assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002849735.1_ASM284973v1	CP017780	Amycolatopsis sp. BJA-103 chromosome, complete genome	1	4949558-4950804	1,1,1,2,2	CRISPRCasFinder,CRT,PILER-CR,CRISPRCasFinder,PILER-CR	no	cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,csa3,DEDDh,cas4,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,casR,RT	Type I-E	CGGATCATCCCCGCGCATGCGGGGAGCAC,CGGATCATCCCCGCGCATGCGGGGAGCAC,CGGATCATCCCCGCGCATGCGGGGAGCAC,CGGATCATCCCCGCGCATGCGGGGAGCAC,GGATCATCCCCGCGCATGCGGGGAGCAC	29,29,29,29,28	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E	18,20,14,18,14	20	TypeI-E	WYL,csa3,DEDDh,cas4,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,casR,RT	NA|490aa|up_9|CP017780.1_4933826_4935296_+,NA|158aa|up_8|CP017780.1_4935533_4936007_+,NA|79aa|up_7|CP017780.1_4936463_4936700_-,NA|457aa|up_6|CP017780.1_4937251_4938622_-,NA|70aa|down_7|CP017780.1_4960885_4961095_-	NA|490aa|up_9|CP017780.1_4933826_4935296_+	NA	NA|158aa|up_8|CP017780.1_4935533_4936007_+	NA	NA|79aa|up_7|CP017780.1_4936463_4936700_-	NA	NA|457aa|up_6|CP017780.1_4937251_4938622_-	NA	NA|538aa|up_5|CP017780.1_4938629_4940243_-	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]	NA|452aa|up_4|CP017780.1_4940239_4941595_-	PRK06917, PRK06917, aspartate aminotransferase family protein	NA|328aa|up_3|CP017780.1_4941591_4942575_-	pfam00498, FHA, FHA domain	NA|822aa|up_2|CP017780.1_4943002_4945468_-	sd00006, TPR, Tetratricopeptide repeat	NA|207aa|up_1|CP017780.1_4945470_4946091_-	COG3340, PepE, Peptidase E [Amino acid transport and metabolism]	NA|364aa|up_0|CP017780.1_4946325_4947417_-	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase	cas1|318aa|down_0|CP017780.1_4951284_4952238_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|224aa|down_1|CP017780.1_4952234_4952906_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|242aa|down_2|CP017780.1_4952908_4953634_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|379aa|down_3|CP017780.1_4953630_4954767_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|187aa|down_4|CP017780.1_4954775_4955336_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|551aa|down_5|CP017780.1_4955446_4957099_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|916aa|down_6|CP017780.1_4957186_4959934_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|70aa|down_7|CP017780.1_4960885_4961095_-	NA	NA|200aa|down_8|CP017780.1_4961884_4962484_-	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|812aa|down_9|CP017780.1_4962522_4964958_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional
GCA_002849735.1_ASM284973v1	CP017780	Amycolatopsis sp. BJA-103 chromosome, complete genome	2	4960208-4960781	3,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,csa3,DEDDh,cas4,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,casR,RT	Type I-E	GGATCATCCCCGCGCCTGCGGGGAGCAC,CGGATCATCCCCGCGCCTGCGGGGAGCAC,CGGATCATCCCCGCGCCTGCGGGGAGCAC	28,29,29	0	0	NA	NA	I-E:I-E:I-E	9,8,7	9	TypeI-E	WYL,csa3,DEDDh,cas4,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,casR,RT	NA,NA|70aa|down_0|CP017780.1_4960885_4961095_-,NA|130aa|down_4|CP017780.1_4967593_4967983_-,NA|82aa|down_5|CP017780.1_4968051_4968297_-,NA|92aa|down_7|CP017780.1_4969278_4969554_+,NA|65aa|down_9|CP017780.1_4970803_4970998_-	NA|822aa|up_9|CP017780.1_4943002_4945468_-	sd00006, TPR, Tetratricopeptide repeat	NA|207aa|up_8|CP017780.1_4945470_4946091_-	COG3340, PepE, Peptidase E [Amino acid transport and metabolism]	NA|364aa|up_7|CP017780.1_4946325_4947417_-	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase	cas1|318aa|up_6|CP017780.1_4951284_4952238_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|224aa|up_5|CP017780.1_4952234_4952906_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|242aa|up_4|CP017780.1_4952908_4953634_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|379aa|up_3|CP017780.1_4953630_4954767_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|187aa|up_2|CP017780.1_4954775_4955336_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|551aa|up_1|CP017780.1_4955446_4957099_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|916aa|up_0|CP017780.1_4957186_4959934_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|70aa|down_0|CP017780.1_4960885_4961095_-	NA	NA|200aa|down_1|CP017780.1_4961884_4962484_-	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|812aa|down_2|CP017780.1_4962522_4964958_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|859aa|down_3|CP017780.1_4965017_4967594_-	pfam12846, AAA_10, AAA-like domain	NA|130aa|down_4|CP017780.1_4967593_4967983_-	NA	NA|82aa|down_5|CP017780.1_4968051_4968297_-	NA	NA|305aa|down_6|CP017780.1_4968307_4969222_-	pfam12642, TpcC, Conjugative transposon protein TcpC	NA|92aa|down_7|CP017780.1_4969278_4969554_+	NA	NA|281aa|down_8|CP017780.1_4969593_4970436_-	pfam13613, HTH_Tnp_4, Helix-turn-helix of DDE superfamily endonuclease	NA|65aa|down_9|CP017780.1_4970803_4970998_-	NA
GCA_002849735.1_ASM284973v1	CP017780	Amycolatopsis sp. BJA-103 chromosome, complete genome	5	8587490-8587622	4	PILER-CR	no		WYL,csa3,DEDDh,cas4,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,casR,RT	Orphan	GCGGATCGCGTTTAGCCCGCTAAAGGCGACGC	32	1	1	8587593-8587610	CP017780.1_4535308-4535291	NA	2	2	Orphan	WYL,csa3,DEDDh,cas4,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,casR,RT	NA|109aa|up_0|CP017780.1_8587145_8587472_+,NA|79aa|down_3|CP017780.1_8590995_8591232_-,NA|77aa|down_5|CP017780.1_8592671_8592902_+,NA|310aa|down_8|CP017780.1_8595814_8596744_-	NA|248aa|up_9|CP017780.1_8580986_8581730_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|145aa|up_8|CP017780.1_8581801_8582236_+	cd08865, SRPBCC_10, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|266aa|up_7|CP017780.1_8582271_8583069_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|103aa|up_6|CP017780.1_8583128_8583437_+	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only]	NA|113aa|up_5|CP017780.1_8583426_8583765_+	COG2361, COG2361, Uncharacterized conserved protein [Function unknown]	NA|305aa|up_4|CP017780.1_8583837_8584752_+	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|167aa|up_3|CP017780.1_8584745_8585246_-	cd02215, cupin_QDO_N_C, quercetinase, N- and C-terminal cupin domains	NA|166aa|up_2|CP017780.1_8585310_8585808_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|293aa|up_1|CP017780.1_8585867_8586746_-	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain	NA|109aa|up_0|CP017780.1_8587145_8587472_+	NA	NA|249aa|down_0|CP017780.1_8587997_8588744_-	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms	NA|340aa|down_1|CP017780.1_8588907_8589927_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|341aa|down_2|CP017780.1_8589968_8590991_+	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|79aa|down_3|CP017780.1_8590995_8591232_-	NA	NA|413aa|down_4|CP017780.1_8591365_8592604_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|77aa|down_5|CP017780.1_8592671_8592902_+	NA	NA|471aa|down_6|CP017780.1_8592981_8594394_+	cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases	NA|420aa|down_7|CP017780.1_8594478_8595738_+	smart00631, Zn_pept, Zn_pept domain	NA|310aa|down_8|CP017780.1_8595814_8596744_-	NA	NA|257aa|down_9|CP017780.1_8596939_8597710_-	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed
