The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	80573	92669	1857175	tRNA	Vibrio_phage(14.29%)	11	NA	NA
AVI95183.1|80573_82697_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	62.8	1.6e-260
AVI95184.1|82814_83675_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
AVI95185.1|83835_85215_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	29.7	6.6e-53
AVI95186.1|85317_85827_+	cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	32.9	7.2e-13
AVI95187.1|85881_86688_+	putative DNase	NA	NA	NA	NA	NA
AVI95188.1|86731_87265_+	hypothetical protein	NA	NA	NA	NA	NA
AVI95189.1|87323_87647_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	43.4	2.0e-16
AVI95190.1|87766_88762_-	D-lactate dehydrogenase, NAD-dependent	NA	M1H502	Paramecium_bursaria_Chlorella_virus	39.9	6.4e-66
AVI95191.1|88774_89884_-	beta-eliminating lyase family protein	NA	A0A141ZJM2	Faustovirus	26.8	1.1e-13
AVI95192.1|90475_91312_+	cobQ/CobB/MinD/ParA nucleotide binding domain protein	NA	NA	NA	NA	NA
AVI95193.1|91313_92669_+	replicative DNA helicase	NA	O80281	Escherichia_phage	43.6	3.4e-94
>prophage 2
CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1156132	1165182	1857175		Escherichia_phage(83.33%)	10	NA	NA
AVI96212.1|1156132_1156633_-	ferredoxin-type protein NapF	NA	A0A077SLP0	Escherichia_phage	32.0	3.2e-13
AVI96213.1|1156632_1157244_-	nitrate reductase delta subunit	NA	A0A077SLS7	Escherichia_phage	32.5	2.3e-21
AVI96214.1|1157355_1158150_-	dimethyl sulfoxide reductase, chain C	NA	NA	NA	NA	NA
AVI96215.1|1158196_1158814_-	dimethylsulfoxide reductase, chain B	NA	A0A077SL61	Escherichia_phage	57.3	8.3e-72
AVI96216.1|1158824_1159241_-	molybdopterin dinucleotide binding domain protein	NA	A0A077SK27	Escherichia_phage	56.2	3.8e-36
AVI96217.1|1159406_1161227_-	dimethyl sulfoxide reductase, chain A	NA	A0A077SK27	Escherichia_phage	50.3	2.3e-162
AVI96218.1|1161479_1162589_+	hypothetical protein	NA	NA	NA	NA	NA
AVI96219.1|1162563_1162926_+	merT mercuric transport family protein	NA	NA	NA	NA	NA
AVI96220.1|1162934_1163213_+	heavy-metal-associated domain protein	NA	NA	NA	NA	NA
AVI96221.1|1163337_1165182_-	ABC transporter family protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.3	2.8e-22
>prophage 3
CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1297397	1305915	1857175		Planktothrix_phage(16.67%)	9	NA	NA
AVI96351.1|1297397_1298381_-	dppF	NA	G9BWD6	Planktothrix_phage	33.2	1.4e-20
AVI96352.1|1298383_1299376_-	dppD	NA	G3M9Y6	Bacillus_virus	30.8	5.7e-14
AVI96353.1|1299385_1300273_-	dppC	NA	NA	NA	NA	NA
AVI96354.1|1300287_1301259_-	dppB	NA	NA	NA	NA	NA
AVI96355.1|1301233_1301350_+	hypothetical protein	NA	NA	NA	NA	NA
AVI96356.1|1301378_1303559_-	DNA helicase II	NA	A7KV33	Bacillus_phage	37.6	1.8e-116
AVI96357.1|1304177_1304807_-	4Fe-4S single cluster domain protein	NA	S4TZT1	uncultured_phage	30.3	8.6e-16
AVI96358.1|1304813_1305239_-	queuosine biosynthesis protein QueD	NA	A0A1U9WRB3	Streptococcus_virus	42.7	7.8e-21
AVI96359.1|1305231_1305915_-	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.7	2.3e-54
>prophage 4
CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1493942	1500621	1857175		Sodalis_phage(16.67%)	10	NA	NA
AVI96549.1|1493942_1494233_+	integration host factor, alpha subunit	NA	Q2A099	Sodalis_phage	38.2	1.5e-10
AVI96550.1|1494285_1494771_+	putative lipoprotein	NA	A0A2H5BM69	Streptomyces_phage	39.3	2.3e-16
AVI96551.1|1494836_1495790_+	WYL domain protein	NA	NA	NA	NA	NA
AVI96552.1|1495848_1496304_+	5' nucleotidase, deoxy family protein	NA	I6X231	Vibriophage	63.0	3.5e-43
AVI96553.1|1496287_1496998_+	sir2 family protein	NA	R9TG77	Vibrio_phage	40.1	3.2e-27
AVI96554.1|1497076_1497571_+	opioid growth factor receptor (OGFr) conserved region family protein	NA	NA	NA	NA	NA
AVI96555.1|1497584_1498301_+	hypothetical protein	NA	NA	NA	NA	NA
AVI96556.1|1498358_1499360_-	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	39.8	5.4e-20
AVI96557.1|1499578_1499779_+	ftsk gamma domain protein	NA	NA	NA	NA	NA
AVI96558.1|1499775_1500621_+	sir2 family protein	NA	A0A1C3S788	Escherichia_phage	22.9	7.0e-05
>prophage 5
CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1575356	1587337	1857175	tRNA	Acinetobacter_phage(42.86%)	11	NA	NA
AVI96655.1|1575356_1578203_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.5	1.7e-148
AVI96656.1|1578236_1578509_-	hydrogenase assembly chaperone HypC/HupF	NA	NA	NA	NA	NA
AVI96657.1|1578570_1580001_-	bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	NA	A0A0P0IR83	Acinetobacter_phage	38.0	1.2e-33
AVI96658.1|1580041_1581043_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	39.6	4.4e-46
AVI96659.1|1581095_1581482_-	putative anthranilate phosphoribosyltransferase	NA	NA	NA	NA	NA
AVI96660.1|1581530_1582118_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	40.0	2.2e-34
AVI96661.1|1582130_1583687_-	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	33.2	2.4e-22
AVI96662.1|1583788_1584553_-	glycosyl transferase 2 family protein	NA	A7IW34	Paramecium_bursaria_Chlorella_virus	29.1	1.5e-14
AVI96663.1|1584813_1585311_-	putative ferritin-1	NA	NA	NA	NA	NA
AVI96664.1|1585326_1585815_-	putative ferritin-1	NA	NA	NA	NA	NA
AVI96665.1|1586317_1587337_+	phosphate ABC transporter, phosphate-binding protein PstS	NA	A0A222YW41	Synechococcus_phage	40.5	1.2e-51
