assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	1	1036472-1036988	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,29,28	0	0	NA	NA	I-E:I-E:I-E	8,8,6	8	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|CP024131.1_1035181_1035322_-,NA	NA|434aa|up_9|CP024131.1_1025878_1027180_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|CP024131.1_1027227_1029462_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|CP024131.1_1029539_1029788_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|CP024131.1_1029787_1030123_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|CP024131.1_1030193_1030985_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|CP024131.1_1031212_1032850_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|CP024131.1_1032937_1034236_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|CP024131.1_1034295_1035168_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|CP024131.1_1035181_1035322_-	NA	NA|224aa|up_0|CP024131.1_1035460_1036132_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|CP024131.1_1037626_1039105_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|262aa|down_1|CP024131.1_1041504_1042290_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_2|CP024131.1_1042359_1043814_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_3|CP024131.1_1043907_1045245_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_4|CP024131.1_1045222_1046002_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_5|CP024131.1_1045998_1046859_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_6|CP024131.1_1047006_1047582_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_7|CP024131.1_1047598_1047859_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_8|CP024131.1_1047849_1049121_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|down_9|CP024131.1_1049198_1049564_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	2	1065404-1066469	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	15,17,17	17	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|34aa|up_7|CP024131.1_1058530_1058632_+,NA	cas3|889aa|up_9|CP024131.1_1054557_1057224_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|405aa|up_8|CP024131.1_1057351_1058565_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|34aa|up_7|CP024131.1_1058530_1058632_+	NA	cas8e|503aa|up_6|CP024131.1_1058951_1060460_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|CP024131.1_1060452_1060935_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|130aa|up_4|CP024131.1_1060947_1061337_+	cd09646, Cas7_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|225aa|up_3|CP024131.1_1062818_1063493_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|CP024131.1_1063479_1064079_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|CP024131.1_1064094_1065012_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|CP024131.1_1065013_1065298_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|CP024131.1_1066489_1067527_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP024131.1_1067778_1068687_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|CP024131.1_1068688_1070116_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP024131.1_1070115_1070721_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|CP024131.1_1070770_1071094_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP024131.1_1071287_1071599_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP024131.1_1071617_1072328_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP024131.1_1072327_1072807_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP024131.1_1072803_1073853_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP024131.1_1073833_1074595_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	3	1542727-1542844	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|300aa|up_9|CP024131.1_1532210_1533110_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|CP024131.1_1533302_1534493_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|CP024131.1_1534489_1535749_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|CP024131.1_1535738_1537367_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|CP024131.1_1537639_1538998_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|CP024131.1_1539002_1540079_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|69aa|up_3|CP024131.1_1540120_1540327_-	PRK09729, PRK09729, hypothetical protein; Provisional	NA|217aa|up_2|CP024131.1_1540541_1541192_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|CP024131.1_1541245_1541500_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|CP024131.1_1541499_1542630_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|CP024131.1_1542863_1545149_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|CP024131.1_1545844_1549597_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|CP024131.1_1549724_1550447_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|CP024131.1_1550593_1553221_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|CP024131.1_1553369_1555058_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|CP024131.1_1555054_1555678_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1535aa|down_6|CP024131.1_1555611_1560216_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|CP024131.1_1560216_1561866_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|CP024131.1_1561870_1562647_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|CP024131.1_1562720_1563905_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	4	2289955-2290078	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|75aa|down_7|CP024131.1_2298663_2298888_-,NA|30aa|down_8|CP024131.1_2298974_2299064_+	NA|471aa|up_9|CP024131.1_2279408_2280821_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|CP024131.1_2281377_2281587_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|CP024131.1_2282042_2282669_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|CP024131.1_2282689_2284792_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|CP024131.1_2284795_2285443_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|CP024131.1_2285506_2286175_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|CP024131.1_2286171_2286957_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|CP024131.1_2286960_2287773_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|CP024131.1_2287784_2289389_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|CP024131.1_2289514_2289820_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|CP024131.1_2290392_2291649_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|CP024131.1_2291689_2293063_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|CP024131.1_2293277_2293919_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|CP024131.1_2293958_2295107_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|CP024131.1_2295397_2296609_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|CP024131.1_2296721_2297654_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|CP024131.1_2297650_2298676_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|75aa|down_7|CP024131.1_2298663_2298888_-	NA	NA|30aa|down_8|CP024131.1_2298974_2299064_+	NA	NA|390aa|down_9|CP024131.1_2299229_2300399_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	6	3445870-3446014	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|65aa|up_8|CP024131.1_3438229_3438424_-,NA|47aa|up_5|CP024131.1_3440738_3440879_-,NA	NA|351aa|up_9|CP024131.1_3437027_3438080_-	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair]	NA|65aa|up_8|CP024131.1_3438229_3438424_-	NA	NA|361aa|up_7|CP024131.1_3438998_3440081_+	PRK10554, PRK10554, outer membrane porin protein C; Provisional	NA|128aa|up_6|CP024131.1_3440269_3440653_-	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|47aa|up_5|CP024131.1_3440738_3440879_-	NA	NA|121aa|up_4|CP024131.1_3440875_3441238_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|128aa|up_3|CP024131.1_3441444_3441828_-	PHA01519, PHA01519, hypothetical protein	NA|405aa|up_2|CP024131.1_3441951_3443165_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|357aa|up_1|CP024131.1_3443315_3444386_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|CP024131.1_3444520_3445804_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|CP024131.1_3446037_3448299_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|CP024131.1_3448481_3449915_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|CP024131.1_3449990_3451043_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|CP024131.1_3451226_3452180_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|CP024131.1_3452220_3453216_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|CP024131.1_3453370_3454189_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|CP024131.1_3454189_3455248_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|CP024131.1_3455250_3455940_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|CP024131.1_3455939_3456713_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|CP024131.1_3456878_3457028_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	7	3689211-3689307	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|CP024131.1_3681006_3681699_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|CP024131.1_3681918_3682461_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|CP024131.1_3682931_3683798_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|CP024131.1_3683799_3684012_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|CP024131.1_3684119_3684641_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|CP024131.1_3684676_3686062_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|CP024131.1_3686235_3686730_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|CP024131.1_3686732_3687455_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|CP024131.1_3687572_3688082_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|CP024131.1_3688078_3689146_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|CP024131.1_3689340_3690234_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|CP024131.1_3690230_3691046_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|CP024131.1_3691056_3692316_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|CP024131.1_3692325_3693993_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|412aa|down_4|CP024131.1_3695411_3696647_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_5|CP024131.1_3696657_3697443_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_6|CP024131.1_3697670_3698816_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_7|CP024131.1_3698837_3700139_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_8|CP024131.1_3700195_3701557_-	PRK08044, PRK08044, allantoinase AllB	NA|485aa|down_9|CP024131.1_3701616_3703071_-	PRK11375, PRK11375, putative allantoin permease
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	8	3899164-3899306	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|82aa|up_4|CP024131.1_3893598_3893844_-,NA|272aa|up_3|CP024131.1_3894256_3895072_-,NA|78aa|down_4|CP024131.1_3904506_3904740_-,NA|62aa|down_9|CP024131.1_3909123_3909309_+	NA|390aa|up_9|CP024131.1_3888066_3889236_-	PRK12351, PRK12351, methylcitrate synthase; Provisional	NA|297aa|up_8|CP024131.1_3889675_3890566_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|529aa|up_7|CP024131.1_3890804_3892391_+	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional	NA|92aa|up_6|CP024131.1_3892488_3892764_-	PRK09929, PRK09929, hypothetical protein; Provisional	NA|224aa|up_5|CP024131.1_3892910_3893582_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|82aa|up_4|CP024131.1_3893598_3893844_-	NA	NA|272aa|up_3|CP024131.1_3894256_3895072_-	NA	NA|350aa|up_2|CP024131.1_3895314_3896364_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|461aa|up_1|CP024131.1_3896740_3898123_-	PRK06846, PRK06846, putative deaminase; Validated	NA|317aa|up_0|CP024131.1_3898132_3899083_-	PRK12352, PRK12352, putative carbamate kinase; Reviewed	NA|473aa|down_0|CP024131.1_3899318_3900737_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|516aa|down_1|CP024131.1_3900736_3902284_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|279aa|down_2|CP024131.1_3903077_3903914_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|202aa|down_3|CP024131.1_3903953_3904559_-	sd00045, ANK, ankyrin repeats	NA|78aa|down_4|CP024131.1_3904506_3904740_-	NA	NA|166aa|down_5|CP024131.1_3904816_3905314_+	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|311aa|down_6|CP024131.1_3905405_3906338_+	PRK10094, PRK10094, HTH-type transcriptional activator AllS	NA|363aa|down_7|CP024131.1_3906379_3907468_-	smart00052, EAL, Putative diguanylate phosphodiesterase	NA|425aa|down_8|CP024131.1_3907803_3909077_-	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|62aa|down_9|CP024131.1_3909123_3909309_+	NA
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	9	4185549-4185690	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|60aa|down_1|CP024131.1_4186149_4186329_+	NA|96aa|up_9|CP024131.1_4174541_4174829_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|CP024131.1_4174825_4176112_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|CP024131.1_4176162_4177104_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|248aa|up_6|CP024131.1_4177118_4177862_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|CP024131.1_4178360_4179875_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|CP024131.1_4179905_4181048_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|CP024131.1_4181176_4182394_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|CP024131.1_4182467_4184021_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|CP024131.1_4184129_4184915_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|CP024131.1_4184920_4185511_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|CP024131.1_4185719_4186115_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|60aa|down_1|CP024131.1_4186149_4186329_+	NA	NA|1074aa|down_2|CP024131.1_4186376_4189598_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_3|CP024131.1_4189615_4190764_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_4|CP024131.1_4191219_4192041_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|317aa|down_5|CP024131.1_4193187_4194138_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|CP024131.1_4194139_4194589_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|CP024131.1_4194713_4195208_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|CP024131.1_4195207_4198024_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|CP024131.1_4198066_4199008_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCA_002855415.1_ASM285541v1	CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	10	4249661-4249816	10	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA	55	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|60aa|down_9|CP024131.1_4258054_4258234_+	NA|323aa|up_9|CP024131.1_4239443_4240412_-	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|215aa|up_8|CP024131.1_4240517_4241162_+	PRK11246, PRK11246, YtjB family periplasmic protein	NA|339aa|up_7|CP024131.1_4241189_4242206_+	PRK03822, lplA, lipoate-protein ligase A; Provisional	NA|88aa|up_6|CP024131.1_4242237_4242501_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|240aa|up_5|CP024131.1_4242661_4243381_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|408aa|up_4|CP024131.1_4243437_4244661_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|441aa|up_3|CP024131.1_4244712_4246035_-	PRK05820, deoA, thymidine phosphorylase; Reviewed	NA|260aa|up_2|CP024131.1_4246161_4246941_-	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional	NA|517aa|up_1|CP024131.1_4247198_4248749_+	PRK10977, PRK10977, hypothetical protein; Provisional	NA|288aa|up_0|CP024131.1_4248720_4249584_+	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|261aa|down_0|CP024131.1_4249898_4250681_-	PRK11449, PRK11449, metal-dependent hydrolase	NA|358aa|down_1|CP024131.1_4250677_4251751_-	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|60aa|down_2|CP024131.1_4251872_4252052_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|202aa|down_3|CP024131.1_4252160_4252766_-	PRK10568, PRK10568, molecular chaperone OsmY	NA|529aa|down_4|CP024131.1_4253158_4254745_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|83aa|down_5|CP024131.1_4254964_4255213_+	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional	NA|191aa|down_6|CP024131.1_4255320_4255893_-	pfam03498, CDtoxinA, Cytolethal distending toxin A/C domain	NA|274aa|down_7|CP024131.1_4255889_4256711_-	PRK15251, PRK15251, cytolethal distending toxin subunit B family protein	NA|238aa|down_8|CP024131.1_4256707_4257421_-	pfam03498, CDtoxinA, Cytolethal distending toxin A/C domain	NA|60aa|down_9|CP024131.1_4258054_4258234_+	NA
