assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	1	619513-619652	1	CRISPRCasFinder	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	TTTGTATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA	49	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|336aa|up_9|CP034966.1_611978_612986_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|293aa|up_8|CP034966.1_613191_614070_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|up_7|CP034966.1_614078_615074_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|175aa|up_6|CP034966.1_615282_615807_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|up_5|CP034966.1_615800_616304_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|101aa|up_4|CP034966.1_616290_616593_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|148aa|up_3|CP034966.1_616643_617087_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|173aa|up_2|CP034966.1_617066_617585_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|212aa|up_1|CP034966.1_617712_618348_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|347aa|up_0|CP034966.1_618420_619461_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|192aa|down_0|CP034966.1_619665_620241_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|down_1|CP034966.1_620250_620841_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|132aa|down_2|CP034966.1_620860_621256_-	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein	NA|679aa|down_3|CP034966.1_621213_623250_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|287aa|down_4|CP034966.1_623314_624175_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|364aa|down_5|CP034966.1_624217_625309_-	pfam00419, Fimbrial, Fimbrial protein	NA|791aa|down_6|CP034966.1_625319_627692_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|232aa|down_7|CP034966.1_628642_629338_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|195aa|down_8|CP034966.1_629417_630002_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|252aa|down_9|CP034966.1_630402_631158_-	PRK09762, PRK09762, galactosamine-6-phosphate isomerase; Provisional
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	2	649468-649719	1	PILER-CR	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	TTTTGGAGGAGCAGAAAGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA	54	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|180aa|down_1|CP034966.1_651226_651766_-	NA|158aa|up_9|CP034966.1_639042_639516_-	PRK11425, PRK11425, PTS N-acetylgalactosamine transporter subunit IIB	NA|427aa|up_8|CP034966.1_639538_640819_-	PRK15458, PRK15458, tagatose 6-phosphate aldolase subunit KbaZ; Provisional	NA|270aa|up_7|CP034966.1_641067_641877_+	PRK09802, PRK09802, DeoR family transcriptional regulator	NA|155aa|up_6|CP034966.1_641931_642396_-	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system	NA|112aa|up_5|CP034966.1_642395_642731_-	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin	NA|524aa|up_4|CP034966.1_642879_644451_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|CP034966.1_644825_646160_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|CP034966.1_646175_646946_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|CP034966.1_646975_647866_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|CP034966.1_647962_649108_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|396aa|down_0|CP034966.1_650017_651205_-	PRK09716, PRK09716, YhaC family protein	NA|180aa|down_1|CP034966.1_651226_651766_-	NA	NA|115aa|down_2|CP034966.1_652021_652366_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|down_3|CP034966.1_652554_653493_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_4|CP034966.1_653591_654581_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_5|CP034966.1_654602_655934_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_6|CP034966.1_655959_657168_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_7|CP034966.1_657201_659496_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_8|CP034966.1_659509_659899_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|down_9|CP034966.1_659970_661335_+	PRK15040, PRK15040, L-serine ammonia-lyase
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	3	664300-664417	2	CRISPRCasFinder	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|55aa|down_0|CP034966.1_664490_664655_-	NA|115aa|up_9|CP034966.1_652021_652366_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|CP034966.1_652554_653493_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|CP034966.1_653591_654581_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|CP034966.1_654602_655934_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|CP034966.1_655959_657168_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|CP034966.1_657201_659496_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|CP034966.1_659509_659899_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|CP034966.1_659970_661335_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|CP034966.1_661609_662941_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|CP034966.1_662968_664279_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|CP034966.1_664490_664655_-	NA	NA|234aa|down_1|CP034966.1_664677_665379_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|CP034966.1_665483_666380_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|CP034966.1_666430_666787_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|CP034966.1_667028_667394_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|CP034966.1_667686_668673_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|CP034966.1_668742_669225_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|CP034966.1_669320_669620_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|CP034966.1_669609_670014_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|CP034966.1_670016_670322_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	4	1037750-1038266	2,3,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|47aa|up_1|CP034966.1_1036459_1036600_-,NA	NA|434aa|up_9|CP034966.1_1027156_1028458_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|CP034966.1_1028505_1030740_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|CP034966.1_1030817_1031066_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|CP034966.1_1031065_1031401_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|CP034966.1_1031471_1032263_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|CP034966.1_1032490_1034128_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|CP034966.1_1034215_1035514_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|CP034966.1_1035573_1036446_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|CP034966.1_1036459_1036600_-	NA	NA|224aa|up_0|CP034966.1_1036738_1037410_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|CP034966.1_1038903_1040382_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|CP034966.1_1040408_1041686_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|CP034966.1_1042004_1042790_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|CP034966.1_1042859_1044314_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|CP034966.1_1044407_1045745_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|CP034966.1_1045722_1046502_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|CP034966.1_1046498_1047359_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|CP034966.1_1047506_1048082_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|CP034966.1_1048098_1048359_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|CP034966.1_1048349_1049621_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	5	1060651-1061229	4,3,2	CRISPRCasFinder,PILER-CR,CRT	no	cas5,cas6e,cas1,cas2	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Unclear	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,28,29	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	Unclear	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|424aa|up_9|CP034966.1_1048349_1049621_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_8|CP034966.1_1049698_1050064_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_7|CP034966.1_1050379_1052179_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_6|CP034966.1_1052178_1053891_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_5|CP034966.1_1053964_1054699_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_4|CP034966.1_1054963_1055116_+	pfam01848, HOK_GEF, Hok/gef family	cas5|249aa|up_3|CP034966.1_1057966_1058713_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|CP034966.1_1058694_1059345_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|CP034966.1_1059341_1060265_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP034966.1_1060261_1060555_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|CP034966.1_1061310_1062348_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP034966.1_1062599_1063508_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|CP034966.1_1063509_1064937_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP034966.1_1064936_1065542_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|CP034966.1_1065591_1065915_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP034966.1_1066108_1066420_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP034966.1_1066438_1067149_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP034966.1_1067148_1067628_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP034966.1_1067624_1068674_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP034966.1_1068654_1069416_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	6	1562277-1562394	5	CRISPRCasFinder	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|105aa|up_3|CP034966.1_1557357_1557672_-,NA	NA|300aa|up_9|CP034966.1_1549270_1550170_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|CP034966.1_1550362_1551553_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|CP034966.1_1551549_1552809_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|CP034966.1_1552798_1554427_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|CP034966.1_1554699_1556058_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|CP034966.1_1556062_1557139_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|105aa|up_3|CP034966.1_1557357_1557672_-	NA	NA|217aa|up_2|CP034966.1_1560091_1560742_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|CP034966.1_1560795_1561050_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|CP034966.1_1561049_1562180_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|CP034966.1_1562413_1564699_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|CP034966.1_1565394_1569147_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|CP034966.1_1569274_1569997_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|CP034966.1_1570143_1572771_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|CP034966.1_1572919_1574608_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|CP034966.1_1574604_1575228_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|CP034966.1_1575371_1579766_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|CP034966.1_1579766_1581416_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|CP034966.1_1581420_1582197_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|CP034966.1_1582270_1583455_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	7	2156781-2156904	6	CRISPRCasFinder	no	DEDDh	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|30aa|down_7|CP034966.1_2165800_2165890_+	NA|471aa|up_9|CP034966.1_2146235_2147648_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|CP034966.1_2148203_2148413_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|CP034966.1_2148868_2149495_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|CP034966.1_2149515_2151618_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|CP034966.1_2151621_2152269_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|CP034966.1_2152332_2153001_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|CP034966.1_2152997_2153783_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|CP034966.1_2153786_2154599_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|CP034966.1_2154610_2156215_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|CP034966.1_2156340_2156646_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|CP034966.1_2157218_2158475_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|CP034966.1_2158515_2159889_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|CP034966.1_2160103_2160745_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|CP034966.1_2160784_2161933_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|CP034966.1_2162223_2163435_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|CP034966.1_2163547_2164480_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|CP034966.1_2164476_2165502_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|CP034966.1_2165800_2165890_+	NA	NA|390aa|down_8|CP034966.1_2166055_2167225_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|CP034966.1_2167370_2167952_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	10	3128945-3129089	8	CRISPRCasFinder	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|94aa|up_7|CP034966.1_3124330_3124612_+,NA|201aa|up_5|CP034966.1_3125142_3125745_-,NA|62aa|up_4|CP034966.1_3125869_3126055_-,NA|56aa|up_3|CP034966.1_3125987_3126155_+,NA	NA|61aa|up_9|CP034966.1_3123973_3124156_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|64aa|up_8|CP034966.1_3124128_3124320_+	pfam07131, DUF1382, Protein of unknown function (DUF1382)	NA|94aa|up_7|CP034966.1_3124330_3124612_+	NA	NA|74aa|up_6|CP034966.1_3124710_3124932_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|201aa|up_5|CP034966.1_3125142_3125745_-	NA	NA|62aa|up_4|CP034966.1_3125869_3126055_-	NA	NA|56aa|up_3|CP034966.1_3125987_3126155_+	NA	NA|73aa|up_2|CP034966.1_3126194_3126413_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|CP034966.1_3126390_3127461_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|CP034966.1_3127595_3128879_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|CP034966.1_3129112_3131374_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|CP034966.1_3131556_3132990_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|CP034966.1_3133065_3134118_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|CP034966.1_3134301_3135255_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|CP034966.1_3135295_3136291_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|CP034966.1_3136445_3137264_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|CP034966.1_3137264_3138323_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|CP034966.1_3138325_3139015_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|CP034966.1_3139014_3139788_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|CP034966.1_3139954_3140104_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	11	3648788-3648941	9	CRISPRCasFinder	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	CGCCTTATCCGGCCTACCGATCCAGCACAGGTTTGTAGGCATGATAAGACGCG	53	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|150aa|down_8|CP034966.1_3658518_3658968_-	NA|352aa|up_9|CP034966.1_3638613_3639669_+	PRK10159, PRK10159, phosphoporin PhoE	NA|134aa|up_8|CP034966.1_3639707_3640109_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_7|CP034966.1_3640166_3641411_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_6|CP034966.1_3641502_3641961_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_5|CP034966.1_3642221_3643679_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|89aa|up_4|CP034966.1_3644035_3644302_-	PRK09588, PRK09588, hypothetical protein; Reviewed	NA|151aa|up_3|CP034966.1_3644608_3645061_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_2|CP034966.1_3645057_3646113_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|257aa|up_1|CP034966.1_3646183_3646954_-	PRK06778, PRK06778, hypothetical protein; Validated	NA|580aa|up_0|CP034966.1_3646913_3648653_+	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|166aa|down_0|CP034966.1_3648970_3649468_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|253aa|down_1|CP034966.1_3649643_3650402_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|247aa|down_2|CP034966.1_3650693_3651434_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_3|CP034966.1_3651404_3652172_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|193aa|down_4|CP034966.1_3652377_3652956_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|815aa|down_5|CP034966.1_3653195_3655640_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|158aa|down_6|CP034966.1_3655682_3656156_-	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|257aa|down_7|CP034966.1_3656309_3657080_+	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	NA|150aa|down_8|CP034966.1_3658518_3658968_-	NA	NA|1020aa|down_9|CP034966.1_3658979_3662039_-	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]
GCA_002164865.2_ASM216486v2	CP034966	Escherichia coli strain WCHEC020032 chromosome, complete genome	12	3838853-3838968	10	CRISPRCasFinder	no		cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	AACGCCTGATGCGACGCTGACGCGTCTTATC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,PD-DExK,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|393aa|up_9|CP034966.1_3826868_3828047_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|44aa|up_8|CP034966.1_3828148_3828280_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|552aa|up_7|CP034966.1_3828368_3830024_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|CP034966.1_3830187_3831171_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|CP034966.1_3831146_3832757_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|CP034966.1_3832740_3833439_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|CP034966.1_3833552_3834317_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|CP034966.1_3834402_3835281_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|CP034966.1_3835619_3837320_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|CP034966.1_3837330_3838833_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|CP034966.1_3839032_3839728_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|CP034966.1_3839802_3842154_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|CP034966.1_3842318_3845225_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|CP034966.1_3845236_3845896_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|272aa|down_4|CP034966.1_3846012_3846828_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_5|CP034966.1_3847082_3849437_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_6|CP034966.1_3849489_3850776_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_7|CP034966.1_3850775_3851765_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_8|CP034966.1_3851761_3852583_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_9|CP034966.1_3852585_3852963_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
