The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	451770	533553	5480603	tRNA,capsid,transposase,integrase,head,tail,protease,terminase,portal	uncultured_Caudovirales_phage(55.0%)	81	469378:469395	485373:485390
QBI84575.1|451770_452718_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
QBI84576.1|452732_453242_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
QBI84577.1|453370_454495_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
QBI84578.1|454466_454940_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
QBI84579.1|454965_455508_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84580.1|455512_456085_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
QBI84581.1|456088_456907_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
QBI84582.1|456903_457161_+	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
QBI84583.1|457136_457691_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
QBI84584.1|463486_463708_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84585.1|464001_467112_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QBI84586.1|467124_468264_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI84587.1|468642_469293_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
469378:469395	attL	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
QBI84588.1|469568_470795_+|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
QBI84589.1|470887_471829_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84590.1|472010_472295_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
QBI84591.1|472305_473085_+	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
QBI89200.1|473208_473403_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
QBI89199.1|473536_473806_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.4	2.4e-44
QBI84592.1|473798_473987_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84593.1|473979_474294_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84594.1|474290_474659_+	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
QBI84595.1|474655_475021_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84596.1|475020_477156_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
QBI84597.1|477498_477834_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84598.1|477882_478395_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84599.1|478658_479825_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
QBI84600.1|479876_480437_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
QBI84601.1|480438_481680_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
QBI84602.1|481676_482012_+|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
QBI84603.1|482008_482308_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
QBI84604.1|482307_482751_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
QBI84605.1|482877_483069_+|terminase	terminase	terminase	NA	NA	NA	NA
QBI84606.1|483026_483383_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
QBI84607.1|483366_485028_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
QBI84608.1|485030_485222_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84609.1|485375_485672_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
485373:485390	attR	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
QBI84610.1|485696_486662_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
QBI84611.1|486819_487047_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84612.1|487019_487901_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
QBI89201.1|487912_489364_-	sodium/pantothenate symporter	NA	NA	NA	NA	NA
QBI84613.1|489353_489596_-	DUF997 family protein	NA	NA	NA	NA	NA
QBI84614.1|489706_491056_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
QBI84615.1|491066_491534_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
QBI84616.1|491556_492009_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
QBI84617.1|492232_492841_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
QBI84618.1|492840_493842_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
QBI84619.1|494070_494262_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84620.1|494341_496282_+	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
QBI84621.1|496587_497631_+	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
QBI84622.1|497701_498694_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
QBI84623.1|498693_499182_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
QBI84624.1|499189_499771_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
QBI84625.1|499773_501243_+	ribonuclease G	NA	NA	NA	NA	NA
QBI84626.1|501280_505078_+	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
QBI84627.1|505166_506612_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
QBI84628.1|506647_507577_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA	NA
QBI84629.1|507708_507912_+	DUF1656 domain-containing protein	NA	NA	NA	NA	NA
QBI84630.1|507919_508852_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
QBI84631.1|508857_510825_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
QBI84632.1|510904_511180_+	hypothetical protein	NA	NA	NA	NA	NA
QBI84633.1|511230_511497_-	peroxide/acid stress response protein YhcN	NA	NA	NA	NA	NA
QBI84634.1|511595_511859_-	peroxide/acid stress response protein YhcN	NA	NA	NA	NA	NA
QBI84635.1|512234_512705_-	transcriptional regulator ArgR	NA	NA	NA	NA	NA
QBI84636.1|513119_514058_+	malate dehydrogenase	NA	NA	NA	NA	NA
QBI84637.1|514194_515253_-|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
QBI84638.1|515340_516708_-|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.3	6.0e-22
QBI84639.1|516881_517280_-	DUF1043 family protein	NA	NA	NA	NA	NA
QBI84640.1|517470_518598_+	cell division protein ZapE	NA	NA	NA	NA	NA
QBI84641.1|518863_519292_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
QBI84642.1|519307_519700_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
QBI89202.1|519809_520013_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84643.1|520011_520650_+	stringent starvation protein A	NA	NA	NA	NA	NA
QBI84644.1|520653_521148_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	1.5e-26
QBI84645.1|521272_521977_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
QBI84646.1|522031_523450_-	glutamate synthase small subunit	NA	NA	NA	NA	NA
QBI84647.1|523459_527920_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
QBI84648.1|528593_529526_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	33.8	3.4e-16
QBI84649.1|529577_530861_-	MFS transporter	NA	NA	NA	NA	NA
QBI84650.1|530946_531963_-	Zn-dependent oxidoreductase	NA	NA	NA	NA	NA
QBI84651.1|532360_533553_-|transposase	IS3-like element ISKpn18 family transposase	transposase	U5P429	Shigella_phage	43.5	3.5e-50
>prophage 2
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	691565	703218	5480603		Enterobacteria_phage(70.0%)	13	NA	NA
QBI84784.1|691565_693899_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
QBI84785.1|693910_694231_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84786.1|694227_694455_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84787.1|694451_695009_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
QBI84788.1|695005_695272_-	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
QBI84789.1|695813_696551_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
QBI84790.1|696547_696793_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
QBI84791.1|696810_697377_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
QBI84792.1|697944_698370_-	hypothetical protein	NA	NA	NA	NA	NA
QBI84793.1|698369_699320_-	cobyrinic acid a,c-diamide synthase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
QBI84794.1|699307_700498_-	DUF4102 domain-containing protein	NA	Q7M297	Enterobacteria_phage	62.7	6.4e-145
QBI84795.1|700850_702104_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
QBI84796.1|702114_703218_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
>prophage 3
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1355001	1393537	5480603	plate,capsid,transposase,lysis,integrase,head,tail,terminase,portal	Salmonella_phage(82.5%)	48	1354909:1354927	1393609:1393627
1354909:1354927	attL	CAGGCAACAAAAAACCCAT	NA	NA	NA	NA
QBI85377.1|1355001_1356054_-|integrase	site-specific integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
QBI85378.1|1356221_1356473_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85379.1|1356472_1357957_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI85380.1|1358055_1359000_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89239.1|1359011_1359890_-	Repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
QBI85381.1|1360035_1360257_+	regulator	NA	NA	NA	NA	NA
QBI85382.1|1360289_1360799_+	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
QBI85383.1|1360806_1361007_+	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
QBI85384.1|1360970_1361312_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
QBI85385.1|1361379_1361613_+	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
QBI85386.1|1361612_1361840_+	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
QBI85387.1|1361836_1362694_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
QBI85388.1|1362690_1365105_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
QBI89240.1|1365258_1365447_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
QBI85389.1|1365385_1365691_+	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
QBI85390.1|1365805_1366483_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85391.1|1366630_1367611_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
QBI85392.1|1367958_1369701_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85393.1|1369762_1370788_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
QBI85394.1|1370787_1372554_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
QBI85395.1|1372696_1373530_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
QBI85396.1|1373546_1374605_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
QBI85397.1|1374608_1375259_+	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
QBI85398.1|1375354_1375819_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
QBI85399.1|1375818_1376022_+|tail	phage tail protein	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
QBI85400.1|1376025_1376241_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
QBI85401.1|1376221_1376731_+	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
QBI85402.1|1376735_1377119_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
QBI85403.1|1377115_1377544_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
QBI85404.1|1377639_1378071_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
QBI85405.1|1378063_1378510_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
QBI85406.1|1378506_1379199_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85407.1|1379293_1379866_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
QBI85408.1|1379862_1380225_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
QBI85409.1|1380211_1381120_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
QBI85410.1|1381112_1381712_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
QBI85411.1|1381713_1384665_+	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
QBI85412.1|1384668_1385400_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85413.1|1385396_1385600_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85414.1|1385629_1386706_+|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
QBI85415.1|1386844_1388017_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
QBI85416.1|1388026_1388542_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
QBI85417.1|1388594_1388894_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
QBI85418.1|1388908_1389028_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
QBI85419.1|1389020_1391648_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
QBI85420.1|1391644_1392130_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
QBI85421.1|1392126_1393227_+	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
QBI85422.1|1393318_1393537_+	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
1393609:1393627	attR	CAGGCAACAAAAAACCCAT	NA	NA	NA	NA
>prophage 4
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1427953	1437417	5480603	tRNA,protease	Dickeya_phage(16.67%)	8	NA	NA
QBI85456.1|1427953_1429069_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
QBI85457.1|1429065_1431006_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
QBI85458.1|1431082_1431304_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
QBI85459.1|1431629_1431947_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
QBI85460.1|1431977_1434257_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
QBI85461.1|1434377_1434596_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
QBI85462.1|1434949_1435651_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
QBI85463.1|1435695_1437417_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
>prophage 5
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1518782	1590080	5480603	plate,capsid,integrase,head,tail,protease,terminase,portal	Enterobacteria_phage(38.71%)	80	1557377:1557397	1591901:1591921
QBI85523.1|1518782_1520540_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
QBI85524.1|1520725_1521178_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
QBI85525.1|1521309_1522380_-	porin OmpA	NA	NA	NA	NA	NA
QBI85526.1|1522732_1523242_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
QBI85527.1|1523260_1523500_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85528.1|1523590_1524187_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
QBI85529.1|1524200_1526336_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
QBI85530.1|1526353_1526800_-	YccF domain-containing protein	NA	NA	NA	NA	NA
QBI85531.1|1526924_1528979_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	26.0	1.8e-14
QBI85532.1|1528990_1529449_-	methylglyoxal synthase	NA	NA	NA	NA	NA
QBI85533.1|1529603_1530017_+	CoA-binding protein	NA	NA	NA	NA	NA
QBI85534.1|1530046_1530364_-	heat shock protein HspQ	NA	NA	NA	NA	NA
QBI85535.1|1530423_1531626_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
QBI85536.1|1531816_1532371_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
QBI85537.1|1532388_1533177_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBI85538.1|1533225_1533507_+	acylphosphatase	NA	NA	NA	NA	NA
QBI85539.1|1533503_1533833_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
QBI85540.1|1533921_1534581_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	46.6	3.2e-37
QBI85541.1|1534850_1536503_+	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA	NA
QBI85542.1|1536859_1537480_-	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI89244.1|1537458_1537746_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85543.1|1537810_1537999_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85544.1|1538168_1539134_-	oxidoreductase	NA	NA	NA	NA	NA
QBI85545.1|1539191_1540640_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
QBI85546.1|1540658_1541783_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
QBI85547.1|1541819_1543427_-	BCCT family transporter	NA	NA	NA	NA	NA
QBI85548.1|1543931_1545017_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
QBI89245.1|1545120_1546062_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI85549.1|1546058_1547339_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
QBI89246.1|1547341_1548829_-	aldehyde dehydrogenase PuuC	NA	NA	NA	NA	NA
QBI85550.1|1549149_1549707_-	HTH-type transcriptional regulator PuuR	NA	NA	NA	NA	NA
QBI85551.1|1549732_1550497_-	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA	NA
QBI85552.1|1550710_1552132_+	glutamine synthetase	NA	NA	NA	NA	NA
QBI85553.1|1552304_1552496_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85554.1|1552485_1553877_+	APC family permease	NA	NA	NA	NA	NA
QBI85555.1|1553995_1554118_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85556.1|1554374_1554596_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85557.1|1554616_1555405_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
QBI85558.1|1555520_1555970_-	transcriptional regulator	NA	NA	NA	NA	NA
QBI85559.1|1556122_1557370_+	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA	NA
1557377:1557397	attL	AAACCCGGAGCACTCCGGGTT	NA	NA	NA	NA
QBI85560.1|1557466_1558474_-|integrase	integrase	integrase	A0A0M4RTQ0	Salmonella_phage	52.1	7.6e-99
QBI85561.1|1558561_1558864_-	XRE family transcriptional regulator	NA	Q1JS63	Enterobacteria_phage	61.0	2.6e-26
QBI85562.1|1558958_1559291_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89247.1|1559482_1559680_+	DUF4761 domain-containing protein	NA	NA	NA	NA	NA
QBI85563.1|1559696_1560083_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85564.1|1560098_1560371_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85565.1|1560438_1560663_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85566.1|1560659_1561238_+	3'-5' exoribonuclease	NA	A0A192Y6E0	Salmonella_phage	39.5	2.7e-32
QBI85567.1|1561246_1562215_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A0M4QWR0	Salmonella_phage	49.1	3.1e-73
QBI85568.1|1562516_1563533_+	DNA cytosine methyltransferase	NA	Q6J1P4	Burkholderia_virus	54.8	2.4e-92
QBI85569.1|1563525_1566120_+	replication endonuclease	NA	A0A0M4RTM8	Salmonella_phage	51.7	1.1e-192
QBI85570.1|1566291_1566699_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89248.1|1566971_1567286_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89249.1|1567693_1568728_-|portal	phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	68.6	2.0e-139
QBI85571.1|1568748_1570470_-	oxidoreductase	NA	A0A0A7NV54	Enterobacteria_phage	66.5	4.3e-227
QBI85572.1|1570630_1571464_+|capsid	GPO family capsid scaffolding protein	capsid	A0A0A7NRY7	Enterobacteria_phage	65.3	6.5e-96
QBI85573.1|1571487_1572537_+|capsid	phage major capsid protein, P2 family	capsid	A0A0M3ULA3	Salmonella_phage	53.9	2.3e-106
QBI85574.1|1572583_1573444_+|terminase	terminase	terminase	B9A7B6	Serratia_phage	68.4	1.0e-83
QBI85575.1|1573546_1574044_+|head	head completion/stabilization protein	head	B9A7B7	Serratia_phage	69.7	2.2e-59
QBI85576.1|1574043_1574244_+|tail	phage tail protein	tail	A0A0A7NV57	Enterobacteria_phage	64.6	3.0e-15
QBI85577.1|1574234_1574516_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85578.1|1574512_1575064_+	lysozyme	NA	Q1I0Z1	Pasteurella_virus	42.5	6.8e-33
QBI85579.1|1575060_1575456_+	DUF2570 domain-containing protein	NA	NA	NA	NA	NA
QBI85580.1|1575340_1575604_+	peptidase	NA	NA	NA	NA	NA
QBI85581.1|1575600_1576059_+|tail	phage tail protein	tail	A0A0A7NPU6	Enterobacteria_phage	46.8	3.1e-31
QBI85582.1|1576055_1576697_+	phage virion morphogenesis protein	NA	A0A0M4RCU1	Salmonella_phage	49.8	1.4e-45
QBI85583.1|1576696_1577281_+|plate	phage baseplate assembly protein V	plate	A0A0A7NRZ3	Enterobacteria_phage	61.4	8.7e-63
QBI85584.1|1577277_1577646_+|plate	baseplate assembly protein	plate	A0A0A7NQ90	Enterobacteria_phage	57.4	2.3e-29
QBI85585.1|1577632_1578532_+|plate	baseplate assembly protein	plate	A0A0A7NPY5	Enterobacteria_phage	62.2	6.2e-92
QBI85586.1|1578524_1579127_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	44.8	1.8e-42
QBI85587.1|1579128_1581393_+	hypothetical protein	NA	B5TAB2	Burkholderia_phage	39.7	5.7e-102
QBI85588.1|1581398_1582142_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85589.1|1582153_1583230_+|tail	phage tail protein	tail	Q37842	Escherichia_phage	48.3	2.3e-32
QBI85590.1|1583327_1583816_-|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	59.9	2.9e-51
QBI85591.1|1583827_1586563_-|tail	phage tail tape measure protein	tail	B9A7B3	Serratia_phage	80.6	2.0e-242
QBI89250.1|1586552_1586705_-|tail	GpE family phage tail protein	tail	O80316	Escherichia_phage	71.4	1.5e-11
QBI85592.1|1586725_1587025_-|tail	phage tail assembly protein	tail	B9A7B2	Serratia_phage	72.7	2.9e-30
QBI85593.1|1587076_1587592_-|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	70.0	2.6e-63
QBI85594.1|1587592_1588774_-|tail	phage tail protein	tail	A0A0A7NV69	Enterobacteria_phage	69.4	8.0e-156
QBI85595.1|1588925_1590080_+	phage late control D family protein	NA	B9A7A9	Serratia_phage	77.2	6.6e-171
1591901:1591921	attR	AAACCCGGAGCACTCCGGGTT	NA	NA	NA	NA
>prophage 6
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1699655	1787534	5480603	tRNA,capsid,holin,integrase,head,tail,terminase,portal	Klebsiella_phage(45.45%)	97	1695953:1695967	1754073:1754087
1695953:1695967	attL	GGTGACGCAGCAGGG	NA	NA	NA	NA
QBI85696.1|1699655_1700762_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
QBI85697.1|1700818_1701277_-	NUDIX hydrolase	NA	NA	NA	NA	NA
QBI85698.1|1701293_1701944_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
QBI85699.1|1702184_1703435_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
QBI85700.1|1703552_1704680_-|integrase	integrase	integrase	O21925	Phage_21	58.4	4.4e-119
QBI85701.1|1704660_1704906_-	excisionase	NA	NA	NA	NA	NA
QBI85702.1|1704958_1707097_-	exonuclease	NA	S4TNL0	Salmonella_phage	42.7	5.6e-99
QBI85703.1|1707238_1707583_-	transcriptional regulator	NA	NA	NA	NA	NA
QBI85704.1|1707625_1707820_-	DUF1482 family protein	NA	NA	NA	NA	NA
QBI85705.1|1707829_1708048_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89259.1|1708210_1708525_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85706.1|1708846_1709284_-	helix-turn-helix domain-containing protein	NA	H6WRX4	Salmonella_phage	62.2	1.3e-39
QBI85707.1|1709372_1709597_+	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	62.5	1.3e-19
QBI85708.1|1709599_1710154_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89260.1|1710213_1711218_+	DNA-binding protein	NA	A0A0U2RT81	Escherichia_phage	40.0	1.0e-31
QBI85709.1|1711210_1711675_+	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	72.2	4.1e-63
QBI85710.1|1711688_1712129_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85711.1|1712477_1713869_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89261.1|1713957_1714827_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85712.1|1715178_1715892_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85713.1|1716065_1717427_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA	NA
QBI85714.1|1718016_1718268_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85715.1|1718267_1719752_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI85716.1|1719830_1720064_+	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	3.7e-25
QBI85717.1|1720075_1720366_+	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	8.0e-17
QBI85718.1|1720406_1720799_+	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	8.0e-12
QBI85719.1|1720795_1720999_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85720.1|1720998_1722030_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.6	4.7e-96
QBI85721.1|1722046_1722649_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.6	1.1e-76
QBI85722.1|1722892_1723096_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85723.1|1724900_1725116_+|holin	holin	holin	A5LH82	Enterobacteria_phage	88.7	2.7e-30
QBI85724.1|1725115_1725613_+	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.6	1.1e-77
QBI85725.1|1725609_1725960_+	hypothetical protein	NA	R9TPM9	Aeromonas_phage	38.1	7.9e-11
QBI85726.1|1726909_1727347_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85727.1|1727385_1727610_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85728.1|1727936_1728299_+	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	83.3	1.2e-57
QBI85729.1|1728250_1728574_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85730.1|1728570_1729002_+	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.8e-41
QBI85731.1|1729250_1729685_+|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
QBI85732.1|1729684_1731406_+|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.5e-190
QBI85733.1|1731399_1731579_+	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
QBI85734.1|1731578_1732838_+|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	1.8e-222
QBI85735.1|1732874_1733795_+	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
QBI85736.1|1733872_1735159_+|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.0	9.8e-216
QBI85737.1|1735217_1735478_+	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	60.5	7.4e-22
QBI85738.1|1735458_1735776_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
QBI85739.1|1735772_1736111_+|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	90.2	2.8e-53
QBI85740.1|1736091_1736481_+	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
QBI85741.1|1736477_1736879_+	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	2.3e-62
QBI85742.1|1736910_1737372_+|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
QBI85743.1|1737429_1737795_+|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
QBI89262.1|1737809_1738028_+	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	90.5	5.4e-34
QBI85744.1|1738027_1741363_+|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	88.3	0.0e+00
QBI85745.1|1741362_1741701_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	1.4e-57
QBI85746.1|1741697_1742453_+|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.5	4.6e-125
QBI85747.1|1742454_1743165_+	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.3	1.9e-136
QBI85748.1|1743206_1743629_+	hypothetical protein	NA	J9Q806	Salmonella_phage	50.0	5.9e-29
QBI85749.1|1743655_1744249_+|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	76.6	8.0e-80
QBI85750.1|1744311_1757016_+	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.1	0.0e+00
1754073:1754087	attR	GGTGACGCAGCAGGG	NA	NA	NA	NA
QBI85751.1|1757084_1758581_+|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	63.7	1.4e-125
QBI85752.1|1758735_1758888_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
QBI85753.1|1759160_1759874_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QBI85754.1|1759870_1760263_-	amino acid-binding protein	NA	NA	NA	NA	NA
QBI85755.1|1760255_1760579_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
QBI85756.1|1761015_1761243_-	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
QBI85757.1|1761355_1762549_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
QBI85758.1|1763170_1763356_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA	NA
QBI85759.1|1763446_1763941_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
QBI85760.1|1763967_1764474_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
QBI85761.1|1764490_1765378_+	manganese catalase family protein	NA	NA	NA	NA	NA
QBI85762.1|1765433_1766840_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
QBI85763.1|1766836_1767847_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
QBI85764.1|1767962_1768160_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85765.1|1768726_1769359_+	DNA-binding protein	NA	NA	NA	NA	NA
QBI85766.1|1769398_1769578_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85767.1|1769975_1770662_+	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI85768.1|1770972_1772481_-	UbiD family decarboxylase	NA	NA	NA	NA	NA
QBI85769.1|1772601_1773492_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI85770.1|1773498_1775283_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
QBI85771.1|1775356_1776565_-	HD domain-containing protein	NA	NA	NA	NA	NA
QBI85772.1|1776867_1777911_+	type II asparaginase	NA	NA	NA	NA	NA
QBI85773.1|1778165_1778357_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85774.1|1778572_1779487_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
QBI85775.1|1779576_1780215_+	leucine efflux protein LeuE	NA	NA	NA	NA	NA
QBI85776.1|1780345_1780609_+	DUF2534 family protein	NA	NA	NA	NA	NA
QBI85777.1|1780668_1780794_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89263.1|1780911_1780986_-	protein YoaJ	NA	NA	NA	NA	NA
QBI85778.1|1780985_1781087_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85779.1|1781144_1782158_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.4e-12
QBI85780.1|1782458_1782698_+	DUF333 domain-containing protein	NA	NA	NA	NA	NA
QBI89264.1|1782687_1783044_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
QBI85781.1|1783030_1783540_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
QBI85782.1|1783685_1784378_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85783.1|1784409_1785594_-	MFS transporter	NA	NA	NA	NA	NA
QBI89265.1|1785695_1786487_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBI85784.1|1786470_1786917_-	DUF441 domain-containing protein	NA	NA	NA	NA	NA
QBI85785.1|1787033_1787534_-|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
>prophage 7
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1915206	1928118	5480603	integrase	Enterobacteria_phage(50.0%)	20	1907184:1907199	1930800:1930815
1907184:1907199	attL	CATTTTTTTGCTCGTT	NA	NA	NA	NA
QBI85906.1|1915206_1916016_-	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
QBI85907.1|1916017_1917010_-	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
QBI85908.1|1917009_1917900_-	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
QBI85909.1|1918076_1919264_+|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	1.1e-120
QBI85910.1|1919160_1919475_-	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
QBI85911.1|1919471_1920134_-	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
QBI85912.1|1920130_1920559_-	regulator	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
QBI85913.1|1920555_1921236_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
QBI85914.1|1921237_1921525_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85915.1|1921521_1922367_-	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
QBI85916.1|1922382_1922667_-	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
QBI85917.1|1922755_1922950_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85918.1|1923378_1923582_+	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
QBI85919.1|1923663_1924740_-	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
QBI85920.1|1924885_1925005_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89268.1|1925027_1925726_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
QBI85921.1|1925837_1926065_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
QBI85922.1|1926105_1926327_+	transcriptional regulator	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
QBI85923.1|1926412_1927273_+	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
QBI85924.1|1927269_1928118_+	AAA family ATPase	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
1930800:1930815	attR	AACGAGCAAAAAAATG	NA	NA	NA	NA
>prophage 8
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1931251	1946847	5480603	holin,transposase	Enterobacteria_phage(26.67%)	19	NA	NA
QBI85927.1|1931251_1931719_+	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
QBI85928.1|1931699_1931867_+	NinE family protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
QBI85929.1|1931863_1932532_+	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
QBI85930.1|1932524_1933163_+	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
QBI85931.1|1933159_1933300_+	YlcG family protein	NA	NA	NA	NA	NA
QBI89269.1|1933299_1933989_+	antiterminator	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
QBI89270.1|1934638_1934938_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	4.5e-47
QBI85932.1|1934934_1935474_+	hypothetical protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
QBI85933.1|1935614_1936319_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89271.1|1937300_1938092_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
QBI85934.1|1938255_1938603_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
QBI85935.1|1939218_1939923_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI85936.1|1940515_1940938_+	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
QBI85937.1|1941584_1941836_+	hypothetical protein	NA	NA	NA	NA	NA
QBI85938.1|1941835_1943320_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI85939.1|1943399_1943819_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
QBI85940.1|1943820_1945086_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
QBI89272.1|1945161_1945989_-	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
QBI85941.1|1946175_1946847_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
>prophage 9
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	1979780	2052482	5480603	plate,transposase,lysis,head,tail,terminase	uncultured_Caudovirales_phage(32.08%)	87	NA	NA
QBI85971.1|1979780_1980542_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
QBI85972.1|1980758_1982291_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
QBI85973.1|1982489_1983038_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
QBI85974.1|1983234_1984416_+	DUF4102 domain-containing protein	NA	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
QBI85975.1|1984396_1984639_-	AlpA family transcriptional regulator	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
QBI85976.1|1984817_1985297_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85977.1|1985293_1985506_-	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
QBI85978.1|1985502_1985727_-	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
QBI85979.1|1985716_1986427_-	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
QBI85980.1|1986432_1986951_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
QBI85981.1|1987055_1987883_-	SPFH/Band 7/PHB domain protein	NA	Q8W654	Enterobacteria_phage	84.0	5.5e-111
QBI85982.1|1987879_1988074_-	hypothetical protein	NA	NA	NA	NA	NA
QBI85983.1|1988070_1988496_-	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
QBI85984.1|1988492_1988711_-	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	98.6	6.6e-32
QBI85985.1|1988682_1988937_-	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
QBI85986.1|1988929_1989295_-	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	99.2	6.9e-58
QBI85987.1|1989464_1989653_-	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
QBI85988.1|1989645_1989960_-	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
QBI85989.1|1990130_1990799_-	LexA family transcriptional regulator	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
QBI85990.1|1990896_1991118_+	XRE family transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
QBI85991.1|1991092_1991386_+	hypothetical protein	NA	A0A286S2B5	Klebsiella_phage	97.6	2.8e-38
QBI85992.1|1991694_1993353_+	DEAD/DEAH box helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
QBI85993.1|1993354_1994317_+	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
QBI85994.1|1994313_1994790_+	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
QBI85995.1|1994786_1995569_+	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
QBI85996.1|1995974_1996223_+|lysis	lysis protein	lysis	NA	NA	NA	NA
QBI85997.1|1996225_1996756_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
QBI85998.1|1996752_1997142_+	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
QBI85999.1|1997026_1997284_+	Rz1 lytic protein	NA	S5FXQ4	Shigella_phage	70.9	2.3e-23
QBI86000.1|1997376_1997697_+	negative regulator GrlR	NA	NA	NA	NA	NA
QBI86001.1|1997798_1998551_+	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
QBI86002.1|1998501_1999902_+|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
QBI86003.1|2000139_2001591_+	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
QBI89276.1|2001646_2002195_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
QBI86004.1|2002246_2003449_+	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
QBI86005.1|2003452_2003947_+	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
QBI86006.1|2003958_2004900_+	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
QBI86007.1|2004939_2005221_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86008.1|2005189_2005609_+	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
QBI86009.1|2005605_2006112_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86010.1|2006111_2006498_+|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
QBI89277.1|2006592_2007033_+	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
QBI86011.1|2007036_2008182_+	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
QBI86012.1|2008192_2008633_+	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
QBI86013.1|2008636_2009062_+	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
QBI86014.1|2009097_2009250_+	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
QBI86015.1|2009239_2011243_+	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
QBI86016.1|2011242_2011842_+	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
QBI86017.1|2011842_2012145_+	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
QBI86018.1|2012147_2013170_+	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
QBI86019.1|2013169_2013511_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
QBI86020.1|2013563_2013749_-	hypothetical protein	NA	NA	NA	NA	NA
QBI86021.1|2013785_2014352_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86022.1|2014405_2015059_+	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
QBI86023.1|2015060_2015414_+	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
QBI86024.1|2015413_2016610_+	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
QBI86025.1|2016606_2017380_+	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
QBI86026.1|2017379_2018246_+	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
QBI86027.1|2018245_2018443_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89278.1|2020793_2021522_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86028.1|2021532_2022264_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86029.1|2022260_2022470_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86030.1|2022574_2022859_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86031.1|2023081_2023330_-	DinI family protein	NA	S5MQI1	Escherichia_phage	70.4	1.4e-25
QBI86032.1|2023658_2023868_-	hypothetical protein	NA	NA	NA	NA	NA
QBI86033.1|2023925_2024906_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
QBI86034.1|2025914_2027459_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
QBI89279.1|2027471_2028812_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
QBI86035.1|2028808_2029498_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
QBI86036.1|2029494_2031201_+	OmpA family protein	NA	NA	NA	NA	NA
QBI86037.1|2031205_2031697_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
QBI86038.1|2031961_2034616_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.4	2.5e-96
QBI86039.1|2034608_2036987_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.8	9.2e-18
QBI86040.1|2036987_2037767_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
QBI86041.1|2037830_2038361_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI86042.1|2038429_2038960_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI86043.1|2039027_2039558_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI86044.1|2039626_2040157_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI86045.1|2040224_2040755_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI86046.1|2040742_2043160_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
QBI86047.1|2043204_2043462_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
QBI86048.1|2043458_2044598_+	hypothetical protein	NA	NA	NA	NA	NA
QBI86049.1|2044581_2048007_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
QBI86050.1|2048006_2048414_+	type VI secretion protein	NA	NA	NA	NA	NA
QBI86051.1|2048465_2049599_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
QBI86052.1|2049678_2051433_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
QBI86053.1|2051396_2052482_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 10
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	2237084	2247971	5480603		Escherichia_phage(87.5%)	9	NA	NA
QBI86222.1|2237084_2237705_-	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
QBI86223.1|2237697_2238963_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
QBI86224.1|2238974_2239877_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
QBI86225.1|2240137_2240899_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
QBI86226.1|2240919_2241780_-	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
QBI86227.1|2242077_2242338_+	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
QBI86228.1|2242424_2243513_+	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
QBI86229.1|2243543_2244809_-	MFS transporter	NA	NA	NA	NA	NA
QBI86230.1|2244863_2247971_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
>prophage 11
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	3228881	3240556	5480603	transposase	Escherichia_phage(33.33%)	10	NA	NA
QBI87129.1|3228881_3229862_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
QBI87130.1|3229902_3230814_-	acyltransferase	NA	NA	NA	NA	NA
QBI87131.1|3231176_3232343_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	9.1e-112
QBI87132.1|3232522_3233077_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.2	2.9e-52
QBI87133.1|3233091_3233982_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	2.8e-28
QBI87134.1|3234013_3234883_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	66.7	1.7e-110
QBI87135.1|3234896_3235961_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.7	9.8e-105
QBI87136.1|3236115_3237486_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	25.9	6.4e-32
QBI87137.1|3237507_3238923_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	31.0	1.4e-53
QBI87138.1|3239149_3240556_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	4.7e-38
>prophage 12
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	3283901	3290806	5480603		Bacillus_phage(33.33%)	6	NA	NA
QBI87168.1|3283901_3285380_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.9e-29
QBI87169.1|3285376_3286099_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
QBI87170.1|3286417_3287779_+	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
QBI89346.1|3288024_3288918_+	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
QBI87171.1|3289158_3289932_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
QBI89347.1|3289942_3290806_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	7.4e-10
>prophage 13
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	3594203	3675894	5480603	tRNA,transposase,holin,tail,protease,terminase	Salmonella_phage(36.21%)	86	NA	NA
QBI87437.1|3594203_3596207_-|tRNA	tRNA(Met) cytidine acetyltransferase	tRNA	NA	NA	NA	NA
QBI87438.1|3596216_3597092_-	neutral zinc metallopeptidase	NA	NA	NA	NA	NA
QBI87439.1|3597211_3597925_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A127KMU1	Cyanophage	35.7	1.1e-38
QBI87440.1|3598140_3599175_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
QBI87441.1|3599191_3600070_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
QBI87442.1|3600157_3600790_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA	NA
QBI87443.1|3600793_3601264_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
QBI87444.1|3601325_3602387_-	AI-2E family transporter	NA	NA	NA	NA	NA
QBI87445.1|3602609_3604073_+|protease	beta-barrel assembly-enhancing protease	protease	NA	NA	NA	NA
QBI87446.1|3604082_3604442_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA	NA
QBI87447.1|3604569_3605481_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	58.8	3.5e-74
QBI87448.1|3605477_3606179_-	DnaA inactivator Hda	NA	NA	NA	NA	NA
QBI87449.1|3606277_3607564_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	38.1	1.9e-65
QBI87450.1|3607659_3608286_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
QBI87451.1|3608503_3609937_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
QBI87452.1|3609946_3610840_-	beta-glucoside kinase	NA	NA	NA	NA	NA
QBI87453.1|3611103_3612141_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.5	8.2e-72
QBI87454.1|3612137_3612779_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	41.1	1.2e-28
QBI87455.1|3612959_3615020_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
QBI87456.1|3615023_3616556_+	exopolyphosphatase	NA	NA	NA	NA	NA
QBI87457.1|3616609_3618838_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA	NA
QBI87458.1|3619190_3619382_+	DUF2633 family protein	NA	G9L6F2	Escherichia_phage	79.3	3.3e-19
QBI87459.1|3619478_3620366_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI87460.1|3620463_3621696_+	MFS transporter	NA	NA	NA	NA	NA
QBI87461.1|3621989_3623168_+	anaerobic sulfatase maturase	NA	NA	NA	NA	NA
QBI87462.1|3623151_3625020_+	phosphatase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
QBI87463.1|3625206_3625707_-	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
QBI87464.1|3625703_3626333_-	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
QBI87465.1|3626322_3626628_-|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
QBI87466.1|3626614_3627019_-	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
QBI87467.1|3627105_3628422_-	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
QBI87468.1|3629530_3630793_+|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
QBI87469.1|3631661_3632642_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
QBI87470.1|3633061_3633889_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87471.1|3633929_3634193_-	hypothetical protein	NA	NA	NA	NA	NA
QBI87472.1|3637020_3637317_+	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
QBI87473.1|3637415_3637568_+	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	2.5e-14
QBI87474.1|3637602_3637797_-	hypothetical protein	NA	Q858F7	Salmonella_phage	67.2	6.5e-15
QBI87475.1|3637793_3640550_-	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
QBI87476.1|3640549_3642460_-	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
QBI87477.1|3642459_3644994_-	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
QBI87478.1|3645004_3645544_-	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
QBI87479.1|3645543_3646008_-	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
QBI87480.1|3646007_3648485_-	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
QBI87481.1|3648484_3649090_-	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
QBI87482.1|3649089_3649413_-	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
QBI87483.1|3649463_3649805_-	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
QBI87484.1|3649815_3650253_-	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
QBI87485.1|3650306_3651293_-	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
QBI87486.1|3651307_3651988_-	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
QBI87487.1|3651990_3652287_-	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
QBI87488.1|3652283_3653966_-|tail	phage tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
QBI87489.1|3653980_3654187_-	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
QBI87490.1|3654648_3654891_-	hypothetical protein	NA	NA	NA	NA	NA
QBI87491.1|3654940_3655312_+	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
QBI87492.1|3655355_3656831_-|terminase	terminase	terminase	Q858H3	Salmonella_phage	93.1	6.4e-280
QBI87493.1|3656827_3657412_-|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
QBI87494.1|3657489_3657747_-	lF-82	NA	NA	NA	NA	NA
QBI87495.1|3657899_3658151_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87496.1|3658150_3659635_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI87497.1|3659731_3660070_-	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
QBI89357.1|3660062_3660266_-	hypothetical protein	NA	NA	NA	NA	NA
QBI87498.1|3660265_3660886_-	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
QBI87499.1|3660882_3661176_-	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
QBI89358.1|3661175_3661643_-	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
QBI87500.1|3661936_3662581_-	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
QBI87501.1|3662577_3662769_-	hypothetical protein	NA	NA	NA	NA	NA
QBI87502.1|3662752_3663163_-	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
QBI87503.1|3663355_3663703_-	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
QBI87504.1|3663822_3664608_-	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
QBI87505.1|3664604_3665372_-	primosomal protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
QBI87506.1|3665371_3665581_-	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
QBI87507.1|3665727_3665961_-	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
QBI87508.1|3666115_3666697_+	XRE family transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
QBI87509.1|3667063_3667363_+	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
QBI87510.1|3667359_3668181_+	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
QBI87511.1|3668177_3669059_+	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
QBI87512.1|3669107_3669356_+	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
QBI87513.1|3669465_3669759_+	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
QBI87514.1|3669751_3669910_+	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
QBI87515.1|3669906_3670569_+	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
QBI87516.1|3670565_3671159_+	adenine methylase	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
QBI87517.1|3671155_3671398_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87518.1|3671340_3672591_-	DUF4102 domain-containing protein	NA	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
QBI87519.1|3672782_3674360_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
QBI87520.1|3674427_3675894_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
>prophage 14
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	3747244	3829754	5480603	plate,tRNA,capsid,transposase,lysis,integrase,head,coat,tail,terminase,portal	Salmonella_phage(69.23%)	90	3791939:3791985	3830294:3830340
QBI87583.1|3747244_3747982_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
QBI87584.1|3748113_3749445_+	ATP-dependent RNA helicase SrmB	NA	E3T5E1	Cafeteria_roenbergensis_virus	31.9	6.2e-48
QBI87585.1|3749490_3749874_-	autonomous glycyl radical cofactor GrcA	NA	A0A193GZ98	Escherichia_phage	79.3	4.0e-32
QBI87586.1|3750187_3750877_+	uracil-DNA glycosylase	NA	A0A077BCN4	Equid_alphaherpesvirus	53.0	1.3e-57
QBI87587.1|3750934_3752020_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
QBI87588.1|3752223_3752649_+	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	40.2	6.0e-13
QBI87589.1|3752718_3753417_+	DTW domain-containing protein	NA	NA	NA	NA	NA
QBI87590.1|3753451_3756103_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
QBI89360.1|3756223_3757579_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
QBI87591.1|3757620_3757944_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
QBI87592.1|3757947_3759246_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	31.5	3.1e-44
QBI87593.1|3765211_3767785_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.4	6.9e-128
QBI87594.1|3767914_3768646_-	polyphenol oxidase	NA	NA	NA	NA	NA
QBI87595.1|3768642_3769623_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
QBI87596.1|3769754_3770492_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
QBI87597.1|3770762_3771098_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
QBI89361.1|3771204_3771252_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87598.1|3771352_3772513_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
QBI87599.1|3772509_3773382_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
QBI87600.1|3773444_3774566_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
QBI87601.1|3774575_3775646_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.5	1.8e-90
QBI87602.1|3775988_3776498_+	YfiR family protein	NA	NA	NA	NA	NA
QBI87603.1|3776490_3777714_+	diguanylate cyclase DgcN	NA	NA	NA	NA	NA
QBI87604.1|3777727_3778210_+	OmpA family protein	NA	NA	NA	NA	NA
QBI87605.1|3778218_3779589_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
QBI87606.1|3779645_3780104_-	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
QBI87607.1|3780223_3780571_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
QBI87608.1|3780610_3781378_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
QBI89362.1|3781409_3781958_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
QBI87609.1|3781976_3782225_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
QBI87610.1|3782484_3783849_-	signal recognition particle protein	NA	NA	NA	NA	NA
QBI87611.1|3784012_3784804_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
QBI87612.1|3784823_3786110_+	DUF21 domain-containing protein	NA	NA	NA	NA	NA
QBI87613.1|3786229_3786820_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
QBI87614.1|3786944_3787823_+	NAD(+) kinase	NA	NA	NA	NA	NA
QBI87615.1|3787909_3789571_+	DNA repair protein RecN	NA	NA	NA	NA	NA
QBI87616.1|3789718_3790060_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
QBI87617.1|3790126_3790417_-	RnfH family protein	NA	NA	NA	NA	NA
QBI87618.1|3790406_3790883_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
QBI87619.1|3790993_3791476_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
3791939:3791985	attL	ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA	NA	NA	NA	NA
QBI87620.1|3792079_3792457_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87621.1|3792484_3792703_-	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
QBI87622.1|3792769_3793864_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
QBI87623.1|3793860_3794346_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
QBI87624.1|3794342_3796973_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
QBI87625.1|3796965_3797085_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
QBI87626.1|3797099_3797399_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
QBI87627.1|3797451_3797967_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
QBI87628.1|3797976_3799149_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
QBI87629.1|3799297_3800371_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
QBI87630.1|3800422_3801541_-	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
QBI87631.1|3801550_3803500_-|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
QBI87632.1|3803501_3804173_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
QBI87633.1|3804165_3805074_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
QBI87634.1|3805060_3805423_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
QBI87635.1|3805419_3805992_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
QBI87636.1|3806086_3806953_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87637.1|3806975_3807422_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
QBI87638.1|3807414_3807837_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
QBI87639.1|3807799_3808003_-	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	77.6	3.0e-23
QBI87640.1|3807932_3808361_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
QBI87641.1|3808357_3808741_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
QBI87642.1|3808745_3809255_-	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
QBI89363.1|3809235_3809451_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
QBI87643.1|3809454_3809658_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
QBI87644.1|3809657_3810122_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
QBI87645.1|3810217_3810871_-	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
QBI87646.1|3810874_3811927_-|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
QBI87647.1|3811943_3812777_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
QBI87648.1|3812917_3814681_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
QBI87649.1|3814680_3815724_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
QBI87650.1|3815780_3816050_-	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
QBI87651.1|3816571_3817573_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87652.1|3817572_3818652_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87653.1|3818638_3819322_+	hypothetical protein	NA	NA	NA	NA	NA
QBI87654.1|3819417_3819651_-	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
QBI87655.1|3819662_3819851_-	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
QBI87656.1|3819958_3821443_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI87657.1|3821442_3821694_-	hypothetical protein	NA	NA	NA	NA	NA
QBI87658.1|3821923_3824308_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
QBI87659.1|3824304_3825156_-	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
QBI87660.1|3825152_3825380_-	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
QBI87661.1|3825379_3825613_-	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
QBI87662.1|3825680_3826019_-	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
QBI87663.1|3825982_3826183_-	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
QBI87664.1|3826190_3826700_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
QBI87665.1|3826732_3826975_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
QBI87666.1|3827097_3827727_+	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
QBI87667.1|3827729_3828728_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
QBI87668.1|3828773_3829754_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
3830294:3830340	attR	ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA	NA	NA	NA	NA
>prophage 15
CP036371	Klebsiella pneumoniae strain WCHKP020037 chromosome, complete genome	5480603	4850627	4859502	5480603	transposase	Enterobacteria_phage(83.33%)	9	NA	NA
QBI88620.1|4850627_4852961_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.9	0.0e+00
QBI88621.1|4852975_4853296_-	hypothetical protein	NA	NA	NA	NA	NA
QBI88622.1|4853292_4853520_-	hypothetical protein	NA	NA	NA	NA	NA
QBI88623.1|4853516_4854065_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	69.4	1.1e-30
QBI88624.1|4854888_4855626_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.1e-70
QBI88625.1|4855622_4855868_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
QBI88626.1|4855885_4856452_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
QBI88627.1|4857192_4858272_+	hypothetical protein	NA	NA	NA	NA	NA
QBI88628.1|4858521_4859502_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 1
CP036373	Klebsiella pneumoniae strain WCHKP020037 plasmid p1_020037, complete sequence	108291	0	107504	108291	capsid,terminase,tail,integrase	Salmonella_phage(90.82%)	116	88821:88842	106617:106638
QBI89647.1|256_469_+	hypothetical protein	NA	J9Q7S8	Salmonella_phage	80.0	4.3e-28
QBI89648.1|921_2019_-	RepB family plasmid replication initiator protein	NA	J9Q7H0	Salmonella_phage	47.3	1.2e-73
QBI89649.1|2030_2243_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89650.1|2339_2984_+	hypothetical protein	NA	J9Q739	Salmonella_phage	80.7	4.9e-99
QBI89651.1|3289_3919_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89652.1|4113_4542_-	DUF2513 domain-containing protein	NA	NA	NA	NA	NA
QBI89653.1|4936_6022_+	exonuclease SbcCD subunit D	NA	J9Q7S9	Salmonella_phage	84.2	1.2e-182
QBI89761.1|6060_6255_+	hypothetical protein	NA	J9Q7H1	Salmonella_phage	66.1	2.8e-18
QBI89654.1|6251_8168_+	exonuclease	NA	J9Q741	Salmonella_phage	84.8	3.3e-300
QBI89655.1|8157_8904_+	hypothetical protein	NA	J9Q6J5	Salmonella_phage	59.7	1.2e-77
QBI89656.1|8913_9483_+	hypothetical protein	NA	J9Q7Z7	Salmonella_phage	90.5	3.8e-95
QBI89657.1|9558_11862_+	ribonucleoside-diphosphate reductase subunit alpha	NA	J9Q7T0	Salmonella_phage	90.9	0.0e+00
QBI89658.1|11992_13135_+	ribonucleotide-diphosphate reductase subunit beta	NA	J9Q7H3	Salmonella_phage	95.8	9.0e-213
QBI89659.1|13212_14088_+	phosphoribosyl-ATP pyrophosphohydrolase	NA	J9Q742	Salmonella_phage	84.7	4.5e-140
QBI89660.1|14281_15385_+	thymidylate synthase	NA	J9Q6J6	Salmonella_phage	79.8	2.5e-180
QBI89661.1|15386_15800_+	hypothetical protein	NA	J9Q7Z8	Salmonella_phage	76.6	2.3e-54
QBI89662.1|15796_16273_+	dihydrofolate reductase	NA	J9Q7T1	Salmonella_phage	79.6	6.4e-72
QBI89663.1|16272_16917_+	hypothetical protein	NA	J9Q7H4	Salmonella_phage	77.1	2.3e-93
QBI89664.1|16980_17400_+	hypothetical protein	NA	J9Q743	Salmonella_phage	74.1	6.5e-52
QBI89665.1|17409_17967_+	3'-5' exonuclease	NA	J9Q6J8	Salmonella_phage	84.2	1.4e-86
QBI89666.1|18092_18926_+	hypothetical protein	NA	J9Q7Z9	Salmonella_phage	56.7	2.3e-64
QBI89667.1|19110_19704_+	phage N-6-adenine-methyltransferase	NA	J9Q7T2	Salmonella_phage	85.3	5.9e-99
QBI89668.1|19901_20135_+	hypothetical protein	NA	J9Q7H5	Salmonella_phage	84.2	2.7e-31
QBI89669.1|20707_21295_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	79.7	5.8e-91
QBI89670.1|21726_22005_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89671.1|22001_22190_+	hypothetical protein	NA	J9Q800	Salmonella_phage	52.5	3.3e-08
QBI89672.1|22292_22718_+	tellurite/colicin resistance protein	NA	Q71TK7	Escherichia_phage	80.9	7.5e-56
QBI89673.1|22717_22873_+	DUF3927 domain-containing protein	NA	H6WZJ7	Escherichia_phage	61.2	1.7e-05
QBI89674.1|23000_23579_+	hypothetical protein	NA	J9Q7H6	Salmonella_phage	56.0	1.9e-54
QBI89675.1|23707_25393_+	DUF4942 domain-containing protein	NA	J9Q747	Salmonella_phage	91.1	0.0e+00
QBI89676.1|25454_26183_+	hypothetical protein	NA	J9Q6K2	Salmonella_phage	70.2	3.1e-78
QBI89677.1|26333_26597_+	hypothetical protein	NA	J9Q7T5	Salmonella_phage	71.6	9.7e-30
QBI89678.1|26784_27072_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89679.1|27288_27606_+	hypothetical protein	NA	J9Q750	Salmonella_phage	74.3	1.2e-42
QBI89680.1|27688_28525_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
QBI89681.1|28597_29113_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89682.1|29643_29901_-	hypothetical protein	NA	J9Q7T6	Salmonella_phage	70.0	1.6e-13
QBI89683.1|30721_30940_+	hypothetical protein	NA	J9Q6K7	Salmonella_phage	80.6	4.9e-27
QBI89684.1|30952_31165_+	hypothetical protein	NA	J9Q804	Salmonella_phage	77.9	4.4e-25
QBI89685.1|31301_31613_+	hypothetical protein	NA	J9Q7T7	Salmonella_phage	66.0	4.0e-30
QBI89686.1|31732_32140_+	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	45.0	2.8e-23
QBI89687.1|32266_32548_+	ABC transporter	NA	J9Q753	Salmonella_phage	82.8	2.0e-41
QBI89688.1|32753_33236_+	hypothetical protein	NA	J9Q805	Salmonella_phage	71.2	2.6e-65
QBI89689.1|33829_34033_-	hypothetical protein	NA	J9Q7I3	Salmonella_phage	95.5	4.1e-28
QBI89690.1|34083_34734_-	hypothetical protein	NA	J9Q754	Salmonella_phage	91.7	8.4e-107
QBI89691.1|35055_35364_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89692.1|35367_35898_-	transcriptional regulator	NA	J9Q6L0	Salmonella_phage	85.1	9.3e-72
QBI89693.1|36053_36491_+	hypothetical protein	NA	A0A1V0E8D6	Vibrio_phage	37.0	9.5e-14
QBI89694.1|36541_36817_-	hypothetical protein	NA	J9Q7T9	Salmonella_phage	68.1	4.0e-26
QBI89695.1|36819_38379_-	DEAD/DEAH box helicase	NA	J9Q7I4	Salmonella_phage	93.1	3.1e-280
QBI89762.1|38462_39143_+	chromosome partitioning protein ParB	NA	J9Q756	Salmonella_phage	88.8	6.7e-107
QBI89696.1|39142_39811_+	chromosome partitioning protein ParB	NA	J9Q6L1	Salmonella_phage	91.9	6.6e-107
QBI89697.1|39807_40449_+	ATP-binding cassette domain-containing protein	NA	J9Q807	Salmonella_phage	97.2	2.3e-109
QBI89698.1|40438_40990_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89699.1|40986_41877_+	hypothetical protein	NA	J9Q7I6	Salmonella_phage	97.0	5.4e-165
QBI89700.1|41886_42153_+	hypothetical protein	NA	J9Q757	Salmonella_phage	90.9	1.3e-37
QBI89701.1|42328_42970_+	DNA-binding protein	NA	J9Q6D4	Salmonella_phage	88.2	6.6e-96
QBI89702.1|42972_44229_+|terminase	terminase	terminase	J9Q7Y2	Salmonella_phage	97.4	9.4e-248
QBI89703.1|44261_45836_+	hypothetical protein	NA	J9Q7R1	Salmonella_phage	88.7	1.3e-275
QBI89704.1|45858_46758_+	hypothetical protein	NA	J9Q7F4	Salmonella_phage	82.6	1.0e-123
QBI89705.1|46784_47663_+|capsid	phage major capsid protein	capsid	J9Q710	Salmonella_phage	94.2	4.7e-153
QBI89706.1|47741_48170_+	Ig domain-containing protein	NA	J9Q6D6	Salmonella_phage	71.6	7.9e-29
QBI89707.1|48217_48652_+	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	84.0	2.9e-63
QBI89708.1|48651_49485_+	hypothetical protein	NA	J9Q7R2	Salmonella_phage	83.4	4.8e-131
QBI89709.1|49582_49927_+	hypothetical protein	NA	J9Q7F6	Salmonella_phage	92.1	7.4e-54
QBI89710.1|49917_50391_+	hypothetical protein	NA	J9Q711	Salmonella_phage	93.6	1.9e-76
QBI89711.1|50392_50785_+	hypothetical protein	NA	J9Q6D8	Salmonella_phage	67.5	1.0e-46
QBI89712.1|50852_51599_+	Ig domain-containing protein	NA	J9Q7Y4	Salmonella_phage	83.4	1.6e-106
QBI89713.1|51660_51978_+	hypothetical protein	NA	J9Q7R3	Salmonella_phage	93.3	1.8e-46
QBI89714.1|52094_52328_+	hypothetical protein	NA	J9Q7F7	Salmonella_phage	93.5	3.4e-34
QBI89715.1|52335_56868_+|tail	phage tail tape measure protein	tail	J9Q712	Salmonella_phage	71.5	0.0e+00
QBI89716.1|56911_57247_+|tail	phage tail protein	tail	J9Q6E1	Salmonella_phage	84.5	3.4e-51
QBI89717.1|57333_58032_+|tail	phage minor tail protein L	tail	J9Q7Y5	Salmonella_phage	87.4	1.2e-122
QBI89718.1|58024_58822_+|tail	phage tail protein	tail	J9Q7R4	Salmonella_phage	84.9	1.6e-139
QBI89719.1|58809_59421_+|tail	tail assembly protein	tail	J9Q7F8	Salmonella_phage	72.1	1.1e-76
QBI89720.1|59437_71608_+	DUF1983 domain-containing protein	NA	J9Q713	Salmonella_phage	56.8	2.7e-28
QBI89721.1|71660_73151_+|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	43.4	4.0e-72
QBI89722.1|73247_73571_+	hypothetical protein	NA	J9Q6E7	Salmonella_phage	95.3	2.3e-49
QBI89723.1|73584_74277_+	hypothetical protein	NA	J9Q7Y7	Salmonella_phage	89.1	9.2e-120
QBI89724.1|74279_74531_+	hypothetical protein	NA	J9Q7R6	Salmonella_phage	71.1	6.4e-23
QBI89725.1|74733_75255_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89726.1|75494_76160_+	plasmid stability protein	NA	J9Q7R7	Salmonella_phage	83.7	2.9e-102
QBI89727.1|76159_76522_+	hypothetical protein	NA	J9Q7G3	Salmonella_phage	97.9	1.2e-43
QBI89728.1|76537_77302_+	DUF2971 domain-containing protein	NA	J9Q7Y9	Salmonella_phage	41.4	6.9e-52
QBI89729.1|77508_78234_+	hypothetical protein	NA	J9Q7R8	Salmonella_phage	88.8	2.5e-128
QBI89730.1|78298_79639_+	DNA helicase	NA	J9Q7G4	Salmonella_phage	95.7	1.6e-240
QBI89731.1|79791_80910_+	DNA primase	NA	J9Q720	Salmonella_phage	90.8	7.0e-202
QBI89732.1|80951_82118_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89733.1|82406_83195_+	hypothetical protein	NA	J9Q7Z0	Salmonella_phage	50.8	2.6e-70
QBI89734.1|83274_83742_+	hypothetical protein	NA	J9Q7R9	Salmonella_phage	63.9	3.4e-49
QBI89735.1|83741_85064_+	DNA ligase	NA	J9Q7G5	Salmonella_phage	85.2	1.6e-226
QBI89763.1|85063_85240_+	hypothetical protein	NA	J9Q729	Salmonella_phage	74.5	2.0e-15
QBI89736.1|85223_85439_+	hypothetical protein	NA	J9Q6I3	Salmonella_phage	78.6	8.5e-24
QBI89737.1|85435_85588_+	hypothetical protein	NA	J9Q7Z1	Salmonella_phage	84.0	7.1e-17
QBI89738.1|85584_85884_+	C-type natriuretic protein	NA	J9Q7S1	Salmonella_phage	66.7	6.7e-27
QBI89739.1|87142_88399_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89740.1|88514_89351_+	phosphate starvation-inducible protein PhoH	NA	W8D063	Erwinia_phage	65.4	1.8e-90
88821:88842	attL	AAAACCTTCCTGGCGACGGCCG	NA	NA	NA	NA
QBI89741.1|89360_89747_+	hypothetical protein	NA	Q716B1	Shigella_phage	72.0	3.7e-46
QBI89742.1|89743_89989_+	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	47.4	1.2e-13
QBI89743.1|90083_90701_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89744.1|90710_91121_+	toxin YafO	NA	NA	NA	NA	NA
QBI89745.1|91185_91545_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89746.1|91893_92994_+|integrase	integrase	integrase	A0A1P8DTG6	Proteus_phage	28.4	1.6e-17
QBI89747.1|92988_93369_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBI89748.1|93971_96251_+	porphyrin biosynthesis protein	NA	J9Q7G6	Salmonella_phage	62.3	3.0e-244
QBI89749.1|96347_97580_+	porphyrin biosynthesis protein	NA	J9Q733	Salmonella_phage	86.6	1.3e-212
QBI89750.1|97582_97786_+	hypothetical protein	NA	J9Q6I7	Salmonella_phage	80.6	7.2e-25
QBI89751.1|97760_101279_+	DNA polymerase III subunit alpha	NA	J9Q7Z2	Salmonella_phage	93.0	0.0e+00
QBI89752.1|101275_101719_+	hypothetical protein	NA	J9Q7S4	Salmonella_phage	83.7	6.8e-60
QBI89753.1|101772_102672_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89754.1|102725_103385_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89755.1|103595_104027_+	hypothetical protein	NA	J9Q6I8	Salmonella_phage	91.6	1.4e-65
QBI89756.1|104146_105154_+	regulator	NA	J9Q7Z3	Salmonella_phage	88.6	7.0e-145
QBI89757.1|105214_106159_+	exonuclease	NA	J9Q7S6	Salmonella_phage	93.0	1.4e-171
QBI89758.1|106158_106425_+	hypothetical protein	NA	J9Q7G8	Salmonella_phage	83.0	1.1e-33
QBI89759.1|106427_107504_+	recombinase	NA	J9Q736	Salmonella_phage	96.1	8.5e-197
106617:106638	attR	AAAACCTTCCTGGCGACGGCCG	NA	NA	NA	NA
>prophage 1
CP036372	Klebsiella pneumoniae strain WCHKP020037 plasmid pKPC2_020037, complete sequence	172770	1796	18519	172770	transposase,protease	Escherichia_phage(60.0%)	16	NA	NA
QBI89436.1|1796_2450_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBI89437.1|2542_2800_+	antitoxin PemI	NA	NA	NA	NA	NA
QBI89438.1|2801_3134_+	mRNA interferase PemK	NA	NA	NA	NA	NA
QBI89439.1|4444_5149_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89440.1|5659_6535_+	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
QBI89441.1|6614_7538_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	2.2e-177
QBI89442.1|9288_9993_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89443.1|11103_11808_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89444.1|11873_12392_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89445.1|12396_12813_-	fosfomycin resistance glutathione transferase FosA3	NA	Q2LI91	Bacillus_phage	35.6	2.0e-08
QBI89446.1|13198_13903_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89447.1|14580_14769_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89625.1|14860_15397_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	2.8e-84
QBI89448.1|15579_16440_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
QBI89449.1|16609_17365_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
QBI89450.1|17814_18519_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
>prophage 2
CP036372	Klebsiella pneumoniae strain WCHKP020037 plasmid pKPC2_020037, complete sequence	172770	73209	112303	172770	transposase,integrase	Escherichia_phage(36.84%)	41	76398:76412	101689:101703
QBI89511.1|73209_73914_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89512.1|75182_76064_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.2e-73
QBI89513.1|76339_77320_-|transposase	IS481-like element ISKpn27 family transposase	transposase	A8RHK4	Spiroplasma_virus	27.4	2.9e-10
76398:76412	attL	TCATGCCATTCCTTG	NA	NA	NA	NA
QBI89514.1|77442_77916_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	99.3	3.3e-76
QBI89515.1|77955_78660_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89516.1|79928_80810_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.2e-73
QBI89517.1|81085_82066_-|transposase	IS481-like element ISKpn27 family transposase	transposase	A8RHK4	Spiroplasma_virus	27.4	2.9e-10
QBI89518.1|82188_82662_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	99.3	3.3e-76
QBI89519.1|82701_83406_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89520.1|84717_85425_-	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI89521.1|85421_85658_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA	NA
QBI89522.1|85654_86017_-	mercury resistance co-regulator MerD	NA	NA	NA	NA	NA
QBI89523.1|86034_87729_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	8.8e-39
QBI89632.1|87780_88203_-	organomercurial transporter MerC	NA	NA	NA	NA	NA
QBI89524.1|88238_88514_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
QBI89525.1|88527_88878_-	mercuric ion transporter MerT	NA	NA	NA	NA	NA
QBI89526.1|88949_89384_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
QBI89527.1|89462_90467_+|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
QBI89528.1|92000_93023_-	DNA helicase UvrD	NA	NA	NA	NA	NA
QBI89529.1|93007_94570_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
QBI89530.1|94643_95060_-	PIN domain-containing protein	NA	NA	NA	NA	NA
QBI89633.1|95056_95287_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
QBI89531.1|95270_95705_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89532.1|95865_96810_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89634.1|96888_97239_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89635.1|97296_97818_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89533.1|97863_98067_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89534.1|98096_99101_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89535.1|99284_100064_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.0	5.4e-52
QBI89536.1|100109_100367_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89537.1|101144_102011_+	RepB family plasmid replication initiator protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
101689:101703	attR	TCATGCCATTCCTTG	NA	NA	NA	NA
QBI89538.1|103120_104326_+	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
QBI89539.1|104322_105300_+	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	53.8	1.4e-86
QBI89540.1|105381_106653_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
QBI89541.1|106652_107084_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
QBI89542.1|107242_107494_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89543.1|107493_108978_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI89544.1|109226_110198_+	StbA family protein	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
QBI89545.1|110200_110872_+	Mediator of plasmid stability	NA	NA	NA	NA	NA
QBI89546.1|110934_111165_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89547.1|111601_112303_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
>prophage 3
CP036372	Klebsiella pneumoniae strain WCHKP020037 plasmid pKPC2_020037, complete sequence	172770	135758	164286	172770	transposase	Escherichia_phage(27.78%)	35	NA	NA
QBI89581.1|135758_136463_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89582.1|136588_136963_-	hypothetical protein	NA	A0A248SL90	Klebsiella_phage	62.7	2.2e-27
QBI89583.1|137588_137948_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89584.1|138009_138333_-	theronine dehydrogenase	NA	I3UM57	Rhodobacter_phage	38.1	6.0e-13
QBI89585.1|138329_139058_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
QBI89586.1|139054_139486_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
QBI89587.1|141608_141839_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
QBI89588.1|142816_143077_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	46.2	4.1e-12
QBI89589.1|143263_143455_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89590.1|143497_144004_-	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
QBI89591.1|144408_145188_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89592.1|145241_145661_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
QBI89593.1|145671_145893_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89594.1|145892_146570_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
QBI89595.1|146928_147600_+	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
QBI89596.1|147779_148202_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
QBI89597.1|148201_149473_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
QBI89598.1|149608_150580_-	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
QBI89599.1|150576_151782_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
QBI89600.1|152144_152777_+	LacI family DNA-binding transcriptional regulator	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
QBI89601.1|152830_153031_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89602.1|153177_154128_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
QBI89603.1|154124_154736_-	DUF2913 family protein	NA	NA	NA	NA	NA
QBI89604.1|154732_155128_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89605.1|155641_156622_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
QBI89606.1|157273_157831_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89607.1|158299_159004_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89608.1|159136_159778_-	type A-2 chloramphenicol O-acetyltransferase CatII	NA	G3CFL0	Escherichia_phage	45.9	7.3e-55
QBI89609.1|159927_160428_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89610.1|160507_161212_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI89611.1|161245_161737_-	hypothetical protein	NA	NA	NA	NA	NA
QBI89612.1|161843_162581_+	resolvase	NA	NA	NA	NA	NA
QBI89613.1|162577_162802_+	hypothetical protein	NA	NA	NA	NA	NA
QBI89614.1|162923_163100_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
QBI89615.1|163281_164286_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
