The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025500	Lactococcus lactis subsp. lactis strain G50 chromosome, complete genome	2346663	399902	412031	2346663		Streptococcus_phage(40.0%)	14	NA	NA
AUS68911.1|399902_400220_+	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
AUS68912.1|400305_400932_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
AUS68913.1|401094_402435_+	NADH oxidase	NA	NA	NA	NA	NA
AUS68914.1|402523_402913_+	single-stranded DNA-binding protein	NA	A0A0K0MWE1	Streptococcus_phage	45.0	1.4e-24
AUS68915.1|403032_403317_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	44.1	3.1e-13
AUS68916.1|403404_405033_+	molecular chaperone GroEL	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
AUS68917.1|405077_405890_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.1	3.1e-34
AUS68918.1|406060_407503_-	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.0	1.4e-32
AUS68919.1|407495_408197_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	39.7	1.2e-42
AUS68920.1|408374_409010_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	65.0	7.0e-74
AUS68921.1|409142_410003_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	45.5	3.0e-67
AUS68922.1|410054_410837_+	Signal peptidase	NA	NA	NA	NA	NA
AUS68923.1|410829_411156_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
AUS68924.1|411155_412031_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	65.4	6.6e-99
>prophage 2
CP025500	Lactococcus lactis subsp. lactis strain G50 chromosome, complete genome	2346663	996373	1019827	2346663		Staphylococcus_phage(21.43%)	22	NA	NA
AUS69438.1|996373_997066_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.4	2.7e-31
AUS69439.1|997058_997994_+	ABC transporter permease	NA	NA	NA	NA	NA
AUS69440.1|998096_999074_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	66.0	1.9e-118
AUS69441.1|999423_1001592_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.0	8.6e-257
AUS69442.1|1001727_1002150_-	protein NrdI	NA	A0A142F1R4	Bacillus_phage	37.3	2.3e-12
AUS69443.1|1002151_1002370_-	NrdH-redoxin	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
AUS69444.1|1002543_1003185_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AUS69445.1|1003459_1005394_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.5	1.1e-125
AUS69446.1|1005598_1006138_+	cysteine hydrolase	NA	NA	NA	NA	NA
AUS69447.1|1006130_1006964_+	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.4	3.1e-21
AUS69448.1|1006960_1007410_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUS69449.1|1007684_1010159_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	1.6e-97
AUS69450.1|1010184_1011090_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
AUS69451.1|1011558_1012647_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.8	1.4e-50
AUS69452.1|1012646_1013297_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	44.1	3.2e-42
AUS69453.1|1013305_1014502_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.5	1.2e-111
AUS69454.1|1014529_1014994_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.7	1.8e-39
AUS69455.1|1015096_1015549_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
AUS69456.1|1015609_1016515_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	5.4e-11
AUS69457.1|1016662_1017106_+	hypothetical protein	NA	NA	NA	NA	NA
AUS69458.1|1017245_1018868_+	hypothetical protein	NA	NA	NA	NA	NA
AUS69459.1|1018870_1019827_+	glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	4.0e-49
>prophage 3
CP025500	Lactococcus lactis subsp. lactis strain G50 chromosome, complete genome	2346663	1504133	1514435	2346663		Synechococcus_phage(33.33%)	8	NA	NA
AUS69876.1|1504133_1505690_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	45.6	4.0e-70
AUS69877.1|1505865_1506408_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.9	1.8e-09
AUS69878.1|1506544_1507582_-	epimerase	NA	NA	NA	NA	NA
AUS69879.1|1507712_1508243_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AUS69880.1|1508293_1509883_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	22.4	4.7e-10
AUS69881.1|1510049_1510598_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	30.6	8.0e-18
AUS69882.1|1510626_1511643_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	M4QRQ6	Synechococcus_phage	41.8	6.4e-61
AUS69883.1|1511831_1514435_-	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	32.7	1.2e-124
>prophage 4
CP025500	Lactococcus lactis subsp. lactis strain G50 chromosome, complete genome	2346663	1590922	1609849	2346663	integrase,holin	Lactococcus_phage(70.0%)	26	1582320:1582334	1606996:1607010
1582320:1582334	attL	CACGGCACTATGAAG	NA	NA	NA	NA
AUS69954.1|1590922_1591702_-|holin	phage holin	holin	Q9AZW7	Lactococcus_phage	93.1	2.5e-121
AUS69955.1|1591701_1591977_-	Holin	NA	A0A182BQ79	Lactococcus_phage	56.9	1.6e-14
AUS69956.1|1591989_1592211_-|holin	holin	holin	A0A191KBQ1	Streptococcus_virus	66.7	1.5e-20
AUS69957.1|1592252_1592645_-	hypothetical protein	NA	Q1RND0	Lactococcus_phage	44.3	2.3e-11
AUS69958.1|1593256_1593988_-	hypothetical protein	NA	Q6SEC2	Lactobacillus_prophage	41.0	4.8e-26
AUS69959.1|1594268_1594658_-	hypothetical protein	NA	A5GYP6	Lactococcus_phage	93.0	8.1e-65
AUS69960.1|1594751_1595045_+	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
AUS69961.1|1595359_1595548_-	hypothetical protein	NA	NA	NA	NA	NA
AUS69962.1|1595562_1595805_-	hypothetical protein	NA	A5GZ49	Lactococcus_phage	80.0	2.5e-32
AUS69963.1|1597122_1597923_-	recombinase RecT	NA	Q9AZQ0	Lactococcus_phage	60.5	1.9e-76
AUS69964.1|1597915_1598752_-	hypothetical protein	NA	A0A1P8BKZ1	Lactococcus_phage	72.8	4.0e-93
AUS69965.1|1598854_1599091_-	hypothetical protein	NA	A0A1P8BMJ7	Lactococcus_phage	94.9	2.8e-36
AUS69966.1|1599185_1599410_+	hypothetical protein	NA	NA	NA	NA	NA
AUS69967.1|1599640_1599979_-	hypothetical protein	NA	A0A1B1IMQ1	Lactococcus_phage	96.4	1.9e-57
AUS69968.1|1599992_1600793_-	phage antirepressor	NA	Q38330	Lactococcus_phage	70.3	1.5e-94
AUS69969.1|1600810_1601059_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUS69970.1|1601213_1601717_+	hypothetical protein	NA	NA	NA	NA	NA
AUS69971.1|1602265_1602751_+	XRE family transcriptional regulator	NA	Q9G0E8	Lactococcus_phage	55.8	3.3e-31
AUS69972.1|1602761_1603349_+	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	85.6	1.8e-92
AUS69973.1|1603363_1603564_+	hypothetical protein	NA	Q9T1Z0	Lactococcus_phage	93.5	7.1e-25
AUS69974.1|1603619_1603958_+	hypothetical protein	NA	S5MNN8	Brevibacillus_phage	66.7	3.0e-15
AUS69975.1|1604058_1604934_+	hypothetical protein	NA	NA	NA	NA	NA
AUS69976.1|1605063_1606203_+|integrase	site-specific integrase	integrase	A0A1B1IMP1	Lactococcus_phage	96.6	6.6e-208
AUS69977.1|1606305_1607379_-	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.3	2.0e-60
1606996:1607010	attR	CTTCATAGTGCCGTG	NA	NA	NA	NA
AUS69978.1|1607441_1608374_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	30.5	2.8e-23
AUS69979.1|1608556_1609849_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.9	1.6e-61
>prophage 5
CP025500	Lactococcus lactis subsp. lactis strain G50 chromosome, complete genome	2346663	1657598	1698060	2346663	capsid,protease,integrase,head,tail,portal,terminase,holin	Lactococcus_phage(84.09%)	51	1656137:1656152	1702105:1702120
1656137:1656152	attL	TGGTTCTTGCTGGACT	NA	NA	NA	NA
AUS70020.1|1657598_1658003_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	48.8	7.4e-29
AUS70021.1|1658108_1659290_-	hypothetical protein	NA	A9YX16	Burkholderia_phage	29.2	1.6e-15
AUS70022.1|1659369_1660149_-|holin	phage holin	holin	A0A1P8BKR7	Lactococcus_phage	95.8	3.4e-123
AUS70023.1|1660148_1660424_-	Holin	NA	A0A182BQ79	Lactococcus_phage	59.7	2.4e-15
AUS70024.1|1660436_1660658_-|holin	holin	holin	A0A191KBQ1	Streptococcus_virus	63.9	4.5e-20
AUS70025.1|1660675_1661911_-	hypothetical protein	NA	Q1RNC2	Lactococcus_phage	47.0	3.5e-29
AUS70026.1|1662044_1664483_-	hypothetical protein	NA	A0A059NT86	Lactococcus_phage	77.3	0.0e+00
AUS70027.1|1664493_1664859_-	hypothetical protein	NA	A0A059NT91	Lactococcus_phage	95.0	2.3e-61
AUS70028.1|1664870_1668890_-|tail	phage tail protein	tail	A0A059NT57	Lactococcus_phage	70.5	0.0e+00
AUS70029.1|1668920_1669292_-	hypothetical protein	NA	A0A172LN91	Lactococcus_phage	72.4	1.3e-43
AUS70030.1|1669315_1669726_-	hypothetical protein	NA	A0A182BQ86	Lactococcus_phage	75.7	7.0e-51
AUS70031.1|1669801_1670041_-	hypothetical protein	NA	A5GYM0	Lactococcus_phage	60.3	2.8e-07
AUS70032.1|1670066_1670480_-|tail	phage tail protein	tail	A0A182BQ87	Lactococcus_phage	83.1	5.2e-62
AUS70033.1|1670492_1670855_-	hypothetical protein	NA	A0A182BQ88	Lactococcus_phage	92.5	7.5e-57
AUS70034.1|1670854_1671403_-	hypothetical protein	NA	A0A059NT55	Lactococcus_phage	98.4	1.1e-96
AUS70035.1|1671386_1671734_-	hypothetical protein	NA	A0A182BQ90	Lactococcus_phage	82.5	6.3e-45
AUS70036.1|1671714_1672047_-	hypothetical protein	NA	A0A059NT99	Lactococcus_phage	100.0	1.3e-55
AUS70037.1|1672066_1673185_-|capsid	major capsid protein	capsid	A0A182BQ73	Lactococcus_phage	84.0	1.5e-148
AUS70038.1|1673196_1673823_-|capsid	phage capsid protein	capsid	A0A059NT87	Lactococcus_phage	92.8	1.0e-72
AUS70039.1|1673999_1674272_+	DUF3892 domain-containing protein	NA	A0A059NT53	Lactococcus_phage	98.9	4.1e-39
AUS70040.1|1674529_1675636_-|head	phage head morphogenesis protein	head	A0A059NT80	Lactococcus_phage	95.9	5.7e-196
AUS70041.1|1675780_1676068_-|protease	ribosomal-processing cysteine protease Prp	protease	A0A182BQ95	Lactococcus_phage	94.7	4.7e-46
AUS70042.1|1676188_1677697_-|portal	phage portal protein	portal	A0A182BQ97	Lactococcus_phage	97.8	1.2e-244
AUS70043.1|1677705_1678941_-|terminase	PBSX family phage terminase large subunit	terminase	A0A182BQ98	Lactococcus_phage	99.0	2.6e-242
AUS70044.1|1678930_1679443_-|terminase	terminase small subunit	terminase	A0A182BQ99	Lactococcus_phage	91.2	9.3e-77
AUS70045.1|1680651_1681074_-	hypothetical protein	NA	A0A182BQA1	Lactococcus_phage	98.6	3.0e-57
AUS70046.1|1681713_1681923_+	hypothetical protein	NA	NA	NA	NA	NA
AUS70047.1|1681973_1682195_-	hypothetical protein	NA	A0A182BQA2	Lactococcus_phage	93.2	8.4e-35
AUS70048.1|1682191_1682416_-	hypothetical protein	NA	A0A1P8BMS6	Lactococcus_phage	50.0	5.6e-10
AUS70049.1|1682563_1683232_+	GMP synthase	NA	NA	NA	NA	NA
AUS70050.1|1683271_1683682_-	hypothetical protein	NA	A5GZ50	Lactococcus_phage	97.0	3.2e-72
AUS70051.1|1683694_1683937_-	hypothetical protein	NA	A5GZ49	Lactococcus_phage	87.5	1.7e-36
AUS70714.1|1683929_1684775_-	prephenate dehydrogenase	NA	A5GZ47	Lactococcus_phage	65.6	6.5e-67
AUS70052.1|1685015_1686011_-	hypothetical protein	NA	A0A1P8BLG1	Lactococcus_phage	81.0	1.8e-129
AUS70053.1|1686012_1686750_-	phage recombination protein Bet	NA	A0A1B1IMV3	Lactococcus_phage	96.3	1.6e-130
AUS70054.1|1686873_1687089_-	hypothetical protein	NA	Q38272	Lactococcus_phage	98.6	5.3e-34
AUS70055.1|1687088_1687289_-	XRE family transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	43.5	1.5e-06
AUS70056.1|1687437_1687638_+	hypothetical protein	NA	NA	NA	NA	NA
AUS70057.1|1687912_1688149_-	DNA-binding protein	NA	A0A059NT59	Lactococcus_phage	100.0	4.3e-37
AUS70058.1|1688161_1688965_-	DNA-binding protein	NA	A0A1P8BLA9	Lactococcus_phage	67.5	1.0e-90
AUS70059.1|1688980_1689229_-	XRE family transcriptional regulator	NA	A0A097BYF3	Leuconostoc_phage	55.7	1.5e-11
AUS70060.1|1689323_1690232_+	hypothetical protein	NA	NA	NA	NA	NA
AUS70061.1|1690213_1690411_-	hypothetical protein	NA	NA	NA	NA	NA
AUS70062.1|1690673_1691198_+	phage repressor protein	NA	Q9AZW3	Lactococcus_phage	50.6	3.0e-30
AUS70063.1|1691208_1691796_+	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	83.0	6.9e-92
AUS70064.1|1691847_1692048_+	hypothetical protein	NA	A0A1P8BM79	Lactococcus_phage	93.8	2.0e-27
AUS70065.1|1692089_1693085_+	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	51.1	3.8e-90
AUS70066.1|1693324_1694458_+|integrase	site-specific integrase	integrase	A0A059NT56	Lactococcus_phage	97.6	6.0e-201
AUS70067.1|1694651_1695626_-	D-ribose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUS70068.1|1695637_1696579_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AUS70069.1|1696581_1698060_-	D-xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.9	1.3e-14
1702105:1702120	attR	AGTCCAGCAAGAACCA	NA	NA	NA	NA
>prophage 6
CP025500	Lactococcus lactis subsp. lactis strain G50 chromosome, complete genome	2346663	1785336	1795195	2346663	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
AUS70143.1|1785336_1786098_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
AUS70144.1|1786263_1787073_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
AUS70145.1|1787106_1788000_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AUS70146.1|1787999_1788923_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AUS70147.1|1789043_1789895_-	phosphate ABC transporter substrate-binding protein	NA	E3SNT9	Prochlorococcus_phage	27.5	3.2e-05
AUS70148.1|1790241_1791138_-	phosphate ABC transporter substrate-binding protein	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
AUS70149.1|1791415_1791883_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	56.6	2.7e-43
AUS70150.1|1791914_1792490_-	esterase	NA	NA	NA	NA	NA
AUS70151.1|1792576_1795195_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.5	3.2e-64
