The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP010725	Phaeobacter inhibens strain P88 chromosome, complete genome	3860429	689552	782524	3860429	tail,terminase,portal,capsid,protease,transposase,head,tRNA,integrase	Paracoccus_phage(12.0%)	100	691205:691222	740199:740216
AUQ98045.1|689552_691331_-|protease	Trypsin-like serine protease, typically periplasmic	protease	NA	NA	NA	NA
691205:691222	attL	ATGAGGCGCGCGCGGCGA	NA	NA	NA	NA
AUQ98046.1|691600_692530_+|tRNA	glycyl-tRNA synthetase alpha subunit	tRNA	NA	NA	NA	NA
AUQ98047.1|692563_693097_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98048.1|693218_694427_+	sodium/glutamate symport carrier protein GltS	NA	NA	NA	NA	NA
AUQ98049.1|694436_696665_+|tRNA	glycyl-tRNA synthetase beta subunit	tRNA	NA	NA	NA	NA
AUQ98050.1|696829_699430_+	pyruvate, phosphate dikinase PpdK	NA	A0A2D2W2B1	Stenotrophomonas_phage	28.4	8.2e-36
AUQ98051.1|699601_700249_+	cell wall hydrolase-like protein	NA	A0A1B0UXM4	Roseobacter_phage	50.0	1.2e-28
AUQ98052.1|700398_701319_+	dihydroneopterin aldolase-like protein	NA	NA	NA	NA	NA
AUQ98053.1|701315_702311_+	dihydropteroate synthase FolP	NA	S4W084	Pandoravirus	29.6	5.2e-23
AUQ98054.1|702333_703680_+	phosphoglucosamine mutase GlmM	NA	NA	NA	NA	NA
AUQ98055.1|703762_704671_-	Permease of the drug/metabolite transporter (DMT) superfamily protein	NA	NA	NA	NA	NA
AUQ98056.1|704758_705673_-	Permease of the drug/metabolite transporter (DMT) superfamily protein	NA	NA	NA	NA	NA
AUQ98057.1|705762_706785_-	ketol-acid reductoisomerase IlvC	NA	NA	NA	NA	NA
AUQ98058.1|706916_707372_+	putative transcriptional regulator, AsnC family	NA	NA	NA	NA	NA
AUQ98059.1|707368_707827_+	putative transcriptional regulator, AsnC family	NA	NA	NA	NA	NA
AUQ98060.1|707828_708521_-	Peptidase M50B-like protein	NA	NA	NA	NA	NA
AUQ98061.1|708522_709719_-	putative FAD-dependent hydroxylase	NA	NA	NA	NA	NA
AUQ98062.1|709824_710070_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98063.1|710247_710889_-	putative pyrimidine 5'-nucleotidase	NA	NA	NA	NA	NA
AUQ98064.1|711067_711721_+	transcriptional regulator, GntR family	NA	NA	NA	NA	NA
AUQ98065.1|711740_713681_-	glycosyl transferase-like protein	NA	NA	NA	NA	NA
AUQ98066.1|713817_714981_-	carbamoyl-phosphate synthase small chain	NA	R4TGJ8	Halovirus	32.8	4.9e-41
AUQ98067.1|715210_715684_+	hypothetical protein	NA	A0A292GL36	Xanthomonas_phage	41.7	3.7e-19
AUQ98068.1|715717_716503_-	prephenate dehydrogenase-like protein	NA	NA	NA	NA	NA
AUQ98069.1|716727_717126_-	Integral membrane protein	NA	NA	NA	NA	NA
AUQ98070.1|717356_719030_-	cytochrome c oxidase subunit 1-beta	NA	R9VX24	Flavobacterium_phage	35.8	8.7e-07
AUQ98071.1|719358_719784_+	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase	NA	NA	NA	NA	NA
AUQ98072.1|720210_722133_+	putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily)	NA	NA	NA	NA	NA
AUQ98073.1|722165_722837_-	octanoyltransferase LipB	NA	NA	NA	NA	NA
AUQ98074.1|722960_724622_+	Putative peptidoglycan binding protein domain protein	NA	NA	NA	NA	NA
AUQ98075.1|725005_725968_+|integrase	putative phage integrase protein	integrase	A0A1B1P9F9	Acinetobacter_phage	45.9	9.6e-67
AUQ98076.1|725964_726195_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98077.1|726191_726845_-	Site-specific recombinase, DNA invertase Pin-like protein	NA	A0A1S6L009	Salmonella_phage	45.8	1.1e-29
AUQ98078.1|726831_727050_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98079.1|727097_727841_-	hypothetical protein	NA	A0A0U1SZL2	Pseudomonas_phage	40.3	4.1e-33
AUQ98080.1|727943_728216_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98081.1|728227_728497_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98082.1|728493_728805_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98083.1|728916_729504_-	N-acyl-L-homoserine lactone synthetase	NA	NA	NA	NA	NA
AUQ98084.1|729563_730220_-	Response regulator	NA	NA	NA	NA	NA
AUQ98085.1|730287_730467_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98086.1|731041_732151_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98087.1|732143_732578_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98088.1|732577_733045_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
AUQ98089.1|733025_733682_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98090.1|733867_734452_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98091.1|734448_735204_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98092.1|735819_736299_+|terminase	putative phage terminase, small subunit, P27 family	terminase	NA	NA	NA	NA
AUQ98093.1|736295_738131_+|terminase	Phage terminase-like protein, large subunit	terminase	A0A0U2C138	Paracoccus_phage	48.2	1.2e-139
AUQ98094.1|738130_739426_+|portal	phage portal protein	portal	B4UTP1	Rhizobium_phage	42.7	8.6e-79
AUQ98095.1|739438_740038_+|head,protease	putative phage prohead protease, HK97 family	head,protease	A0A0F7L115	uncultured_marine_virus	54.1	7.1e-44
AUQ98096.1|740104_741385_+|capsid	phage major capsid protein, HK97 family	capsid	B4UTP3	Rhizobium_phage	49.1	1.2e-80
740199:740216	attR	ATGAGGCGCGCGCGGCGA	NA	NA	NA	NA
AUQ98097.1|741471_741807_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98098.1|741862_742444_+	phage hypothetical protein gp8 family protein	NA	NA	NA	NA	NA
AUQ98099.1|742443_742782_+|head,tail	putative phage head-tail adaptor	head,tail	A0A0U2BXJ0	Paracoccus_phage	41.5	2.9e-10
AUQ98100.1|742783_743257_+	hypothetical protein	NA	A0A0U2C0P4	Paracoccus_phage	32.1	9.0e-10
AUQ98101.1|743253_743616_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98102.1|743663_744110_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98103.1|744106_744487_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98104.1|744498_744804_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98105.1|744804_749340_+|tail	putative phage tail tape measure protein	tail	I6S2X0	Marinomonas_phage	38.3	4.4e-21
AUQ98106.1|749336_750221_+	hypothetical protein	NA	R9TJ58	Synechococcus_phage	32.0	4.3e-37
AUQ98107.1|750220_750643_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98108.1|750653_750989_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98109.1|750988_751834_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98110.1|751830_752304_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98111.1|752284_752629_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98112.1|752640_753018_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98113.1|753014_753227_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98114.1|753207_753873_+	hypothetical protein	NA	E3PZB7	Roseovarius_sp._217_phage	40.8	2.0e-34
AUQ98115.1|753872_754172_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98116.1|754125_754362_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98117.1|754610_755201_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98118.1|756293_757259_-	Retron-type reverse transcriptase	NA	NA	NA	NA	NA
AUQ98119.1|757258_758167_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98120.1|758462_758750_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98121.1|758832_759105_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ98122.1|759797_760664_-	Hemolysin-type calcium-binding protein repeat protein (2 copies)	NA	NA	NA	NA	NA
AUQ98123.1|760749_761442_-	hypothetical protein	NA	B7SYF4	Stenotrophomonas_phage	37.0	1.3e-20
AUQ98124.1|761705_761840_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98125.1|762108_762315_-	putative resolvase	NA	NA	NA	NA	NA
AUQ98126.1|763803_765384_+	putative extracellular solute-binding protein	NA	NA	NA	NA	NA
AUQ98127.1|765496_766477_+	putative peptide ABC transporter, permease protein	NA	NA	NA	NA	NA
AUQ98128.1|766476_767391_+	dipeptide transport system permease protein DppC	NA	NA	NA	NA	NA
AUQ98129.1|767390_768371_+	putative dipeptide transport ATP-binding protein DppD	NA	G9BWD6	Planktothrix_phage	29.0	2.7e-16
AUQ98130.1|768367_769333_+	dipeptide transport ATP-binding protein DppF	NA	G3M9Y6	Bacillus_virus	32.8	7.8e-16
AUQ98131.1|769351_770248_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AUQ98132.1|770286_770499_-|transposase	putative transposase	transposase	U5P429	Shigella_phage	38.2	1.9e-07
AUQ98133.1|770520_771231_-|transposase	putative transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.7	5.0e-36
AUQ98134.1|771252_771495_-|transposase	putative transposase	transposase	NA	NA	NA	NA
AUQ98135.1|771734_774032_-	putative adenosylcobalamin(B12)-dependent ribonucleotide reductase	NA	M4QT32	Loktanella_phage	66.4	7.4e-299
AUQ98136.1|774218_774650_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98137.1|774749_775067_-	putative protein in bacteria	NA	NA	NA	NA	NA
AUQ98138.1|775323_776769_+	pyruvate kinase PykA	NA	NA	NA	NA	NA
AUQ98139.1|776804_777026_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ98140.1|777213_777414_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AUQ98141.1|777429_777795_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AUQ98142.1|778015_779089_+|tRNA	phenylalanyl-tRNA synthetase alpha chain	tRNA	A0A2K9L3A8	Tupanvirus	36.1	3.2e-26
AUQ98143.1|779216_780038_+	Poly(3-hydroxybutyrate) depolymerase	NA	NA	NA	NA	NA
AUQ98144.1|780127_782524_+|tRNA	phenylalanyl-tRNA synthetase beta chain	tRNA	NA	NA	NA	NA
>prophage 2
CP010725	Phaeobacter inhibens strain P88 chromosome, complete genome	3860429	1896544	1932373	3860429	tail,portal,capsid,protease,head,tRNA	Paracoccus_phage(27.27%)	34	NA	NA
AUQ99179.1|1896544_1897615_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AUQ99180.1|1897718_1901396_-	putative protein involved in outer membrane biogenesis	NA	NA	NA	NA	NA
AUQ99181.1|1901541_1902003_+	putative peroxiredoxin Bcp	NA	NA	NA	NA	NA
AUQ99182.1|1902144_1903026_+	putative protein in bacteria	NA	NA	NA	NA	NA
AUQ99183.1|1903449_1904781_+	putative peptidase M23 family protein	NA	S5M424	Bacillus_phage	44.3	1.1e-17
AUQ99184.1|1904770_1905313_+	Integral membrane protein CcmA involved in cell shape determination	NA	NA	NA	NA	NA
AUQ99185.1|1905555_1906800_+	hemolysin-type calcium-binding repeat-containing protein	NA	NA	NA	NA	NA
AUQ99186.1|1907041_1908538_+	hemolysin-type calcium-binding repeat-containing protein	NA	NA	NA	NA	NA
AUQ99187.1|1908625_1909633_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ99188.1|1909841_1910393_-	putative peptidyl-prolyl cis-trans isomerases (cyclophilin)	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	57.7	2.0e-40
AUQ99189.1|1910385_1910892_-	putative peptidyl-prolyl cis-trans isomerase A	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	55.0	9.6e-42
AUQ99190.1|1911073_1912264_+	phosphoglycerate kinase Pgk	NA	NA	NA	NA	NA
AUQ99191.1|1912520_1912820_+	septum formation initiator-like protein	NA	NA	NA	NA	NA
AUQ99192.1|1913120_1914134_+	pyruvate dehydrogenase E1 component subunit alpha	NA	NA	NA	NA	NA
AUQ99193.1|1914150_1915536_+	pyruvate dehydrogenase E1 component subunit beta	NA	NA	NA	NA	NA
AUQ99194.1|1915548_1916874_+	dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	NA	NA	NA	NA	NA
AUQ99195.1|1917057_1918146_-	Glycolipid sulfotransferase	NA	NA	NA	NA	NA
AUQ99196.1|1918171_1918987_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
AUQ99197.1|1919279_1919576_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ99198.1|1919588_1923581_-	putative gene transfer agent protein	NA	A0A0B5A7K5	Paracoccus_phage	37.3	3.3e-222
AUQ99199.1|1923580_1924051_-	putative phage cell wall peptidase, NlpC/P60 family	NA	A0A1V0DYB6	Dinoroseobacter_phage	47.1	8.6e-29
AUQ99200.1|1924047_1924998_-	hypothetical protein	NA	A0A1V0DY93	Dinoroseobacter_phage	38.7	4.6e-53
AUQ99201.1|1924997_1925630_-	putative gene transfer agent protein	NA	A0A0B5A2K3	Paracoccus_phage	49.5	7.7e-57
AUQ99202.1|1925645_1926302_-|tail	putative gene transfer agent tail tape measure protein	tail	D6PFD6	uncultured_phage	33.5	1.5e-10
AUQ99203.1|1926294_1926552_-	gene transfer agent (GTA) protein	NA	NA	NA	NA	NA
AUQ99204.1|1926548_1926953_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ99205.1|1926966_1927380_-|tail	putative gene transfer agent major tail protein	tail	NA	NA	NA	NA
AUQ99206.1|1927482_1927890_-	putative gene transfer agent protein	NA	NA	NA	NA	NA
AUQ99207.1|1927886_1928258_-|head,tail	putative gene transfer agent head-tail adaptor	head,tail	NA	NA	NA	NA
AUQ99208.1|1928254_1928902_-	putative gene transfer agent protein	NA	NA	NA	NA	NA
AUQ99209.1|1929082_1930267_-|capsid	gene transfer agent major capsid protein	capsid	B0VK33	Azospirillum_phage	39.0	9.7e-61
AUQ99210.1|1930315_1930936_-|head,protease	putative gene transfer agent prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	54.0	5.0e-32
AUQ99211.1|1930968_1931187_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ99212.1|1931179_1932373_-|portal	putative gene transfer agent portal protein	portal	W8ECU7	Geobacillus_phage	36.6	9.2e-59
>prophage 1
CP010733	Phaeobacter inhibens strain P88 plasmid pP88_h, complete sequence	41384	11039	22616	41384	protease	Emiliania_huxleyi_virus(33.33%)	12	NA	NA
AUR01969.1|11039_14081_-	Domain protein of unknown function	NA	G8DH58	Emiliania_huxleyi_virus	36.2	1.3e-117
AUR01970.1|14077_14365_-	hypothetical protein	NA	G8DH57	Emiliania_huxleyi_virus	47.9	6.2e-14
AUR01971.1|14529_15114_-	hypothetical protein	NA	NA	NA	NA	NA
AUR01972.1|15110_15770_-	hypothetical protein	NA	A0A0U2BXF8	Paracoccus_phage	31.3	2.5e-18
AUR01973.1|15766_18214_-	hypothetical protein	NA	A0A0H4ADF4	Pseudoalteromonas_phage	41.0	1.2e-41
AUR01974.1|18260_18611_+	hypothetical protein	NA	NA	NA	NA	NA
AUR01975.1|18529_18880_-	hypothetical protein	NA	NA	NA	NA	NA
AUR01976.1|18888_19314_-	hypothetical protein	NA	NA	NA	NA	NA
AUR01977.1|19364_19778_-	hypothetical protein	NA	NA	NA	NA	NA
AUR01978.1|19774_20098_-	hypothetical protein	NA	NA	NA	NA	NA
AUR01979.1|20103_20436_-	hypothetical protein	NA	A0A2I7QRW1	Vibrio_phage	40.7	2.9e-07
AUR01980.1|20528_22616_-|protease	Protease subunit of ATP-dependent Clp protease	protease	A0A0A8IKZ4	Aurantimonas_phage	28.8	5.8e-16
