The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025778	Francisella tularensis strain 12T0050_FLI chromosome, complete genome	1890738	67523	75338	1890738	tRNA	Staphylococcus_phage(33.33%)	8	NA	NA
AUP74655.1|67523_69308_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	42.6	1.9e-23
AUP74656.1|69255_70401_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AUP74657.1|70420_71413_-	hypothetical protein	NA	NA	NA	NA	NA
AUP74658.1|71494_72019_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	39.7	7.2e-16
AUP74659.1|72015_72459_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	45.7	2.5e-25
AUP74660.1|72468_73680_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	44.3	1.6e-87
AUP74661.1|73672_74278_-	riboflavin synthase	NA	A0A1V0SE20	Indivirus	36.8	2.7e-19
AUP74662.1|74270_75338_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.1	5.3e-50
>prophage 2
CP025778	Francisella tularensis strain 12T0050_FLI chromosome, complete genome	1890738	871389	939747	1890738	tRNA,transposase,protease	Agrobacterium_phage(11.11%)	58	NA	NA
AUP75295.1|871389_871995_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	55.8	1.1e-55
AUP75296.1|872018_873272_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.4	1.1e-126
AUP75297.1|873296_875621_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	47.6	2.2e-194
AUP75298.1|875707_875980_+	HU family DNA-binding protein	NA	Q6QIE5	Burkholderia_phage	57.8	4.2e-20
AUP75299.1|876092_877526_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75300.1|877526_878453_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AUP75301.1|878563_878893_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AUP75302.1|878944_880252_+	GTPase HflX	NA	NA	NA	NA	NA
AUP75303.1|881624_882692_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AUP75304.1|882693_883620_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
AUP75305.1|884101_884695_+	GTP-binding protein	NA	NA	NA	NA	NA
AUP76118.1|886132_886483_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75306.1|886485_886635_+	homocitrate synthase	NA	NA	NA	NA	NA
AUP75307.1|889743_890061_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AUP75308.1|890088_891132_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AUP75309.1|894723_895410_-	BAX inhibitor (BI)-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	42.3	1.0e-30
AUP75310.1|895525_896785_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75311.1|896784_897216_-	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AUP75312.1|897212_897851_-	endonuclease III	NA	NA	NA	NA	NA
AUP75313.1|897843_898473_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
AUP75314.1|898474_899119_-	glutaredoxin 2	NA	NA	NA	NA	NA
AUP75315.1|900750_901251_-	ferritin	NA	NA	NA	NA	NA
AUP75316.1|901456_902440_+	lipoyl synthase	NA	NA	NA	NA	NA
AUP75317.1|902469_903129_+	isoprenoid biosynthesis protein ElbB	NA	NA	NA	NA	NA
AUP75318.1|903144_903891_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AUP75319.1|903987_904503_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AUP75320.1|904584_905775_+	MFS transporter	NA	NA	NA	NA	NA
AUP75321.1|905784_906438_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AUP75322.1|906463_907879_+	DNA recombination protein RmuC	NA	NA	NA	NA	NA
AUP75323.1|907922_908507_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75324.1|908528_908825_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AUP75325.1|909480_910293_+	amidohydrolase	NA	NA	NA	NA	NA
AUP75326.1|911429_912128_-	aldolase	NA	NA	NA	NA	NA
AUP75327.1|912218_912800_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
AUP75328.1|912927_913431_+	isochorismatase	NA	NA	NA	NA	NA
AUP75329.1|913430_914063_+	nicotinamide riboside transporter PnuC	NA	NA	NA	NA	NA
AUP75330.1|915492_915699_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75331.1|915672_916134_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75332.1|918446_919016_-	MFS transporter	NA	NA	NA	NA	NA
AUP75333.1|919008_919935_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75334.1|920225_921194_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.3	9.1e-41
AUP75335.1|921293_921584_+	50S ribosomal protein L25	NA	NA	NA	NA	NA
AUP75336.1|921679_922939_+	DUF21 domain-containing protein	NA	NA	NA	NA	NA
AUP75337.1|924534_924810_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75338.1|924824_925916_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AUP75339.1|925934_926510_-|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AUP75340.1|927394_928246_-	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AUP75341.1|928278_929097_-	prepilin peptidase	NA	NA	NA	NA	NA
AUP75342.1|929100_930516_-	Si-specific NAD(P)(+) transhydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.8	6.6e-32
AUP76119.1|930596_930872_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75343.1|931831_933283_-	MFS transporter	NA	NA	NA	NA	NA
AUP75344.1|933386_934754_-	HslU--HslV peptidase ATPase subunit	NA	A0A2H5BJT2	Erwinia_phage	29.5	4.6e-46
AUP75345.1|934761_935313_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
AUP75346.1|935504_936254_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75347.1|936256_937159_-	lipoate--protein ligase	NA	NA	NA	NA	NA
AUP76120.1|937272_938463_+|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
AUP75348.1|938459_938639_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75349.1|938866_939747_-|transposase	IS630 family transposase	transposase	R4THZ0	Phaeocystis_globosa_virus	21.2	2.5e-05
>prophage 3
CP025778	Francisella tularensis strain 12T0050_FLI chromosome, complete genome	1890738	1529224	1611280	1890738	transposase,protease,tRNA	Phaeocystis_globosa_virus(29.41%)	59	NA	NA
AUP75821.1|1529224_1530241_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	26.1	1.8e-15
AUP75822.1|1530252_1530885_-	starvation protein A	NA	NA	NA	NA	NA
AUP75823.1|1530970_1531285_+	sulfurtransferase TusE	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	48.0	1.7e-17
AUP75824.1|1531275_1531569_+	oxidative damage protection protein	NA	NA	NA	NA	NA
AUP75825.1|1531660_1533421_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AUP75826.1|1533705_1534586_-|transposase	IS630 family transposase	transposase	R4THZ0	Phaeocystis_globosa_virus	21.2	2.5e-05
AUP75827.1|1534744_1535701_-	glycosyltransferase	NA	V5USA4	Oenococcus_phage	38.9	7.9e-53
AUP75828.1|1535799_1536606_+	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AUP75829.1|1536613_1537819_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AUP75830.1|1537828_1539079_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AUP75831.1|1539078_1540176_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AUP75832.1|1541985_1543632_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	54.4	8.5e-172
AUP75833.1|1545135_1545609_-	peptide transporter	NA	NA	NA	NA	NA
AUP75834.1|1545680_1547522_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.6	1.0e-48
AUP75835.1|1547555_1548782_-	MFS transporter	NA	NA	NA	NA	NA
AUP76128.1|1550209_1551379_+	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA	NA
AUP75836.1|1551380_1552025_+	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
AUP75837.1|1552123_1552264_-	50S rRNA methyltransferase	NA	NA	NA	NA	NA
AUP75838.1|1552254_1553134_+|transposase	IS630 family transposase	transposase	R4THZ0	Phaeocystis_globosa_virus	21.2	2.5e-05
AUP75839.1|1555732_1556613_-|transposase	IS630 family transposase	transposase	R4THZ0	Phaeocystis_globosa_virus	21.2	2.5e-05
AUP75840.1|1556674_1557709_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75841.1|1557727_1557976_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75842.1|1558042_1558768_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75843.1|1558948_1559941_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUP75844.1|1562579_1562762_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75845.1|1563949_1564969_-	ABC transporter	NA	NA	NA	NA	NA
AUP75846.1|1565110_1565806_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AUP75847.1|1565808_1566552_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75848.1|1566548_1566785_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75849.1|1566917_1568420_+	APC family permease	NA	NA	NA	NA	NA
AUP75850.1|1568432_1568714_+	DUF4282 domain-containing protein	NA	NA	NA	NA	NA
AUP75851.1|1568727_1568967_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75852.1|1568957_1569837_+|transposase	IS630 family transposase	transposase	R4THZ0	Phaeocystis_globosa_virus	21.2	2.5e-05
AUP75853.1|1569834_1571343_-	glycerol kinase	NA	NA	NA	NA	NA
AUP75854.1|1571410_1572667_-	MFS transporter	NA	NA	NA	NA	NA
AUP75855.1|1572781_1573393_-	hypothetical protein	NA	NA	NA	NA	NA
AUP75856.1|1573526_1574729_+	MFS transporter	NA	NA	NA	NA	NA
AUP75857.1|1576564_1577194_-	peptide ABC transporter	NA	NA	NA	NA	NA
AUP75858.1|1577177_1577438_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75859.1|1580150_1582373_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.8	3.7e-106
AUP75860.1|1582463_1583495_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	40.3	1.8e-15
AUP75861.1|1583491_1584808_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AUP75862.1|1586520_1587150_-	thymidylate kinase	NA	A0A1L2BX49	Bacteriophage	38.1	2.6e-28
AUP75863.1|1587162_1588365_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
AUP75864.1|1588383_1589583_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
AUP75865.1|1589572_1590334_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
AUP75866.1|1590296_1591541_-	phosphopentomutase	NA	NA	NA	NA	NA
AUP75867.1|1591545_1592310_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AUP75868.1|1592329_1595023_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	31.9	1.2e-74
AUP75869.1|1595118_1596087_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AUP75870.1|1596092_1597922_-	lipid A export ATP-binding/permease MsbA	NA	W8CYL7	Bacillus_phage	30.4	6.8e-53
AUP75871.1|1598026_1599109_+|tRNA	tRNA CCA-pyrophosphorylase	tRNA	A0A1S6UAF3	Serratia_phage	53.8	4.4e-52
AUP75872.1|1599148_1599640_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AUP75873.1|1599652_1601026_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AUP75874.1|1601025_1604139_+	multidrug efflux protein	NA	S5VTK5	Leptospira_phage	20.5	1.4e-42
AUP75875.1|1604270_1605551_+	MFS transporter	NA	NA	NA	NA	NA
AUP75876.1|1605795_1606377_+	hypothetical protein	NA	NA	NA	NA	NA
AUP75877.1|1607821_1608835_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
AUP75878.1|1610400_1611280_+|transposase	IS630 family transposase	transposase	R4THZ0	Phaeocystis_globosa_virus	21.2	2.5e-05
