The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	915250	924268	6313552	transposase	uncultured_Caudovirales_phage(57.14%)	8	NA	NA
AUY32442.1|915250_915991_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY32443.1|915987_917508_-|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
AUY32444.1|917956_918658_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	78.1	1.4e-102
AUY32445.1|918670_919141_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	66.7	1.7e-53
AUY32446.1|919168_920452_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	74.2	1.6e-173
AUY32447.1|920473_920821_-	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	61.9	1.3e-34
AUY37078.1|921053_922280_+	MFS transporter	NA	NA	NA	NA	NA
AUY32448.1|922417_924268_+	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.1	4.8e-38
>prophage 2
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	1099655	1184844	6313552	terminase,plate,protease,portal,capsid,tail,holin,tRNA,head,integrase,transposase	Pseudomonas_phage(32.26%)	102	1155598:1155615	1187313:1187330
AUY32583.1|1099655_1100684_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY32584.1|1102087_1103116_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY32585.1|1104849_1105878_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY32586.1|1106286_1106562_-	hypothetical protein	NA	M1PSQ0	Streptococcus_phage	43.4	1.5e-12
AUY32587.1|1106769_1107798_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY32588.1|1107786_1108419_-	hypothetical protein	NA	M1PSQ0	Streptococcus_phage	32.3	8.3e-27
AUY32589.1|1108847_1109204_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AUY32590.1|1109184_1109487_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	1.8e-11
AUY32591.1|1109491_1111873_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AUY32592.1|1111904_1112921_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AUY32593.1|1113032_1113389_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AUY32594.1|1113416_1113611_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AUY37085.1|1113674_1114208_-	translation initiation factor IF-3	NA	A0A2I7S9Q1	Vibrio_phage	39.3	1.4e-14
AUY32595.1|1114225_1116148_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.2	7.7e-124
AUY32596.1|1116484_1116787_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32597.1|1116950_1117163_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.2	1.7e-16
AUY32598.1|1117287_1118715_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	25.9	1.3e-27
AUY32599.1|1118678_1119224_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
AUY32600.1|1119440_1120340_+	lipid A hydroxylase LpxO	NA	H8ZJK8	Ostreococcus_tauri_virus	36.8	1.0e-33
AUY32601.1|1120479_1120824_+	alkylhydroperoxidase	NA	NA	NA	NA	NA
AUY32602.1|1120902_1121472_+	N-acetyltransferase	NA	NA	NA	NA	NA
AUY32603.1|1121616_1123446_+	SLC13 family permease	NA	NA	NA	NA	NA
AUY32604.1|1123561_1124980_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	31.3	2.1e-17
AUY32605.1|1124981_1125743_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32606.1|1125844_1126762_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUY32607.1|1126883_1127075_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32608.1|1127685_1128246_+	cysteine hydrolase	NA	NA	NA	NA	NA
AUY32609.1|1128246_1128600_-	ligand-binding protein SH3	NA	NA	NA	NA	NA
AUY37086.1|1128647_1129148_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUY32610.1|1129217_1129922_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AUY32611.1|1130025_1130937_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUY32612.1|1131467_1131677_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32613.1|1132208_1133165_+	nucleoside-specific channel-forming protein Tsx	NA	NA	NA	NA	NA
AUY32614.1|1133262_1134078_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUY32615.1|1134186_1134516_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32616.1|1135066_1135276_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32617.1|1135566_1135755_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	62.7	8.5e-12
AUY37087.1|1135833_1136142_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32618.1|1136278_1136785_-	DUF2514 domain-containing protein	NA	A0A2H4J3Q6	uncultured_Caudovirales_phage	64.6	4.9e-38
AUY32619.1|1136781_1137228_-	structural protein P5	NA	A0A2H4J6R1	uncultured_Caudovirales_phage	48.3	9.4e-25
AUY32620.1|1137371_1138445_+	acyltransferase	NA	A0A0M4REL5	Salmonella_phage	26.9	8.6e-16
AUY32621.1|1138733_1139156_-	structural protein	NA	A0A2R3UAM8	Myoviridae_environmental_samples	74.5	1.1e-54
AUY37088.1|1139197_1139518_-	hypothetical protein	NA	A0A2H4J9Z7	uncultured_Caudovirales_phage	37.3	9.4e-11
AUY32622.1|1139612_1141097_-	hypothetical protein	NA	A0A077K818	Ralstonia_phage	60.3	3.8e-38
AUY32623.1|1141103_1141700_-|tail	phage tail protein	tail	B5TK76	Pseudomonas_phage	57.9	5.0e-58
AUY32624.1|1141690_1142731_-|plate	baseplate J protein	plate	B5TK75	Pseudomonas_phage	56.8	7.9e-99
AUY32625.1|1142720_1143119_-	hypothetical protein	NA	B5TK74	Pseudomonas_phage	53.7	8.6e-30
AUY32626.1|1143115_1143625_-|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	67.9	1.6e-57
AUY32627.1|1143621_1144734_-|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	58.6	1.8e-112
AUY32628.1|1144738_1146088_-	hypothetical protein	NA	B5TK71	Pseudomonas_phage	37.6	1.9e-73
AUY37089.1|1146084_1148289_-|tail	phage tail tape measure protein	tail	A0A192Y6D8	Salmonella_phage	47.6	1.2e-104
AUY32629.1|1148418_1148718_-	ArsR family transcriptional regulator	NA	B5TK69	Pseudomonas_phage	59.8	9.1e-24
AUY32630.1|1148717_1149065_-|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	57.4	6.8e-31
AUY32631.1|1149122_1150619_-|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	62.7	6.3e-174
AUY32632.1|1150615_1150795_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
AUY32633.1|1150791_1151391_-	hypothetical protein	NA	B5TK65	Pseudomonas_phage	43.2	3.4e-38
AUY32634.1|1151400_1151856_-	hypothetical protein	NA	Q8HAC8	Salmonella_phage	32.9	9.3e-12
AUY32635.1|1151812_1152196_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AUY32636.1|1152180_1152564_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1J0GUX7	Halomonas_phage	44.1	1.2e-17
AUY32637.1|1152578_1153802_-|capsid	phage major capsid protein	capsid	Q8SBH8	Shigella_phage	52.0	3.9e-113
AUY32638.1|1153817_1154435_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1J0GUZ0	Halomonas_phage	55.9	1.6e-54
AUY32639.1|1154438_1155665_-|portal	phage portal protein	portal	A0A1J0GUY8	Halomonas_phage	69.6	1.8e-155
1155598:1155615	attL	TTGCTGTTCATCGGCGTG	NA	NA	NA	NA
AUY32640.1|1155814_1157551_-|terminase	terminase	terminase	U5P0Q5	Shigella_phage	52.1	3.3e-166
AUY32641.1|1157559_1158036_-|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	47.6	1.4e-29
AUY32642.1|1158440_1158821_-	endonuclease	NA	Q38456	Bacillus_phage	36.8	2.9e-06
AUY32643.1|1158824_1159148_-|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	55.2	9.8e-24
AUY32644.1|1159496_1159694_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32645.1|1159937_1160156_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32646.1|1160386_1161592_+	PAS domain-containing sensor histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	34.0	1.0e-28
AUY32647.1|1161663_1162047_-	antitermination protein Q	NA	A0A1W6JTD2	Pseudomonas_phage	57.6	2.0e-36
AUY32648.1|1162050_1162368_-	hypothetical protein	NA	A0A2D1GNG3	Pseudomonas_phage	61.9	1.1e-30
AUY32649.1|1162364_1163666_-|integrase	integrase	integrase	A0A2D1GND4	Pseudomonas_phage	56.0	1.3e-127
AUY32650.1|1163662_1163959_-	DUF1364 domain-containing protein	NA	A5VW86	Enterobacteria_phage	72.5	1.8e-32
AUY32651.1|1163940_1164153_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32652.1|1164149_1164833_-	Replication protein P	NA	W6MVG8	Pseudomonas_phage	46.2	1.9e-48
AUY32653.1|1164829_1165558_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AUY32654.1|1165791_1166037_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32655.1|1166170_1166398_-	hypothetical protein	NA	A0A1W6JTD1	Pseudomonas_phage	56.0	9.0e-16
AUY37090.1|1166544_1167243_+	peptidase	NA	W6MVG5	Pseudomonas_phage	60.1	9.7e-69
AUY32656.1|1167556_1167739_+	hypothetical protein	NA	H8ZLZ9	Pseudomonas_phage	76.3	5.5e-16
AUY32657.1|1168232_1168973_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY32658.1|1168969_1170490_-|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
AUY32659.1|1170757_1171030_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32660.1|1171043_1171412_+	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	47.7	1.3e-11
AUY32661.1|1171434_1171650_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32662.1|1171762_1172308_+	hypothetical protein	NA	A0A2I7RIF7	Vibrio_phage	31.3	1.0e-20
AUY32663.1|1172420_1173215_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32664.1|1173301_1173787_+	hypothetical protein	NA	NA	NA	NA	NA
AUY32665.1|1173790_1174072_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32666.1|1174355_1174535_-	hypothetical protein	NA	NA	NA	NA	NA
AUY32667.1|1174603_1174846_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AUY32668.1|1174847_1175909_+|integrase	integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	58.8	6.8e-106
AUY32669.1|1176254_1176926_+	BAX inhibitor (BI)-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	91.9	2.8e-105
AUY32670.1|1177138_1178518_+	xanthine permease XanP	NA	H9YQ34	environmental_Halophage	51.1	2.2e-27
AUY32671.1|1178603_1178996_+	sulfurtransferase TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	79.8	5.0e-54
AUY32672.1|1178997_1179357_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	65.0	5.6e-36
AUY32673.1|1179356_1179653_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	65.7	7.8e-28
AUY32674.1|1179649_1179985_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	76.6	3.4e-43
AUY32675.1|1179981_1180998_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	79.9	5.4e-153
AUY32676.1|1181095_1182055_+	glutathione-dependent reductase	NA	NA	NA	NA	NA
AUY32677.1|1182171_1183563_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AUY32678.1|1183563_1184844_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.4	3.5e-96
1187313:1187330	attR	TTGCTGTTCATCGGCGTG	NA	NA	NA	NA
>prophage 3
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	2158690	2241942	6313552	bacteriocin,terminase,plate,portal,lysis,capsid,tail,holin,tRNA,head,integrase,transposase	Pseudomonas_phage(38.6%)	95	2175430:2175451	2254168:2254189
AUY33499.1|2158690_2160466_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	27.0	3.9e-13
AUY33500.1|2160560_2160782_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AUY37132.1|2160870_2161197_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AUY33501.1|2161393_2161867_-	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	37.9	6.2e-19
AUY33502.1|2162147_2162741_+	cold shock domain-containing protein	NA	A0A1X9IGI9	Lactococcus_phage	48.3	2.3e-10
AUY37133.1|2162760_2162949_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33503.1|2162975_2163395_-	HIT family protein	NA	NA	NA	NA	NA
AUY33504.1|2164138_2165167_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY33505.1|2165273_2166578_+	porin	NA	NA	NA	NA	NA
AUY33506.1|2166734_2168450_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
AUY33507.1|2168471_2169425_+	hypothetical protein	NA	NA	NA	NA	NA
AUY33508.1|2169460_2170525_-	DNA polymerase IV	NA	NA	NA	NA	NA
AUY33509.1|2171467_2174110_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
AUY33510.1|2174109_2175402_+	virulence factor family protein	NA	NA	NA	NA	NA
2175430:2175451	attL	TCGCGGGGCAAGCCCGCTCCCA	NA	NA	NA	NA
AUY33511.1|2175504_2177415_-	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	35.2	4.8e-78
AUY33512.1|2177650_2178982_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AUY33513.1|2179067_2179526_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUY33514.1|2179647_2180358_+	RNA-binding protein	NA	NA	NA	NA	NA
AUY33515.1|2180408_2180870_+	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	49.3	1.4e-36
AUY33516.1|2180876_2181569_+|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
AUY33517.1|2181647_2182427_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AUY33518.1|2182547_2183474_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUY33519.1|2183477_2183843_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AUY33520.1|2183920_2184571_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AUY33521.1|2184828_2185539_-	DTW domain-containing protein	NA	NA	NA	NA	NA
AUY33522.1|2185753_2186173_+	hypothetical protein	NA	NA	NA	NA	NA
AUY37134.1|2186174_2186381_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33523.1|2186685_2187804_+	LOG family protein	NA	NA	NA	NA	NA
AUY33524.1|2187873_2188344_-	recombination regulator RecX	NA	NA	NA	NA	NA
AUY33525.1|2188353_2189430_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	62.4	1.3e-112
AUY33526.1|2189534_2190017_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	76.1	3.5e-57
AUY37135.1|2190076_2190538_-|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	59.2	1.4e-34
AUY33527.1|2190570_2191122_-	lysozyme	NA	B5TK83	Pseudomonas_phage	68.9	2.2e-71
AUY33528.1|2191108_2191318_-	Com family DNA-binding transcriptional regulator	NA	B5TK59	Pseudomonas_phage	65.8	9.2e-07
AUY33529.1|2191411_2192446_-	late control protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	70.5	3.8e-138
AUY33530.1|2192462_2192669_-|tail	phage tail protein	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	68.7	3.2e-20
AUY33531.1|2192643_2193489_-|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	55.0	1.2e-81
AUY33532.1|2193500_2195369_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33533.1|2195591_2195894_-|tail	phage tail assembly protein	tail	A0A2H4J873	uncultured_Caudovirales_phage	58.5	2.5e-21
AUY33534.1|2195906_2196416_-|tail	phage major tail tube protein	tail	A0A2H4JBU0	uncultured_Caudovirales_phage	71.9	5.3e-64
AUY33535.1|2196429_2197596_-|tail	phage tail sheath family protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	81.0	1.9e-178
AUY33536.1|2197698_2198406_-|tail	tail fiber assembly protein	tail	A0A0M4QWM3	Salmonella_phage	35.9	1.5e-21
AUY33537.1|2198414_2200049_-|tail	phage tail protein	tail	A0A077K818	Ralstonia_phage	43.8	5.0e-108
AUY33538.1|2200041_2200650_-|tail	phage tail protein I	tail	A0A2H4JDH5	uncultured_Caudovirales_phage	64.5	3.3e-73
AUY33539.1|2200651_2201533_-|plate	baseplate assembly protein	plate	A0A2H4JFK9	uncultured_Caudovirales_phage	66.6	1.4e-104
AUY33540.1|2201529_2201856_-|plate	phage baseplate protein	plate	A0A2H4JA09	uncultured_Caudovirales_phage	67.9	1.6e-34
AUY33541.1|2202032_2202677_-	hypothetical protein	NA	B5TK60	Pseudomonas_phage	66.2	1.7e-75
AUY33542.1|2202696_2203257_-|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	63.3	6.4e-55
AUY33543.1|2203253_2203751_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33544.1|2203813_2204644_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
AUY33545.1|2204654_2204843_-	Com family DNA-binding transcriptional regulator	NA	B5TK59	Pseudomonas_phage	65.8	1.3e-07
AUY33546.1|2204867_2205215_-|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	83.2	9.2e-44
AUY33547.1|2205439_2206960_+|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
AUY33548.1|2206956_2207697_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY33549.1|2208136_2208883_-	XRE family transcriptional regulator	NA	B5TK58	Pseudomonas_phage	83.3	1.0e-116
AUY33550.1|2208996_2209200_+	hypothetical protein	NA	NA	NA	NA	NA
AUY33551.1|2209989_2210526_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33552.1|2211335_2211887_-	lysozyme	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	69.8	6.1e-66
AUY37136.1|2211949_2212270_-	hypothetical protein	NA	A0A2H4J9Z7	uncultured_Caudovirales_phage	47.9	3.2e-11
AUY33553.1|2212364_2213849_-	hypothetical protein	NA	A0A077K818	Ralstonia_phage	59.6	8.5e-38
AUY33554.1|2213855_2214416_-|tail	phage tail protein	tail	B5TK76	Pseudomonas_phage	59.0	3.2e-54
AUY33555.1|2214442_2215483_-|plate	baseplate J protein	plate	B5TK75	Pseudomonas_phage	57.2	2.5e-100
AUY33556.1|2215472_2215871_-	hypothetical protein	NA	B5TK74	Pseudomonas_phage	53.7	8.6e-30
AUY33557.1|2215867_2216377_-|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	69.6	4.8e-57
AUY33558.1|2216373_2217486_-|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	58.0	6.0e-113
AUY33559.1|2217490_2218840_-	hypothetical protein	NA	B5TK71	Pseudomonas_phage	36.9	1.1e-71
AUY37137.1|2218836_2221032_-|tail	phage tail tape measure protein	tail	U5P420	Shigella_phage	51.2	1.0e-111
AUY33560.1|2221161_2221461_-	ArsR family transcriptional regulator	NA	B5TK69	Pseudomonas_phage	59.3	1.7e-22
AUY33561.1|2221460_2221808_-|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	57.4	6.8e-31
AUY33562.1|2221865_2223362_-|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	62.4	5.3e-173
AUY37138.1|2223358_2223529_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
AUY33563.1|2223534_2224134_-	hypothetical protein	NA	B5TK65	Pseudomonas_phage	44.2	1.2e-38
AUY37139.1|2224143_2224578_-	hypothetical protein	NA	Q8HAC8	Salmonella_phage	31.0	2.2e-10
AUY33564.1|2224555_2224948_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AUY33565.1|2224950_2225502_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33566.1|2225504_2225765_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33567.1|2225811_2227134_-|capsid	phage major capsid protein	capsid	A4JX01	Burkholderia_virus	53.2	1.6e-120
AUY37140.1|2227202_2228084_-|capsid	capsid protein	capsid	A4JX00	Burkholderia_virus	57.7	1.4e-88
AUY33568.1|2228146_2229415_-|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	60.0	8.9e-145
AUY33569.1|2229590_2231423_-|terminase	phage terminase small subunit P27 family	terminase	A0A0U2C138	Paracoccus_phage	39.7	2.1e-110
AUY33570.1|2231385_2231919_-|terminase	phage terminase small subunit P27 family	terminase	A0A0S2GLF2	Bacillus_phage	29.6	1.1e-06
AUY33571.1|2232060_2232426_-	HNH endonuclease	NA	F1C587	Cronobacter_phage	53.8	6.9e-26
AUY33572.1|2232415_2232757_-|holin	holin	holin	B5TK61	Pseudomonas_phage	76.9	5.3e-44
AUY33573.1|2232961_2233489_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33574.1|2234063_2236631_-	DNA primase	NA	A0A2H4JF22	uncultured_Caudovirales_phage	44.0	3.8e-195
AUY33575.1|2236627_2236831_-	transcriptional regulator	NA	NA	NA	NA	NA
AUY33576.1|2236823_2237312_-	hypothetical protein	NA	A0A2H4JFM0	uncultured_Caudovirales_phage	55.5	6.0e-33
AUY33577.1|2237520_2237730_-	hypothetical protein	NA	NA	NA	NA	NA
AUY37141.1|2237846_2238674_+	XRE family transcriptional regulator	NA	A0A0A0YR73	Pseudomonas_phage	45.9	2.2e-59
AUY33578.1|2238971_2239481_+	hypothetical protein	NA	NA	NA	NA	NA
AUY33579.1|2239477_2239717_+	transcriptional regulator	NA	A0A2H4J8B4	uncultured_Caudovirales_phage	57.0	8.6e-17
AUY33580.1|2239806_2240307_+	hypothetical protein	NA	NA	NA	NA	NA
AUY33581.1|2240303_2240492_+	hypothetical protein	NA	NA	NA	NA	NA
AUY37142.1|2240758_2240950_+	hypothetical protein	NA	A0A1B0VMB6	Pseudomonas_phage	59.7	7.5e-16
AUY33582.1|2240964_2241942_+|integrase	integrase	integrase	A0A1B0VP19	Pseudomonas_phage	69.9	1.5e-128
2254168:2254189	attR	TCGCGGGGCAAGCCCGCTCCCA	NA	NA	NA	NA
>prophage 4
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	2339634	2346594	6313552		uncultured_Caudovirales_phage(87.5%)	13	NA	NA
AUY33663.1|2339634_2339844_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	63.2	7.2e-12
AUY33664.1|2339840_2340230_-	hypothetical protein	NA	A0A2H4J167	uncultured_Caudovirales_phage	46.5	1.8e-24
AUY33665.1|2340257_2340623_-	hypothetical protein	NA	A0A2H4J170	uncultured_Caudovirales_phage	42.9	6.1e-14
AUY37145.1|2340640_2341090_+	hypothetical protein	NA	NA	NA	NA	NA
AUY37146.1|2341079_2341382_-	DNA polymerase III subunit beta	NA	NA	NA	NA	NA
AUY33666.1|2341457_2341667_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	45.0	2.0e-06
AUY33667.1|2341729_2341960_-	hypothetical protein	NA	NA	NA	NA	NA
AUY33668.1|2342178_2342547_-	transcriptional regulator	NA	NA	NA	NA	NA
AUY33669.1|2342698_2343874_-	DUF3800 domain-containing protein	NA	A0A2H4J132	uncultured_Caudovirales_phage	74.1	3.8e-166
AUY33670.1|2343890_2344259_-	hypothetical protein	NA	A0A2H4J9F9	uncultured_Caudovirales_phage	87.6	2.3e-53
AUY33671.1|2344499_2344844_+	stress-induced protein	NA	NA	NA	NA	NA
AUY33672.1|2344898_2346179_-	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	50.4	3.4e-112
AUY33673.1|2346165_2346594_-	peptidase S24	NA	A0A2H4J538	uncultured_Caudovirales_phage	43.5	1.3e-20
>prophage 5
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	2515722	2524603	6313552	transposase	Staphylococcus_phage(28.57%)	11	NA	NA
AUY33825.1|2515722_2516532_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.5	3.4e-25
AUY33826.1|2516777_2517752_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	33.6	8.0e-37
AUY33827.1|2517752_2518277_+	phenylphosphate carboxylase subunit delta	NA	A0A140XBD6	Dickeya_phage	46.6	2.0e-26
AUY33828.1|2518285_2518858_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AUY33829.1|2518844_2519369_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AUY33830.1|2519369_2520095_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	8.4e-23
AUY33831.1|2520220_2521249_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY33832.1|2521385_2522882_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA	NA
AUY33833.1|2522960_2523269_+	ribosome-associated translation inhibitor RaiA	NA	A0A0M7QH33	Escherichia_phage	33.0	4.4e-05
AUY33834.1|2523281_2523746_+	PTS IIA-like nitrogen-regulatory protein PtsN	NA	NA	NA	NA	NA
AUY33835.1|2523748_2524603_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.0	1.5e-07
>prophage 6
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	3239602	3249442	6313552		Burkholderia_phage(33.33%)	7	NA	NA
AUY34446.1|3239602_3241591_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	37.3	3.2e-72
AUY34447.1|3241658_3243509_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	34.1	9.0e-37
AUY34448.1|3243629_3247373_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	A0A127AWB9	Bacillus_phage	37.9	8.8e-15
AUY34449.1|3247625_3247880_+	cytotoxic translational repressor of toxin-antitoxin stability system	NA	A0A1S5NR91	Burkholderia_phage	63.1	4.1e-25
AUY34450.1|3247863_3248190_+	XRE family transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	64.2	9.2e-30
AUY34451.1|3248320_3248692_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34452.1|3248746_3249442_-	antibiotic acetyltransferase	NA	A0A2R8FE91	Brazilian_cedratvirus	42.5	5.2e-14
>prophage 7
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	3317031	3388291	6313552	holin,plate,transposase,protease	uncultured_Caudovirales_phage(22.22%)	59	NA	NA
AUY34507.1|3317031_3317532_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
AUY34508.1|3317714_3318602_+	acyltransferase	NA	NA	NA	NA	NA
AUY34509.1|3318772_3320122_+	Putrescine importer PuuP	NA	NA	NA	NA	NA
AUY34510.1|3320175_3320739_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34511.1|3320948_3321140_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34512.1|3321657_3322509_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34513.1|3322834_3324034_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	28.9	7.6e-13
AUY34514.1|3324241_3325099_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AUY34515.1|3325110_3325743_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
AUY34516.1|3325887_3328905_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
AUY34517.1|3328901_3329237_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA	NA
AUY34518.1|3329254_3330505_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
AUY34519.1|3330520_3331774_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.2	7.8e-101
AUY34520.1|3332068_3333109_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
AUY34521.1|3333179_3335117_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	57.3	1.7e-09
AUY34522.1|3335268_3335571_-	cell division protein ZapA	NA	NA	NA	NA	NA
AUY34523.1|3335567_3335798_-	hypothetical protein	NA	NA	NA	NA	NA
AUY37181.1|3336074_3337700_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	46.2	1.7e-76
AUY34524.1|3337787_3338888_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUY34525.1|3339185_3340478_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
AUY34526.1|3340620_3341403_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34527.1|3342141_3342912_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
AUY34528.1|3342922_3344155_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AUY34529.1|3344154_3346107_-	(Fe-S)-binding protein	NA	NA	NA	NA	NA
AUY34530.1|3346283_3348344_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AUY34531.1|3348359_3348890_-	hydrocarbon binding protein	NA	NA	NA	NA	NA
AUY34532.1|3348967_3349945_-	membrane dipeptidase	NA	NA	NA	NA	NA
AUY34533.1|3350219_3350621_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
AUY34534.1|3350676_3352353_-	DUF4153 domain-containing protein	NA	NA	NA	NA	NA
AUY34535.1|3352814_3354656_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AUY34536.1|3354721_3355780_-|holin	phosphorylcholine phosphatase	holin	NA	NA	NA	NA
AUY34537.1|3356024_3357416_+	L-cystine transporter	NA	NA	NA	NA	NA
AUY34538.1|3357449_3357965_-	dihydrofolate reductase	NA	F8SJN4	Pseudomonas_phage	46.8	4.1e-24
AUY34539.1|3358019_3359411_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AUY34540.1|3359403_3360768_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	41.9	3.2e-55
AUY34541.1|3360775_3361189_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34542.1|3361185_3361620_-	hypothetical protein	NA	NA	NA	NA	NA
AUY37182.1|3361616_3362477_-	NAD synthetase	NA	NA	NA	NA	NA
AUY34543.1|3362641_3363568_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AUY34544.1|3363646_3365413_-	type VI secretion protein	NA	NA	NA	NA	NA
AUY34545.1|3365405_3366608_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34546.1|3366607_3367312_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	30.5	4.3e-08
AUY34547.1|3367311_3370314_-	serine/threonine protein kinase	NA	M1PCM5	Moumouvirus	27.6	5.0e-21
AUY34548.1|3370321_3371041_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
AUY34549.1|3371037_3371694_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AUY34550.1|3371690_3375197_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AUY34551.1|3375193_3376510_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
AUY34552.1|3376516_3377851_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AUY34553.1|3377866_3378361_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AUY34554.1|3378410_3379526_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AUY34555.1|3379500_3380529_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY34556.1|3381290_3382331_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AUY34557.1|3382403_3382919_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AUY34558.1|3382930_3384424_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AUY34559.1|3384514_3385003_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AUY34560.1|3385078_3385513_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34561.1|3385509_3385923_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34562.1|3385916_3386432_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AUY34563.1|3386428_3388291_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
>prophage 8
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	3723376	3788055	6313552	holin,tRNA,transposase	uncultured_Caudovirales_phage(20.0%)	58	NA	NA
AUY34832.1|3723376_3725026_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	30.1	1.4e-54
AUY34833.1|3725200_3726088_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUY34834.1|3726076_3726895_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AUY34835.1|3726891_3728169_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AUY34836.1|3728210_3729095_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AUY34837.1|3729339_3730638_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AUY34838.1|3730718_3731357_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34839.1|3731494_3733915_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.7	4.8e-115
AUY34840.1|3733919_3735023_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
AUY34841.1|3735038_3736142_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	37.3	6.1e-57
AUY34842.1|3736185_3737712_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
AUY34843.1|3738306_3738441_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
AUY34844.1|3738454_3738856_+	ribonuclease P protein component	NA	NA	NA	NA	NA
AUY34845.1|3738848_3739094_+	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
AUY34846.1|3739096_3740779_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
AUY34847.1|3740862_3742236_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
AUY34848.1|3742773_3744666_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AUY34849.1|3744662_3745313_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
AUY34850.1|3745331_3746123_+	ParA family protein	NA	Q8JL10	Natrialba_phage	35.3	5.0e-21
AUY34851.1|3746132_3747005_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	32.8	6.6e-14
AUY34852.1|3747154_3747562_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA	NA
AUY34853.1|3747578_3748448_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
AUY34854.1|3748592_3748850_+	ATP synthase subunit C	NA	NA	NA	NA	NA
AUY34855.1|3748907_3749378_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
AUY34856.1|3749390_3749927_+	ATP synthase subunit delta	NA	NA	NA	NA	NA
AUY34857.1|3749948_3751493_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
AUY34858.1|3751541_3752402_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
AUY34859.1|3752429_3753806_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
AUY34860.1|3753850_3754270_+	ATP synthase epsilon chain	NA	NA	NA	NA	NA
AUY34861.1|3754391_3755759_+	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	33.3	3.0e-29
AUY34862.1|3755902_3756670_+	HTH domain-containing protein	NA	NA	NA	NA	NA
AUY34863.1|3756682_3758518_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	43.6	1.1e-130
AUY34864.1|3758836_3759688_+	endonuclease	NA	NA	NA	NA	NA
AUY34865.1|3759680_3761852_+|transposase	transposase	transposase	NA	NA	NA	NA
AUY34866.1|3761844_3763293_+|transposase	transposase	transposase	NA	NA	NA	NA
AUY34867.1|3763317_3764787_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34868.1|3764981_3766010_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY34869.1|3765965_3766157_+	hypothetical protein	NA	NA	NA	NA	NA
AUY34870.1|3766817_3767729_+	DUF4238 domain-containing protein	NA	NA	NA	NA	NA
AUY34871.1|3767772_3768102_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34872.1|3768098_3768584_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34873.1|3769421_3769808_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AUY34874.1|3769953_3770286_+	DUF2790 domain-containing protein	NA	NA	NA	NA	NA
AUY34875.1|3770423_3770612_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AUY34876.1|3770717_3771173_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
AUY34877.1|3771162_3771945_-	cytochrome c	NA	NA	NA	NA	NA
AUY34878.1|3771955_3773071_-	copper resistance protein B	NA	NA	NA	NA	NA
AUY37193.1|3773060_3773384_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34879.1|3773398_3775216_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AUY34880.1|3775397_3775604_-	hypothetical protein	NA	NA	NA	NA	NA
AUY34881.1|3775769_3776447_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.0	7.8e-31
AUY34882.1|3776446_3777853_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
AUY34883.1|3778964_3780500_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	45.9	1.6e-116
AUY34884.1|3780533_3781067_-	NUDIX domain-containing protein	NA	A0A2H4J8B3	uncultured_Caudovirales_phage	96.2	2.4e-67
AUY34885.1|3781159_3782011_-	universal stress protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	92.9	1.9e-143
AUY34886.1|3782022_3783510_-	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	98.2	7.0e-266
AUY34887.1|3785797_3786538_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY34888.1|3786534_3788055_-|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
>prophage 9
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	3904103	3956428	6313552	capsid,head,tail,integrase,protease	Pseudomonas_phage(15.38%)	57	3945756:3945806	3955400:3955450
AUY34995.1|3904103_3905591_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AUY34996.1|3905641_3906076_-	DUF2493 domain-containing protein	NA	A0A2R8FFH8	Brazilian_cedratvirus	28.3	4.6e-08
AUY34997.1|3906086_3908798_-	magnesium-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	22.7	2.2e-36
AUY34998.1|3909599_3910028_-	transporter	NA	NA	NA	NA	NA
AUY34999.1|3910052_3910316_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35000.1|3910722_3911061_+	transcriptional regulator	NA	NA	NA	NA	NA
AUY35001.1|3911108_3912443_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	29.4	7.4e-33
AUY35002.1|3912873_3913203_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35003.1|3913264_3913960_-	HAD family hydrolase	NA	NA	NA	NA	NA
AUY35004.1|3913956_3914856_-	tyrosine recombinase XerC	NA	A0A142F1N9	Bacillus_phage	23.3	1.1e-19
AUY35005.1|3914855_3915566_-	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AUY35006.1|3915579_3916410_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
AUY35007.1|3916414_3917662_-	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AUY35008.1|3917671_3917878_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35009.1|3918085_3918418_+	iron donor protein CyaY	NA	NA	NA	NA	NA
AUY35010.1|3918419_3918638_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AUY35011.1|3918793_3919204_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
AUY35012.1|3919209_3922074_-	class I adenylate cyclase	NA	NA	NA	NA	NA
AUY35013.1|3922242_3922494_-	TIGR02647 family protein	NA	NA	NA	NA	NA
AUY35014.1|3922545_3922848_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35015.1|3922994_3923657_+	glutathione S-transferase	NA	NA	NA	NA	NA
AUY35016.1|3923752_3925147_-	argininosuccinate lyase	NA	NA	NA	NA	NA
AUY35017.1|3925443_3926193_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUY35018.1|3926376_3927318_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
AUY35019.1|3927314_3928085_+	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
AUY35020.1|3928131_3929229_+	heme biosynthesis operon protein HemX	NA	NA	NA	NA	NA
AUY35021.1|3929225_3930464_+	heme biosynthesis protein HemY	NA	NA	NA	NA	NA
AUY35022.1|3930733_3931231_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AUY35023.1|3931461_3931932_+	sigma D regulator	NA	NA	NA	NA	NA
AUY35024.1|3931933_3932599_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
AUY35025.1|3932823_3933828_+	transcriptional regulator	NA	NA	NA	NA	NA
AUY35026.1|3933803_3934283_-	TIGR02444 family protein	NA	NA	NA	NA	NA
AUY35027.1|3934333_3936244_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.8	3.3e-66
AUY35028.1|3936243_3936831_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AUY35029.1|3936910_3937543_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AUY35030.1|3937609_3938362_-	hypothetical protein	NA	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	30.2	9.3e-25
AUY35031.1|3938365_3939709_-|protease	serine protease	protease	NA	NA	NA	NA
AUY35032.1|3939805_3940264_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35033.1|3940323_3940566_+	DUF2789 domain-containing protein	NA	NA	NA	NA	NA
AUY35034.1|3940636_3941275_+	NADH:ubiquinone oxidoreductase subunit N	NA	NA	NA	NA	NA
AUY35035.1|3941281_3941719_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AUY35036.1|3941865_3943596_-	dipeptidase	NA	NA	NA	NA	NA
AUY35037.1|3943815_3945666_+	hypothetical protein	NA	NA	NA	NA	NA
3945756:3945806	attL	TCATGGCGCACTCGGCGGGATTCGAACCCACGACCCCTGCCTTCGGAGGGC	NA	NA	NA	NA
AUY37199.1|3945933_3947145_+|integrase	integrase	integrase	H2BDD9	Pseudomonas_virus	33.1	1.5e-29
AUY35038.1|3947145_3947694_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35039.1|3947872_3948073_+	DNA-binding protein	NA	NA	NA	NA	NA
AUY35040.1|3948069_3948717_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35041.1|3948784_3949189_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUY35042.1|3949367_3949652_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35043.1|3949890_3951183_+|integrase	integrase	integrase	A0A2D1GND4	Pseudomonas_phage	50.8	2.0e-112
AUY35044.1|3951179_3951380_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35045.1|3951557_3952232_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	42.9	7.5e-26
AUY35046.1|3952241_3953366_+|capsid	phage major capsid protein	capsid	A0A2H4JD98	uncultured_Caudovirales_phage	32.2	1.9e-37
AUY35047.1|3953747_3954110_+	hypothetical protein	NA	A0A1B0VML3	Pseudomonas_phage	59.6	3.9e-29
AUY35048.1|3954112_3954700_+|tail	tail assembly protein	tail	A0A2H4J1H0	uncultured_Caudovirales_phage	69.9	3.6e-64
AUY35049.1|3954751_3955183_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35050.1|3955564_3956428_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.6	8.1e-33
3955400:3955450	attR	TCATGGCGCACTCGGCGGGATTCGAACCCACGACCCCTGCCTTCGGAGGGC	NA	NA	NA	NA
>prophage 10
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	4033235	4072691	6313552	integrase,transposase	Escherichia_phage(33.33%)	37	4030646:4030660	4039793:4039807
4030646:4030660	attL	CGAAGTGGTCAAGGA	NA	NA	NA	NA
AUY35113.1|4033235_4034441_+|integrase	integrase	integrase	A0A1X9TCT6	Enterobacter_phage	23.4	3.0e-09
AUY35114.1|4034437_4035502_+	DUF1016 domain-containing protein	NA	A0A0U2BZN7	Salmonella_phage	42.0	8.5e-24
AUY35115.1|4035763_4036834_-	serine/threonine protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	30.8	7.0e-18
AUY35116.1|4036830_4037907_-	serine/threonine protein kinase	NA	G9BWE0	Planktothrix_phage	41.0	1.3e-48
AUY35117.1|4039493_4040003_+	DNA repair protein RadC	NA	NA	NA	NA	NA
4039793:4039807	attR	CGAAGTGGTCAAGGA	NA	NA	NA	NA
AUY35118.1|4040070_4042374_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35119.1|4042920_4043751_+	hypothetical protein	NA	A0A2C9CYF8	Yersinia_phage	38.3	8.1e-46
AUY35120.1|4043831_4045901_+	chromosome partitioning protein ParB	NA	G8DH78	Emiliania_huxleyi_virus	27.0	4.5e-21
AUY35121.1|4045960_4046170_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35122.1|4047055_4048576_+|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
AUY35123.1|4048572_4049313_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY35124.1|4049388_4049703_+	DUF736 domain-containing protein	NA	NA	NA	NA	NA
AUY37202.1|4049778_4050339_-	disease resistance protein	NA	NA	NA	NA	NA
AUY35125.1|4050719_4051013_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUY35126.1|4051284_4051632_+	hypothetical protein	NA	A0A1W6DX76	Sphingobium_phage	45.0	3.6e-16
AUY35127.1|4051954_4052725_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35128.1|4052837_4053122_+	DNA-binding protein	NA	NA	NA	NA	NA
AUY37203.1|4053148_4053994_+	RepA replication protein	NA	NA	NA	NA	NA
AUY35129.1|4053996_4054251_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35130.1|4054247_4054886_+	ATPase	NA	B0ZSI1	Halomonas_phage	39.0	9.6e-31
AUY37204.1|4054882_4055134_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
AUY35131.1|4055130_4055676_+|transposase	transposase	transposase	NA	NA	NA	NA
AUY35132.1|4055672_4056272_+	peptidase	NA	NA	NA	NA	NA
AUY35133.1|4056268_4056724_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35134.1|4056720_4058703_+	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
AUY35135.1|4058695_4060006_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35136.1|4060305_4060923_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AUY35137.1|4060935_4061271_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AUY35138.1|4061461_4064509_-	acriflavin resistance protein	NA	NA	NA	NA	NA
AUY35139.1|4064643_4065348_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUY35140.1|4065338_4065521_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35141.1|4065484_4066345_+	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
AUY35142.1|4066365_4067127_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AUY35143.1|4068912_4070175_+|transposase	IS1380 family transposase ISEc9	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
AUY35144.1|4070338_4070656_+	hypothetical protein	NA	NA	NA	NA	NA
AUY37205.1|4070664_4071309_-	quinolone resistance pentapeptide repeat protein QnrB19	NA	NA	NA	NA	NA
AUY35145.1|4071986_4072691_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 11
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	4161026	4202827	6313552	holin,tRNA,transposase	Bacillus_virus(20.0%)	41	NA	NA
AUY35235.1|4161026_4162205_-|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	36.2	3.2e-24
AUY35236.1|4162201_4163047_-|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
AUY35237.1|4163131_4164079_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AUY35238.1|4164523_4165900_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
AUY35239.1|4166289_4167396_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AUY35240.1|4167859_4168888_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.5	1.4e-47
AUY35241.1|4169299_4169557_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35242.1|4169893_4171201_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35243.1|4171241_4171712_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
AUY35244.1|4171722_4172688_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AUY35245.1|4172708_4173593_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
AUY35246.1|4173699_4174644_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AUY35247.1|4174790_4175738_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AUY35248.1|4175817_4177014_-	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA	NA
AUY35249.1|4177191_4178064_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
AUY35250.1|4178067_4178880_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	26.3	1.6e-17
AUY35251.1|4178916_4180599_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AUY35252.1|4180598_4180850_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	58.4	1.3e-20
AUY35253.1|4180959_4181439_-	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	43.0	9.7e-28
AUY35254.1|4181550_4183149_-	GMC family oxidoreductase	NA	NA	NA	NA	NA
AUY35255.1|4183172_4183658_-	twin-arginine translocation pathway signal protein	NA	NA	NA	NA	NA
AUY35256.1|4183657_4185088_-	coniferyl aldehyde dehydrogenase	NA	NA	NA	NA	NA
AUY37207.1|4185234_4185900_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AUY35257.1|4185934_4186789_+	sulfurtransferase	NA	NA	NA	NA	NA
AUY35258.1|4186879_4187872_-	hydrolase	NA	NA	NA	NA	NA
AUY35259.1|4187932_4188547_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AUY35260.1|4188546_4190040_-	insulinase family protein	NA	NA	NA	NA	NA
AUY35261.1|4190032_4191388_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	24.9	5.0e-21
AUY35262.1|4191622_4193119_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
AUY35263.1|4193115_4193787_+	cell division ATP-binding protein FtsE	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.3	1.1e-13
AUY35264.1|4193783_4194812_+	ABC transporter permease	NA	NA	NA	NA	NA
AUY35265.1|4194923_4195778_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	38.5	2.8e-41
AUY35266.1|4195870_4196581_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
AUY35267.1|4196645_4197017_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AUY37208.1|4197120_4197321_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
AUY35268.1|4197374_4198187_+	thiazole synthase	NA	NA	NA	NA	NA
AUY35269.1|4198196_4198919_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AUY35270.1|4198983_4199778_+	hypothetical protein	NA	NA	NA	NA	NA
AUY35271.1|4199948_4200275_-	DUF3392 domain-containing protein	NA	NA	NA	NA	NA
AUY35272.1|4200569_4201310_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY35273.1|4201306_4202827_-|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
>prophage 12
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	4438026	4447929	6313552	tRNA,transposase	Bacillus_phage(28.57%)	11	NA	NA
AUY35461.1|4438026_4438569_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	38.6	3.0e-25
AUY35462.1|4438657_4439269_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
AUY35463.1|4439833_4440298_-	hypothetical protein	NA	A0A2I6AZV9	Macacine_betaherpesvirus	55.1	5.0e-45
AUY35464.1|4440346_4441087_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY35465.1|4441083_4442604_-|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
AUY35466.1|4442714_4443293_-	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	37.1	1.0e-15
AUY35467.1|4443112_4443655_-	helix-turn-helix domain-containing protein	NA	A0A1B1P776	Bacillus_phage	37.0	4.6e-18
AUY35468.1|4444044_4445109_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AUY35469.1|4445173_4446025_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AUY35470.1|4446012_4446486_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AUY35471.1|4446498_4447929_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A067ZJB6	Vibrio_phage	29.8	3.1e-13
>prophage 13
CP026386	Pseudomonas sp. PONIH3 chromosome, complete genome	6313552	4908619	4917722	6313552	tRNA,transposase	Vibrio_phage(16.67%)	8	NA	NA
AUY35864.1|4908619_4908916_+	GIY-YIG nuclease family protein	NA	A0A2I7QNM5	Vibrio_phage	34.6	4.9e-06
AUY35865.1|4909031_4909274_-	hypothetical protein	NA	NA	NA	NA	NA
AUY35866.1|4909618_4910626_-	nucleoid-associated protein YejK	NA	L7TI92	Pseudomonas_virus	78.0	2.5e-150
AUY35867.1|4911049_4912570_+|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.0	7.1e-24
AUY35868.1|4912566_4913307_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.0	5.5e-46
AUY35869.1|4913476_4913758_+	HU family DNA-binding protein	NA	F8TVE1	EBPR_siphovirus	41.2	2.4e-10
AUY35870.1|4913805_4914756_-	23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA	NA	NA	NA	NA
AUY35871.1|4914875_4917722_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	36.3	7.1e-142
