The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022038	Jonesia denitrificans strain FDAARGOS_301 chromosome, complete genome	2788798	1355430	1415788	2788798	terminase,capsid,portal,tail	Propionibacterium_phage(23.68%)	94	NA	NA
ASE08808.1|1355430_1355715_-	hypothetical protein	NA	A0A2K9VEP4	Gordonia_phage	47.1	3.5e-09
ASE08809.1|1355819_1356101_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08810.1|1356205_1356763_-|tail	phage tail protein	tail	A0A0B5A550	Streptococcus_phage	49.4	6.0e-37
ASE08811.1|1356824_1357172_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08812.1|1357164_1357440_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08813.1|1357432_1357768_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08814.1|1357769_1358177_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08815.1|1358190_1358370_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08816.1|1358369_1359269_-|capsid	major capsid protein	capsid	A0A2H4IYA3	uncultured_Caudovirales_phage	75.9	1.3e-126
ASE08817.1|1359280_1359715_-	hypothetical protein	NA	A0A0E3DMH3	Propionibacterium_phage	39.1	6.6e-07
ASE08818.1|1359810_1360560_-	hypothetical protein	NA	A0A1D8ETP7	Propionibacterium_phage	43.3	1.5e-38
ASE08819.1|1360543_1361965_-|portal	phage portal protein	portal	A0A068F3B8	Mycobacterium_phage	38.3	5.2e-77
ASE10091.2|1361961_1363407_-|terminase	terminase	terminase	A0A0H4IRX9	Propionibacterium_phage	49.4	3.3e-111
ASE08820.1|1363387_1363606_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08821.1|1363762_1364317_-	HNH endonuclease	NA	A0A1D8ETP1	Propionibacterium_phage	47.6	6.4e-15
ASE08822.1|1364365_1364548_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08823.1|1364544_1365072_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08824.1|1365123_1365327_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08825.1|1365484_1365868_-	DUF4326 domain-containing protein	NA	A0A142K9N0	Gordonia_phage	40.8	4.4e-23
ASE08826.1|1365861_1366143_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08829.1|1366757_1368041_-	helicase DnaB	NA	C7BGG1	Burkholderia_phage	30.8	5.8e-43
ASE08830.1|1368037_1368397_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08831.1|1368393_1369350_-	hypothetical protein	NA	A0A2K9VH47	Gordonia_phage	34.9	1.6e-34
ASE08832.1|1369339_1369591_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
ASE08833.1|1369587_1369953_-	transcription factor WhiB	NA	A0A2P1N2X5	Mycobacterium_phage	38.2	1.6e-06
ASE08834.1|1369949_1370135_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08835.1|1370253_1370649_-	hypothetical protein	NA	A0A1S5S8Q1	Streptococcus_phage	35.1	8.1e-12
ASE08836.2|1370638_1370986_-	hypothetical protein	NA	A0A159B6S1	Tsukamurella_phage	59.8	2.3e-23
ASE08837.1|1371099_1371453_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08838.1|1371570_1371984_-	single-stranded DNA-binding protein	NA	V5RAD6	Arthrobacter_phage	47.7	7.9e-18
ASE08839.1|1371985_1372237_-	glutaredoxin family protein	NA	NA	NA	NA	NA
ASE08840.1|1372342_1372555_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08841.1|1372551_1373193_-	hypothetical protein	NA	G9FH58	Rhodococcus_phage	50.9	2.4e-37
ASE08842.1|1373185_1374034_-	hypothetical protein	NA	G8CLD3	Synechococcus_phage	34.4	6.1e-25
ASE08843.1|1374026_1374308_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08844.1|1375653_1375857_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08845.1|1375853_1376624_-	hypothetical protein	NA	A0A0K0N5U2	Gordonia_phage	33.5	4.6e-27
ASE08846.1|1376903_1377170_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08847.1|1377254_1377461_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ASE08848.1|1377430_1378018_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ASE08849.1|1377980_1378394_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
ASE08850.1|1378747_1380181_+	hypothetical protein	NA	A0A1D8ETR5	Propionibacterium_phage	32.2	6.0e-57
ASE08851.1|1380346_1380592_+	hypothetical protein	NA	NA	NA	NA	NA
ASE08852.1|1380647_1381055_+	hypothetical protein	NA	NA	NA	NA	NA
ASE08853.1|1381224_1382373_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08854.1|1382359_1382596_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08855.1|1382582_1382798_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08856.1|1383692_1383977_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08857.1|1383973_1384360_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08858.1|1384382_1384991_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08859.1|1384991_1385747_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08860.1|1386023_1386827_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08861.1|1386869_1389596_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08862.1|1389522_1391628_-	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
ASE08863.1|1391965_1393909_-	hypothetical protein	NA	A0A2H4JDQ9	uncultured_Caudovirales_phage	51.9	2.9e-70
ASE08864.1|1394063_1394540_+	hypothetical protein	NA	NA	NA	NA	NA
ASE08865.1|1394593_1394878_-	hypothetical protein	NA	A0A2K9VEP4	Gordonia_phage	47.1	3.5e-09
ASE08866.1|1394982_1395264_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08867.1|1395368_1395926_-|tail	phage tail protein	tail	A0A0B5A550	Streptococcus_phage	49.4	6.0e-37
ASE08868.1|1395987_1396335_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08869.1|1396327_1396603_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08870.1|1396595_1396931_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08871.1|1396932_1397340_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08872.1|1397353_1397533_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08873.1|1397532_1398432_-|capsid	major capsid protein	capsid	A0A2H4IYA3	uncultured_Caudovirales_phage	75.9	1.3e-126
ASE08874.1|1398443_1398878_-	hypothetical protein	NA	A0A0E3DMH3	Propionibacterium_phage	39.1	6.6e-07
ASE08875.1|1398973_1399723_-	hypothetical protein	NA	A0A1D8ETP7	Propionibacterium_phage	43.3	1.5e-38
ASE08876.1|1399706_1401128_-|portal	phage portal protein	portal	A0A068F3B8	Mycobacterium_phage	38.3	5.2e-77
ASE10092.2|1401124_1402570_-|terminase	terminase	terminase	A0A0H4IRX9	Propionibacterium_phage	49.4	3.3e-111
ASE08877.1|1402550_1402769_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08878.1|1402925_1403480_-	HNH endonuclease	NA	A0A1D8ETP1	Propionibacterium_phage	47.6	6.4e-15
ASE08879.1|1403528_1403711_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08880.1|1403707_1404235_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08881.1|1404286_1404490_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08882.1|1404647_1405031_-	DUF4326 domain-containing protein	NA	A0A142K9N0	Gordonia_phage	40.8	4.4e-23
ASE08883.1|1405024_1405306_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08886.1|1405920_1407204_-	helicase DnaB	NA	C7BGG1	Burkholderia_phage	30.8	5.8e-43
ASE08887.1|1407200_1407560_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08888.1|1407556_1408513_-	hypothetical protein	NA	A0A2K9VH47	Gordonia_phage	34.9	1.6e-34
ASE08889.1|1408502_1408754_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
ASE08890.1|1408750_1409116_-	transcription factor WhiB	NA	A0A2P1N2X5	Mycobacterium_phage	38.2	1.6e-06
ASE08891.1|1409112_1409298_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08892.1|1409416_1409812_-	hypothetical protein	NA	A0A1S5S8Q1	Streptococcus_phage	35.1	8.1e-12
ASE08893.2|1409801_1410149_-	hypothetical protein	NA	A0A159B6S1	Tsukamurella_phage	59.8	2.3e-23
ASE08894.1|1410262_1410616_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08895.1|1410733_1411147_-	single-stranded DNA-binding protein	NA	V5RAD6	Arthrobacter_phage	47.7	7.9e-18
ASE08896.1|1411148_1411400_-	glutaredoxin family protein	NA	NA	NA	NA	NA
ASE08897.1|1411505_1411718_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08898.1|1411714_1412356_-	hypothetical protein	NA	G9FH58	Rhodococcus_phage	50.9	2.4e-37
ASE08899.1|1412348_1413197_-	hypothetical protein	NA	G8CLD3	Synechococcus_phage	34.4	6.1e-25
ASE08900.1|1413189_1413471_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08901.1|1413696_1414716_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08902.1|1414817_1415021_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08903.1|1415017_1415788_-	hypothetical protein	NA	A0A0K0N5U2	Gordonia_phage	33.5	4.6e-27
>prophage 2
CP022038	Jonesia denitrificans strain FDAARGOS_301 chromosome, complete genome	2788798	1529307	1549181	2788798	terminase,capsid,portal	Mycobacterium_phage(22.22%)	30	NA	NA
ASE08994.1|1529307_1530270_-|capsid	phage major capsid protein	capsid	S5Y5B1	Mycobacterium_phage	69.2	2.9e-124
ASE08995.1|1530272_1530800_-	hypothetical protein	NA	NA	NA	NA	NA
ASE08996.1|1530876_1531647_-	hypothetical protein	NA	I3NLA2	Bifidobacterium_phage	36.7	2.1e-32
ASE08997.1|1531646_1533053_-|portal	phage portal protein	portal	I3NLA3	Bifidobacterium_phage	39.6	1.1e-87
ASE08998.1|1532977_1534759_-|terminase	terminase	terminase	I3NLA4	Bifidobacterium_phage	59.5	5.0e-202
ASE08999.1|1534742_1535111_-	hypothetical protein	NA	A0A097EWH3	Mycobacterium_phage	42.9	1.4e-18
ASE09000.1|1535159_1535729_-	DNA primase	NA	A0A2P1CIA7	Actinomyces_phage	47.8	1.1e-33
ASE09001.1|1535972_1536740_-	HNH endonuclease	NA	A0A1C9M094	Mycobacterium_phage	28.7	1.6e-11
ASE10102.1|1536804_1537107_-	HNH endonuclease	NA	A0A2H5BLP3	Streptomyces_phage	45.5	1.8e-11
ASE09002.1|1537419_1538061_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09003.1|1538179_1538563_-	DUF4326 domain-containing protein	NA	A0A142K9N0	Gordonia_phage	40.8	4.4e-23
ASE09004.1|1538556_1538838_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09007.1|1539452_1540736_-	helicase DnaB	NA	C7BGG1	Burkholderia_phage	30.8	5.8e-43
ASE09008.1|1540732_1541092_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09009.1|1541088_1542045_-	hypothetical protein	NA	A0A2K9VH47	Gordonia_phage	34.9	1.6e-34
ASE09010.1|1542034_1542286_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
ASE09011.1|1542282_1542648_-	transcription factor WhiB	NA	A0A2P1N2X5	Mycobacterium_phage	38.2	1.6e-06
ASE09012.1|1542644_1542830_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09013.1|1542948_1543344_-	hypothetical protein	NA	A0A1S5S8Q1	Streptococcus_phage	35.1	8.1e-12
ASE09014.2|1543333_1543681_-	hypothetical protein	NA	A0A159B6S1	Tsukamurella_phage	59.8	2.3e-23
ASE09015.1|1543794_1544148_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09016.1|1544265_1544679_-	single-stranded DNA-binding protein	NA	V5RAD6	Arthrobacter_phage	47.7	7.9e-18
ASE09017.1|1544680_1544932_-	glutaredoxin family protein	NA	NA	NA	NA	NA
ASE09018.1|1545037_1545250_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09019.1|1545246_1545780_-	hypothetical protein	NA	G9FH01	Rhodococcus_phage	54.8	9.5e-32
ASE09020.1|1545779_1546457_-	hypothetical protein	NA	G9FH00	Rhodococcus_phage	46.9	2.1e-60
ASE09021.1|1546446_1546731_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09022.1|1547098_1548157_-	hypothetical protein	NA	NA	NA	NA	NA
ASE09023.1|1548258_1548450_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
ASE09024.1|1548446_1549181_-	phage antirepressor Ant	NA	A0A0C5AEJ9	Bacteriophage	49.8	1.1e-65
