQ81250.1|1263071_1263500_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
AXQ81251.1|1263429_1263633_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	77.6	3.0e-23
AXQ81252.1|1263595_1264018_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
AXQ81253.1|1264010_1264457_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
AXQ81254.1|1264479_1265346_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ81255.1|1265440_1266013_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
AXQ81256.1|1266009_1266372_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
AXQ81257.1|1266358_1267267_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
AXQ85087.1|1267259_1267931_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
AXQ81258.1|1267932_1269882_+|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
AXQ81259.1|1269891_1271010_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
AXQ81260.1|1271061_1272135_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
AXQ81261.1|1272283_1273456_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
AXQ81262.1|1273465_1273981_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
AXQ81263.1|1274033_1274333_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
AXQ81264.1|1274347_1274467_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
AXQ81265.1|1274459_1277090_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
AXQ81266.1|1277086_1277572_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
AXQ81267.1|1277568_1278663_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
AXQ81268.1|1278729_1278948_+	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
AXQ81269.1|1278975_1279353_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ81270.1|1279956_1280439_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
1279448:1279494	attR	TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AXQ81271.1|1280549_1281026_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
AXQ81272.1|1281015_1281306_+	RnfH family protein	NA	NA	NA	NA	NA
AXQ81273.1|1281372_1281714_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AXQ81274.1|1281861_1283523_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AXQ81275.1|1283609_1284488_-	NAD(+) kinase	NA	NA	NA	NA	NA
AXQ81276.1|1284612_1285203_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AXQ81277.1|1285322_1286609_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
AXQ81278.1|1286628_1287420_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AXQ81279.1|1287583_1288948_+	signal recognition particle protein	NA	NA	NA	NA	NA
AXQ81280.1|1289207_1289456_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AXQ81281.1|1289474_1290023_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AXQ81282.1|1290054_1290822_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 3
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	1395538	1448281	5421726	tail,holin,transposase,terminase	Salmonella_phage(40.38%)	63	NA	NA
AXQ81371.1|1395538_1397005_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
AXQ81372.1|1397072_1398650_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA	NA
AXQ81373.1|1398841_1400092_+	DUF4102 domain-containing protein	NA	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
AXQ81374.1|1400034_1400277_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ81375.1|1400273_1400867_-	adenine methylase	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
AXQ81376.1|1400863_1401526_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
AXQ81377.1|1401522_1401681_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
AXQ81378.1|1401673_1401967_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
AXQ81379.1|1402076_1402325_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
AXQ81380.1|1402373_1403255_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
AXQ81381.1|1403251_1404073_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
AXQ81382.1|1404069_1404369_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
AXQ81383.1|1404735_1405317_-	XRE family transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
AXQ81384.1|1405471_1405705_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
AXQ81385.1|1405851_1406061_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
AXQ81386.1|1406060_1406828_+	primosomal protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
AXQ81387.1|1406824_1407610_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
AXQ81388.1|1407729_1408077_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
AXQ81389.1|1408269_1408680_+	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
AXQ81390.1|1408663_1408855_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ81391.1|1408851_1409496_+	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
AXQ85090.1|1409789_1410257_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
AXQ81392.1|1410256_1410550_+	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
AXQ81393.1|1410546_1411167_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
AXQ85092.1|1411166_1411370_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ81394.1|1411362_1411701_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
AXQ81395.1|1411797_1413282_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXQ81396.1|1413281_1413533_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ85091.1|1413685_1413943_+	lF-82	NA	NA	NA	NA	NA
AXQ81397.1|1414020_1414605_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
AXQ81398.1|1414601_1416077_+|terminase	terminase	terminase	Q858H3	Salmonella_phage	93.1	6.4e-280
AXQ81399.1|1416120_1416492_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
AXQ81400.1|1416541_1416784_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ81401.1|1417245_1417452_+	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
AXQ81402.1|1417466_1419149_+|tail	phage tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
AXQ81403.1|1419145_1419442_+	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
AXQ81404.1|1419444_1420125_+	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
AXQ81405.1|1420139_1421126_+	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
AXQ81406.1|1421179_1421617_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
AXQ81407.1|1421627_1421969_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
AXQ81408.1|1422019_1422343_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
AXQ81409.1|1422342_1422948_+	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
AXQ81410.1|1422947_1425425_+	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
AXQ81411.1|1425424_1425889_+	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
AXQ81412.1|1425888_1426428_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
AXQ81413.1|1426438_1428973_+	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
AXQ81414.1|1428972_1430883_+	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
AXQ81415.1|1430882_1433639_+	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
AXQ81416.1|1433635_1433830_+	hypothetical protein	NA	Q858F7	Salmonella_phage	67.2	6.5e-15
AXQ81417.1|1433864_1434017_-	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	2.5e-14
AXQ81418.1|1434115_1434412_-	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
AXQ81419.1|1437239_1437503_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ81420.1|1437543_1438677_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ85093.1|1438665_1438752_+	ABC transporter	NA	NA	NA	NA	NA
AXQ81421.1|1438790_1439771_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AXQ81422.1|1440639_1441902_-|transposase	IS1380 family transposase ISEc9	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
AXQ81423.1|1442792_1442933_-	ABC transporter	NA	NA	NA	NA	NA
AXQ81424.1|1443010_1444327_+	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
AXQ81425.1|1444413_1444818_+	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
AXQ81426.1|1444804_1445110_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
AXQ81427.1|1445099_1445729_+	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
AXQ81428.1|1445725_1446226_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
AXQ81429.1|1446412_1448281_-	phosphatase	NA	A0A2P0VMN7	Tetraselmis_virus	22.7	6.1e-09
>prophage 4
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	1780632	1787537	5421726		Planktothrix_phage(33.33%)	6	NA	NA
AXQ85106.1|1780632_1781496_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	7.4e-10
AXQ81717.1|1781506_1782280_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
AXQ85107.1|1782520_1783414_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
AXQ81718.1|1783659_1785021_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
AXQ81719.1|1785339_1786062_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
AXQ81720.1|1786058_1787537_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.9e-29
>prophage 5
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	1831658	1843333	5421726	transposase	Escherichia_phage(33.33%)	10	NA	NA
AXQ81749.1|1831658_1833065_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	4.7e-38
AXQ81750.1|1833291_1834707_+	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	31.0	1.4e-53
AXQ81751.1|1834728_1836099_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	25.9	6.4e-32
AXQ85110.1|1836253_1837318_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.7	9.8e-105
AXQ81752.1|1837331_1838201_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	66.7	1.7e-110
AXQ81753.1|1838232_1839123_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	2.8e-28
AXQ81754.1|1839137_1839692_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.2	2.9e-52
AXQ81755.1|1839871_1841038_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	9.1e-112
AXQ81756.1|1841400_1842312_+	acyltransferase	NA	NA	NA	NA	NA
AXQ81757.1|1842352_1843333_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
>prophage 6
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	2839360	2850247	5421726		Escherichia_phage(87.5%)	9	NA	NA
AXQ82690.1|2839360_2842468_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
AXQ82691.1|2842522_2843788_+	MFS transporter	NA	NA	NA	NA	NA
AXQ82692.1|2843818_2844907_-	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
AXQ82693.1|2844993_2845254_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
AXQ82694.1|2845551_2846412_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
AXQ82695.1|2846432_2847194_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AXQ82696.1|2847454_2848357_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
AXQ82697.1|2848368_2849634_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
AXQ82698.1|2849626_2850247_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 7
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	3033649	3106346	5421726	plate,head,terminase,lysis,tail,transposase	uncultured_Caudovirales_phage(33.33%)	84	NA	NA
AXQ82869.1|3033649_3034735_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AXQ82870.1|3034698_3036453_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AXQ82871.1|3038124_3041550_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
AXQ82872.1|3041533_3042673_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82873.1|3042669_3042927_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
AXQ82874.1|3042971_3045389_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AXQ82875.1|3045376_3045907_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXQ82876.1|3045974_3046505_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXQ82877.1|3046573_3047104_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXQ82878.1|3047171_3047702_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXQ82879.1|3047770_3048301_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXQ82880.1|3048364_3049144_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXQ82881.1|3049144_3051523_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.8	9.2e-18
AXQ82882.1|3051515_3054170_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.4	2.5e-96
AXQ82883.1|3054434_3054926_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AXQ82884.1|3054930_3056637_-	OmpA family protein	NA	NA	NA	NA	NA
AXQ82885.1|3056633_3057323_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AXQ85160.1|3057319_3058660_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AXQ82886.1|3058672_3060217_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AXQ82887.1|3060259_3060751_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AXQ82888.1|3061220_3062201_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
AXQ82889.1|3062239_3062383_-	ABC transporter	NA	NA	NA	NA	NA
AXQ82890.1|3062796_3063045_+	DinI family protein	NA	S5MQI1	Escherichia_phage	70.4	1.4e-25
AXQ82891.1|3063267_3063552_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82892.1|3063656_3063866_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82893.1|3063862_3064594_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ85161.1|3064604_3065333_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82894.1|3067683_3067881_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82895.1|3067880_3068747_-	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
AXQ82896.1|3068746_3069520_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
AXQ82897.1|3069516_3070713_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
AXQ82898.1|3070712_3071066_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
AXQ82899.1|3071067_3071721_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
AXQ82900.1|3071774_3072341_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82901.1|3072377_3072563_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ82902.1|3072615_3072957_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
AXQ82903.1|3072956_3073979_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
AXQ82904.1|3073981_3074284_-	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
AXQ82905.1|3074284_3074884_-	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
AXQ82906.1|3074883_3076887_-	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
AXQ82907.1|3076876_3077029_-	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
AXQ82908.1|3077064_3077490_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
AXQ82909.1|3077493_3077934_-	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
AXQ82910.1|3077944_3079090_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
AXQ82911.1|3079093_3079534_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
AXQ82912.1|3079628_3080015_-|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
AXQ82913.1|3080014_3080521_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82914.1|3080517_3080937_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
AXQ82915.1|3080905_3081187_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82916.1|3081226_3082168_-	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
AXQ82917.1|3082179_3082674_-	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
AXQ82918.1|3082677_3083880_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
AXQ85162.1|3083931_3084480_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
AXQ82919.1|3084535_3085987_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
AXQ82920.1|3086224_3087625_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
AXQ82921.1|3087575_3088328_-	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
AXQ82922.1|3088429_3088750_-	negative regulator GrlR	NA	NA	NA	NA	NA
AXQ82923.1|3088984_3089374_-	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
AXQ82924.1|3089370_3089901_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
AXQ82925.1|3089903_3090152_-|lysis	lysis protein	lysis	NA	NA	NA	NA
AXQ82926.1|3090557_3091340_-	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
AXQ82927.1|3091336_3091813_-	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
AXQ82928.1|3091809_3092772_-	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
AXQ82929.1|3092773_3094432_-	ATP-dependent helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
AXQ82930.1|3094740_3095034_-	hypothetical protein	NA	A0A286S2B5	Klebsiella_phage	97.6	2.8e-38
AXQ82931.1|3095008_3095230_-	XRE family transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
AXQ82932.1|3095327_3095996_+	LexA family transcriptional regulator	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
AXQ82933.1|3096166_3096481_+	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
AXQ82934.1|3096473_3096662_+	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
AXQ82935.1|3096831_3097197_+	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	99.2	6.9e-58
AXQ82936.1|3097189_3097444_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
AXQ82937.1|3097630_3098056_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
AXQ82938.1|3098052_3098247_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ82939.1|3098243_3099071_+	SPFH/Band 7/PHB domain protein	NA	Q8W654	Enterobacteria_phage	84.0	5.5e-111
AXQ82940.1|3099175_3099694_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
AXQ82941.1|3099699_3100410_+	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
AXQ82942.1|3100399_3100624_+	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
AXQ82943.1|3100620_3100833_+	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
AXQ82944.1|3100829_3101309_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ82945.1|3101487_3101730_+	AlpA family transcriptional regulator	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
AXQ82946.1|3101710_3102892_-	DUF4102 domain-containing protein	NA	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
AXQ82947.1|3103088_3103637_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
AXQ82948.1|3103835_3105368_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
AXQ82949.1|3105584_3106346_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
>prophage 8
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	3139279	3170158	5421726	integrase,holin,transposase	Enterobacteria_phage(38.71%)	41	3139061:3139076	3167464:3167479
3139061:3139076	attL	TATGCCCTACGATAGC	NA	NA	NA	NA
AXQ82980.1|3139279_3139951_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
AXQ85165.1|3140137_3140965_+	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
AXQ82981.1|3141040_3142306_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
AXQ82982.1|3142307_3142727_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
AXQ82983.1|3142806_3144291_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXQ82984.1|3144290_3144542_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82985.1|3145188_3145611_-	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
AXQ82986.1|3146203_3146908_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ82987.1|3147523_3147871_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AXQ85166.1|3148034_3148826_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AXQ82988.1|3149807_3150512_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ82989.1|3150667_3151207_-	hypothetical protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
AXQ82990.1|3151203_3151515_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	3.8e-49
AXQ85167.1|3152152_3152842_-	antiterminator	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
AXQ82991.1|3152841_3152982_-	YlcG family protein	NA	NA	NA	NA	NA
AXQ82992.1|3152978_3153617_-	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
AXQ82993.1|3153609_3154278_-	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
AXQ82994.1|3154274_3154442_-	NinE family protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
AXQ82995.1|3154422_3154890_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
AXQ82996.1|3155410_3156439_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ82997.1|3156646_3156892_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ82998.1|3156947_3157250_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXQ82999.1|3157246_3158095_-	AAA family ATPase	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
AXQ83000.1|3158091_3158952_-	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
AXQ83001.1|3159037_3159259_-	transcriptional regulator	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
AXQ83002.1|3159299_3159527_-	transcriptional regulator	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
AXQ83003.1|3159638_3160337_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
AXQ83004.1|3160359_3160479_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83005.1|3160624_3161701_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
AXQ83006.1|3161782_3161986_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
AXQ83007.1|3162414_3162609_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83008.1|3162697_3162982_+	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
AXQ83009.1|3162997_3163843_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
AXQ83010.1|3164128_3164809_+	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
AXQ83011.1|3164805_3165234_+	regulator	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
AXQ83012.1|3165230_3165893_+	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
AXQ83013.1|3165889_3166204_+	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
AXQ85168.1|3166100_3167288_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	1.1e-120
AXQ83014.1|3167464_3168355_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
3167464:3167479	attR	TATGCCCTACGATAGC	NA	NA	NA	NA
AXQ83015.1|3168354_3169347_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
AXQ83016.1|3169348_3170158_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
>prophage 9
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	3423604	3479763	5421726	plate,capsid,terminase,portal,tail,integrase,protease	Enterobacteria_phage(40.0%)	63	3421764:3421784	3456288:3456308
3421764:3421784	attL	AACCCGGAGTGCTCCGGGTTT	NA	NA	NA	NA
AXQ83255.1|3423604_3424759_-	phage late control D family protein	NA	B9A7A9	Serratia_phage	77.2	6.6e-171
AXQ83256.1|3424910_3426092_+|tail	phage tail protein	tail	A0A0A7NV69	Enterobacteria_phage	69.4	8.0e-156
AXQ83257.1|3426092_3426608_+|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	70.0	2.6e-63
AXQ83258.1|3426659_3426959_+|tail	phage tail assembly protein	tail	B9A7B2	Serratia_phage	72.7	2.9e-30
AXQ83259.1|3426979_3427132_+|tail	GpE family phage tail protein	tail	O80316	Escherichia_phage	71.4	1.5e-11
AXQ83260.1|3427121_3429857_+|tail	phage tail tape measure protein	tail	B9A7B3	Serratia_phage	80.6	2.0e-242
AXQ83261.1|3429868_3430357_+|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	59.9	2.9e-51
AXQ83262.1|3430454_3431531_-|tail	phage tail protein	tail	Q37842	Escherichia_phage	48.3	2.3e-32
AXQ83263.1|3431542_3432286_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83264.1|3432291_3434556_-	hypothetical protein	NA	B5TAB2	Burkholderia_phage	39.7	5.7e-102
AXQ83265.1|3434557_3435160_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	44.8	1.8e-42
AXQ83266.1|3435152_3436052_-|plate	baseplate assembly protein	plate	A0A0A7NPY5	Enterobacteria_phage	62.2	6.2e-92
AXQ83267.1|3436038_3436407_-|plate	baseplate assembly protein	plate	A0A0A7NQ90	Enterobacteria_phage	57.4	2.3e-29
AXQ83268.1|3436403_3436988_-|plate	phage baseplate assembly protein V	plate	A0A0A7NRZ3	Enterobacteria_phage	61.4	8.7e-63
AXQ83269.1|3436987_3437629_-	phage virion morphogenesis protein	NA	A0A0M4RCU1	Salmonella_phage	49.8	1.4e-45
AXQ83270.1|3437625_3438084_-|tail	phage tail protein	tail	A0A0A7NPU6	Enterobacteria_phage	46.8	3.1e-31
AXQ83271.1|3438080_3438344_-	peptidase	NA	NA	NA	NA	NA
AXQ83272.1|3438228_3438624_-	DUF2570 domain-containing protein	NA	NA	NA	NA	NA
AXQ83273.1|3438620_3439172_-	lysozyme	NA	Q1I0Z1	Pasteurella_virus	42.5	6.8e-33
AXQ83274.1|3439168_3439450_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83275.1|3439440_3439641_-|tail	phage tail protein	tail	A0A0A7NV57	Enterobacteria_phage	64.6	3.0e-15
AXQ83276.1|3439640_3440138_-|capsid	capsid assembly protein	capsid	B9A7B7	Serratia_phage	69.7	2.2e-59
AXQ83277.1|3440240_3441101_-|terminase	terminase	terminase	B9A7B6	Serratia_phage	68.4	1.0e-83
AXQ83278.1|3441147_3442197_-|capsid	phage major capsid protein, P2 family	capsid	A0A0M3ULA3	Salmonella_phage	53.9	2.3e-106
AXQ83279.1|3442220_3443054_-|capsid	phage capsid protein	capsid	A0A0A7NRY7	Enterobacteria_phage	65.3	6.5e-96
AXQ83280.1|3443214_3444936_+	oxidoreductase	NA	A0A0A7NV54	Enterobacteria_phage	66.5	4.3e-227
AXQ83281.1|3444956_3445991_+|portal	phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	68.6	2.0e-139
AXQ85182.1|3446398_3446713_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83282.1|3446985_3447393_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83283.1|3447564_3450159_-	replication endonuclease	NA	A0A0M4RTM8	Salmonella_phage	51.7	1.1e-192
AXQ83284.1|3450151_3451168_-	DNA cytosine methyltransferase	NA	Q6J1P4	Burkholderia_virus	54.8	2.4e-92
AXQ83285.1|3451469_3452438_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A0M4QWR0	Salmonella_phage	49.1	3.1e-73
AXQ83286.1|3452446_3453025_-	3'-5' exoribonuclease	NA	A0A192Y6E0	Salmonella_phage	39.5	2.7e-32
AXQ83287.1|3453021_3453246_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83288.1|3453313_3453586_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83289.1|3453601_3453988_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ85183.1|3454004_3454202_-	DUF4761 domain-containing protein	NA	NA	NA	NA	NA
AXQ83290.1|3454393_3454726_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83291.1|3454820_3455123_+	XRE family transcriptional regulator	NA	Q1JS63	Enterobacteria_phage	61.0	2.6e-26
AXQ83292.1|3455210_3456218_+|integrase	integrase	integrase	A0A0M4RTQ0	Salmonella_phage	52.1	7.6e-99
AXQ83293.1|3456314_3457562_-	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA	NA
3456288:3456308	attR	AACCCGGAGTGCTCCGGGTTT	NA	NA	NA	NA
AXQ83294.1|3457714_3458164_+	transcriptional regulator	NA	NA	NA	NA	NA
AXQ83295.1|3458279_3459068_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXQ83296.1|3459088_3459310_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83297.1|3459566_3459689_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83298.1|3459807_3461199_-	APC family permease	NA	NA	NA	NA	NA
AXQ83299.1|3461188_3461380_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83300.1|3461552_3462974_-	glutamine synthetase	NA	NA	NA	NA	NA
AXQ83301.1|3463187_3463952_+	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA	NA
AXQ83302.1|3463977_3464535_+	HTH-type transcriptional regulator PuuR	NA	NA	NA	NA	NA
AXQ83303.1|3464855_3466343_+	aldehyde dehydrogenase PuuC	NA	NA	NA	NA	NA
AXQ83304.1|3466345_3467626_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AXQ83305.1|3467622_3468564_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXQ83306.1|3468667_3469753_+	tartrate dehydrogenase	NA	NA	NA	NA	NA
AXQ83307.1|3470257_3471865_+	BCCT family transporter	NA	NA	NA	NA	NA
AXQ83308.1|3471901_3473026_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AXQ83309.1|3473044_3474493_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXQ83310.1|3474550_3475516_+	oxidoreductase	NA	NA	NA	NA	NA
AXQ83311.1|3475685_3475874_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83312.1|3475938_3476226_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83313.1|3476204_3476825_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AXQ83314.1|3477181_3478834_-	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA	NA
AXQ83315.1|3479103_3479763_+|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	46.6	3.2e-37
>prophage 10
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	3564532	3660593	5421726	plate,capsid,head,lysis,portal,tail,protease,integrase,tRNA,transposase	Salmonella_phage(55.0%)	101	3620058:3620076	3660668:3660686
AXQ83385.1|3564532_3565825_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	7.3e-94
AXQ83386.1|3565915_3567259_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	7.3e-81
AXQ83387.1|3567267_3567879_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AXQ83388.1|3568001_3572255_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.2	5.2e-88
AXQ83389.1|3572390_3572885_-	leucine-responsive regulatory protein	NA	NA	NA	NA	NA
AXQ83390.1|3573390_3574386_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.0	3.3e-62
AXQ83391.1|3574500_3576267_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	25.9	2.3e-21
AXQ83392.1|3576267_3577989_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
AXQ83393.1|3578033_3578735_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AXQ83394.1|3579088_3579307_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AXQ83395.1|3579427_3581707_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
AXQ83396.1|3581737_3582055_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
AXQ83397.1|3582380_3582602_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
AXQ83398.1|3582556_3582739_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83399.1|3582678_3584619_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
AXQ83400.1|3584615_3585731_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
AXQ83401.1|3585877_3587536_-	DUF2813 domain-containing protein	NA	NA	NA	NA	NA
AXQ83402.1|3587955_3588651_+	aquaporin Z	NA	NA	NA	NA	NA
AXQ83403.1|3588766_3589666_+	lysine exporter LysO family protein	NA	NA	NA	NA	NA
AXQ85188.1|3589809_3591462_+	hydroxylamine reductase	NA	NA	NA	NA	NA
AXQ83404.1|3591472_3592441_+	NADH oxidoreductase	NA	NA	NA	NA	NA
AXQ83405.1|3592391_3592595_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83406.1|3592652_3593087_-	DoxX family protein	NA	NA	NA	NA	NA
AXQ85189.1|3593238_3594957_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
AXQ83407.1|3594995_3595997_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
AXQ83408.1|3596007_3597450_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXQ83409.1|3597537_3598551_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXQ83410.1|3598547_3599378_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	31.6	4.1e-05
AXQ83411.1|3599409_3600549_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXQ83412.1|3600601_3600781_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83413.1|3601426_3601942_+	lipoprotein	NA	NA	NA	NA	NA
AXQ83414.1|3602168_3602897_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	37.1	1.2e-29
AXQ85190.1|3602917_3603649_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXQ83415.1|3603655_3604372_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
AXQ83416.1|3604371_3605040_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
AXQ83417.1|3605223_3605955_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXQ83418.1|3605997_3607470_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.8	7.9e-28
AXQ83419.1|3607466_3608183_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.9	2.1e-34
AXQ83420.1|3608261_3609389_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A2K5B251	Erysipelothrix_phage	25.6	1.3e-19
AXQ83421.1|3609430_3609919_-	DUF2593 family protein	NA	NA	NA	NA	NA
AXQ83422.1|3609976_3610822_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AXQ83423.1|3610818_3611772_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
AXQ85191.1|3611782_3612916_-	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.9	2.2e-30
AXQ83424.1|3613079_3614192_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
AXQ83425.1|3614540_3615020_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
AXQ83426.1|3615108_3616011_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	35.3	2.0e-34
AXQ83427.1|3616832_3617120_-	DUF1418 family protein	NA	NA	NA	NA	NA
AXQ83428.1|3617322_3617586_+	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	73.1	1.6e-27
AXQ83429.1|3617592_3617976_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ85192.1|3618242_3619928_+	transporter	NA	NA	NA	NA	NA
3620058:3620076	attL	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
AXQ83430.1|3620147_3620366_-	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AXQ83431.1|3620457_3621558_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
AXQ83432.1|3621554_3622040_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
AXQ83433.1|3622036_3624664_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
AXQ83434.1|3624656_3624776_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
AXQ83435.1|3624790_3625090_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
AXQ83436.1|3625142_3625658_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
AXQ83437.1|3625667_3626840_-|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
AXQ83438.1|3626978_3628055_-|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
AXQ83439.1|3628084_3628288_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83440.1|3628284_3629016_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83441.1|3629019_3631971_-	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
AXQ85193.1|3631972_3632572_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
AXQ83442.1|3632564_3633473_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
AXQ83443.1|3633459_3633822_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
AXQ83444.1|3633818_3634391_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
AXQ85194.1|3634574_3634712_+	ABC transporter	NA	NA	NA	NA	NA
AXQ83445.1|3634750_3635731_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AXQ83446.1|3635868_3636378_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83447.1|3636374_3636821_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
AXQ83448.1|3636813_3637245_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
AXQ83449.1|3637340_3637769_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
AXQ83450.1|3637765_3638149_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
AXQ83451.1|3638153_3638663_-	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
AXQ83452.1|3638643_3638859_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
AXQ83453.1|3638862_3639066_-|tail	phage tail protein	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
AXQ83454.1|3639065_3639530_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
AXQ83455.1|3639625_3640276_-	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
AXQ83456.1|3640279_3641338_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
AXQ83457.1|3641354_3642188_-|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
AXQ83458.1|3642330_3644097_+	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
AXQ83459.1|3644096_3645122_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
AXQ83460.1|3645183_3646926_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83461.1|3647201_3647879_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83462.1|3647993_3648299_-	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
AXQ85195.1|3648237_3648426_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
AXQ83463.1|3648526_3650011_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXQ83464.1|3650010_3650262_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83465.1|3650489_3652904_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AXQ83466.1|3652900_3653758_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
AXQ83467.1|3653754_3653982_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
AXQ83468.1|3653981_3654215_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
AXQ83469.1|3654282_3654624_-	hypothetical protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
AXQ83470.1|3654587_3654788_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
AXQ83471.1|3654795_3655305_-	hypothetical protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AXQ83472.1|3655337_3655559_-	regulator	NA	NA	NA	NA	NA
AXQ85196.1|3655704_3656583_+	Repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
AXQ83473.1|3656594_3657539_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ83474.1|3657637_3659122_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXQ83475.1|3659121_3659373_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ83476.1|3659540_3660593_+|integrase	site-specific integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
3660668:3660686	attR	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
>prophage 11
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	4312376	4324029	5421726		Enterobacteria_phage(70.0%)	13	NA	NA
AXQ84062.1|4312376_4313480_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
AXQ84063.1|4313490_4314744_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
AXQ84064.1|4315096_4316287_+	DUF4102 domain-containing protein	NA	Q7M297	Enterobacteria_phage	62.7	6.4e-145
AXQ84065.1|4316274_4317225_+	cobyrinic acid a,c-diamide synthase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
AXQ84066.1|4317224_4317650_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ84067.1|4318217_4318784_-	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
AXQ84068.1|4318801_4319047_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
AXQ84069.1|4319043_4319781_-	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
AXQ84070.1|4320322_4320589_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
AXQ84071.1|4320585_4321143_+	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
AXQ84072.1|4321139_4321367_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ84073.1|4321363_4321684_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ84074.1|4321695_4324029_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
>prophage 12
CP031721	Klebsiella pneumoniae strain WCHKP3 chromosome, complete genome	5421726	4792266	4801791	5421726	transposase	Enterobacteria_phage(83.33%)	10	NA	NA
AXQ84480.1|4792266_4794600_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.9	0.0e+00
AXQ84481.1|4794614_4794935_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ84482.1|4794931_4795159_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ84483.1|4795155_4795704_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	69.4	1.1e-30
AXQ84484.1|4796527_4797265_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.1e-70
AXQ84485.1|4797261_4797507_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
AXQ84486.1|4797524_4798091_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
AXQ84487.1|4798831_4799911_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ84488.1|4799911_4800448_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ84489.1|4800810_4801791_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 1
CP031720	Klebsiella pneumoniae strain WCHKP3 plasmid pKPC2_020003, complete sequence	154957	6290	20096	154957	transposase	Enterobacteria_phage(18.18%)	18	NA	NA
AXQ79845.1|6290_6551_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	46.2	4.1e-12
AXQ79846.1|6737_6929_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79847.1|6971_7478_-	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
AXQ79848.1|7882_8662_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79849.1|8715_9135_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AXQ79850.1|9145_9367_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79851.1|9366_10044_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
AXQ79852.1|10402_11074_+	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
AXQ79853.1|11253_11676_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
AXQ79854.1|11675_12947_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
AXQ79855.1|13082_14054_-	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
AXQ79856.1|14050_15256_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
AXQ79857.1|15618_16251_+	LacI family DNA-binding transcriptional regulator	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
AXQ79858.1|16304_16505_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79859.1|16651_17602_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
AXQ79860.1|17598_18210_-	DUF2913 family protein	NA	NA	NA	NA	NA
AXQ80014.1|18206_18602_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79861.1|19115_20096_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 2
CP031720	Klebsiella pneumoniae strain WCHKP3 plasmid pKPC2_020003, complete sequence	154957	42597	130735	154957	transposase,protease,integrase	Escherichia_phage(40.62%)	103	79419:79433	119312:119326
AXQ79880.1|42597_43521_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	2.2e-177
AXQ79881.1|43587_43860_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79882.1|43922_44231_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79883.1|44257_45250_-	conjugal transfer protein TraU	NA	NA	NA	NA	NA
AXQ79884.1|45246_45993_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
AXQ79885.1|45875_46262_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA	NA
AXQ79886.1|46258_48886_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
AXQ79887.1|49045_49267_-	protein TraR	NA	A2I309	Vibrio_virus	39.4	4.4e-07
AXQ79888.1|49401_49917_-	type IV conjugative transfer system protein TraV	NA	NA	NA	NA	NA
AXQ79889.1|49913_50165_-	conjugal transfer protein TrbG	NA	NA	NA	NA	NA
AXQ79890.1|50176_50407_-	DUF2689 domain-containing protein	NA	NA	NA	NA	NA
AXQ79891.1|50360_50951_-	conjugal transfer protein TraP	NA	NA	NA	NA	NA
AXQ79892.1|50940_52368_-	conjugal transfer protein TraB	NA	NA	NA	NA	NA
AXQ80016.1|52367_53039_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
AXQ79893.1|53082_53649_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA	NA
AXQ79894.1|53670_53982_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
AXQ79895.1|53996_54362_-	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA	NA
AXQ79896.1|54395_54623_-	relaxosome protein TraY	NA	NA	NA	NA	NA
AXQ79897.1|54716_55463_-	PAS domain-containing protein	NA	NA	NA	NA	NA
AXQ79898.1|55593_55977_-	conjugal transfer protein TraM	NA	NA	NA	NA	NA
AXQ79899.1|56253_56901_+	lytic transglycosylase	NA	NA	NA	NA	NA
AXQ79900.1|57197_58049_-	DUF945 domain-containing protein	NA	A0A2C9CYF8	Yersinia_phage	38.2	3.5e-44
AXQ79901.1|58129_58426_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79902.1|58488_58725_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79903.1|58899_59118_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79904.1|59778_60498_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
AXQ79905.1|60494_60929_-	protein PsiB	NA	NA	NA	NA	NA
AXQ79906.1|63081_63315_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
AXQ79907.1|63372_63939_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	74.4	8.5e-47
AXQ79908.1|63964_64201_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79909.1|64201_64663_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79910.1|64643_64838_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79911.1|64748_65312_-	class I SAM-dependent methyltransferase	NA	A8HNV9	Thalassomonas_phage	37.3	6.1e-21
AXQ79912.1|65358_66720_-	DUF3560 domain-containing protein	NA	NA	NA	NA	NA
AXQ79913.1|66771_67002_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79914.1|67264_67522_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79915.1|68401_70069_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	53.3	1.7e-164
AXQ79916.1|70382_70574_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79917.1|70570_70993_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AXQ79918.1|71039_71465_-	antirestriction protein	NA	NA	NA	NA	NA
AXQ79919.1|71437_72010_-	DUF1472 domain-containing protein	NA	NA	NA	NA	NA
AXQ79920.1|72709_73144_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AXQ79921.1|73157_73379_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79922.1|73379_74063_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	37.4	5.6e-29
AXQ80017.1|74139_74433_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79923.1|74579_75542_+	plasmid segregation protein ParM	NA	A0A222YXF2	Escherichia_phage	53.9	4.1e-94
AXQ80018.1|75544_75895_+	protein stbB	NA	NA	NA	NA	NA
AXQ80019.1|76017_76299_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79924.1|78109_78250_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79925.1|78240_78945_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ79926.1|79394_80150_-	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
79419:79433	attL	TATAAGTTCTGTTCC	NA	NA	NA	NA
AXQ79927.1|80319_81180_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
AXQ80020.1|81362_81899_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	2.8e-84
AXQ79928.1|81990_82179_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79929.1|82856_83561_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ79930.1|84671_85376_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ79931.1|87126_88050_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	2.2e-177
AXQ79932.1|88129_89005_-	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
AXQ79933.1|89515_90220_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ79934.1|90259_90733_+	resolvase	NA	Q1MVP4	Enterobacteria_phage	99.3	3.3e-76
AXQ79935.1|90855_91836_+|transposase	IS481-like element ISKpn27 family transposase	transposase	A8RHK4	Spiroplasma_virus	27.4	2.9e-10
AXQ79936.1|92111_92993_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.2e-73
AXQ79937.1|94261_94966_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ79938.1|96175_96280_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79939.1|96276_96741_-	mRNA interferase PemK	NA	NA	NA	NA	NA
AXQ79940.1|96960_97614_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AXQ79941.1|97803_98190_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79942.1|98552_99422_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
AXQ80021.1|99402_99477_-	RepA leader peptide Tap	NA	NA	NA	NA	NA
AXQ79943.1|99511_99721_+	replication protein RepA	NA	NA	NA	NA	NA
AXQ79944.1|99721_99970_-	replication regulatory protein RepA	NA	NA	NA	NA	NA
AXQ79945.1|100253_100403_-	Hok/Gef family protein	NA	NA	NA	NA	NA
AXQ79946.1|100707_100938_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79947.1|101101_101701_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79948.1|102086_102287_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79949.1|102418_102979_-	fertility inhibition protein FinO	NA	NA	NA	NA	NA
AXQ79950.1|103033_103780_-	type-F conjugative transfer system pilin acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	30.9	4.2e-09
AXQ79951.1|104024_104729_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXQ79952.1|104849_107816_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	72.8	0.0e+00
AXQ79953.1|107894_108899_+|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
AXQ79954.1|110432_111455_-	DNA helicase UvrD	NA	NA	NA	NA	NA
AXQ79955.1|111439_113002_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AXQ79956.1|113075_113492_-	PIN domain-containing protein	NA	NA	NA	NA	NA
AXQ79957.1|113488_113719_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AXQ79958.1|113702_114137_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79959.1|114297_115242_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ80022.1|115320_115671_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79960.1|115728_116250_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79961.1|116295_116499_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79962.1|116528_117533_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79963.1|117716_118496_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.0	5.4e-52
AXQ79964.1|118541_118799_-	hypothetical protein	NA	NA	NA	NA	NA
AXQ79965.1|119576_120443_+	RepB family plasmid replication initiator protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
119312:119326	attR	GGAACAGAACTTATA	NA	NA	NA	NA
AXQ79966.1|121552_122758_+	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
AXQ79967.1|122754_123732_+	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	53.8	1.4e-86
AXQ79968.1|123813_125085_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
AXQ79969.1|125084_125516_-	peptidase	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
AXQ79970.1|125674_125926_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79971.1|125925_127410_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXQ79972.1|127658_128630_+	StbA family protein	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
AXQ79973.1|128632_129304_+	Mediator of plasmid stability	NA	NA	NA	NA	NA
AXQ79974.1|129366_129597_+	hypothetical protein	NA	NA	NA	NA	NA
AXQ79975.1|130033_130735_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
