assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002900365.1_ASM290036v1	CP025979	Escherichia marmotae strain HT073016 chromosome, complete genome	1	727000-727123	1	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,cas3,RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	NA|64aa|up_6|CP025979.1_720437_720629_-,NA|75aa|down_7|CP025979.1_735714_735939_-,NA|30aa|down_8|CP025979.1_736025_736115_+	NA|424aa|up_9|CP025979.1_717579_718851_+	PRK10948, PRK10948, Fe-S cluster assembly protein SufD	NA|407aa|up_8|CP025979.1_718847_720068_+	PRK09295, PRK09295, cysteine desulfurase SufS	NA|139aa|up_7|CP025979.1_720080_720497_+	PRK09296, PRK09296, cysteine desulfuration protein SufE	NA|64aa|up_6|CP025979.1_720437_720629_-	NA	NA|335aa|up_5|CP025979.1_720645_721650_+	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|79aa|up_4|CP025979.1_721714_721951_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_3|CP025979.1_722261_723674_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_2|CP025979.1_724214_724424_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|535aa|up_1|CP025979.1_724827_726432_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|CP025979.1_726557_726863_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|CP025979.1_727437_728694_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|CP025979.1_728734_730108_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|209aa|down_2|CP025979.1_730323_730950_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|CP025979.1_731009_732158_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|CP025979.1_732448_733660_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|CP025979.1_733772_734705_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|CP025979.1_734701_735727_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|75aa|down_7|CP025979.1_735714_735939_-	NA	NA|30aa|down_8|CP025979.1_736025_736115_+	NA	NA|390aa|down_9|CP025979.1_736280_737450_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCA_002900365.1_ASM290036v1	CP025979	Escherichia marmotae strain HT073016 chromosome, complete genome	2	1505939-1506082	1	PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	DEDDh,DinG,cas3,RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	Type I-F	TTTCTAAGCTGCCTGTACGGCAGTGAACT	29	0	0	NA	NA	I-F	2	2	TypeI-F	DEDDh,DinG,cas3,RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	NA,NA	NA|574aa|up_9|CP025979.1_1489301_1491023_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_8|CP025979.1_1491067_1491772_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_7|CP025979.1_1492056_1492275_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|183aa|up_6|CP025979.1_1496480_1497029_-	PRK15220, PRK15220, fimbrial protein YehD	cas6f|185aa|up_5|CP025979.1_1497415_1497970_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|334aa|up_4|CP025979.1_1497980_1498982_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|308aa|up_3|CP025979.1_1498992_1499916_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|436aa|up_2|CP025979.1_1499912_1501220_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1078aa|up_1|CP025979.1_1501548_1504782_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|328aa|up_0|CP025979.1_1504778_1505762_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|759aa|down_0|CP025979.1_1506305_1508582_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|CP025979.1_1508612_1508933_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|CP025979.1_1509255_1509480_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|CP025979.1_1509552_1511499_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|CP025979.1_1511495_1512611_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|331aa|down_5|CP025979.1_1512727_1513720_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|CP025979.1_1513716_1515375_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|CP025979.1_1515799_1516495_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|CP025979.1_1516635_1517535_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|CP025979.1_1517677_1519330_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCA_002900365.1_ASM290036v1	CP025979	Escherichia marmotae strain HT073016 chromosome, complete genome	3	1631652-1631796	2	CRISPRCasFinder	no	RT	DEDDh,DinG,cas3,RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	Unclear	GTAGGTCGGATAAGATGCACAAGCATCGCATCCGACAATAAGTGCCGGATGCG	53	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	NA,NA	NA|330aa|up_9|CP025979.1_1619550_1620540_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|CP025979.1_1620936_1621845_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|CP025979.1_1622037_1624059_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|227aa|up_6|CP025979.1_1624632_1625313_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|CP025979.1_1625305_1626061_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|CP025979.1_1626047_1627202_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|CP025979.1_1627198_1628239_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|CP025979.1_1628325_1629615_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|CP025979.1_1629673_1630150_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|CP025979.1_1630301_1631585_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|478aa|down_0|CP025979.1_1634147_1635581_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_1|CP025979.1_1635656_1636709_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_2|CP025979.1_1636891_1637845_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_3|CP025979.1_1637886_1638882_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_4|CP025979.1_1639036_1639855_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_5|CP025979.1_1639855_1640914_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_6|CP025979.1_1640916_1641606_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_7|CP025979.1_1641605_1642379_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|403aa|down_8|CP025979.1_1642594_1643803_+	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	RT|451aa|down_9|CP025979.1_1643929_1645282_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase
