The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	1106508	1169404	4805333	integrase,capsid,tail,plate,head,portal,tRNA	Salmonella_phage(93.02%)	64	1106344:1106391	1140416:1140463
1106344:1106391	attL	ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AUM30211.1|1106508_1107534_-|integrase	integrase	integrase	A0A1S6L016	Salmonella_phage	100.0	9.9e-203
AUM30212.1|1107537_1108170_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	99.5	7.4e-116
AUM30213.1|1108289_1108532_+	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	100.0	1.1e-38
AUM30214.1|1108564_1109074_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	100.0	1.6e-89
AUM33689.1|1109081_1109282_+	hypothetical protein	NA	A0A1S6L005	Salmonella_phage	100.0	3.2e-33
AUM30215.1|1109245_1109587_+	hypothetical protein	NA	A0A1S6L019	Salmonella_phage	100.0	2.1e-56
AUM30216.1|1109654_1109888_+	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	100.0	9.8e-34
AUM30217.1|1109887_1110115_+	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	97.3	5.4e-37
AUM30218.1|1110111_1110696_+	DNA polymerase III subunit epsilon	NA	A0A1S6L012	Salmonella_phage	99.0	1.6e-109
AUM30219.1|1110692_1111550_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	99.3	4.9e-163
AUM30220.1|1111540_1113949_+	endonuclease	NA	A0A1S6L028	Salmonella_phage	97.6	0.0e+00
AUM30221.1|1113968_1114196_-	hypothetical protein	NA	NA	NA	NA	NA
AUM30222.1|1114333_1114522_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	91.7	5.7e-24
AUM30223.1|1114621_1114885_+	hypothetical protein	NA	NA	NA	NA	NA
AUM30224.1|1114869_1116534_+	abortive phage infection protein	NA	E5G6M2	Salmonella_phage	100.0	0.0e+00
AUM30225.1|1116637_1117681_-|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	99.7	7.9e-200
AUM30226.1|1117677_1119444_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	97.4	0.0e+00
AUM30227.1|1119586_1120420_+|capsid	capsid protein	capsid	E5G6M5	Salmonella_phage	99.6	1.5e-129
AUM30228.1|1120436_1121498_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	100.0	2.1e-195
AUM30229.1|1121501_1122152_+	hypothetical protein	NA	E5G6M7	Salmonella_phage	100.0	4.9e-115
AUM30230.1|1122245_1122710_+|head	head completion/stabilization protein	head	E5G6M8	Salmonella_phage	98.1	5.4e-84
AUM30231.1|1122709_1122913_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AUM30232.1|1122916_1123132_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
AUM33690.1|1123151_1123628_+	glycoside hydrolase	NA	E5G6N1	Salmonella_phage	98.7	1.4e-87
AUM30233.1|1123624_1124053_+	hypothetical protein	NA	E5G6N2	Salmonella_phage	92.9	4.1e-62
AUM30234.1|1124148_1124580_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	94.4	4.4e-72
AUM30235.1|1124572_1125022_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	85.7	1.1e-62
AUM30236.1|1125033_1126479_-	hypothetical protein	NA	NA	NA	NA	NA
AUM30237.1|1126558_1127137_+|plate	baseplate assembly protein	plate	A0A1S6KZX7	Salmonella_phage	93.2	3.6e-101
AUM30238.1|1127133_1127493_+|plate	baseplate assembly protein	plate	E5G6N7	Salmonella_phage	95.0	6.8e-58
AUM30239.1|1127479_1128388_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	99.7	3.5e-159
AUM30240.1|1128380_1128986_+|tail	phage tail protein I	tail	E5G6N9	Salmonella_phage	100.0	1.3e-117
AUM30241.1|1128982_1130782_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	68.0	3.2e-204
AUM30242.1|1131348_1131888_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	99.4	8.5e-97
AUM30243.1|1131890_1132757_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	99.6	2.3e-160
AUM30244.1|1132786_1133344_+	DNA-invertase	NA	A0A1S6L009	Salmonella_phage	98.4	5.5e-99
AUM30245.1|1133446_1134619_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	99.7	5.7e-223
AUM30246.1|1134628_1135144_+|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	98.8	7.9e-92
AUM30247.1|1135198_1135501_+	hypothetical protein	NA	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
AUM30248.1|1135515_1135635_+|tail	phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
AUM30249.1|1135627_1138435_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.5	0.0e+00
AUM30250.1|1138431_1138917_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	98.5	1.4e-66
AUM30251.1|1138913_1140014_+	late control protein D	NA	E5G6Q3	Salmonella_phage	96.2	8.1e-195
AUM30252.1|1140082_1140301_+	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	100.0	2.1e-38
AUM33691.1|1140852_1142016_-	secretion protein HlyD	NA	NA	NA	NA	NA
1140416:1140463	attR	ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AUM30253.1|1142023_1144204_-	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	9.9e-19
AUM30254.1|1144200_1145610_-	type I secretion protein TolC	NA	NA	NA	NA	NA
AUM30255.1|1145674_1157149_-	Ig-like domain repeat protein	NA	NA	NA	NA	NA
AUM33692.1|1157763_1158246_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
AUM30256.1|1158395_1158872_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AUM33693.1|1158876_1159152_+	RnfH family protein	NA	NA	NA	NA	NA
AUM30257.1|1159313_1159652_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AUM30258.1|1159800_1161462_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AUM30259.1|1161547_1162426_-	NAD(+) kinase	NA	NA	NA	NA	NA
AUM30260.1|1162422_1162584_-	inorganic polyphosphate kinase	NA	NA	NA	NA	NA
AUM30261.1|1162548_1163139_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AUM30262.1|1163173_1163779_-	cytoplasmic protein	NA	NA	NA	NA	NA
AUM30263.1|1163899_1165141_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AUM30264.1|1165205_1165997_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AUM30265.1|1165942_1166239_-	hypothetical protein	NA	NA	NA	NA	NA
AUM30266.1|1166162_1167524_+	signal recognition particle protein	NA	NA	NA	NA	NA
AUM33695.1|1167776_1168025_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AUM33694.1|1168043_1168592_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AUM30267.1|1168636_1169404_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 2
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	1665788	1674960	4805333	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AUM30702.1|1665788_1666736_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
AUM30703.1|1666719_1667451_+	osmoprotectant uptake system permease	NA	NA	NA	NA	NA
AUM30704.1|1667431_1667539_-	hypothetical protein	NA	NA	NA	NA	NA
AUM30705.1|1667598_1668330_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AUM30706.1|1668552_1670238_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
AUM30707.1|1670234_1670954_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUM30708.1|1671000_1671468_+	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AUM30709.1|1671524_1672055_-	hypothetical protein	NA	NA	NA	NA	NA
AUM30710.1|1672226_1672685_-	hypothetical protein	NA	Q9EYF5	Enterobacteria_phage	73.2	7.6e-54
AUM30711.1|1672926_1674960_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 3
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	1742187	1748484	4805333		Enterobacteria_phage(50.0%)	6	NA	NA
AUM30766.1|1742187_1743591_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	28.2	4.0e-21
AUM30767.1|1743768_1744662_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AUM30768.1|1745038_1746124_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.2	4.2e-103
AUM30769.1|1746123_1747023_+	NAD(P)-dependent oxidoreductase	NA	A0A291LA50	Escherichia_phage	36.3	1.4e-30
AUM33710.1|1747070_1747949_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	64.1	3.9e-107
AUM30770.1|1747953_1748484_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.1	3.7e-52
>prophage 4
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	1824491	1890352	4805333	integrase,capsid,tail,plate,holin,portal,terminase	Salmonella_phage(75.41%)	78	1833601:1833616	1871908:1871923
AUM33715.1|1824491_1824647_-|integrase	integrase	integrase	NA	NA	NA	NA
AUM30843.1|1825498_1826881_+	lysine decarboxylase	NA	NA	NA	NA	NA
AUM30844.1|1826915_1828412_+	AMP-binding protein	NA	NA	NA	NA	NA
AUM30845.1|1828534_1829485_+	EamA family transporter	NA	NA	NA	NA	NA
AUM30846.1|1829572_1830568_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AUM30847.1|1830717_1831596_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
1833601:1833616	attL	CAATTTCGCCGGATGC	NA	NA	NA	NA
AUM30848.1|1833948_1835406_+	MATE family multidrug exporter	NA	NA	NA	NA	NA
AUM30849.1|1836502_1836829_+	acyl carrier protein	NA	NA	NA	NA	NA
AUM30850.1|1836817_1836979_-	cytoplasmic protein	NA	NA	NA	NA	NA
AUM30851.1|1837024_1838479_+	AMP nucleosidase	NA	NA	NA	NA	NA
AUM30852.1|1839833_1840631_-	protein MtfA	NA	NA	NA	NA	NA
AUM30853.1|1840922_1841912_-|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	100.0	8.6e-196
AUM33716.1|1841913_1842141_-	hypothetical protein	NA	Q8HAA9	Salmonella_phage	100.0	3.2e-37
AUM30854.1|1842180_1842750_-	exonuclease	NA	A0A192Y6E0	Salmonella_phage	100.0	7.1e-110
AUM30855.1|1842753_1843335_-	hypothetical protein	NA	A0A192Y6F5	Salmonella_phage	100.0	4.7e-109
AUM30856.1|1843345_1843603_-	hypothetical protein	NA	A0A192Y5W0	Salmonella_phage	100.0	1.3e-42
AUM30857.1|1843604_1844138_-	hypothetical protein	NA	A0A192Y7N1	Salmonella_phage	100.0	2.5e-101
AUM30858.1|1844208_1844748_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
AUM30859.1|1844884_1845712_-	hypothetical protein	NA	A0A192Y6E5	Salmonella_phage	100.0	2.6e-153
AUM30860.1|1846237_1846423_+	hypothetical protein	NA	NA	NA	NA	NA
AUM30861.1|1846866_1847205_-	hypothetical protein	NA	A0A1C9IHZ4	Salmonella_phage	100.0	7.0e-57
AUM30862.1|1847409_1848105_-	transcriptional regulator	NA	Q8HAA0	Salmonella_phage	100.0	3.2e-128
AUM30863.1|1848078_1848264_+	hypothetical protein	NA	NA	NA	NA	NA
AUM30864.1|1848202_1848427_+	transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
AUM30865.1|1848455_1849010_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
AUM30866.1|1849155_1849332_+	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	78.6	4.2e-21
AUM30867.1|1849350_1849659_-	transcriptional regulator	NA	A0A088CD40	Shigella_phage	93.1	2.5e-45
AUM30868.1|1849648_1849978_-	hypothetical protein	NA	A0A088CBP5	Shigella_phage	90.8	2.6e-40
AUM33717.1|1849894_1850857_+	peptidase	NA	A0A1C9II88	Salmonella_phage	98.6	3.0e-153
AUM30869.1|1850853_1851078_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
AUM30870.1|1851074_1852049_+	hypothetical protein	NA	A0A1C9IHW0	Salmonella_phage	97.8	1.2e-165
AUM30871.1|1852045_1853368_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	53.0	5.7e-118
AUM30872.1|1853360_1855295_+	DNA cytosine methyltransferase	NA	H9C171	Pectobacterium_phage	53.6	1.0e-200
AUM30873.1|1855291_1855681_+	hypothetical protein	NA	A0A192Y8N5	Salmonella_phage	94.6	1.6e-65
AUM30874.1|1855697_1856498_+	DNA-binding protein	NA	A0A0P0ZCS0	Stx2-converting_phage	72.2	1.1e-105
AUM33718.1|1856505_1857495_+	hypothetical protein	NA	A0A1C9IHZ5	Salmonella_phage	98.8	2.6e-192
AUM30875.1|1857508_1858261_+	antitermination protein	NA	Q8SBE4	Shigella_phage	97.2	3.5e-133
AUM30876.1|1858550_1858793_+	hypothetical protein	NA	NA	NA	NA	NA
AUM30877.1|1858924_1859266_+|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	91.0	5.3e-52
AUM30878.1|1859269_1859740_+	lysozyme	NA	S5FV07	Shigella_phage	96.8	8.5e-85
AUM30879.1|1859729_1860122_+	DUF2570 domain-containing protein	NA	U5P0U9	Shigella_phage	84.6	1.3e-51
AUM30880.1|1860652_1860847_+	hypothetical protein	NA	NA	NA	NA	NA
AUM30881.1|1860899_1861250_+	HNH endonuclease	NA	M1FQV2	Enterobacteria_phage	95.7	8.9e-63
AUM30882.1|1861372_1861867_+|terminase	terminase	terminase	Q8HAD7	Salmonella_phage	100.0	4.6e-89
AUM30883.1|1861863_1863597_+|terminase	terminase	terminase	Q8HAD6	Salmonella_phage	99.8	0.0e+00
AUM30884.1|1863608_1863791_+	hypothetical protein	NA	Q8HAD5	Salmonella_phage	100.0	1.0e-25
AUM30885.1|1863790_1865032_+|portal	phage portal protein	portal	Q8HAD4	Salmonella_phage	99.8	2.0e-242
AUM30886.1|1865009_1865660_+	primosome assembly protein PriA	NA	Q8HAD3	Salmonella_phage	100.0	1.5e-119
AUM30887.1|1865674_1866880_+|capsid	capsid protein	capsid	A0A192Y5T6	Salmonella_phage	99.5	3.5e-223
AUM30888.1|1866930_1867131_+	hypothetical protein	NA	Q8HAD1	Salmonella_phage	100.0	1.4e-28
AUM30889.1|1867133_1867457_+	hypothetical protein	NA	A0A192Y8J4	Salmonella_phage	100.0	6.3e-55
AUM30890.1|1867453_1867858_+|tail	phage tail protein	tail	A0A192Y6C2	Salmonella_phage	100.0	3.2e-72
AUM30891.1|1867829_1868342_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	99.4	1.0e-91
AUM30892.1|1868338_1868899_+	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	99.5	3.0e-105
AUM30893.1|1868902_1869067_+	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	100.0	1.0e-24
AUM30894.1|1869056_1870553_+|tail	phage tail protein	tail	A0A192Y7L1	Salmonella_phage	99.8	6.1e-278
AUM30895.1|1870552_1870909_+|tail	phage tail protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
AUM30896.1|1870905_1871232_+|tail	phage tail protein	tail	Q8HAC3	Salmonella_phage	99.1	2.3e-52
AUM30897.1|1871316_1873245_+|tail	phage tail tape measure protein	tail	A0A192Y6D8	Salmonella_phage	98.3	0.0e+00
1871908:1871923	attR	GCATCCGGCGAAATTG	NA	NA	NA	NA
AUM30898.1|1873278_1874619_+	DNA circularization protein	NA	A0A192Y5U9	Salmonella_phage	98.9	5.3e-249
AUM30899.1|1874615_1875674_+|plate	baseplate protein	plate	A0A192Y7L7	Salmonella_phage	99.7	3.0e-202
AUM30900.1|1875673_1876207_+|plate	baseplate assembly protein	plate	Q8HAB9	Salmonella_phage	100.0	1.4e-96
AUM30901.1|1876211_1876625_+	hypothetical protein	NA	A0A192Y6D0	Salmonella_phage	99.3	1.2e-74
AUM30902.1|1876617_1877697_+|plate	phage baseplate protein	plate	A0A192Y6E4	Salmonella_phage	99.2	7.2e-204
AUM30903.1|1877699_1878287_+|tail	phage tail protein	tail	A0A192Y5V3	Salmonella_phage	100.0	2.9e-114
AUM30904.1|1878273_1879836_+|tail	phage tail protein	tail	A0A192Y7M1	Salmonella_phage	98.5	1.7e-283
AUM30905.1|1879835_1880411_+|tail	phage tail protein	tail	A0A192Y8L2	Salmonella_phage	100.0	2.5e-107
AUM30906.1|1880524_1880758_-	hypothetical protein	NA	A0A192Y6D5	Salmonella_phage	100.0	1.2e-36
AUM30907.1|1880993_1881407_-	hypothetical protein	NA	A0A192Y6F0	Salmonella_phage	100.0	2.9e-73
AUM30908.1|1881403_1881616_-	hypothetical protein	NA	A0A192Y5V6	Salmonella_phage	100.0	2.7e-30
AUM30909.1|1883098_1883518_+	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
AUM30910.1|1883520_1884789_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	91.9	2.4e-227
AUM30911.1|1885243_1885456_+	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
AUM33719.1|1885466_1885655_+	cold-shock protein	NA	NA	NA	NA	NA
AUM30912.1|1885915_1887112_-	porin	NA	Q1MVN1	Enterobacteria_phage	56.6	3.3e-109
AUM30913.1|1887761_1888061_+	hypothetical protein	NA	NA	NA	NA	NA
AUM30914.1|1888152_1888848_+	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
AUM30915.1|1888921_1890352_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.5	3.5e-105
>prophage 5
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	1995336	2023685	4805333	tail,integrase,protease,terminase	Enterobacteria_phage(36.36%)	32	1992308:1992321	2014111:2014124
1992308:1992321	attL	TTTCATCCCACAGC	NA	NA	NA	NA
AUM31025.1|1995336_1996416_-|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.9	1.3e-101
AUM31026.1|1996412_1997519_-	exodeoxyribonuclease 8	NA	Q9QF34	Lambdoid_phage	66.7	3.3e-55
AUM31027.1|1997549_1997837_+	lytic enzyme	NA	Q8HA86	Salmonella_phage	95.1	1.9e-39
AUM31028.1|1998622_1998790_-	lytic enzyme	NA	NA	NA	NA	NA
AUM31029.1|1999092_1999584_+	DNA breaking-rejoining protein	NA	Q9EYD0	Enterobacteria_phage	56.2	1.9e-42
AUM31030.1|1999570_1999750_+|tail	phage tail protein	tail	Q9EYD1	Enterobacteria_phage	53.2	2.7e-07
AUM31031.1|1999769_2000144_+|terminase	terminase	terminase	Q8VNN7	Enterobacteria_phage	82.9	1.3e-59
AUM31032.1|2000136_2001465_+	short-chain dehydrogenase	NA	E5G6P0	Salmonella_phage	46.7	1.1e-68
AUM31033.1|2001561_2001762_-	phage virulence factor	NA	NA	NA	NA	NA
AUM31034.1|2001952_2002069_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUM31035.1|2002331_2002457_+	arsenic transporter	NA	NA	NA	NA	NA
AUM31036.1|2002585_2002852_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33722.1|2003086_2003278_+	hypothetical protein	NA	S4TTF2	Salmonella_phage	93.3	1.2e-16
AUM31037.1|2003604_2004219_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AUM31038.1|2004228_2004387_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31039.1|2004519_2005434_-	EamA family transporter	NA	NA	NA	NA	NA
AUM33723.1|2006225_2006810_-	pilus assembly protein	NA	NA	NA	NA	NA
AUM31040.1|2008249_2008450_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31041.1|2008578_2008998_+	N-acetyltransferase	NA	NA	NA	NA	NA
AUM31042.1|2009126_2009603_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31043.1|2009931_2010327_-	cytoplasmic protein	NA	C6ZCX4	Enterobacteria_phage	32.8	7.0e-16
AUM31044.1|2011010_2011733_+	type III secretion protein SopE2	NA	NA	NA	NA	NA
AUM31045.1|2012406_2013057_+	serine/threonine-protein phosphatase	NA	A0A222YWF0	Escherichia_phage	51.4	8.5e-59
AUM31046.1|2013075_2013267_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31047.1|2013377_2013617_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33724.1|2013730_2015170_-	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA	NA
2014111:2014124	attR	TTTCATCCCACAGC	NA	NA	NA	NA
AUM31048.1|2015247_2017881_-	MCE family protein	NA	NA	NA	NA	NA
AUM31049.1|2017849_2019133_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AUM31050.1|2019261_2019759_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA	NA
AUM31051.1|2019856_2020543_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
AUM31052.1|2020562_2022611_+|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	33.5	1.0e-86
AUM31053.1|2022803_2023685_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 6
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	2216708	2225448	4805333	integrase,tRNA	Escherichia_phage(33.33%)	10	2210961:2210974	2233644:2233657
2210961:2210974	attL	AAAGGCGGCAGCGC	NA	NA	NA	NA
AUM31243.1|2216708_2217863_+	chemoreceptor protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.8	2.0e-10
AUM31244.1|2218008_2218992_+	zinc transporter ZntB	NA	NA	NA	NA	NA
AUM31245.1|2219267_2219450_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31246.1|2219478_2220852_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.0	2.1e-51
AUM31247.1|2220895_2221831_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	9.4e-144
AUM31248.1|2221882_2222074_-|integrase	integrase	integrase	A0A0U2JGI6	Escherichia_phage	95.2	7.8e-29
AUM31249.1|2222518_2224351_+	DUF4765 domain-containing protein	NA	A0A0N7KZG3	Stx2-converting_phage	34.7	2.5e-47
AUM31250.1|2224522_2224633_+	multidrug transporter	NA	NA	NA	NA	NA
AUM31251.1|2224625_2224964_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AUM31252.1|2225013_2225448_-	universal stress protein F	NA	A0A1W6JNV4	Morganella_phage	52.1	9.4e-30
2233644:2233657	attR	AAAGGCGGCAGCGC	NA	NA	NA	NA
>prophage 7
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	2591482	2648087	4805333	integrase,tail,lysis,head,terminase,tRNA	Salmonella_phage(52.05%)	81	2598514:2598543	2648397:2648426
AUM31607.1|2591482_2593870_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AUM31608.1|2593885_2594869_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	1.1e-33
AUM33746.1|2594947_2595043_-|tRNA	phenylalanyl-tRNA synthetase (pheST) operon leader peptide	tRNA	NA	NA	NA	NA
AUM31609.1|2595170_2595527_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AUM31610.1|2595577_2595775_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AUM31611.1|2595870_2596413_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.7	4.8e-15
AUM31612.1|2596416_2598345_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.6	1.6e-129
2598514:2598543	attL	GATGGTAACACTAAAAAAAGGGAGATTGCA	NA	NA	NA	NA
AUM31613.1|2598677_2599946_-	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	94.1	2.7e-234
AUM31614.1|2599948_2600368_-	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	59.8	3.8e-36
AUM33747.1|2600607_2600850_+	DNA-damage-inducible protein I	NA	S4TND2	Salmonella_phage	98.5	5.2e-30
AUM31615.1|2600918_2602049_-	hypothetical protein	NA	S4TSP4	Salmonella_phage	100.0	4.4e-204
AUM31616.1|2602059_2603019_-	hypothetical protein	NA	H6WRW5	Salmonella_phage	100.0	9.6e-184
AUM31617.1|2603027_2606210_-	hypothetical protein	NA	H6WRW4	Salmonella_phage	93.5	0.0e+00
AUM31618.1|2606219_2606747_-|tail	phage tail protein	tail	H6WRW3	Salmonella_phage	86.8	1.1e-67
AUM31619.1|2606689_2607409_-|tail	phage tail protein	tail	H6WRW2	Salmonella_phage	99.5	9.8e-133
AUM31620.1|2607408_2608113_-|tail	phage minor tail protein L	tail	A0A1V0E5N2	Salmonella_phage	96.2	1.9e-133
AUM31621.1|2608148_2608496_-|tail	phage tail protein	tail	H6WRV8	Salmonella_phage	96.5	2.2e-61
AUM31622.1|2608843_2611225_-|tail	phage tail protein	tail	F1C5E9	Cronobacter_phage	51.5	8.3e-152
AUM31623.1|2611284_2611752_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31624.1|2611748_2612078_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31625.1|2612386_2613241_+	phage antirepressor Ant	NA	I6R977	Salmonella_phage	54.8	2.1e-81
AUM31626.1|2613350_2613623_-	hypothetical protein	NA	H6WRV0	Salmonella_phage	98.9	2.2e-45
AUM31627.1|2613622_2614411_-	phage antirepressor Ant	NA	H6WRU9	Salmonella_phage	100.0	5.2e-127
AUM31628.1|2614475_2615345_-	hypothetical protein	NA	B6SD57	Bacteriophage	52.5	7.9e-68
AUM31629.1|2615331_2615499_-	Arc family DNA binding domain-containing protein	NA	G9L6D7	Escherichia_phage	72.7	2.3e-16
AUM31630.1|2615624_2616056_+	Rha family transcriptional regulator	NA	G9L6D6	Escherichia_phage	57.5	2.5e-27
AUM31631.1|2616100_2616829_-	DNA-binding protein	NA	H6WRU3	Salmonella_phage	100.0	3.1e-142
AUM31632.1|2617050_2617704_-	hypothetical protein	NA	H6WRU2	Salmonella_phage	99.5	1.3e-120
AUM31633.1|2617748_2618486_-	hypothetical protein	NA	Q5G8X3	Enterobacteria_phage	98.8	2.7e-130
AUM31634.1|2618501_2618888_-	hypothetical protein	NA	Q5G8X4	Enterobacteria_phage	98.4	2.9e-67
AUM31635.1|2618884_2619280_-	hypothetical protein	NA	Q5G8X5	Enterobacteria_phage	100.0	7.2e-69
AUM31636.1|2619287_2619650_-	hypothetical protein	NA	Q5G8X6	Enterobacteria_phage	98.3	1.0e-66
AUM31637.1|2619642_2619822_-	hypothetical protein	NA	Q5G8X7	Enterobacteria_phage	98.3	2.5e-29
AUM31638.1|2619821_2620223_-	hypothetical protein	NA	Q5G8X8	Enterobacteria_phage	100.0	1.4e-72
AUM31639.1|2620274_2620463_-	glycoprotein	NA	Q5G8X9	Enterobacteria_phage	100.0	2.9e-28
AUM31640.1|2620472_2621549_-	hypothetical protein	NA	Q5G8Y0	Enterobacteria_phage	100.0	1.4e-207
AUM31641.1|2621566_2622013_-	hypothetical protein	NA	H6WRT3	Salmonella_phage	100.0	3.1e-76
AUM31642.1|2622025_2623288_-	hypothetical protein	NA	H6WRT2	Salmonella_phage	99.8	8.0e-239
AUM31643.1|2623303_2624263_-|head	phage head morphogenesis protein	head	H6WRT1	Salmonella_phage	99.1	8.7e-177
AUM31644.1|2624216_2625569_-	DUF1073 domain-containing protein	NA	H6WRT0	Salmonella_phage	99.3	5.7e-259
AUM31645.1|2625701_2627021_-|terminase	terminase	terminase	H6WRS9	Salmonella_phage	98.9	5.1e-260
AUM31646.1|2627004_2627436_-|terminase	terminase small subunit	terminase	Q5G8Y8	Enterobacteria_phage	100.0	5.8e-72
AUM31647.1|2627791_2628322_-	hypothetical protein	NA	B8K1H1	Salmonella_phage	96.6	5.3e-91
AUM33748.1|2628275_2628500_-	hypothetical protein	NA	A0A1V0E5I0	Salmonella_phage	90.3	1.2e-25
AUM31648.1|2628534_2629002_-|lysis	lysis protein	lysis	Q76H63	Enterobacteria_phage	89.7	1.7e-69
AUM33749.1|2629090_2629588_-	lysozyme	NA	I6R0P2	Salmonella_phage	98.8	2.4e-90
AUM31649.1|2629565_2629769_-	hypothetical protein	NA	I6R0S9	Salmonella_phage	97.0	1.9e-33
AUM31650.1|2630244_2630751_-	antiterminator	NA	A0A1R3Y5U9	Salmonella_virus	95.8	6.1e-89
AUM31651.1|2630747_2630927_-	hypothetical protein	NA	A0A1V0E5I7	Salmonella_phage	96.6	3.5e-23
AUM31652.1|2630907_2631111_-	protein ninH	NA	A0A1R3Y5V4	Salmonella_virus	98.5	2.7e-32
AUM31653.1|2631107_2631710_-	protein NinG	NA	A0A1U9AJF8	Stx1_converting_phage	94.6	2.1e-91
AUM31654.1|2631684_2632251_-	endonuclease	NA	A0A1U9AJK5	Stx1_converting_phage	99.5	6.6e-108
AUM31655.1|2632243_2632414_-	protein ninF	NA	K7PM86	Enterobacteria_phage	100.0	1.2e-25
AUM31656.1|2632410_2632593_-	protein ninE	NA	Q716C5	Shigella_phage	100.0	1.3e-28
AUM31657.1|2632589_2633117_-	phage N-6-adenine-methyltransferase	NA	K7PJZ4	Enterobacterial_phage	98.3	1.0e-99
AUM31658.1|2633113_2633560_-	protein ninB	NA	Q8VNP6	Enterobacteria_phage	81.1	1.3e-66
AUM33750.1|2633699_2633963_-	hypothetical protein	NA	A0A192Y6R5	Salmonella_phage	97.7	2.6e-43
AUM33751.1|2633974_2634169_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31659.1|2634183_2634390_-	hypothetical protein	NA	A0A192Y802	Salmonella_phage	97.1	1.2e-30
AUM31660.1|2634462_2634741_-	hypothetical protein	NA	Q5G8S7	Enterobacteria_phage	95.7	7.1e-47
AUM31661.1|2634741_2636622_-	bifunctional DNA primase/helicase	NA	Q5G8S8	Enterobacteria_phage	98.2	0.0e+00
AUM31662.1|2636729_2637578_-	replication protein	NA	C6ZR51	Salmonella_phage	94.7	8.0e-150
AUM31663.1|2637760_2638039_-	hypothetical protein	NA	Q5G8T2	Enterobacteria_phage	100.0	2.5e-44
AUM31664.1|2638145_2638331_-	hypothetical protein	NA	Q5G8T3	Enterobacteria_phage	100.0	5.4e-27
AUM31665.1|2638411_2639062_+	LexA family transcriptional repressor	NA	B1B6L9	Salmonella_phage	100.0	5.4e-122
AUM31666.1|2639183_2639381_-	hypothetical protein	NA	A0A075B8J1	Enterobacteria_phage	97.1	1.5e-11
AUM31667.1|2639400_2639703_+	regulator	NA	I6S5Z3	Salmonella_phage	94.0	4.5e-47
AUM31668.1|2639781_2640900_+	hypothetical protein	NA	Q5G8T6	Enterobacteria_phage	72.3	1.2e-68
AUM31669.1|2641109_2641268_+	hypothetical protein	NA	I6R987	Salmonella_phage	100.0	8.1e-24
AUM31670.1|2641248_2641437_+	protein kil	NA	I6S647	Salmonella_phage	100.0	3.7e-31
AUM31671.1|2641566_2642274_+	recombinase	NA	I6R0N0	Salmonella_phage	98.3	1.9e-136
AUM31672.1|2642274_2642781_+	single-stranded DNA-binding protein	NA	C6ZR36	Salmonella_phage	99.4	2.3e-91
AUM31673.1|2642789_2643338_+	ATPase	NA	C6ZR35	Salmonella_phage	98.9	6.6e-105
AUM31674.1|2643353_2643647_+	RecBCD nuclease inhibitor	NA	I6R984	Salmonella_phage	96.9	2.7e-49
AUM31675.1|2643657_2643828_+	hypothetical protein	NA	I6S642	Salmonella_phage	100.0	6.1e-25
AUM31676.1|2643824_2644415_+	Eae-like protein	NA	Q5G8U6	Enterobacteria_phage	68.2	5.5e-65
AUM31677.1|2644411_2644645_+	hypothetical protein	NA	S4TVX5	Salmonella_phage	46.2	1.6e-12
AUM31678.1|2644641_2645367_+	hypothetical protein	NA	A0A125RPT9	Escherichia_phage	58.8	2.0e-24
AUM31679.1|2645363_2645552_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31680.1|2646684_2646930_+	hypothetical protein	NA	A0A1P8DTG1	Proteus_phage	56.7	9.1e-14
AUM31681.1|2646875_2648087_-|integrase	integrase	integrase	I6R9B6	Salmonella_phage	99.0	3.6e-236
2648397:2648426	attR	GATGGTAACACTAAAAAAAGGGAGATTGCA	NA	NA	NA	NA
>prophage 8
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	2728040	2736320	4805333	tail,transposase	Escherichia_phage(42.86%)	9	NA	NA
AUM31769.1|2728040_2728280_+	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AUM31770.1|2728490_2728655_-|transposase	transposase	transposase	NA	NA	NA	NA
AUM33755.1|2729152_2729962_+	cytolethal distending toxin subunit B-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AUM31771.1|2730034_2730412_+|tail	phage tail protein	tail	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AUM31772.1|2730559_2731102_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AUM31773.1|2731294_2732023_-	pertussis toxin-like subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	52.5	1.6e-61
AUM31774.1|2732039_2732453_-	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	38.6	4.2e-19
AUM31775.1|2733499_2734624_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31776.1|2735069_2736320_-	isocitrate dehydrogenase (NADP(+))	NA	Q77Z09	Phage_21	90.7	2.0e-19
>prophage 9
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	2890747	2935011	4805333	integrase,tail,lysis,head,terminase	Salmonella_phage(45.28%)	67	2891388:2891447	2933854:2933931
AUM31934.1|2890747_2891269_+	virulence protein	NA	Q9MBM0	Phage_Gifsy-2	73.3	7.8e-63
2891388:2891447	attL	TAACCCCTTGTTTAATCTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTC	NA	NA	NA	NA
AUM31935.1|2891656_2891923_+	hypothetical protein	NA	A0A0M3ULK3	Salmonella_phage	78.4	7.3e-33
AUM31936.1|2891979_2892627_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31937.1|2892669_2892873_-	hypothetical protein	NA	S4TTF2	Salmonella_phage	97.0	1.5e-09
AUM31938.1|2893398_2893509_-|tail	phage tail protein	tail	A0A0M4RTP2	Salmonella_phage	87.5	7.9e-10
AUM31939.1|2893492_2893885_-|tail	phage tail protein	tail	I1TQ41	Pseudomonas_phage	37.4	8.5e-14
AUM31940.1|2893994_2894603_-|tail	phage tail protein	tail	S5MBX6	Escherichia_phage	44.7	1.1e-31
AUM31941.1|2894665_2894863_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31942.1|2895099_2895618_-|tail	phage tail protein	tail	A0A0U2QV64	Escherichia_phage	53.8	2.0e-47
AUM31943.1|2895632_2897165_-|tail	phage tail protein	tail	S4TP62	Salmonella_phage	66.2	1.4e-128
AUM31944.1|2897164_2897845_-	hypothetical protein	NA	A0A0M5M1K4	Salmonella_phage	96.0	5.5e-125
AUM31945.1|2897841_2899041_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	96.7	5.5e-213
AUM31946.1|2899041_2899395_-	hypothetical protein	NA	A0A0M4R339	Salmonella_phage	95.7	3.0e-58
AUM31947.1|2899394_2900147_-	translation initiation factor IF-2	NA	A0A0M5M1K7	Salmonella_phage	69.8	9.7e-91
AUM31948.1|2900265_2900721_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31949.1|2900804_2901137_-	hypothetical protein	NA	A0A0M4RTY3	Salmonella_phage	69.1	1.7e-23
AUM31950.1|2901133_2902201_-	hypothetical protein	NA	A0A0M4QX01	Salmonella_phage	91.5	2.0e-174
AUM31951.1|2902203_2902506_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	100.0	4.2e-53
AUM31952.1|2902505_2903081_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	99.5	9.1e-97
AUM31953.1|2903080_2905090_-	lytic transglycosylase	NA	A0A0M4REK7	Salmonella_phage	95.2	0.0e+00
AUM33761.1|2905079_2905256_-	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	72.9	4.7e-12
AUM31954.1|2905267_2905720_-	hypothetical protein	NA	A0A0M4S6U8	Salmonella_phage	78.7	1.3e-61
AUM31955.1|2905723_2906164_-	hypothetical protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	73.3	2.5e-54
AUM31956.1|2906175_2907321_-	hypothetical protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.8	5.9e-164
AUM31957.1|2907324_2907870_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	50.8	7.4e-48
AUM31958.1|2907862_2908267_-|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	69.2	4.1e-43
AUM31959.1|2908266_2908776_-	hypothetical protein	NA	A0A2H4J488	uncultured_Caudovirales_phage	40.7	8.5e-22
AUM31960.1|2908772_2909183_-	hypothetical protein	NA	A0A0M5M3S2	Salmonella_phage	57.4	2.5e-32
AUM31961.1|2909151_2909520_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31962.1|2909569_2910517_-	hypothetical protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	55.9	1.2e-98
AUM31963.1|2910528_2911032_-	hypothetical protein	NA	A0A0M4QWZ6	Salmonella_phage	46.4	3.4e-31
AUM31964.1|2911043_2912321_-	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	42.8	1.6e-77
AUM31965.1|2912372_2912906_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.9	5.5e-48
AUM31966.1|2912976_2914446_-	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	55.7	1.1e-157
AUM31967.1|2914485_2915904_-|terminase	terminase	terminase	A0A077KAW0	Edwardsiella_phage	70.0	6.8e-186
AUM31968.1|2915869_2916622_-	hypothetical protein	NA	A0A0M3ULJ9	Salmonella_phage	55.2	2.6e-11
AUM33762.1|2916685_2916874_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31969.1|2917186_2917654_-|lysis	lysis protein	lysis	S4TNN7	Salmonella_phage	80.6	2.5e-60
AUM31970.1|2917650_2918562_-	site-specific DNA-methyltransferase	NA	A0A088FRS2	Escherichia_phage	53.0	3.2e-88
AUM31971.1|2918558_2919047_-	lysozyme	NA	M9P0E5	Enterobacteria_phage	68.1	4.6e-57
AUM33763.1|2919024_2919327_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUM31972.1|2919529_2919718_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31973.1|2920110_2920689_-	hypothetical protein	NA	A0A0U2S606	Escherichia_phage	52.0	2.4e-44
AUM31974.1|2920685_2920979_-	hypothetical protein	NA	A0A0U2KD41	Escherichia_phage	65.3	2.1e-33
AUM31975.1|2920975_2921572_-	hypothetical protein	NA	H9C173	Pectobacterium_phage	73.7	1.5e-81
AUM31976.1|2921640_2921832_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31977.1|2922015_2922354_-	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	86.6	3.7e-50
AUM31978.1|2922353_2922524_-	methyltransferase	NA	I6S1S6	Salmonella_phage	87.5	6.3e-06
AUM31979.1|2922520_2923123_-	adenine methylase	NA	G9L699	Escherichia_phage	87.3	1.7e-98
AUM31980.1|2923115_2923364_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31981.1|2923367_2924048_-	hypothetical protein	NA	NA	NA	NA	NA
AUM31982.1|2924085_2925474_-	replicative DNA helicase	NA	Q76H51	Enterobacteria_phage	47.1	1.2e-105
AUM31983.1|2925470_2926451_-	helix-turn-helix domain-containing protein	NA	H9C164	Pectobacterium_phage	80.6	2.3e-44
AUM31984.1|2926453_2926678_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	44.7	1.0e-08
AUM31985.1|2926700_2927147_-	hypothetical protein	NA	H9C162	Pectobacterium_phage	50.4	5.5e-25
AUM33764.1|2927081_2927297_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31986.1|2927211_2927445_-	transcriptional regulator	NA	A0A0U2S629	Escherichia_phage	48.6	6.2e-12
AUM33765.1|2927552_2928008_+	transcriptional regulator	NA	A0A0U2QW76	Escherichia_phage	51.7	4.6e-35
AUM31987.1|2928692_2929016_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31988.1|2929023_2929269_+	hypothetical protein	NA	A0A1B1W282	Salmonella_phage	53.8	3.5e-13
AUM31989.1|2929298_2931572_+	hypothetical protein	NA	H9C157	Pectobacterium_phage	35.0	9.4e-105
AUM31990.1|2931568_2932123_+	hypothetical protein	NA	H9C156	Pectobacterium_phage	59.3	1.3e-47
AUM31991.1|2932125_2932308_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31992.1|2932357_2932555_+	hypothetical protein	NA	H9C154	Pectobacterium_phage	58.5	8.3e-10
AUM31993.1|2932520_2932745_+	hypothetical protein	NA	NA	NA	NA	NA
AUM31994.1|2932745_2933765_+|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	53.5	1.2e-91
AUM31995.1|2934351_2935011_+	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
2933854:2933931	attR	TAACCCCTTGTTTAATCTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGG	NA	NA	NA	NA
>prophage 10
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	3365442	3415198	4805333	tail,integrase,head,terminase	Salmonella_phage(54.93%)	78	3368310:3368354	3415214:3415258
AUM32364.1|3365442_3366768_-	oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.5	1.0e-103
AUM32365.1|3366983_3367838_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUM32366.1|3367888_3367990_-	cation transporter	NA	NA	NA	NA	NA
3368310:3368354	attL	TGGCGCGCCCTGCAGGATTCGAACCTGCGACCCACGGCTTAGAAG	NA	NA	NA	NA
AUM32367.1|3368769_3369015_+	DNA-damage-inducible protein I	NA	S4TND2	Salmonella_phage	98.5	5.3e-30
AUM32368.1|3369083_3370214_-	hypothetical protein	NA	S4TSP4	Salmonella_phage	97.9	8.6e-200
AUM32369.1|3370333_3370576_+	cor protein	NA	Q5G8V7	Enterobacteria_phage	100.0	1.6e-39
AUM32370.1|3370757_3371411_-	hypothetical protein	NA	Q5G8V8	Enterobacteria_phage	100.0	8.7e-120
AUM32371.1|3371410_3371722_-	hypothetical protein	NA	Q5G8V9	Enterobacteria_phage	99.0	4.3e-53
AUM32372.1|3371721_3374877_-	hypothetical protein	NA	Q5G8W0	Enterobacteria_phage	98.3	0.0e+00
AUM32373.1|3374886_3375414_-|tail	phage tail protein	tail	I6RSM0	Salmonella_phage	93.2	2.4e-64
AUM32374.1|3375356_3376076_-|tail	phage tail protein	tail	A0A1V0E5M9	Salmonella_phage	89.1	4.4e-133
AUM32375.1|3376075_3376780_-|tail	phage minor tail protein L	tail	A0A1V0E5N2	Salmonella_phage	99.6	1.9e-136
AUM32376.1|3376944_3377232_+	hypothetical protein	NA	A0A1V0E5N9	Salmonella_phage	97.9	8.1e-46
AUM32377.1|3377236_3377497_-	hypothetical protein	NA	A0A1V0E5N5	Salmonella_phage	100.0	7.3e-38
AUM32378.1|3377531_3377879_-|tail	phage tail protein	tail	A0A1V0E5N3	Salmonella_phage	97.4	2.2e-61
AUM32379.1|3377881_3380122_-	tape measure domain-containing protein	NA	I6S1R4	Salmonella_phage	98.4	5.7e-304
AUM32380.1|3380161_3380548_-	hypothetical protein	NA	I6R0Q4	Salmonella_phage	100.0	5.4e-69
AUM32381.1|3380659_3381397_-	transcriptional regulator	NA	H6WRU9	Salmonella_phage	40.6	1.0e-12
AUM33783.1|3381480_3382185_-	hypothetical protein	NA	H6WRU8	Salmonella_phage	47.9	1.3e-52
AUM32382.1|3382442_3383306_+	hypothetical protein	NA	NA	NA	NA	NA
AUM32383.1|3383346_3383568_-	hypothetical protein	NA	K7PJU3	Enterobacteria_phage	78.8	9.3e-26
AUM32384.1|3383636_3383951_-	hypothetical protein	NA	NA	NA	NA	NA
AUM32385.1|3383982_3384636_-	hypothetical protein	NA	I6R0Q2	Salmonella_phage	97.7	2.8e-118
AUM32386.1|3384681_3385419_-	hypothetical protein	NA	Q5G8X3	Enterobacteria_phage	98.8	2.7e-130
AUM32387.1|3385434_3385821_-	hypothetical protein	NA	Q5G8X4	Enterobacteria_phage	98.4	2.9e-67
AUM32388.1|3385817_3386213_-	hypothetical protein	NA	Q5G8X5	Enterobacteria_phage	100.0	7.2e-69
AUM32389.1|3386220_3386583_-	hypothetical protein	NA	Q5G8X6	Enterobacteria_phage	98.3	1.0e-66
AUM32390.1|3386575_3386755_-	hypothetical protein	NA	Q5G8X7	Enterobacteria_phage	98.3	2.5e-29
AUM32391.1|3386754_3387156_-	hypothetical protein	NA	Q5G8X8	Enterobacteria_phage	100.0	1.4e-72
AUM32392.1|3387207_3387396_-	glycoprotein	NA	Q5G8X9	Enterobacteria_phage	100.0	2.9e-28
AUM32393.1|3387405_3388482_-	hypothetical protein	NA	Q5G8Y0	Enterobacteria_phage	100.0	1.4e-207
AUM32394.1|3388499_3388946_-	hypothetical protein	NA	H6WRT3	Salmonella_phage	100.0	3.1e-76
AUM32395.1|3388958_3390221_-	hypothetical protein	NA	H6WRT2	Salmonella_phage	99.8	8.0e-239
AUM32396.1|3390236_3391196_-|head	phage head morphogenesis protein	head	H6WRT1	Salmonella_phage	99.1	8.7e-177
AUM32397.1|3391149_3392502_-	DUF1073 domain-containing protein	NA	H6WRT0	Salmonella_phage	99.3	5.7e-259
AUM32398.1|3392634_3393954_-|terminase	terminase	terminase	H6WRS9	Salmonella_phage	98.9	5.1e-260
AUM32399.1|3393937_3394369_-|terminase	terminase small subunit	terminase	Q5G8Y8	Enterobacteria_phage	100.0	5.8e-72
AUM32400.1|3394724_3395255_-	hypothetical protein	NA	B8K1H1	Salmonella_phage	96.6	5.3e-91
AUM32401.1|3395208_3395472_-	hypothetical protein	NA	A0A1V0E5I0	Salmonella_phage	84.2	8.2e-21
AUM32402.1|3395641_3395929_-	hypothetical protein	NA	NA	NA	NA	NA
AUM32403.1|3395925_3396156_-	hypothetical protein	NA	M4Q0Z5	Dunaliella_viridis_virus	40.6	9.8e-10
AUM32404.1|3396152_3396620_-	lysozyme	NA	H9C148	Vibrio_phage	44.4	6.2e-27
AUM33784.1|3396594_3396822_-	hypothetical protein	NA	NA	NA	NA	NA
AUM32405.1|3397211_3397700_-	antiterminator	NA	I6S672	Salmonella_phage	86.4	8.9e-77
AUM32406.1|3397696_3397876_-	hypothetical protein	NA	A0A1V0E5I7	Salmonella_phage	96.6	3.5e-23
AUM32407.1|3397856_3398060_-	protein ninH	NA	A0A1R3Y5V4	Salmonella_virus	98.5	2.7e-32
AUM32408.1|3398056_3398659_-	protein NinG	NA	A0A1U9AJF8	Stx1_converting_phage	94.6	2.1e-91
AUM32409.1|3398633_3399200_-	endonuclease	NA	A0A1U9AJK5	Stx1_converting_phage	99.5	6.6e-108
AUM32410.1|3399192_3399363_-	protein ninF	NA	K7PM86	Enterobacteria_phage	100.0	1.2e-25
AUM32411.1|3399359_3399542_-	protein ninE	NA	Q716C5	Shigella_phage	100.0	1.3e-28
AUM32412.1|3399538_3400066_-	phage N-6-adenine-methyltransferase	NA	K7PJZ4	Enterobacterial_phage	98.3	1.0e-99
AUM32413.1|3400062_3400509_-	protein ninB	NA	Q8VNP6	Enterobacteria_phage	81.1	1.3e-66
AUM33785.1|3400648_3400912_-	hypothetical protein	NA	A0A192Y6R5	Salmonella_phage	97.7	2.6e-43
AUM33786.1|3400923_3401118_-	hypothetical protein	NA	NA	NA	NA	NA
AUM32414.1|3401132_3401339_-	hypothetical protein	NA	A0A192Y802	Salmonella_phage	97.1	1.2e-30
AUM32415.1|3401411_3401690_-	hypothetical protein	NA	Q5G8S7	Enterobacteria_phage	95.7	7.1e-47
AUM32416.1|3401690_3403571_-	bifunctional DNA primase/helicase	NA	Q5G8S8	Enterobacteria_phage	98.2	0.0e+00
AUM32417.1|3403678_3404527_-	replication protein	NA	C6ZR51	Salmonella_phage	94.7	8.0e-150
AUM32418.1|3404709_3404991_-	hypothetical protein	NA	Q76H54	Enterobacteria_phage	98.9	1.6e-43
AUM32419.1|3405101_3405317_-	transcriptional regulator	NA	A0A0M4RTV8	Salmonella_phage	100.0	4.1e-34
AUM33787.1|3405435_3406098_+	LexA family transcriptional repressor	NA	Q37946	Enterobacteria_phage	99.5	8.2e-126
AUM32420.1|3406235_3406433_-	hypothetical protein	NA	A0A075B8J1	Enterobacteria_phage	94.3	3.7e-10
AUM32421.1|3406452_3406755_+	regulator	NA	I6S5Z3	Salmonella_phage	94.0	4.5e-47
AUM32422.1|3406833_3407952_+	hypothetical protein	NA	Q5G8T6	Enterobacteria_phage	72.3	1.2e-68
AUM32423.1|3408161_3408320_+	hypothetical protein	NA	I6R987	Salmonella_phage	100.0	8.1e-24
AUM32424.1|3408300_3408489_+	protein kil	NA	I6S647	Salmonella_phage	100.0	3.7e-31
AUM32425.1|3408618_3409326_+	recombinase	NA	I6R0N0	Salmonella_phage	98.3	1.9e-136
AUM32426.1|3409326_3409833_+	single-stranded DNA-binding protein	NA	C6ZR36	Salmonella_phage	99.4	2.3e-91
AUM32427.1|3409841_3410390_+	ATPase	NA	C6ZR35	Salmonella_phage	98.9	6.6e-105
AUM32428.1|3410405_3410699_+	RecBCD nuclease inhibitor	NA	I6R984	Salmonella_phage	96.9	2.7e-49
AUM32429.1|3410709_3410877_+	hypothetical protein	NA	A0A1V0E5L8	Salmonella_phage	96.4	5.0e-24
AUM32430.1|3410873_3411128_+	hypothetical protein	NA	A0A1V0E5L1	Salmonella_phage	94.0	3.2e-38
AUM32431.1|3411114_3411642_+	hypothetical protein	NA	K7P6J7	Enterobacteria_phage	67.2	2.4e-75
AUM32432.1|3411643_3412159_+	hypothetical protein	NA	A0A0P0ZBM8	Stx2-converting_phage	100.0	2.4e-101
AUM32433.1|3412155_3413010_+	hypothetical protein	NA	A0A192Y7X3	Salmonella_phage	48.5	2.0e-47
AUM32434.1|3413009_3413195_+	hypothetical protein	NA	A0A1V0E5M0	Salmonella_phage	93.4	9.2e-27
AUM32435.1|3413325_3413592_+	hypothetical protein	NA	A0A1V0E5L9	Salmonella_phage	96.6	2.4e-44
AUM32436.1|3414034_3415198_+|integrase	integrase	integrase	B9UDL9	Salmonella_phage	97.9	3.0e-224
3415214:3415258	attR	TGGCGCGCCCTGCAGGATTCGAACCTGCGACCCACGGCTTAGAAG	NA	NA	NA	NA
>prophage 11
CP019174	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 chromosome, complete genome	4805333	4551257	4612584	4805333	integrase,capsid,tail,holin,head,portal,terminase,tRNA	Cronobacter_phage(54.84%)	71	4550549:4550593	4580919:4580963
4550549:4550593	attL	GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTG	NA	NA	NA	NA
AUM33423.1|4551257_4552982_-	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	62.6	7.3e-174
AUM33424.1|4552989_4553532_-	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	56.0	7.1e-43
AUM33425.1|4553503_4554226_-	hypothetical protein	NA	F1BUK1	Cronobacter_phage	40.3	1.5e-40
AUM33829.1|4554215_4554635_-|tail	phage tail protein	tail	S4TUB9	Salmonella_phage	94.1	6.4e-68
AUM33426.1|4554782_4557017_-|tail	phage tail protein	tail	A0A192Y7M1	Salmonella_phage	73.7	1.7e-170
AUM33427.1|4557028_4557622_-	hypothetical protein	NA	F1BUK5	Cronobacter_phage	64.3	4.7e-72
AUM33428.1|4557614_4558799_-	hypothetical protein	NA	F1BUK6	Cronobacter_phage	69.0	5.7e-154
AUM33429.1|4558791_4559127_-	hypothetical protein	NA	F1BUK8	Cronobacter_phage	59.6	5.6e-30
AUM33430.1|4559123_4561238_-|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	41.7	2.6e-141
AUM33431.1|4561427_4561697_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33432.1|4561693_4561918_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33433.1|4561799_4562183_-	hypothetical protein	NA	A0A2I6PD12	Escherichia_phage	39.5	8.4e-06
AUM33434.1|4562182_4562521_-	hypothetical protein	NA	F1BUL3	Cronobacter_phage	85.1	2.3e-44
AUM33435.1|4562507_4562819_-|holin	holin	holin	NA	NA	NA	NA
AUM33436.1|4562823_4563279_-|tail	phage tail protein	tail	A5X9I1	Aeromonas_virus	52.3	1.5e-38
AUM33437.1|4563282_4564425_-|tail	phage tail protein	tail	F1BUL5	Cronobacter_phage	61.6	1.1e-130
AUM33830.1|4564427_4565084_-	hypothetical protein	NA	F1BUL6	Cronobacter_phage	58.9	8.6e-67
AUM33438.1|4565119_4565596_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUM33439.1|4565592_4566066_-|head	head completion protein	head	F1BUL8	Cronobacter_phage	55.1	5.4e-31
AUM33440.1|4566168_4566870_-|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	56.7	1.3e-68
AUM33441.1|4566872_4567895_-|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	55.1	7.3e-97
AUM33442.1|4567923_4568985_-|capsid	capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	44.3	2.9e-32
AUM33443.1|4569162_4570974_+	hypothetical protein	NA	F1BUM5	Cronobacter_phage	54.5	2.5e-185
AUM33444.1|4570970_4572032_+|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	60.5	4.0e-122
AUM33445.1|4572028_4572355_+	transcriptional regulator	NA	F1BUM8	Cronobacter_phage	54.8	7.3e-27
AUM33831.1|4572397_4572727_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33446.1|4572984_4573389_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33447.1|4573646_4576262_-	replication protein	NA	A0A1S6L028	Salmonella_phage	37.8	1.4e-128
AUM33448.1|4576276_4577281_-	adenine methylase	NA	A0A0M4QWR0	Salmonella_phage	65.9	8.3e-130
AUM33449.1|4577351_4577741_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33450.1|4577756_4577978_-	hypothetical protein	NA	A0A0M4S6M9	Salmonella_phage	50.0	2.2e-11
AUM33451.1|4578115_4578391_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33452.1|4578365_4578986_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33453.1|4578986_4579259_-	hypothetical protein	NA	Q1JS20	Enterobacteria_phage	85.6	1.3e-40
AUM33454.1|4579454_4579748_+	transcriptional regulator	NA	Q1JS37	Enterobacteria_phage	75.3	1.1e-34
AUM33455.1|4579817_4580798_+|integrase	integrase	integrase	Q7Y4C5	Escherichia_virus	85.0	1.2e-160
AUM33456.1|4580987_4581488_-	stress adaptor protein CpxP	NA	NA	NA	NA	NA
4580919:4580963	attR	GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTG	NA	NA	NA	NA
AUM33457.1|4581638_4582337_+	DNA-binding response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
AUM33458.1|4582333_4583707_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	25.6	7.2e-15
AUM33459.1|4583757_4584153_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33460.1|4584164_4584854_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AUM33461.1|4584923_4585544_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	58.4	7.1e-63
AUM33462.1|4585872_4586856_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33463.1|4586874_4587390_+	TRAP transporter small permease protein	NA	NA	NA	NA	NA
AUM33464.1|4587382_4588690_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33465.1|4588847_4589531_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33466.1|4590149_4591184_+	rhamnose/proton symporter RhaT	NA	NA	NA	NA	NA
AUM33467.1|4591180_4592029_-	HTH-type transcriptional activator RhaR	NA	NA	NA	NA	NA
AUM33468.1|4592181_4593018_-	transcriptional activator RhaS	NA	NA	NA	NA	NA
AUM33469.1|4593305_4594775_+	rhamnulokinase	NA	NA	NA	NA	NA
AUM33470.1|4594771_4596031_+	L-rhamnose isomerase	NA	NA	NA	NA	NA
AUM33471.1|4596173_4597001_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA	NA
AUM33472.1|4597127_4598276_+	lactaldehyde reductase	NA	NA	NA	NA	NA
AUM33473.1|4598272_4598587_+	L-rhamnose mutarotase	NA	NA	NA	NA	NA
AUM33832.1|4598675_4599242_-	transcriptional regulator	NA	NA	NA	NA	NA
AUM33474.1|4599324_4599984_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUM33475.1|4599983_4600307_+	branched-chain amino acid transport	NA	NA	NA	NA	NA
AUM33476.1|4600662_4601763_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33477.1|4601955_4602792_-	sulfurtransferase FdhD	NA	NA	NA	NA	NA
AUM33478.1|4602986_4603574_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUM33479.1|4603622_4606037_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA	NA
AUM33480.1|4606049_4606952_+	formate dehydrogenase subunit beta	NA	NA	NA	NA	NA
AUM33481.1|4606948_4607584_+	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA	NA
AUM33482.1|4607580_4608510_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA	NA
AUM33483.1|4608556_4608847_-	transcriptional regulator	NA	NA	NA	NA	NA
AUM33484.1|4608847_4609159_-	toxin HigB-2	NA	NA	NA	NA	NA
AUM33485.1|4609376_4610306_+	lipase	NA	A0A2K9L5W3	Tupanvirus	44.4	1.3e-07
AUM33486.1|4610391_4610703_+	cytoplasmic protein	NA	NA	NA	NA	NA
AUM33487.1|4610699_4611146_+	transcriptional regulator	NA	NA	NA	NA	NA
AUM33488.1|4611160_4612150_-	acetyltransferase	NA	NA	NA	NA	NA
AUM33489.1|4612146_4612584_-|tRNA	D-aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
>prophage 1
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	0	7428	94727		Enterobacterial_phage(100.0%)	3	NA	NA
AUM33846.1|1977_2802_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33847.1|3147_3678_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33933.1|4176_7428_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	Q9LA58	Enterobacterial_phage	38.0	1.7e-195
>prophage 2
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	10438	10945	94727		Salmonella_phage(100.0%)	1	NA	NA
AUM33850.1|10438_10945_-	superoxide dismutase	NA	Q9MC02	Salmonella_phage	56.8	6.9e-48
>prophage 3
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	16779	17988	94727		Wolbachia_phage(50.0%)	2	NA	NA
AUM33857.1|16779_17097_-	hypothetical protein	NA	A0A1B2LRT6	Wolbachia_phage	43.4	6.9e-06
AUM33858.1|17256_17988_-	type-F conjugative transfer system pilin acetylase TraX	NA	S0F2N7	Stenotrophomonas_phage	34.7	6.1e-05
>prophage 4
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	43089	43314	94727		Pseudomonas_virus(100.0%)	1	NA	NA
AUM33875.1|43089_43314_-	conjugal transfer protein TraR	NA	H2BDI2	Pseudomonas_virus	40.3	6.4e-06
>prophage 5
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	50547	51381	94727		unidentified_phage(100.0%)	1	NA	NA
AUM33887.1|50547_51381_-	N-6 DNA methylase	NA	H7BVT3	unidentified_phage	37.4	4.5e-12
>prophage 6
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	57494	71446	94727		Acidithiobacillus_phage(22.22%)	20	NA	NA
AUM33894.1|57494_58049_-	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	76.9	2.1e-50
AUM33938.1|58412_58601_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33895.1|58741_59059_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33896.1|59385_59577_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33897.1|59619_60126_-	antirestriction protein	NA	A0A1I9S7Y0	Rhodococcus_phage	28.9	1.1e-08
AUM33898.1|60262_60466_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33899.1|60531_61311_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33900.1|61364_61784_-	adenine-specific methyltransferase	NA	NA	NA	NA	NA
AUM33901.1|61794_62016_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33902.1|62015_62693_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	2.8e-28
AUM33939.1|63052_63727_+	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.2	2.0e-79
AUM33903.1|63906_64329_+	protein samA'	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
AUM33904.1|64328_65603_+	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.6	4.3e-155
AUM33905.1|65651_67025_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33906.1|67119_67335_+	hypothetical protein	NA	NA	NA	NA	NA
AUM33907.1|67394_67832_-	hypothetical protein	NA	NA	NA	NA	NA
AUM33908.1|67831_68863_-	chromosome partitioning protein ParB	NA	S5WII0	Leptospira_phage	25.7	1.8e-07
AUM33909.1|68862_69729_-	chromosome partitioning protein ParA	NA	NA	NA	NA	NA
AUM33910.1|70409_70985_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	56.0	7.5e-51
AUM33911.1|70984_71446_-	DNA-binding protein	NA	K4ICM4	Acidithiobacillus_phage	47.6	1.5e-30
>prophage 7
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	80305	82332	94727		Salmonella_phage(50.0%)	2	NA	NA
AUM33923.1|80305_81286_+	protein RepA	NA	J9Q7H0	Salmonella_phage	60.8	7.2e-102
AUM33924.1|81591_82332_-	recombinase	NA	I3WFA4	Macacine_betaherpesvirus	58.6	7.0e-25
>prophage 8
CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	94727	91299	92052	94727	transposase	Leptospira_phage(100.0%)	1	NA	NA
AUM33931.1|91299_92052_+|transposase	transposase	transposase	S5WIU1	Leptospira_phage	43.7	3.6e-45
