The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026105	Paraburkholderia hospita strain DSM 17164 chromosome 1, complete sequence	4021292	2126568	2133203	4021292	transposase	Moraxella_phage(16.67%)	12	NA	NA
AUT68536.1|2126568_2126844_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PH90	Moraxella_phage	60.9	9.5e-20
AUT68537.1|2126966_2127275_+	hypothetical protein	NA	NA	NA	NA	NA
AUT70215.1|2127309_2127663_-	DUF1353 domain-containing protein	NA	A0A0E3Y4V5	Fusobacterium_phage	38.3	1.3e-08
AUT68538.1|2128167_2128443_-	hypothetical protein	NA	NA	NA	NA	NA
AUT68539.1|2128453_2128810_-	hypothetical protein	NA	NA	NA	NA	NA
AUT68540.1|2128983_2129448_-	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	Q9ZXE4	Bacillus_phage	39.5	1.4e-18
AUT68541.1|2129449_2129698_-	hypothetical protein	NA	NA	NA	NA	NA
AUT68542.1|2129852_2130065_-	hypothetical protein	NA	NA	NA	NA	NA
AUT68543.1|2130106_2131066_-|transposase	IS5/IS1182 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	40.8	1.3e-55
AUT70216.1|2131369_2131798_-	RusA family crossover junction endodeoxyribonuclease	NA	A9YWY9	Burkholderia_phage	52.5	3.2e-30
AUT68544.1|2131974_2132190_-	hypothetical protein	NA	NA	NA	NA	NA
AUT68545.1|2132186_2133203_-	helix-turn-helix domain-containing protein	NA	Q6JIG0	Burkholderia_virus	57.7	5.7e-102
>prophage 2
CP026105	Paraburkholderia hospita strain DSM 17164 chromosome 1, complete sequence	4021292	2877750	2952205	4021292	transposase	Trichoplusia_ni_ascovirus(28.57%)	54	NA	NA
AUT69140.1|2877750_2879088_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
AUT69141.1|2879912_2880527_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69142.1|2882185_2883499_+	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
AUT69143.1|2883517_2884195_+	carbonic anhydrase	NA	NA	NA	NA	NA
AUT69144.1|2884671_2885484_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AUT69145.1|2885490_2886453_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUT69146.1|2887520_2888615_-	AI-2E family transporter	NA	NA	NA	NA	NA
AUT69147.1|2888747_2889332_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69148.1|2889410_2889980_-	hypothetical protein	NA	NA	NA	NA	NA
AUT70288.1|2890079_2890430_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69149.1|2891546_2892020_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69150.1|2893315_2894602_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69151.1|2894598_2895852_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69152.1|2895838_2896993_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69153.1|2897341_2897824_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69154.1|2897930_2898356_-	hypothetical protein	NA	NA	NA	NA	NA
AUT70289.1|2899473_2900451_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUT69155.1|2900487_2900802_+	hypothetical protein	NA	A0A0N7C1Z2	Escherichia_phage	52.6	1.2e-07
AUT69156.1|2900798_2901599_+	hypothetical protein	NA	Q8W6R2	Burkholderia_virus	41.5	3.2e-39
AUT69157.1|2903547_2903730_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69158.1|2903852_2904314_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AUT69159.1|2904523_2904793_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69160.1|2904822_2905128_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69161.1|2908415_2908721_-	panthothenate synthetase	NA	NA	NA	NA	NA
AUT69162.1|2909021_2912048_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69163.1|2912380_2912743_-	transcriptional regulator	NA	NA	NA	NA	NA
AUT69164.1|2912828_2913155_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
AUT69165.1|2913154_2913934_+	short-chain dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.2	1.2e-11
AUT69166.1|2914410_2915493_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AUT69167.1|2915505_2915805_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69168.1|2916051_2917473_-	DUF2252 domain-containing protein	NA	NA	NA	NA	NA
AUT69169.1|2917707_2919450_-	SulP family inorganic anion transporter	NA	NA	NA	NA	NA
AUT69170.1|2920030_2920792_-	DUF4239 domain-containing protein	NA	NA	NA	NA	NA
AUT69171.1|2920830_2921130_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69172.1|2921313_2921523_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69173.1|2921742_2922411_-	toluene tolerance protein	NA	NA	NA	NA	NA
AUT69174.1|2922577_2922868_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69175.1|2923576_2925547_+	SMP-30/gluconolaconase/LRE-like region family protein	NA	NA	NA	NA	NA
AUT69176.1|2925985_2927956_+	phosphoesterase	NA	NA	NA	NA	NA
AUT70290.1|2928516_2928825_-	addiction module antidote protein, HigA family	NA	M9MUN2	Rhodococcus_phage	46.2	5.7e-13
AUT69177.1|2928837_2929125_-	excinuclease ABC subunit A	NA	NA	NA	NA	NA
AUT69178.1|2929166_2929739_+	DUF1376 domain-containing protein	NA	NA	NA	NA	NA
AUT69179.1|2929702_2930302_-	NADP oxidoreductase coenzyme	NA	NA	NA	NA	NA
AUT70291.1|2930404_2931139_-	KR domain-containing protein	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.7	4.2e-22
AUT69180.1|2931269_2931845_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AUT69181.1|2936284_2938507_+	OsmC domain/YcaO domain-containing protein	NA	NA	NA	NA	NA
AUT69182.1|2938798_2940478_-	ABC transporter	NA	A0A2K9L3Z8	Tupanvirus	30.9	3.1e-60
AUT70292.1|2940697_2943724_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69183.1|2944160_2945618_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AUT69184.1|2945768_2946554_-	hypothetical protein	NA	NA	NA	NA	NA
AUT70293.1|2947487_2947793_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69185.1|2948647_2949085_-	hypothetical protein	NA	NA	NA	NA	NA
AUT70294.1|2949315_2950494_+	TIGR03118 family protein	NA	A0A2K9L290	Tupanvirus	32.7	4.5e-34
AUT69186.1|2951392_2952205_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP026105	Paraburkholderia hospita strain DSM 17164 chromosome 1, complete sequence	4021292	2955336	3005916	4021292	transposase	Stx2-converting_phage(12.5%)	35	NA	NA
AUT69189.1|2955336_2956917_-|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	28.9	5.5e-43
AUT69190.1|2956948_2957269_-	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	39.0	1.8e-14
AUT69191.1|2957652_2959185_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	46.0	4.4e-122
AUT69192.1|2959580_2960033_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUT69193.1|2962615_2963047_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69194.1|2963037_2963298_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69195.1|2963303_2963519_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69196.1|2963944_2964988_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUT69197.1|2965260_2966280_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69198.1|2967511_2968060_-|transposase	transposase	transposase	NA	NA	NA	NA
AUT69199.1|2968056_2968518_-|transposase	transposase	transposase	NA	NA	NA	NA
AUT69200.1|2968965_2969142_-	sensor histidine kinase	NA	NA	NA	NA	NA
AUT69201.1|2969876_2971199_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	50.6	2.0e-59
AUT69202.1|2972048_2972438_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69203.1|2973505_2974900_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.3	4.2e-55
AUT69204.1|2977258_2978356_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69205.1|2978419_2978875_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69206.1|2978932_2979739_+	hypothetical protein	NA	NA	NA	NA	NA
AUT70295.1|2982070_2983333_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69207.1|2983329_2984169_+	glycosyl transferase	NA	NA	NA	NA	NA
AUT69208.1|2984199_2985372_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AUT69209.1|2985383_2986406_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	47.5	9.8e-86
AUT69210.1|2986729_2987149_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69211.1|2987730_2988138_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69212.1|2990289_2990538_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69213.1|2991767_2992190_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69214.1|2992188_2993436_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	21.6	7.4e-11
AUT69215.1|2993921_2995130_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69216.1|2997718_2998621_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69217.1|2999081_3000263_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AUT69218.1|3000377_3001610_+	transferase	NA	NA	NA	NA	NA
AUT69219.1|3002424_3003561_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUT69220.1|3003654_3003846_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69221.1|3003842_3004196_-	hypothetical protein	NA	NA	NA	NA	NA
AUT70296.1|3004741_3005916_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.9	8.6e-110
>prophage 4
CP026105	Paraburkholderia hospita strain DSM 17164 chromosome 1, complete sequence	4021292	3084449	3136397	4021292	integrase,transposase	Thermobifida_phage(25.0%)	41	3090003:3090021	3127924:3127942
AUT69284.1|3084449_3085583_+|transposase	transposase	transposase	A0A0R8V9X2	Thermobifida_phage	55.9	3.5e-108
AUT69285.1|3085637_3086213_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
AUT69286.1|3086459_3087872_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69287.1|3088243_3088414_-	rubredoxin	NA	NA	NA	NA	NA
AUT69288.1|3088676_3089537_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AUT70303.1|3089901_3090501_+	adenylyl-sulfate kinase	NA	NA	NA	NA	NA
3090003:3090021	attL	CGGCGCCGGCAAATCGACG	NA	NA	NA	NA
AUT69289.1|3090634_3092275_-	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	61.5	3.5e-170
AUT69290.1|3092318_3092609_-	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	39.4	7.2e-18
AUT69291.1|3093169_3093472_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69292.1|3093512_3093962_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69293.1|3094691_3095510_-	phosphopantetheinyl transferase	NA	NA	NA	NA	NA
AUT69294.1|3097111_3098173_-|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	37.9	3.8e-40
AUT69295.1|3098162_3098351_-	excisionase	NA	NA	NA	NA	NA
AUT69296.1|3098461_3098788_+	hypothetical protein	NA	NA	NA	NA	NA
AUT70304.1|3099477_3099717_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69297.1|3100229_3101597_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA	NA
AUT69298.1|3102209_3103025_-|transposase	transposase	transposase	A0A1B1P8D0	Bacillus_phage	31.0	9.5e-07
AUT69299.1|3103021_3104521_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
AUT69300.1|3106095_3107475_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AUT69301.1|3107495_3107807_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69302.1|3108066_3108330_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69303.1|3108769_3108973_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69304.1|3109567_3110539_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69305.1|3110653_3113812_-	acetoacetate--CoA ligase	NA	NA	NA	NA	NA
AUT69306.1|3114251_3114557_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69307.1|3114559_3115729_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUT69308.1|3115844_3116042_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69309.1|3117034_3117298_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69310.1|3118152_3118377_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69311.1|3119720_3121376_+	hypothetical protein	NA	NA	NA	NA	NA
AUT69312.1|3122135_3122345_-	hypothetical protein	NA	NA	NA	NA	NA
AUT69313.1|3122633_3124031_-	NarK/NasA family nitrate transporter	NA	NA	NA	NA	NA
AUT70305.1|3124086_3124836_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
AUT69314.1|3125290_3126487_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AUT69315.1|3126483_3128061_-	D-xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	2.8e-15
3127924:3127942	attR	CGTCGATTTGCCGGCGCCG	NA	NA	NA	NA
AUT69316.1|3128135_3129164_-	D-xylose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUT69317.1|3129376_3130702_-	xylose isomerase	NA	NA	NA	NA	NA
AUT69318.1|3131183_3132143_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	35.7	3.2e-30
AUT69319.1|3132926_3134129_+	XylR family transcriptional regulator	NA	NA	NA	NA	NA
AUT69320.1|3134160_3135252_+	galactose mutarotase	NA	NA	NA	NA	NA
AUT69321.1|3135365_3136397_-|transposase	transposase	transposase	A0A0R8V9X2	Thermobifida_phage	29.7	6.1e-27
>prophage 5
CP026105	Paraburkholderia hospita strain DSM 17164 chromosome 1, complete sequence	4021292	3302386	3317077	4021292	transposase	Pandoravirus(22.22%)	12	NA	NA
AUT69436.1|3302386_3303454_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	46.5	6.2e-75
AUT69437.1|3303551_3304628_+	AI-2E family transporter	NA	NA	NA	NA	NA
AUT69438.1|3304671_3305454_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AUT69439.1|3305446_3306133_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AUT69440.1|3306129_3307752_+	polynucleotide adenylyltransferase PcnB	NA	A0A172Q0J1	Acinetobacter_phage	30.8	2.6e-16
AUT69441.1|3307800_3308364_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	40.1	2.5e-14
AUT69442.1|3308360_3309056_+	deoxynucleoside kinase	NA	A0A0C5K8U0	Enterococcus_phage	28.0	1.8e-06
AUT69443.1|3309098_3309914_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	30.6	7.4e-36
AUT69444.1|3310333_3311719_-|transposase	transposase	transposase	A0A1S5RG13	Helicobacter_phage	21.1	4.4e-12
AUT69445.1|3311831_3313712_-	chloride transporter	NA	S4VNU7	Pandoravirus	33.6	1.0e-51
AUT69446.1|3313736_3314870_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	38.6	7.4e-26
AUT69447.1|3315124_3317077_-	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	48.7	2.9e-147
>prophage 1
CP026107	Paraburkholderia hospita strain DSM 17164 chromosome 3, complete sequence	2439752	1282943	1352587	2439752	transposase,protease,plate	Lake_Baikal_phage(25.0%)	58	NA	NA
AUT74264.1|1282943_1283456_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AUT74265.1|1283460_1285338_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AUT74266.1|1285322_1286402_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AUT74267.1|1286406_1289106_+	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	31.6	1.6e-82
AUT74268.1|1289149_1289539_+	DUF4280 domain-containing protein	NA	NA	NA	NA	NA
AUT74269.1|1289540_1291529_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.0	1.5e-37
AUT74270.1|1291565_1293344_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AUT74271.1|1293388_1294723_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AUT74272.1|1294746_1296033_+	type VI secretion system protein TssL	NA	NA	NA	NA	NA
AUT74273.1|1296076_1299604_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AUT74274.1|1299600_1300326_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AUT74275.1|1300383_1300974_+	OmpA family protein	NA	NA	NA	NA	NA
AUT75313.1|1300998_1301916_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74276.1|1301957_1302764_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AUT75314.1|1302921_1303692_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUT75315.1|1303773_1304430_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUT74277.1|1304426_1305185_+	amino acid ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.7	4.2e-17
AUT74278.1|1305187_1306483_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AUT74279.1|1307484_1308183_+	two pore domain potassium channel family protein	NA	NA	NA	NA	NA
AUT74280.1|1310813_1311905_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUT74281.1|1312157_1313015_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AUT74282.1|1313185_1313404_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74283.1|1313617_1314577_-	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	25.6	5.3e-09
AUT74284.1|1315040_1315367_-	histone family protein nucleoid-structuring protein H-NS	NA	NA	NA	NA	NA
AUT74285.1|1316697_1316901_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	73.1	6.3e-21
AUT74286.1|1317299_1317929_-	TerB family tellurite resistance protein	NA	NA	NA	NA	NA
AUT75316.1|1318491_1319061_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74287.1|1319423_1320086_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74288.1|1320240_1320522_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74289.1|1320961_1321945_-|protease	serine protease	protease	NA	NA	NA	NA
AUT74290.1|1321985_1322858_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74291.1|1322857_1324411_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74292.1|1324492_1326175_-	cell envelope biogenesis protein OmpA	NA	NA	NA	NA	NA
AUT74293.1|1327396_1327600_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	71.6	2.4e-20
AUT75317.1|1327742_1328462_-	DUF1223 domain-containing protein	NA	NA	NA	NA	NA
AUT74294.1|1328516_1329362_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AUT74295.1|1330331_1330631_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74296.1|1330879_1331164_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74297.1|1331783_1332191_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74298.1|1332840_1334217_+	hypothetical protein	NA	Q9JMP3	Wolbachia_phage	38.8	2.7e-86
AUT74299.1|1334802_1337559_-	UPF0182 family protein	NA	NA	NA	NA	NA
AUT74300.1|1337854_1338439_-	carbonic anhydrase	NA	NA	NA	NA	NA
AUT74301.1|1338540_1339368_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74302.1|1339364_1339970_-	DUF1326 domain-containing protein	NA	NA	NA	NA	NA
AUT74303.1|1340142_1341123_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AUT74304.1|1341647_1341950_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74305.1|1342135_1342387_+	plasmid stabilization protein	NA	NA	NA	NA	NA
AUT74306.1|1342623_1343724_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75318.1|1344498_1344969_+	universal stress protein	NA	NA	NA	NA	NA
AUT74307.1|1345239_1346052_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74308.1|1346509_1346821_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AUT74309.1|1347168_1347360_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75319.1|1347603_1348032_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74310.1|1348567_1349038_-	hypothetical protein	NA	NA	NA	NA	NA
AUT74311.1|1349403_1349667_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74312.1|1349721_1349946_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74313.1|1350258_1350477_+	hypothetical protein	NA	NA	NA	NA	NA
AUT74314.1|1351048_1352587_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	36.7	1.2e-47
>prophage 1
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	95588	166760	971216	integrase,transposase	Acidithiobacillus_phage(16.67%)	53	92713:92728	148827:148842
92713:92728	attL	GCGCGATGGTGAGCGG	NA	NA	NA	NA
AUT75518.1|95588_96506_-|integrase	integrase	integrase	NA	NA	NA	NA
AUT75519.1|96793_97480_+	hypothetical protein	NA	C7BGE4	Burkholderia_phage	48.3	1.3e-52
AUT75520.1|97461_97854_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75521.1|98123_98339_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75522.1|98417_99236_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76110.1|99237_100134_-	Ku protein	NA	NA	NA	NA	NA
AUT75523.1|99885_102177_+	DNA ligase D	NA	A0A291AUV6	Sinorhizobium_phage	39.9	6.5e-53
AUT75524.1|102651_102861_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75525.1|103033_104542_-	carnitine dehydratase	NA	NA	NA	NA	NA
AUT75526.1|104632_105586_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AUT75527.1|105607_106522_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AUT75528.1|107250_107721_+	N-acetyltransferase	NA	NA	NA	NA	NA
AUT75529.1|108971_109892_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUT76111.1|110968_111307_-	hypothetical protein	NA	B6DZU5	Stx2-converting_phage	45.8	1.4e-09
AUT75530.1|111659_114182_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75531.1|114722_115904_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75532.1|118207_119251_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75533.1|119678_119921_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75534.1|120030_121290_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75535.1|121279_121900_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75536.1|121960_122548_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75537.1|122576_123149_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75538.1|123221_130088_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75539.1|130422_131010_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75540.1|131131_132341_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	65.1	6.1e-103
AUT75541.1|133288_134314_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.2	8.5e-37
AUT75542.1|134976_135324_-	NIPSNAP family protein	NA	NA	NA	NA	NA
AUT75543.1|136013_136232_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75544.1|136231_137017_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	38.9	9.4e-36
AUT76112.1|136997_138506_-|integrase	integrase	integrase	U5N3F9	Enterobacteria_phage	29.0	1.7e-30
AUT75545.1|138738_138954_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75546.1|140540_141389_-	2-deoxy-D-gluconate 3-dehydrogenase	NA	NA	NA	NA	NA
AUT75547.1|141512_142445_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUT75548.1|142471_145261_-	oxidoreductase	NA	NA	NA	NA	NA
AUT75549.1|145977_146340_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75550.1|146860_147559_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	43.3	1.5e-37
AUT75551.1|147825_149283_+	hypothetical protein	NA	NA	NA	NA	NA
148827:148842	attR	GCGCGATGGTGAGCGG	NA	NA	NA	NA
AUT75552.1|149158_149791_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75553.1|150014_150344_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75554.1|151120_151300_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76113.1|151613_151895_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75555.1|152207_152969_-	phospholipid phosphatase	NA	NA	NA	NA	NA
AUT75556.1|152965_154174_-	MFS transporter	NA	NA	NA	NA	NA
AUT75557.1|157394_159626_-	copper-transporting ATPase	NA	A0A218MNH6	uncultured_virus	30.3	3.6e-56
AUT75558.1|159646_160303_-	isoprenylcysteine carboxyl methyltransferase	NA	NA	NA	NA	NA
AUT75559.1|160286_160541_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76114.1|160566_160983_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75560.1|161363_162020_+	hypothetical protein	NA	A0A0C5K8T5	Enterococcus_phage	25.1	7.6e-07
AUT75561.1|162016_162865_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75562.1|162867_163365_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75563.1|164092_164380_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75564.1|164435_165194_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	51.7	2.7e-64
AUT75565.1|165212_166760_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.9	1.1e-128
>prophage 2
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	182267	233457	971216	integrase,transposase	Bacillus_phage(28.57%)	36	220251:220265	234000:234014
AUT75584.1|182267_183167_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AUT75585.1|183163_183550_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AUT76118.1|183708_183990_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75586.1|184453_184828_+	cupin	NA	NA	NA	NA	NA
AUT75587.1|185642_186383_+	beta-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	38.7	3.3e-06
AUT75588.1|187338_187866_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75589.1|188255_188684_+	glyoxalase	NA	NA	NA	NA	NA
AUT75590.1|188856_189198_-	histone family protein nucleoid-structuring protein H-NS	NA	NA	NA	NA	NA
AUT75591.1|189370_190357_+	histidine biosynthesis protein HisIE	NA	NA	NA	NA	NA
AUT75592.1|190426_190651_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75593.1|190719_191025_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75594.1|191176_191479_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75595.1|193328_193799_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75596.1|194353_194545_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75597.1|195600_196395_+	DNA-binding response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	32.0	3.9e-05
AUT75598.1|197694_200043_+	hybrid sensor histidine kinase/response regulator	NA	B5LWN8	Feldmannia_species_virus	27.7	2.2e-08
AUT75599.1|200366_200582_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75600.1|200666_201080_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75601.1|201347_201656_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75602.1|201750_202017_+	CsbD family protein	NA	NA	NA	NA	NA
AUT75603.1|202071_202446_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75604.1|205298_206015_-	DDE domain-containing protein	NA	A0A077SL39	Escherichia_phage	43.8	1.5e-40
AUT75605.1|207268_207541_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75606.1|208049_210746_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75607.1|212177_215342_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75608.1|215316_220770_+	hypothetical protein	NA	NA	NA	NA	NA
220251:220265	attL	CGCGCTCGCGCGCTT	NA	NA	NA	NA
AUT75609.1|220785_222756_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75610.1|223064_224066_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75611.1|224620_225274_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75612.1|225641_226115_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75613.1|226767_227634_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75614.1|228130_228898_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	54.2	8.7e-71
AUT75615.1|229552_230557_-|integrase	integrase	integrase	A0A2P1A0S4	Gordonia_phage	27.7	3.1e-15
AUT75616.1|230553_231495_-|integrase	integrase	integrase	NA	NA	NA	NA
AUT75617.1|231491_232742_-|integrase	integrase	integrase	A0A1B1P7C7	Bacillus_phage	30.1	1.8e-09
AUT75618.1|233247_233457_+|transposase	transposase	transposase	NA	NA	NA	NA
234000:234014	attR	CGCGCTCGCGCGCTT	NA	NA	NA	NA
>prophage 3
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	310416	362852	971216	integrase,transposase	uncultured_Caudovirales_phage(16.67%)	41	313335:313349	370061:370075
AUT76125.1|310416_311139_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	44.7	4.0e-41
AUT75670.1|312317_313232_-	AraC family transcriptional regulator	NA	A0A291LAM3	Bordetella_phage	28.1	2.5e-08
313335:313349	attL	CTGCGCGGCGTCGGG	NA	NA	NA	NA
AUT76126.1|313566_315324_-	transcriptional regulator	NA	NA	NA	NA	NA
AUT75671.1|315689_316370_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUT75672.1|316397_321389_+	protein kinase	NA	A0A2H4UW49	Bodo_saltans_virus	27.4	1.3e-08
AUT75673.1|321401_324377_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	35.0	1.9e-44
AUT75674.1|324379_325543_+	hybrid sensor histidine kinase/response regulator	NA	W8CYM9	Bacillus_phage	41.2	4.2e-16
AUT75675.1|325577_325916_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75676.1|326517_326961_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AUT76127.1|326980_327814_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
AUT75677.1|327813_329034_-	formyl-CoA transferase	NA	NA	NA	NA	NA
AUT75678.1|329033_329492_-	acyl dehydratase	NA	NA	NA	NA	NA
AUT75679.1|329493_329886_-	glyoxalase	NA	NA	NA	NA	NA
AUT76128.1|329882_330833_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AUT75680.1|330928_331834_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUT76129.1|332132_333563_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AUT75681.1|334213_335347_-	two-component sensor histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	42.3	9.9e-71
AUT75682.1|335656_337486_-	hybrid sensor histidine kinase/response regulator	NA	Q8QKV7	Ectocarpus_siliculosus_virus	31.3	3.6e-06
AUT75683.1|337757_338210_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75684.1|338512_338716_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	70.1	4.1e-20
AUT75685.1|338903_339134_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75686.1|339210_339786_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75687.1|341097_342414_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75688.1|343227_345312_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AUT75689.1|345301_346198_+	hypothetical protein	NA	A0A2I7SAF7	Vibrio_phage	32.4	1.5e-05
AUT75690.1|346627_347401_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75691.1|347508_348132_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75692.1|348846_349812_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75693.1|350037_350400_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75694.1|350415_350859_-	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA	NA
AUT75695.1|351153_351432_+	DNA-binding protein	NA	B5TA87	Burkholderia_phage	44.4	3.3e-12
AUT75696.1|351676_352021_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75697.1|352031_352298_-	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
AUT75698.1|352513_352843_-	plasmid stabilization protein	NA	NA	NA	NA	NA
AUT76130.1|352839_353076_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
AUT75699.1|353286_354591_-|integrase	integrase	integrase	NA	NA	NA	NA
AUT75700.1|354800_355925_+	ATPase	NA	NA	NA	NA	NA
AUT75701.1|357281_357644_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75702.1|357640_359530_-|integrase	integrase	integrase	NA	NA	NA	NA
AUT75703.1|359526_361407_-|integrase	integrase	integrase	A0A2H4J9J6	uncultured_Caudovirales_phage	28.5	1.3e-22
AUT76131.1|361403_362852_-|integrase	site-specific integrase	integrase	A0A2H4J165	uncultured_Caudovirales_phage	29.2	1.8e-37
370061:370075	attR	CTGCGCGGCGTCGGG	NA	NA	NA	NA
>prophage 4
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	458648	521876	971216	integrase,transposase	Bacillus_phage(30.0%)	57	476731:476745	524890:524904
AUT75762.1|458648_459986_-|transposase	IS4 family transposase	transposase	Q9JMP3	Wolbachia_phage	33.1	5.6e-65
AUT75763.1|461944_462307_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75764.1|462316_463243_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76137.1|463392_463581_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75765.1|463934_464828_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76138.1|464837_465836_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75766.1|466175_467438_-	glucosyltransferase	NA	NA	NA	NA	NA
AUT75767.1|467481_468903_-	hopanoid biosynthesis associated radical SAM protein HpnJ	NA	NA	NA	NA	NA
AUT76139.1|472557_473073_+	DUF2127 domain-containing protein	NA	NA	NA	NA	NA
AUT75768.1|473135_473699_-	cytochrome B	NA	NA	NA	NA	NA
AUT75769.1|473734_474109_-	cytochrome B562	NA	NA	NA	NA	NA
AUT75770.1|474276_474939_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.0	9.3e-29
AUT75771.1|474938_476285_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	25.0	5.6e-12
AUT75772.1|476494_476743_-	hypothetical protein	NA	NA	NA	NA	NA
476731:476745	attL	CCAACCGTTCCATCA	NA	NA	NA	NA
AUT75773.1|477131_478190_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AUT75774.1|478268_479177_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUT76140.1|479413_480991_+	alpha-galactosidase	NA	A0A2P0VP48	Tetraselmis_virus	30.6	8.4e-36
AUT75775.1|481805_482858_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75776.1|483730_484792_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75777.1|484839_485565_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76141.1|485803_485911_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75778.1|486293_487769_+|integrase	integrase	integrase	NA	NA	NA	NA
AUT75779.1|488087_490427_-	hypothetical protein	NA	A0A127AWB9	Bacillus_phage	36.8	9.6e-20
AUT75780.1|490761_490998_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75781.1|492466_492676_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75782.1|493137_493914_-	Asp/Glu racemase	NA	NA	NA	NA	NA
AUT75783.1|493910_495155_-	amino acid dehydrogenase	NA	NA	NA	NA	NA
AUT75784.1|495414_496608_+	branched chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUT75785.1|496633_497533_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUT75786.1|497536_499351_+	ABC transporter	NA	A0A2H4PQG7	Staphylococcus_phage	22.7	2.4e-10
AUT75787.1|499338_500076_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.9	1.1e-17
AUT75788.1|500140_500347_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75789.1|501052_501466_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75790.1|501504_501996_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75791.1|502115_503300_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75792.1|503666_504101_+	DUF29 domain-containing protein	NA	A0JC30	Ralstonia_phage	51.7	5.2e-36
AUT75793.1|504413_504638_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75794.1|505426_506539_+	poly-gamma-glutamate biosynthesis protein	NA	S4VS02	Pandoravirus	56.2	2.1e-110
AUT75795.1|506535_507165_-	hydrolase	NA	NA	NA	NA	NA
AUT75796.1|507273_507597_-	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
AUT76142.1|508732_509194_+	CHRD domain-containing protein	NA	NA	NA	NA	NA
AUT75797.1|509238_509931_-	hydrogenase	NA	NA	NA	NA	NA
AUT75798.1|510268_510607_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75799.1|510871_512659_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AUT75800.1|512834_513089_+	antitoxin of toxin-antitoxin stability system	NA	NA	NA	NA	NA
AUT75801.1|513076_513499_+	PIN domain-containing protein	NA	NA	NA	NA	NA
AUT75802.1|513813_514086_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75803.1|514235_514565_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75804.1|516222_516546_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75805.1|516545_516998_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75806.1|517122_518046_-|integrase	integrase	integrase	NA	NA	NA	NA
AUT75807.1|518564_519224_+|integrase	integrase	integrase	NA	NA	NA	NA
AUT75808.1|519331_519580_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AUT75809.1|519573_519894_+	growth inhibitor PemK	NA	NA	NA	NA	NA
AUT75810.1|520145_520514_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75811.1|520549_520777_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75812.1|520850_521876_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	32.9	5.5e-36
524890:524904	attR	TGATGGAACGGTTGG	NA	NA	NA	NA
>prophage 5
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	529275	571891	971216	integrase,transposase	Gordonia_phage(25.0%)	38	525410:525424	533992:534006
525410:525424	attL	GCGTGCTCGCCAACC	NA	NA	NA	NA
AUT75816.1|529275_530526_+|integrase	integrase	integrase	A0A1B1P7C7	Bacillus_phage	29.5	9.1e-09
AUT75817.1|530522_531464_+|integrase	integrase	integrase	NA	NA	NA	NA
AUT75818.1|531460_532465_+|integrase	integrase	integrase	A0A2P1A0S4	Gordonia_phage	27.7	3.1e-15
AUT75819.1|532915_533125_+|transposase	transposase	transposase	NA	NA	NA	NA
AUT75820.1|533313_533766_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75821.1|533816_534047_+	hypothetical protein	NA	NA	NA	NA	NA
533992:534006	attR	GCGTGCTCGCCAACC	NA	NA	NA	NA
AUT75822.1|534828_536166_-|transposase	IS4 family transposase	transposase	Q9JMP3	Wolbachia_phage	33.1	5.6e-65
AUT76144.1|538969_539989_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUT75823.1|540280_540772_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUT75824.1|540711_541125_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUT75825.1|541215_542856_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	31.6	4.9e-63
AUT75826.1|542978_543299_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75827.1|544501_544942_+	ester cyclase	NA	NA	NA	NA	NA
AUT75828.1|545192_546230_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
AUT75829.1|546703_548167_-|transposase	transposase	transposase	NA	NA	NA	NA
AUT76145.1|548383_548626_+	post-segregation antitoxin CcdA	NA	NA	NA	NA	NA
AUT75830.1|548625_548943_+	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
AUT75831.1|549360_550368_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75832.1|550386_553065_-	ATP-dependent helicase	NA	A0A1B3B0M9	Gordonia_phage	29.0	3.2e-35
AUT75833.1|553309_554329_-	YecA family protein	NA	NA	NA	NA	NA
AUT76146.1|555187_555940_-	hypothetical protein	NA	C7BGE4	Burkholderia_phage	47.9	7.5e-51
AUT75834.1|556973_557225_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75835.1|557477_557948_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
AUT75836.1|559510_560071_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AUT75837.1|560333_560531_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75838.1|561029_561320_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76147.1|561844_563374_-	inorganic triphosphatase	NA	NA	NA	NA	NA
AUT75839.1|563887_564361_+	photosystem reaction center subunit H	NA	NA	NA	NA	NA
AUT75840.1|564733_564958_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76148.1|564939_565533_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AUT75841.1|566744_566963_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75842.1|567207_567429_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76149.1|567843_568233_-	photosystem reaction center subunit H	NA	NA	NA	NA	NA
AUT75843.1|568517_568706_+	CsbD family protein	NA	NA	NA	NA	NA
AUT75844.1|568771_569836_+	glycosyl transferase	NA	A0A1D8KU90	Synechococcus_phage	28.0	3.7e-11
AUT75845.1|569905_570283_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75846.1|570370_570754_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76150.1|571225_571891_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	46.2	1.8e-43
>prophage 6
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	616897	679935	971216	integrase,transposase	Leptospira_phage(21.43%)	46	618047:618063	679711:679727
AUT76157.1|616897_618250_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	32.6	3.7e-40
618047:618063	attL	CCGCACAGTCCATGGCA	NA	NA	NA	NA
AUT75868.1|619319_620855_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75869.1|620955_621288_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75870.1|622067_622340_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75871.1|622459_624703_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75872.1|624734_626012_-	PA-phosphatase	NA	NA	NA	NA	NA
AUT75873.1|626059_627844_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76158.1|628175_629222_-	cyclic nucleotide-binding protein	NA	NA	NA	NA	NA
AUT75874.1|630752_632312_-	signaling protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	24.5	5.4e-11
AUT75875.1|633557_634991_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	26.7	6.1e-17
AUT76159.1|635692_635974_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76160.1|637076_637406_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75876.1|637515_637893_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76161.1|638467_639427_+	poly(3-hydroxybutyrate) depolymerase	NA	NA	NA	NA	NA
AUT75877.1|640899_642606_-	tannase/feruloyl esterase family alpha/beta hydrolase	NA	NA	NA	NA	NA
AUT75878.1|642616_643759_-	porin	NA	NA	NA	NA	NA
AUT75879.1|643802_645011_-	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA	NA
AUT75880.1|645049_645451_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75881.1|645483_646320_+	p-hydroxycinnamoyl CoA hydratase/lyase	NA	NA	NA	NA	NA
AUT75882.1|646383_647835_+	salicylaldehyde dehydrogenase	NA	NA	NA	NA	NA
AUT75883.1|648007_649900_+	feruloyl-CoA synthase	NA	NA	NA	NA	NA
AUT76162.1|649975_650491_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUT75884.1|651193_652399_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
AUT75885.1|652407_653286_-|integrase	integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	26.8	4.6e-23
AUT75886.1|653592_654561_+|integrase	integrase	integrase	A0A1L4BKH1	Thermus_phage	30.4	2.7e-08
AUT75887.1|654557_655499_+|integrase	integrase	integrase	S5W9T9	Leptospira_phage	25.7	1.3e-07
AUT75888.1|655495_656500_+|integrase	integrase	integrase	S5W9T9	Leptospira_phage	27.6	9.5e-09
AUT75889.1|656607_656823_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76163.1|656935_657964_-|integrase	integrase	integrase	A0A2D2W4Z2	Ralstonia_phage	24.6	1.7e-08
AUT75890.1|657963_658938_-|integrase	integrase	integrase	NA	NA	NA	NA
AUT75891.1|658934_660158_-|integrase	integrase	integrase	S5W9T9	Leptospira_phage	29.4	1.2e-10
AUT75892.1|663771_664083_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75893.1|664209_664794_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75894.1|664981_665182_+	hypothetical protein	NA	NA	NA	NA	NA
AUT75895.1|665264_665615_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75896.1|666343_666643_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75897.1|666655_667738_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AUT75898.1|667996_669952_+	hypothetical protein	NA	Q8QNA2	Ectocarpus_siliculosus_virus	26.5	9.2e-08
AUT75899.1|670096_672043_+	hypothetical protein	NA	Q8QNA2	Ectocarpus_siliculosus_virus	27.9	8.3e-09
AUT75900.1|672081_672786_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75901.1|672801_673377_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75902.1|675247_676495_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	32.5	1.6e-45
AUT75903.1|676491_677358_+	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	45.9	3.0e-51
AUT75904.1|677493_678054_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AUT75905.1|678306_678504_-	hypothetical protein	NA	NA	NA	NA	NA
AUT75906.1|678909_679935_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.2	8.5e-37
679711:679727	attR	CCGCACAGTCCATGGCA	NA	NA	NA	NA
>prophage 7
CP026108	Paraburkholderia hospita strain DSM 17164 chromosome 4, complete sequence	971216	895645	954434	971216	integrase,tRNA,transposase	uncultured_Caudovirales_phage(50.0%)	51	950884:950901	955893:955910
AUT76049.1|895645_896656_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AUT76184.1|896786_897212_-	universal stress protein	NA	NA	NA	NA	NA
AUT76050.1|898273_898651_+	hypothetical protein	NA	G3ENA3	Psychrobacter_phage	61.1	7.7e-12
AUT76051.1|898993_899398_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76052.1|899489_899732_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76053.1|900418_901231_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AUT76054.1|901473_901914_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76055.1|901923_903354_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76056.1|903678_904146_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76057.1|905054_905318_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76058.1|905375_905588_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76059.1|905974_907804_+	ATP-dependent helicase	NA	NA	NA	NA	NA
AUT76060.1|908170_909103_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
AUT76061.1|909665_910661_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76185.1|911486_912614_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.0	3.6e-12
AUT76062.1|913365_913764_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76063.1|913797_914574_-	1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase	NA	W8CYX9	Bacillus_phage	38.8	2.2e-05
AUT76064.1|915632_916121_-	benzoate 1,2-dioxygenase small subunit	NA	NA	NA	NA	NA
AUT76065.1|916117_917461_-	benzoate 1,2-dioxygenase large subunit	NA	NA	NA	NA	NA
AUT76066.1|917588_918524_-	catechol 1,2-dioxygenase	NA	NA	NA	NA	NA
AUT76067.1|918698_919628_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	25.3	7.7e-13
AUT76068.1|919612_919891_+	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AUT76069.1|919908_921111_+	benzoate transporter	NA	NA	NA	NA	NA
AUT76070.1|921539_922076_+	alkyl hydroperoxide reductase	NA	NA	NA	NA	NA
AUT76071.1|922334_922685_-	RND transporter MFP subunit	NA	NA	NA	NA	NA
AUT76072.1|924554_924980_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76073.1|924957_925233_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76074.1|925275_925539_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76075.1|926255_926711_+	DNA-binding protein	NA	NA	NA	NA	NA
AUT76186.1|927048_927333_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76187.1|927567_928509_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
AUT76188.1|929166_929811_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUT76076.1|930689_931241_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76077.1|932432_932744_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76078.1|932797_933034_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76079.1|933104_934091_-	histidine biosynthesis protein HisIE	NA	NA	NA	NA	NA
AUT76080.1|934965_935832_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76081.1|935985_938493_+	DNA ligase D	NA	A0A068CDF3	Rhizobium_phage	37.6	6.6e-51
AUT76082.1|938741_938933_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76083.1|939085_939286_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76084.1|939415_939739_-	histone family protein nucleoid-structuring protein H-NS	NA	NA	NA	NA	NA
AUT76085.1|941628_942702_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76086.1|942637_943000_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76087.1|942996_944880_-|integrase	integrase	integrase	A0A2H4J185	uncultured_Caudovirales_phage	26.6	1.2e-36
AUT76088.1|944876_946757_-|integrase	integrase	integrase	A0A2H4J9J6	uncultured_Caudovirales_phage	25.9	3.5e-20
AUT76190.1|946753_948202_-|integrase	site-specific integrase	integrase	A0A2H4J165	uncultured_Caudovirales_phage	29.5	8.3e-38
AUT76189.1|948448_949435_+|integrase	integrase catalytic subunit	integrase	NA	NA	NA	NA
AUT76089.1|949459_950437_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76090.1|950528_951044_+	hypothetical protein	NA	NA	NA	NA	NA
950884:950901	attL	AGACGCCGTTCATCGTCA	NA	NA	NA	NA
AUT76091.1|951801_952437_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76092.1|952433_954434_+|integrase	integrase	integrase	NA	NA	NA	NA
955893:955910	attR	AGACGCCGTTCATCGTCA	NA	NA	NA	NA
>prophage 1
CP026109	Paraburkholderia hospita strain DSM 17164 chromosome 5, complete sequence	725510	467530	531196	725510	transposase,protease,integrase	Mycobacterium_phage(12.5%)	56	463355:463370	515157:515172
463355:463370	attL	CGCGAACACCTTATGC	NA	NA	NA	NA
AUT76774.1|467530_468301_+|protease	serine protease	protease	NA	NA	NA	NA
AUT76775.1|469359_469656_+|integrase	integrase	integrase	NA	NA	NA	NA
AUT76776.1|469859_470495_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA	NA
AUT76536.1|470511_470700_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76537.1|472477_472861_+	conjugal transfer protein TraR	NA	NA	NA	NA	NA
AUT76538.1|473092_473776_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	31.6	1.3e-14
AUT76539.1|473747_475178_+|transposase	ISKra4 family transposase	transposase	NA	NA	NA	NA
AUT76540.1|476047_476839_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AUT76541.1|477461_477863_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
AUT76542.1|478270_478798_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76543.1|479044_479326_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
AUT76544.1|479349_479613_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76545.1|479889_480123_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76546.1|480158_480734_+	phasin	NA	NA	NA	NA	NA
AUT76547.1|481002_481206_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	70.1	5.4e-20
AUT76777.1|481295_483548_-	catalase/peroxidase HPI	NA	NA	NA	NA	NA
AUT76548.1|484028_484295_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76549.1|484797_485313_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76550.1|485819_486023_-	HU family DNA-binding protein	NA	Q6QIE5	Burkholderia_phage	54.0	1.7e-10
AUT76551.1|486781_487123_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76552.1|487339_487867_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76553.1|487966_488110_-	DUF2905 domain-containing protein	NA	NA	NA	NA	NA
AUT76554.1|488137_488686_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76778.1|489209_489446_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76555.1|489742_490135_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76556.1|490124_490844_-	YecA family protein	NA	NA	NA	NA	NA
AUT76557.1|491339_491984_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUT76558.1|492498_493176_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76559.1|493664_493904_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76779.1|494307_495132_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUT76780.1|495407_496808_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.1	5.8e-20
AUT76560.1|496829_497015_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76561.1|497124_498687_+	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AUT76562.1|499139_499883_-	beta-ketoacyl-ACP reductase	NA	A0A0K0KVL6	Prochlorococcus_phage	29.6	2.1e-08
AUT76563.1|500051_500624_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AUT76564.1|500866_501064_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76565.1|502226_502643_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76566.1|502959_503268_-	acylphosphatase	NA	NA	NA	NA	NA
AUT76567.1|505342_505765_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76568.1|505763_507011_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	32.1	3.5e-45
AUT76781.1|507300_507585_+	DUF2442 domain-containing protein	NA	NA	NA	NA	NA
AUT76569.1|507781_508207_-	response regulator	NA	NA	NA	NA	NA
AUT76570.1|509635_510256_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76571.1|511382_512513_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AUT76572.1|512509_513649_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76573.1|513665_515129_+	DUF4331 domain-containing protein	NA	NA	NA	NA	NA
AUT76574.1|517690_517963_+	hypothetical protein	NA	NA	NA	NA	NA
515157:515172	attR	GCATAAGGTGTTCGCG	NA	NA	NA	NA
AUT76575.1|519134_520982_+	hypothetical protein	NA	NA	NA	NA	NA
AUT76576.1|522621_523795_+|transposase	transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	47.2	1.7e-73
AUT76577.1|523758_524229_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76578.1|524406_525567_-	sialidase	NA	NA	NA	NA	NA
AUT76579.1|525603_525873_-	thiamine biosynthesis protein ThiS	NA	NA	NA	NA	NA
AUT76580.1|526440_526668_-	hypothetical protein	NA	NA	NA	NA	NA
AUT76581.1|526666_527920_+	oxidase	NA	NA	NA	NA	NA
AUT76782.1|527934_528222_+	sulfide dehydrogenase	NA	NA	NA	NA	NA
AUT76783.1|530218_531196_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	31.3	1.4e-17
