The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	3	62951	4847226	lysis,integrase,tail,head,coat,terminase	Enterobacteria_phage(20.59%)	88	9585:9599	55439:55453
AVJ78470.1|3_1056_-	outer membrane pore protein E	NA	Q1MVN1	Enterobacteria_phage	59.8	6.5e-117
AVJ78471.1|1361_2465_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.9	1.0e-59
AVJ78472.1|2476_3730_+	gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	46.4	1.5e-96
AVJ78473.1|3931_5092_-|integrase	phage integrase family protein	integrase	K7P7R5	Enterobacteria_phage	92.0	1.0e-211
AVJ78474.1|5421_5748_-	hypothetical protein	NA	K7PGV7	Enterobacterial_phage	80.0	1.9e-43
AVJ78475.1|5757_5997_-	hypothetical protein	NA	M1FPC8	Enterobacteria_phage	76.9	4.4e-29
AVJ78476.1|5974_6598_-	hypothetical protein	NA	R9VWB9	Serratia_phage	47.8	3.4e-49
AVJ78477.1|6919_7111_-	hypothetical protein	NA	A0A0P0ZC60	Stx2-converting_phage	67.8	3.2e-14
AVJ78478.1|7107_7404_-	hypothetical protein	NA	A0A0U2SAZ1	Escherichia_phage	64.5	2.4e-29
AVJ78479.1|7403_7619_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78480.1|7615_8275_-	MT-A70 family protein	NA	G8C7S6	Escherichia_phage	94.1	3.2e-122
AVJ78481.1|8271_8712_-	methyltransferase domain protein	NA	H9C170	Pectobacterium_phage	76.6	5.9e-64
AVJ78482.1|9252_9381_-	putative exonuclease	NA	C6ZR35	Salmonella_phage	88.1	4.3e-15
9585:9599	attL	ACGCTTTTCGCGCAT	NA	NA	NA	NA
AVJ78483.1|9809_10352_-	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	90.5	9.6e-56
AVJ78484.1|10352_11078_-	rad52/22 double-strand break repair family protein	NA	B8K1D9	Salmonella_phage	64.5	7.7e-85
AVJ78485.1|11074_11233_-	hypothetical protein	NA	I6R9C0	Salmonella_phage	56.5	2.6e-06
AVJ78486.1|11229_11358_-	putative thioredoxin reductase	NA	NA	NA	NA	NA
AVJ78487.1|11435_12407_-	hypothetical protein	NA	M9P0E1	Enterobacteria_phage	61.8	8.0e-45
AVJ78488.1|12476_12617_-	bacteriophage lambda Kil family protein	NA	NA	NA	NA	NA
AVJ78489.1|12613_12772_-	hypothetical protein	NA	G8C7T3	Escherichia_phage	94.1	2.7e-19
AVJ78490.1|12768_12963_-	hypothetical protein	NA	B5WZV1	Pseudomonas_phage	50.9	6.1e-05
AVJ78491.1|13153_13282_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78492.1|13395_13938_-	HNH endonuclease family protein	NA	A0A0N9RV98	Escherichia_phage	44.4	1.4e-30
AVJ78493.1|14148_14274_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78494.1|14272_14470_+	hypothetical protein	NA	G8C7T7	Escherichia_phage	96.9	2.4e-25
AVJ78495.1|14496_14826_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78496.1|15243_15954_-	repressor protein CI	NA	K7P7K3	Enterobacteria_phage	70.6	1.1e-91
AVJ78497.1|16057_16246_+	regulatory protein cro	NA	A0A2R2Z333	Escherichia_phage	51.8	1.5e-08
AVJ78498.1|16332_16617_+	transcriptional activator protein C1	NA	Q5G8T2	Enterobacteria_phage	62.8	1.6e-22
AVJ78499.1|16797_17877_+	phage replication protein O, N-terminal domain	NA	E5AGE9	Erwinia_phage	46.8	2.1e-86
AVJ78500.1|17873_19247_+	dnaB-like helicase N terminal domain protein	NA	E5AGF0	Erwinia_phage	62.4	3.8e-165
AVJ78501.1|19251_19551_+	putative protein ren	NA	M1FPD5	Enterobacteria_phage	52.6	4.8e-17
AVJ78502.1|19547_19976_+	hypothetical protein	NA	G8C7U8	Escherichia_phage	61.9	5.3e-25
AVJ78503.1|19972_20233_+	putative orf-90	NA	T1S9K2	Salmonella_phage	89.3	3.4e-35
AVJ78504.1|20229_20778_+	hypothetical protein	NA	A0A193GYX5	Enterobacter_phage	51.5	4.1e-06
AVJ78505.1|20854_21784_+	hypothetical protein	NA	S4TSR6	Salmonella_phage	77.9	2.7e-34
AVJ78506.1|22297_22747_+	ninB family protein	NA	I6R9D0	Salmonella_phage	47.2	1.9e-33
AVJ78507.1|22709_22910_+	putative NinE-like protein from lambdoid prophage DLP12	NA	G8C7V4	Escherichia_phage	87.5	4.8e-21
AVJ78508.1|22902_23514_+	bacteriophage Lambda NinG family protein	NA	A0A0M4RU10	Salmonella_phage	69.0	3.4e-41
AVJ78509.1|23510_23690_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ78510.1|23686_23803_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ78511.1|23799_24483_+	phage antitermination Q family protein	NA	I6PDF8	Cronobacter_phage	50.4	2.3e-54
AVJ78512.1|24482_24959_+	HNH endonuclease family protein	NA	A0A1I9SEX5	Klebsiella_phage	51.9	6.7e-37
AVJ78513.1|25065_25392_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ78514.1|25735_25891_+|lysis	lysis S family protein	lysis	M9NZI9	Enterobacteria_phage	98.0	3.7e-21
AVJ78515.1|25868_26363_+	lysozyme RrrD	NA	M9P0E5	Enterobacteria_phage	94.5	3.6e-86
AVJ78516.1|26434_26662_+	hypothetical protein	NA	A0A289ZTW9	Serratia_phage	56.0	7.9e-12
AVJ78517.1|26658_27036_+	hypothetical protein	NA	M9NYX9	Enterobacteria_phage	61.0	3.7e-14
AVJ78518.1|27332_27857_+	phage regulatory, Rha family protein	NA	Q38450	Enterobacteria_phage	77.6	4.6e-71
AVJ78519.1|28012_28219_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ78520.1|28222_28873_+	putative dNA repair protein RecN	NA	G8C7P2	Escherichia_phage	97.2	1.9e-111
AVJ78521.1|29013_30438_+|terminase	terminase-like family protein	terminase	G8C7P3	Escherichia_phage	91.6	3.9e-274
AVJ78522.1|30449_31898_+	hypothetical protein	NA	F1C5D7	Cronobacter_phage	50.8	4.3e-119
AVJ78523.1|31929_32823_+|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	F1C5D8	Cronobacter_phage	68.0	1.3e-113
AVJ78524.1|33243_34632_+	hypothetical protein	NA	F1C5D9	Cronobacter_phage	59.0	2.2e-152
AVJ78525.1|34635_35070_+	hypothetical protein	NA	F1C5E0	Cronobacter_phage	72.2	1.4e-49
AVJ78526.1|35080_36178_+|coat	putative phage coat protein	coat	F1C5E1	Cronobacter_phage	77.5	1.7e-160
AVJ78527.1|36187_36553_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ78528.1|36555_36936_+	hypothetical protein	NA	F1C5E2	Cronobacter_phage	55.3	3.1e-29
AVJ78529.1|36935_37421_+	50S ribosomal L13 domain protein	NA	G8GWD9	Rhodobacter_phage	65.2	5.6e-31
AVJ78530.1|37431_37782_+	hypothetical protein	NA	G0ZNE2	Cronobacter_phage	67.0	8.9e-39
AVJ78531.1|37778_37985_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ78532.1|38392_38776_+	hypothetical protein	NA	F1C5E4	Cronobacter_phage	64.6	6.1e-41
AVJ78533.1|38839_39583_+	bacterial Ig-like domain family protein	NA	F1C5E5	Cronobacter_phage	85.4	4.5e-72
AVJ78534.1|39650_39779_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78535.1|39884_40325_+	hypothetical protein	NA	F1C5E8	Cronobacter_phage	59.9	2.6e-43
AVJ78536.1|40383_43866_+	tape measure domain protein	NA	R9TMK1	Aeromonas_phage	60.3	7.9e-252
AVJ78537.1|43868_44363_+	hypothetical protein	NA	F1C5F0	Cronobacter_phage	64.0	2.7e-57
AVJ78538.1|44362_44833_+	hypothetical protein	NA	R9TPR6	Aeromonas_phage	55.2	2.5e-44
AVJ78539.1|45204_47688_+|tail	phage tail family protein	tail	F1C5A7	Cronobacter_phage	59.5	3.8e-285
AVJ78540.1|47745_50004_+	GDSL-like Lipase/Acylhydrolase family protein	NA	W6PEG9	Cronobacter_phage	37.4	2.2e-117
AVJ78541.1|50350_50491_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78542.1|51048_51162_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78543.1|51442_52615_+|integrase	phage integrase family protein	integrase	Q7M297	Enterobacteria_phage	49.5	4.5e-111
AVJ78544.1|52611_52800_-	prophage CP4-57 regulatory family protein	NA	NA	NA	NA	NA
AVJ78545.1|52796_54098_-	SNF2 family N-terminal domain protein	NA	Q3LZN8	Bacteriophage	73.3	4.3e-195
AVJ78546.1|54255_54969_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ78547.1|54961_55231_-	VRR-NUC domain protein	NA	B6SD64	Bacteriophage	65.9	1.0e-26
AVJ78548.1|55230_55425_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78549.1|55417_55636_-	hypothetical protein	NA	NA	NA	NA	NA
55439:55453	attR	ACGCTTTTCGCGCAT	NA	NA	NA	NA
AVJ78550.1|55640_56798_-	DNA polymerase A family protein	NA	B6SD65	Bacteriophage	69.4	8.9e-160
AVJ78551.1|56769_58269_+	hypothetical protein	NA	A0A2H4JCA3	uncultured_Caudovirales_phage	70.9	1.9e-202
AVJ78552.1|58289_60284_+|tail	phage T7 tail fiber family protein	tail	G3M191	Escherichia_virus	44.0	1.6e-108
AVJ78553.1|60312_61446_-	acyltransferase family protein	NA	A0A2H4JA46	uncultured_Caudovirales_phage	28.3	3.8e-22
AVJ78554.1|61463_61631_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ78555.1|61841_62072_+|lysis	lysis S family protein	lysis	A5LH82	Enterobacteria_phage	69.6	3.8e-22
AVJ78556.1|62052_62592_+	phage lysozyme family protein	NA	H6WRZ4	Salmonella_phage	86.5	1.9e-88
AVJ78557.1|62588_62951_+	putative prophage exported protein	NA	R9TPM9	Aeromonas_phage	47.9	7.1e-15
>prophage 2
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	900586	960929	4847226	integrase,tRNA,tail,capsid,portal,head,terminase	Enterobacterial_phage(29.63%)	77	894191:894208	968684:968701
894191:894208	attL	TTTTGTAGGCCGGGTAAG	NA	NA	NA	NA
AVJ79388.1|900586_901699_-|tRNA	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	tRNA	NA	NA	NA	NA
AVJ79389.1|901739_902213_-	phosphatase NudJ	NA	NA	NA	NA	NA
AVJ79390.1|902212_902875_-	pseudouridine synthase family protein	NA	NA	NA	NA	NA
AVJ79391.1|902992_904243_+	isocitrate dehydrogenase, NADP-dependent	NA	Q77Z09	Phage_21	94.4	7.9e-21
AVJ79392.1|904319_904565_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79393.1|904569_906069_-	CSS motif domain associated with EAL family protein	NA	NA	NA	NA	NA
AVJ79394.1|906655_906904_+	transglycosylase associated family protein	NA	NA	NA	NA	NA
AVJ79395.1|907176_908205_-	putative diguanylate cyclase YeaP	NA	G3MA91	Bacillus_virus	32.6	3.8e-13
AVJ79396.1|908456_908585_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79397.1|908631_908772_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79398.1|908852_909158_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79399.1|909158_909503_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79400.1|909652_910360_+	glutamine amidotransferase class-I family protein	NA	NA	NA	NA	NA
AVJ79401.1|910391_911579_-	cyanate transporter family protein	NA	NA	NA	NA	NA
AVJ79402.1|911678_912470_+	helix-turn-helix domain protein	NA	NA	NA	NA	NA
AVJ79403.1|912453_912900_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79404.1|913006_915043_-	glycosyl hydrolases 31 family protein	NA	NA	NA	NA	NA
AVJ79405.1|915058_916390_-	inner membrane symporter YicJ	NA	NA	NA	NA	NA
AVJ79406.1|916656_916779_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ79407.1|916799_917300_-|tRNA	ybaK / prolyl-tRNA synthetases associated domain protein	tRNA	NA	NA	NA	NA
AVJ79408.1|917519_918662_-|integrase	phage integrase family protein	integrase	O21929	Phage_21	49.3	6.4e-94
AVJ79409.1|918935_919205_-	hypothetical protein	NA	M9NZE4	Enterobacteria_phage	88.9	6.5e-13
AVJ79410.1|919208_919385_-	putative yheA protein	NA	A0A2R2X2A8	Escherichia_phage	75.9	2.7e-20
AVJ79411.1|919386_920058_-	ead/Ea22-like family protein	NA	A0A088CC42	Shigella_phage	52.8	1.7e-70
AVJ79412.1|920054_920315_-	putative orf-90	NA	T1S9K2	Salmonella_phage	91.7	3.1e-36
AVJ79413.1|920311_920824_-	hypothetical protein	NA	F1C5B6	Cronobacter_phage	69.6	1.9e-13
AVJ79414.1|920820_921648_-	hypothetical protein	NA	K7PKM7	Enterobacterial_phage	86.7	1.5e-124
AVJ79415.1|921647_921896_-	hypothetical protein	NA	K7PJS4	Enterobacterial_phage	85.2	7.0e-30
AVJ79416.1|922363_922489_-	hypothetical protein	NA	A0A2P1JUD4	Erwinia_phage	69.7	1.2e-06
AVJ79417.1|923278_923905_-	repressor protein C2	NA	K7PM82	Enterobacteria_phage	48.8	1.6e-46
AVJ79418.1|924004_924220_+	putative dicC, repressor of division inhibition protein	NA	NA	NA	NA	NA
AVJ79419.1|924242_924797_+	putative e14 prophage DNA-binding transcriptional regulator	NA	S5FXP0	Shigella_phage	54.2	2.4e-46
AVJ79420.1|925129_926008_+	helix-turn-helix domain protein	NA	U5P0A0	Shigella_phage	80.8	5.4e-40
AVJ79421.1|926004_926499_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79422.1|926498_927158_+	MT-A70 family protein	NA	I6PDF5	Cronobacter_phage	78.9	9.4e-98
AVJ79423.1|927154_927382_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79424.1|927378_927699_+	lexA DNA binding domain protein	NA	K7PHB4	Enterobacterial_phage	77.4	5.5e-43
AVJ79425.1|927875_928085_+	endodeoxyribonuclease RusA family protein	NA	K7PKN5	Enterobacterial_phage	88.4	5.3e-31
AVJ79426.1|928081_929071_+	hypothetical protein	NA	K7PJS6	Enterobacterial_phage	84.2	3.0e-164
AVJ79427.1|929084_929663_+	hypothetical protein	NA	A0A0U2S606	Escherichia_phage	52.8	5.6e-46
AVJ79428.1|930241_930637_+	putative membrane protein	NA	K7PHB9	Enterobacterial_phage	98.5	1.2e-63
AVJ79429.1|930647_930905_+	hypothetical protein	NA	K7PKN9	Enterobacterial_phage	92.9	9.5e-38
AVJ79430.1|930904_931531_+	chitinase class I family protein	NA	K7PJS7	Enterobacterial_phage	95.2	2.4e-111
AVJ79431.1|931538_931814_+	hypothetical protein	NA	K7PGW4	Enterobacterial_phage	93.4	1.5e-12
AVJ79432.1|931806_931989_+	hypothetical protein	NA	K7PM01	Enterobacterial_phage	85.1	3.4e-18
AVJ79433.1|932071_932449_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79434.1|932524_933982_+	putative glycosyl transferase	NA	K7PKP3	Enterobacterial_phage	73.0	2.7e-214
AVJ79435.1|934093_934225_-	hypothetical protein	NA	Q38575	Escherichia_phage	74.4	8.5e-11
AVJ79436.1|934482_935073_+	hypothetical protein	NA	S4TR53	Salmonella_phage	86.2	1.8e-100
AVJ79437.1|935065_935434_+	HNH endonuclease family protein	NA	S4TTG9	Salmonella_phage	91.8	2.8e-59
AVJ79438.1|935539_936034_+|terminase	terminase small subunit	terminase	S4TNN3	Salmonella_phage	98.8	5.4e-82
AVJ79439.1|936033_937692_+	phage Terminase family protein	NA	S4TSQ6	Salmonella_phage	98.6	0.0e+00
AVJ79440.1|937750_939685_+|capsid	phage major capsid protein, HK97 family	capsid	S4TNE3	Salmonella_phage	93.2	0.0e+00
AVJ79441.1|940098_941250_+|portal	phage portal protein, HK97 family	portal	S4TTG7	Salmonella_phage	92.4	5.0e-203
AVJ79442.1|941246_942290_+	carbohydrate binding domain protein	NA	S4TNN1	Salmonella_phage	83.9	1.2e-102
AVJ79443.1|942286_942613_+|head,tail	phage gp6-like head-tail connector family protein	head,tail	S4TSQ3	Salmonella_phage	88.9	2.9e-47
AVJ79444.1|942968_943418_+	hypothetical protein	NA	K7P6X4	Enterobacteria_phage	98.7	1.4e-73
AVJ79445.1|943414_943762_+	hypothetical protein	NA	K7PM93	Enterobacterial_phage	81.6	1.0e-47
AVJ79446.1|943935_944466_+	kilA-N domain protein	NA	B8K1H1	Salmonella_phage	84.0	1.1e-80
AVJ79447.1|944593_945037_+|tail	phage major tail 2 family protein	tail	K7PHL2	Enterobacterial_phage	93.8	4.6e-72
AVJ79448.1|945045_945429_+|tail	phage tail assembly chaperone family protein	tail	K7PKV6	Enterobacterial_phage	93.7	4.4e-63
AVJ79449.1|945509_945716_+	hypothetical protein	NA	Q9MCS5	Enterobacteria_phage	97.1	1.4e-31
AVJ79450.1|945899_946106_+	hypothetical protein	NA	S4TR42	Salmonella_phage	91.2	9.9e-30
AVJ79451.1|946152_949644_+|tail	phage tail tape measure protein, lambda family	tail	A0A2H4JHR1	uncultured_Caudovirales_phage	86.9	0.0e+00
AVJ79452.1|949646_949985_+|tail	phage minor tail family protein	tail	K7PKL8	Enterobacterial_phage	59.8	7.3e-38
AVJ79453.1|949981_950740_+|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	64.0	1.0e-95
AVJ79454.1|950742_951453_+	nlpC/P60 family protein	NA	F1C573	Cronobacter_phage	70.2	1.3e-97
AVJ79455.1|951452_952040_+|tail	bacteriophage lambda tail assembly I family protein	tail	A0A1P8DTG7	Proteus_phage	46.9	3.0e-47
AVJ79456.1|952092_955650_+	hypothetical protein	NA	Q9MCU0	Escherichia_phage	71.8	0.0e+00
AVJ79457.1|955693_956008_+	hypothetical protein	NA	A0A2P0WA17	Enterobacter_phage	64.7	1.5e-32
AVJ79458.1|956008_956680_+	hypothetical protein	NA	A0A2P0WA07	Enterobacter_phage	73.1	2.6e-87
AVJ79459.1|956787_957021_+	putative conversion resistant protein Cor	NA	E4WL42	Enterobacteria_phage	78.9	3.9e-30
AVJ79460.1|957079_958363_+|tail	putative tail fiber	tail	K7PHF0	Enterobacteria_phage	63.3	6.2e-146
AVJ79461.1|958456_958723_-	dinI-like family protein	NA	K7PKR6	Enterobacteria_phage	94.3	1.8e-39
AVJ79462.1|959253_959382_+	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	65.9	8.6e-08
AVJ79463.1|959344_959458_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79464.1|959645_960929_-	hypothetical protein	NA	A0A140HLI1	Bacillus_phage	28.3	1.1e-09
968684:968701	attR	CTTACCCGGCCTACAAAA	NA	NA	NA	NA
>prophage 3
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	1214585	1239380	4847226		Escherichia_phage(33.33%)	28	NA	NA
AVJ79721.1|1214585_1215245_+	chloramphenicol acetyltransferase	NA	G3CFL0	Escherichia_phage	62.6	8.3e-78
AVJ79722.1|1215301_1215613_-	yebG family protein	NA	NA	NA	NA	NA
AVJ79723.1|1215721_1216336_-	tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	33.7	1.6e-27
AVJ79724.1|1216381_1217236_-	DMSO reductase anchor subunit family protein	NA	A0A077SK59	Escherichia_phage	34.9	2.0e-23
AVJ79725.1|1217237_1217855_-	dimethylsulfoxide reductase, chain B	NA	A0A077SL61	Escherichia_phage	59.1	1.0e-74
AVJ79726.1|1217865_1218033_-	anaerobic dimethyl sulfoxide reductase chain A domain protein	NA	A0A077SK27	Escherichia_phage	69.1	1.4e-13
AVJ79727.1|1218020_1220291_-	anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein	NA	A0A077SK27	Escherichia_phage	48.2	2.2e-186
AVJ79728.1|1220421_1220727_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79729.1|1220829_1221684_-	glycosyltransferase 17 family protein	NA	M1I711	Paramecium_bursaria_Chlorella_virus	32.5	2.4e-24
AVJ79730.1|1221876_1222587_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79731.1|1222604_1223165_-	spermidine N(1)-acetyltransferase	NA	NA	NA	NA	NA
AVJ79732.1|1223164_1223503_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79733.1|1223653_1223980_+	hypothetical protein	NA	A0A218MNG8	uncultured_virus	54.5	1.6e-21
AVJ79734.1|1224091_1225306_+	mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein	NA	Q6A202	Oenococcus_phage	29.7	2.2e-47
AVJ79735.1|1225320_1226340_+	zinc-binding dehydrogenase family protein	NA	NA	NA	NA	NA
AVJ79736.1|1226413_1227793_+	sugar (and other) transporter family protein	NA	NA	NA	NA	NA
AVJ79737.1|1228016_1229480_+	mannitol dehydrogenase Rossmann domain protein	NA	H8ZJP8	Ostreococcus_tauri_virus	30.3	1.9e-45
AVJ79738.1|1229524_1229728_-	putative selenoprotein YdfZ	NA	J9Q802	Salmonella_phage	56.7	4.4e-14
AVJ79739.1|1230015_1230447_+	universal stress protein G	NA	A0A1W6JNV4	Morganella_phage	35.2	1.5e-16
AVJ79740.1|1230481_1231168_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79741.1|1231258_1232005_-	NADP-dependent 3-hydroxy acid dehydrogenase YdfG	NA	NA	NA	NA	NA
AVJ79742.1|1232148_1234182_+	peptidyl-dipeptidase dcp	NA	A0A1V0SIU1	Klosneuvirus	22.4	3.8e-20
AVJ79743.1|1235585_1235804_-	cold shock protein CspA	NA	A0A1W6JNX5	Morganella_phage	62.7	8.3e-19
AVJ79744.1|1236171_1236861_-	hypothetical protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.5	1.7e-81
AVJ79745.1|1237124_1237364_-	dinI-like family protein	NA	K7PKM2	Enterobacterial_phage	91.1	1.5e-32
AVJ79746.1|1237690_1238110_+	protein UmuD	NA	A0A1W6JNS2	Morganella_phage	56.7	7.2e-35
AVJ79747.1|1238140_1238263_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79748.1|1238261_1239380_+	IMS HHH motif family protein	NA	I6RSM4	Salmonella_phage	90.9	1.2e-198
>prophage 4
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	1411555	1436166	4847226	integrase,transposase	Shigella_phage(42.86%)	25	1408798:1408812	1440421:1440434
1408798:1408812	attL	GGCTTTCCGGGTCAA	NA	NA	NA	NA
AVJ79898.1|1411555_1412479_-|transposase	transposase DDE domain protein	transposase	Q1MVF0	Enterobacteria_phage	98.7	4.6e-175
1408798:1408812	attL	GGCTTTCCGGGTCAA	NA	NA	NA	NA
AVJ79899.1|1412598_1413231_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79900.1|1413259_1414663_-|integrase	integrase core domain protein	integrase	NA	NA	NA	NA
AVJ79901.1|1414847_1416305_+|integrase	phage integrase family protein	integrase	NA	NA	NA	NA
AVJ79902.1|1416294_1417845_+|integrase	phage integrase family protein	integrase	NA	NA	NA	NA
AVJ79903.1|1417841_1420205_+	hypothetical protein	NA	NA	NA	NA	NA
1418397:1418411	attR	TTGACCCGGAAAGCC	NA	NA	NA	NA
AVJ79904.1|1420204_1420648_+	hypothetical protein	NA	NA	NA	NA	NA
1418397:1418411	attR	TTGACCCGGAAAGCC	NA	NA	NA	NA
AVJ79905.1|1420845_1421007_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79906.1|1421275_1421836_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79907.1|1422921_1423980_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79908.1|1424001_1424115_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79909.1|1424418_1425423_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AVJ79910.1|1426153_1426441_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79911.1|1426592_1426748_-	putative orf86	NA	NA	NA	NA	NA
AVJ79912.1|1427185_1427398_+|transposase	transposase family protein	transposase	NA	NA	NA	NA
AVJ79913.1|1427439_1427865_+	HTH-like domain protein	NA	NA	NA	NA	NA
AVJ79914.1|1428161_1428275_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ79915.1|1428471_1429980_+	group II intron, maturase-specific domain protein	NA	A0A0U4J920	Pseudomonas_phage	31.8	3.6e-44
AVJ79916.1|1430102_1430519_+|integrase	integrase core domain protein	integrase	U5P429	Shigella_phage	59.0	6.0e-42
AVJ79917.1|1430619_1431270_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ79918.1|1431272_1432925_-	recF/RecN/SMC N terminal domain protein	NA	C7BGE8	Burkholderia_phage	30.2	1.9e-09
AVJ79919.1|1432921_1433857_-	reverse transcriptase family protein	NA	Q7M2A9	Enterobacteria_phage	29.9	2.9e-28
AVJ79920.1|1435018_1435297_+|transposase	transposase family protein	transposase	U5P4I9	Shigella_phage	93.8	1.5e-33
AVJ79921.1|1435312_1435429_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ79922.1|1435551_1436166_+	DDE domain protein	NA	U5P429	Shigella_phage	93.6	1.6e-107
1440421:1440434	attR	GTTCATCACGCTCT	NA	NA	NA	NA
>prophage 5
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	1648987	1683895	4847226	integrase,tRNA,capsid,transposase,protease	Acinetobacter_phage(28.57%)	38	1683286:1683304	1685948:1685966
AVJ80126.1|1648987_1650004_-|protease	putative protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	28.7	3.5e-19
AVJ80127.1|1650110_1650227_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80128.1|1650286_1651048_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80129.1|1651044_1651635_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
AVJ80130.1|1651670_1652546_-	pseudouridine synthase family protein	NA	NA	NA	NA	NA
AVJ80131.1|1652646_1654332_+|integrase	phage integrase family protein	integrase	NA	NA	NA	NA
AVJ80132.1|1654552_1655224_+	EAL domain protein	NA	NA	NA	NA	NA
AVJ80133.1|1655266_1657132_-	hypothetical protein	NA	A0A1D7XFE4	Escherichia_phage	32.3	5.1e-64
AVJ80134.1|1657124_1657322_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80135.1|1657455_1658391_-|capsid	phage major capsid E family protein	capsid	NA	NA	NA	NA
AVJ80136.1|1658503_1658866_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80137.1|1658862_1659084_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80138.1|1659719_1660061_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80139.1|1660053_1660437_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80140.1|1660659_1660812_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80141.1|1660849_1661668_-|transposase	transposase C of IS166 homeodomain protein	transposase	NA	NA	NA	NA
AVJ80142.1|1661917_1662073_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80143.1|1662512_1662758_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80144.1|1663932_1664511_+|integrase	phage integrase family protein	integrase	A0A1B1P7Y2	Bacillus_phage	28.1	2.0e-11
AVJ80145.1|1664711_1665917_+	glycosyl transferase 2 family protein	NA	A0A0F7L2F7	uncultured_marine_virus	33.3	8.2e-07
AVJ80146.1|1666306_1666927_-|tRNA	tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family	tRNA	NA	NA	NA	NA
AVJ80147.1|1666923_1667805_-	PHP domain protein	NA	NA	NA	NA	NA
AVJ80148.1|1668083_1669646_+	anthranilate synthase component I	NA	NA	NA	NA	NA
AVJ80149.1|1669645_1671241_+	anthranilate synthase component II	NA	A0A0N7IRD9	Acinetobacter_phage	37.0	8.0e-50
AVJ80150.1|1671244_1672603_+	indole-3-glycerol phosphate synthase family protein	NA	A0A0P0IR83	Acinetobacter_phage	41.0	6.6e-37
AVJ80151.1|1672613_1673807_+	tryptophan synthase, beta subunit	NA	NA	NA	NA	NA
AVJ80152.1|1673806_1674616_+	tryptophan synthase, alpha subunit	NA	NA	NA	NA	NA
AVJ80153.1|1674790_1676002_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80154.1|1675998_1676232_+	sirA-like family protein	NA	NA	NA	NA	NA
AVJ80155.1|1676518_1677151_-	outer membrane protein W	NA	NA	NA	NA	NA
AVJ80156.1|1677863_1678607_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80157.1|1678620_1679160_+	intracellular septation protein A	NA	NA	NA	NA	NA
AVJ80158.1|1679243_1679387_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80159.1|1679340_1681527_+	tonB-dependent siderophore receptor family protein	NA	NA	NA	NA	NA
AVJ80160.1|1681624_1682020_+	thioesterase superfamily protein	NA	NA	NA	NA	NA
AVJ80161.1|1682058_1682763_-	tonB family C-terminal domain protein	NA	NA	NA	NA	NA
AVJ80162.1|1682984_1683281_+	protein YciI	NA	NA	NA	NA	NA
1683286:1683304	attL	AAAGGCTCCCTCGGGAGCC	NA	NA	NA	NA
AVJ80163.1|1683607_1683895_+|integrase	integrase core domain protein	integrase	U5P429	Shigella_phage	89.2	8.4e-35
AVJ80163.1|1683607_1683895_+|integrase	integrase core domain protein	integrase	U5P429	Shigella_phage	89.2	8.4e-35
1685948:1685966	attR	AAAGGCTCCCTCGGGAGCC	NA	NA	NA	NA
>prophage 6
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	2305464	2382753	4847226	plate,integrase,tRNA,tail,head,protease,terminase	Burkholderia_virus(45.24%)	88	2357862:2357878	2377132:2377148
AVJ80748.1|2305464_2306277_-|tRNA	tRNA pseudouridine(38-40) synthase	tRNA	NA	NA	NA	NA
AVJ80749.1|2306276_2307290_-	semialdehyde dehydrogenase, dimerization domain protein	NA	NA	NA	NA	NA
AVJ80750.1|2307357_2308494_-	hypothetical protein	NA	A0A2R8FDS8	Brazilian_cedratvirus	27.3	1.8e-19
AVJ80751.1|2308605_2309610_+	flagellar regulator flk	NA	NA	NA	NA	NA
AVJ80752.1|2309694_2310873_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80753.1|2310941_2312159_-	3-oxoacyl-[acyl-carrier-protein] synthase 1	NA	NA	NA	NA	NA
AVJ80754.1|2312317_2314315_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC	tRNA	NA	NA	NA	NA
AVJ80755.1|2314380_2314656_-	yfcL family protein	NA	NA	NA	NA	NA
AVJ80756.1|2314669_2315215_-	elongation factor P hydroxylase	NA	NA	NA	NA	NA
AVJ80757.1|2315214_2316024_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AVJ80758.1|2316023_2316848_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AVJ80759.1|2316850_2317936_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	46.6	2.5e-87
AVJ80760.1|2317996_2318929_-	protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific	NA	NA	NA	NA	NA
AVJ80761.1|2319074_2319626_+	smr domain protein	NA	NA	NA	NA	NA
AVJ80762.1|2319672_2320158_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
AVJ80763.1|2320367_2322515_-	fatty oxidation complex, alpha subunit FadJ	NA	NA	NA	NA	NA
AVJ80764.1|2322514_2323825_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
AVJ80765.1|2324062_2324347_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80766.1|2324719_2326003_+	outer membrane transport family protein	NA	NA	NA	NA	NA
AVJ80767.1|2326047_2326800_-	putative phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
AVJ80768.1|2327115_2328045_+	inner membrane protein YfdC	NA	E7DYY8	Enterobacteria_phage	83.6	4.8e-140
AVJ80769.1|2328545_2329361_+	lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein	NA	A0A1W6JP29	Morganella_phage	54.3	1.6e-75
AVJ80770.1|2329419_2329554_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80771.1|2329850_2331086_-	glutamate-pyruvate aminotransferase AlaC	NA	NA	NA	NA	NA
AVJ80772.1|2331472_2333170_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80773.1|2333183_2333915_+	response regulator	NA	A0A2R2ZGH8	Clostridioides_phage	25.1	1.1e-14
AVJ80774.1|2333950_2334916_-	glucokinase	NA	NA	NA	NA	NA
AVJ80775.1|2335121_2336357_+	voltage gated chloride channel family protein	NA	NA	NA	NA	NA
AVJ80776.1|2336357_2338013_-	indolepyruvate decarboxylase	NA	NA	NA	NA	NA
AVJ80777.1|2338199_2338745_+	aldo/keto reductase family protein	NA	NA	NA	NA	NA
AVJ80778.1|2338714_2339296_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	70.9	7.1e-65
AVJ80779.1|2339473_2339896_-|tail	caudovirales tail fiber assembly family protein	tail	A0A1B0V844	Salmonella_phage	50.0	5.0e-28
AVJ80780.1|2339898_2341485_-|tail	putative tail fiber	tail	A0A1B0V7G4	Salmonella_phage	53.4	1.3e-140
AVJ80781.1|2341487_2342066_-|tail	phage tail protein I	tail	A4JWL7	Burkholderia_virus	66.3	7.5e-67
AVJ80782.1|2342058_2343162_-|plate	baseplate J-like family protein	plate	A4JWL6	Burkholderia_virus	54.0	4.9e-107
AVJ80783.1|2343152_2343500_-	lysozyme family protein	NA	Q6QIA0	Burkholderia_phage	63.3	7.8e-35
AVJ80784.1|2343554_2344067_-|plate	phage baseplate assembly V family protein	plate	A4JWL4	Burkholderia_virus	37.8	1.8e-19
AVJ80785.1|2344066_2345236_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	48.7	3.9e-86
AVJ80786.1|2345223_2345436_-	phage Tail Protein X family protein	NA	Q6QIA3	Burkholderia_phage	57.1	1.5e-17
AVJ80787.1|2345435_2346320_-	phage P2 GpU family protein	NA	A4JWL1	Burkholderia_virus	45.4	5.6e-53
AVJ80788.1|2346319_2349160_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A4JWL0	Burkholderia_virus	45.4	2.0e-168
AVJ80789.1|2349252_2349390_-	phage P2 GpE family protein	NA	NA	NA	NA	NA
AVJ80790.1|2349355_2349676_-	mu-like prophage FluMu gp41 family protein	NA	NA	NA	NA	NA
AVJ80791.1|2349774_2350056_-	hypothetical protein	NA	A5VWB2	Enterobacteria_phage	43.3	1.4e-13
AVJ80792.1|2350058_2350580_-|tail	phage major tail tube protein	tail	A4JWK6	Burkholderia_virus	68.2	2.3e-67
AVJ80793.1|2350579_2352007_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	77.8	1.6e-214
AVJ80794.1|2351996_2352248_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80795.1|2352247_2352712_-	gp37 family protein	NA	Q6QIB2	Burkholderia_phage	52.3	3.7e-40
AVJ80796.1|2352711_2353158_-	hypothetical protein	NA	A4JWK2	Burkholderia_virus	51.7	7.9e-32
AVJ80797.1|2353159_2353516_-	putative dihydrolipoamide acyltransferase	NA	NA	NA	NA	NA
AVJ80798.1|2353526_2354480_-	hypothetical protein	NA	A4JWK0	Burkholderia_virus	42.3	7.1e-62
AVJ80799.1|2354493_2355591_-|protease	putative protease	protease	A4JWJ9	Burkholderia_virus	50.5	3.5e-97
AVJ80800.1|2355795_2356254_-	phage virion morphogenesis protein	NA	Q6QIB8	Burkholderia_phage	40.1	3.0e-26
AVJ80801.1|2356256_2357078_-|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	A4JWJ6	Burkholderia_virus	61.2	2.2e-96
AVJ80802.1|2357058_2358558_-	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	60.7	2.2e-171
2357862:2357878	attL	CCGTACCGCGTGGATGC	NA	NA	NA	NA
AVJ80803.1|2358557_2360153_-|terminase	terminase-like family protein	terminase	A4JWJ4	Burkholderia_virus	61.8	6.7e-182
AVJ80804.1|2360149_2360695_-	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.0	2.3e-57
AVJ80805.1|2360694_2361006_-	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	3.6e-31
AVJ80806.1|2360998_2361331_-	putative phage membrane protein	NA	Q6QIC4	Burkholderia_phage	46.7	4.1e-17
AVJ80807.1|2361327_2361981_-	putative lipoprotein	NA	A0A0S4L1H0	Pseudomonas_phage	33.7	1.2e-09
AVJ80808.1|2361970_2362693_-	transglycosylase SLT domain protein	NA	Q5ZQZ1	Pseudomonas_phage	58.2	7.0e-62
AVJ80809.1|2362695_2363046_-	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	2.6e-22
AVJ80810.1|2363225_2363483_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80811.1|2363503_2364064_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80812.1|2364312_2365083_+	DNA adenine methylase family protein	NA	A2I2Y7	Vibrio_virus	65.3	1.0e-98
AVJ80813.1|2365146_2365344_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80814.1|2365622_2365766_-	putative phage repressor protein	NA	NA	NA	NA	NA
AVJ80815.1|2366128_2366353_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80816.1|2366349_2366655_+	winged helix-turn-helix DNA-binding family protein	NA	Q5ZR02	Pseudomonas_phage	58.0	7.1e-24
AVJ80817.1|2366664_2367573_+	hypothetical protein	NA	A4JWN3	Burkholderia_virus	55.4	6.3e-76
AVJ80818.1|2367576_2369346_+|integrase	integrase core domain protein	integrase	Q6QIE0	Burkholderia_phage	68.5	2.4e-228
AVJ80819.1|2369356_2370523_+	molybdopterin guanine dinucleotide synthesis B family protein	NA	A4JWN1	Burkholderia_virus	60.9	5.7e-122
AVJ80820.1|2370525_2370795_+	putative prophage exported protein	NA	NA	NA	NA	NA
AVJ80821.1|2370812_2371424_+	hypothetical protein	NA	A0A2D1GNM4	Pseudomonas_phage	69.2	2.1e-75
AVJ80822.1|2371501_2371690_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80823.1|2371686_2371983_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80824.1|2371969_2372656_+	hypothetical protein	NA	A0A1W6DYA0	Aeromonas_phage	35.2	4.8e-28
AVJ80825.1|2372655_2372868_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ80826.1|2372860_2373286_+	hypothetical protein	NA	A4JWM5	Burkholderia_virus	45.9	1.8e-25
AVJ80827.1|2373282_2373672_+	mor transcription activator family protein	NA	A4JWM4	Burkholderia_virus	53.4	1.4e-29
AVJ80828.1|2373849_2374401_+	aldo/keto reductase family protein	NA	NA	NA	NA	NA
AVJ80829.1|2374527_2374875_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80830.1|2374908_2376084_-	divalent metal cation transporter MntH	NA	NA	NA	NA	NA
AVJ80831.1|2376492_2377680_+	nucleoside permease NupC	NA	NA	NA	NA	NA
2377132:2377148	attR	CCGTACCGCGTGGATGC	NA	NA	NA	NA
AVJ80832.1|2377725_2379915_-	GGDEF domain protein	NA	NA	NA	NA	NA
AVJ80833.1|2380535_2380898_+	helix-turn-helix family protein	NA	NA	NA	NA	NA
AVJ80834.1|2380920_2381286_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80835.1|2381337_2382753_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 7
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	2540651	2621465	4847226	integrase,tRNA,tail,capsid,transposase,portal,head,terminase	Escherichia_phage(18.6%)	88	2543619:2543635	2627801:2627817
AVJ80978.1|2540651_2541389_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
AVJ80979.1|2541521_2542850_+	ATP-dependent RNA helicase SrmB	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.5	4.7e-48
AVJ80980.1|2542902_2543286_-	autonomous glycyl radical cofactor GrcA	NA	A0A193GZ98	Escherichia_phage	70.9	1.4e-32
AVJ80981.1|2543600_2544290_+	uracil-DNA glycosylase	NA	A0A076JX67	Equid_alphaherpesvirus	48.8	7.9e-55
2543619:2543635	attL	TGGCATGACGTGCTGGC	NA	NA	NA	NA
AVJ80982.1|2544329_2545415_-	RNA 2'-O ribose methyltransferase substrate binding family protein	NA	NA	NA	NA	NA
AVJ80983.1|2545619_2546039_+	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	37.2	1.2e-13
AVJ80984.1|2546109_2546808_+	DTW domain protein	NA	NA	NA	NA	NA
AVJ80985.1|2546843_2549507_+	acetyltransferase family protein	NA	NA	NA	NA	NA
AVJ80986.1|2549616_2550972_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AVJ80987.1|2551201_2551342_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ80988.1|2551338_2552646_-	alpha-ketoglutarate permease	NA	Q6JIH2	Burkholderia_virus	29.4	2.0e-43
AVJ80989.1|2552797_2553151_-	hypothetical protein	NA	A0A0C5AAP9	Cyanophage	47.8	3.3e-25
AVJ80990.1|2558781_2561355_-	ATP-dependent chaperone protein ClpB	NA	H6X3M6	Enterobacteria_phage	35.4	5.8e-127
AVJ80991.1|2561484_2562216_-	multi-copper polyphenol oxidoreductase laccase family protein	NA	NA	NA	NA	NA
AVJ80992.1|2562212_2563193_-	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA	NA
AVJ80993.1|2563324_2564062_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AVJ80994.1|2564356_2564671_+	ribosome-associated inhibitor A	NA	NA	NA	NA	NA
AVJ80995.1|2564930_2566091_+	P-protein	NA	NA	NA	NA	NA
AVJ80996.1|2566087_2566960_-	SMP-30/Gluconolaconase/LRE-like region family protein	NA	NA	NA	NA	NA
AVJ80997.1|2567104_2567308_-	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	56.2	1.1e-12
AVJ80998.1|2567304_2567442_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ80999.1|2567819_2568491_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81000.1|2568580_2568919_-	putative aminotransferase domain protein	NA	Q858T3	Yersinia_virus	58.9	4.2e-09
AVJ81001.1|2569097_2569595_+|integrase	phage integrase family protein	integrase	S4TP66	Salmonella_phage	72.1	2.8e-62
AVJ81002.1|2569780_2570902_-	T-protein	NA	NA	NA	NA	NA
AVJ81003.1|2570912_2571983_-	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.5	4.5e-89
AVJ81004.1|2572382_2572565_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81005.1|2572524_2572998_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81006.1|2573074_2574211_+	putative diguanylate cyclase YfiN	NA	A0A2K8I9Y5	Pseudomonas_phage	39.8	1.1e-05
AVJ81007.1|2574223_2574706_+	ompA family protein	NA	NA	NA	NA	NA
AVJ81008.1|2574708_2576079_-	pepSY-associated TM helix family protein	NA	NA	NA	NA	NA
AVJ81009.1|2576117_2576522_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81010.1|2576654_2577002_-	ribosomal protein L19	NA	NA	NA	NA	NA
AVJ81011.1|2577045_2577813_-|tRNA	tRNA (guanine(37)-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AVJ81012.1|2577844_2578381_-	16S rRNA processing protein RimM	NA	NA	NA	NA	NA
AVJ81013.1|2578399_2578648_-	ribosomal protein S16	NA	NA	NA	NA	NA
AVJ81014.1|2578764_2580126_-	signal recognition particle protein	NA	NA	NA	NA	NA
AVJ81015.1|2580292_2581084_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
AVJ81016.1|2581148_2582390_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81017.1|2582442_2583036_-	protein GrpE	NA	NA	NA	NA	NA
AVJ81018.1|2583028_2583145_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81019.1|2583158_2584037_+	ATP-NAD kinase family protein	NA	NA	NA	NA	NA
AVJ81020.1|2584122_2585784_+	DNA repair protein RecN	NA	NA	NA	NA	NA
AVJ81021.1|2585922_2586261_+	smpA / OmlA family protein	NA	NA	NA	NA	NA
AVJ81022.1|2586322_2586610_-	persistence and stress-resistance antitoxin PasI	NA	NA	NA	NA	NA
AVJ81023.1|2586599_2587037_-	persistence and stress-resistance toxin PasT	NA	NA	NA	NA	NA
AVJ81024.1|2587193_2587676_+	ssrA-binding protein	NA	W5RAM5	Staphylococcus_phage	46.8	6.8e-29
AVJ81025.1|2588609_2589485_-	helix-turn-helix domain protein	NA	A0A077SL42	Escherichia_phage	45.8	1.3e-65
AVJ81026.1|2589685_2591410_-	bacterial flagellin C-terminal helical region family protein	NA	NA	NA	NA	NA
AVJ81027.1|2592613_2592766_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81028.1|2593111_2593897_-|tail	putative tail fiber domain protein	tail	K7PH95	Enterobacterial_phage	84.2	9.7e-126
AVJ81029.1|2593905_2595144_-|head	putative head binding protein	head	A0A1V0E5M2	Salmonella_phage	65.2	2.5e-152
AVJ81030.1|2595205_2596174_-	hypothetical protein	NA	G1CSU0	Cronobacter_virus	41.1	1.3e-55
AVJ81031.1|2596177_2597785_-	hypothetical protein	NA	S4TTF5	Salmonella_phage	68.9	3.7e-212
AVJ81032.1|2597831_2599058_-|capsid	phage major capsid protein, HK97 family	capsid	K7PM57	Enterobacteria_phage	87.2	2.3e-129
AVJ81033.1|2599071_2600376_-|portal	phage portal protein, HK97 family	portal	K7PJU5	Enterobacteria_phage	93.8	8.1e-234
AVJ81034.1|2600375_2602112_-	phage Terminase family protein	NA	K7PKT2	Enterobacteria_phage	99.7	0.0e+00
AVJ81035.1|2602111_2602432_-|terminase	phage terminase, small subunit, P27 family	terminase	K7PHI2	Enterobacteria_phage	99.1	2.6e-53
AVJ81036.1|2602901_2603030_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ81037.1|2603092_2603680_-	putative glycosyl transferase	NA	S4TR53	Salmonella_phage	84.5	7.8e-96
AVJ81038.1|2603848_2604106_+	hypothetical protein	NA	K7P7V5	Enterobacteria_phage	95.1	2.7e-32
AVJ81039.1|2604406_2605360_-	hypothetical protein	NA	S4TSQ9	Salmonella_phage	92.1	4.3e-176
AVJ81040.1|2605406_2606261_-	DDE domain protein	NA	U5P429	Shigella_phage	41.9	8.0e-49
AVJ81041.1|2606257_2606557_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AVJ81042.1|2606601_2607111_-	glycosyl transferase domain protein	NA	K7PKP3	Enterobacterial_phage	96.3	2.6e-87
AVJ81043.1|2607301_2607592_+	lipoprotein bor	NA	C6ZCX3	Enterobacteria_phage	62.9	6.3e-30
AVJ81044.1|2607702_2607987_-	hypothetical protein	NA	G8C7W3	Escherichia_phage	67.0	1.1e-26
AVJ81045.1|2608053_2608266_-	hypothetical protein	NA	K7PM01	Enterobacterial_phage	83.7	2.4e-15
AVJ81046.1|2608273_2608423_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81047.1|2608718_2608838_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81048.1|2608903_2609173_-	hypothetical protein	NA	G8C7W1	Escherichia_phage	90.8	4.8e-32
AVJ81049.1|2609180_2609810_-	chitinase class I family protein	NA	G8C7W0	Escherichia_phage	97.6	1.4e-114
AVJ81050.1|2609809_2610088_-	hypothetical protein	NA	G8C7V9	Escherichia_phage	87.4	9.6e-36
AVJ81051.1|2610077_2610467_-	putative membrane protein	NA	G8C7V8	Escherichia_phage	93.8	8.7e-59
AVJ81052.1|2610821_2611163_-	HNH endonuclease family protein	NA	C4ML56	Xanthomonas_virus	45.8	7.4e-14
AVJ81053.1|2611601_2612384_-	antitermination family protein	NA	F1C595	Cronobacter_phage	79.1	9.4e-113
AVJ81054.1|2612380_2612692_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81055.1|2612693_2614565_-	AAA domain protein	NA	K7PK08	Enterobacteria_phage	61.3	4.5e-230
AVJ81056.1|2614668_2615691_-	replication domain protein	NA	V5URT9	Shigella_phage	55.6	4.0e-47
AVJ81057.1|2615683_2615854_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81058.1|2616651_2616930_+	peptidase S24-like family protein	NA	G8C7U1	Escherichia_phage	71.7	1.5e-33
AVJ81059.1|2617131_2617563_+	helix-turn-helix domain protein	NA	NA	NA	NA	NA
AVJ81060.1|2617629_2618016_+	peptidase S24-like family protein	NA	F1C5A0	Cronobacter_phage	60.5	2.2e-38
AVJ81061.1|2618155_2618347_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81062.1|2618339_2618747_+	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	87.5	2.1e-47
AVJ81063.1|2619301_2619724_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	66.4	1.6e-45
AVJ81064.1|2619890_2620139_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81065.1|2620421_2621465_+|integrase	phage integrase family protein	integrase	I6PDJ1	Cronobacter_phage	90.2	1.8e-180
2627801:2627817	attR	GCCAGCACGTCATGCCA	NA	NA	NA	NA
>prophage 8
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	3018907	3051150	4847226	integrase,transposase	Shigella_phage(44.44%)	36	3007701:3007716	3057173:3057188
3007701:3007716	attL	TTCCAGCTCGTTCTGC	NA	NA	NA	NA
AVJ81448.1|3018907_3019207_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AVJ81449.1|3019251_3019740_-	KAP family P-loop domain protein	NA	NA	NA	NA	NA
AVJ81450.1|3020105_3020312_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81451.1|3020356_3020485_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81452.1|3020598_3020895_+	helix-turn-helix family protein	NA	NA	NA	NA	NA
AVJ81453.1|3021318_3021975_+	bacterial regulatory, tetR family protein	NA	NA	NA	NA	NA
AVJ81454.1|3022037_3023021_-	quinone oxidoreductase, YhdH/YhfP family protein	NA	NA	NA	NA	NA
AVJ81455.1|3023472_3023697_+	insA N-terminal domain protein	NA	A0A2L1IV22	Escherichia_phage	97.3	2.0e-36
AVJ81456.1|3023825_3024119_+|transposase	putative transposase	transposase	U5P0U6	Shigella_phage	89.7	1.6e-44
AVJ81457.1|3024265_3024412_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81458.1|3024388_3024508_+	transcriptional repressor FrmR	NA	NA	NA	NA	NA
AVJ81459.1|3024542_3025652_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	28.7	2.2e-30
AVJ81460.1|3025695_3026094_+	glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein	NA	NA	NA	NA	NA
AVJ81461.1|3026158_3026995_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AVJ81462.1|3027273_3027609_-|integrase	integrase core domain protein	integrase	U5P429	Shigella_phage	61.1	6.3e-34
AVJ81463.1|3027731_3029240_-	group II intron, maturase-specific domain protein	NA	A0A0U4J920	Pseudomonas_phage	31.8	3.6e-44
AVJ81464.1|3029436_3029550_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81465.1|3031214_3033866_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	34.1	5.4e-152
AVJ81466.1|3033880_3034183_-|transposase	transposase IS66 family protein	transposase	A0A0P0ZEB3	Stx2-converting_phage	72.0	9.2e-24
AVJ81467.1|3034806_3035940_-	alcohol dehydrogenase GroES-associated family protein	NA	NA	NA	NA	NA
AVJ81468.1|3036534_3036651_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81469.1|3037088_3037670_+	lysR substrate binding domain protein	NA	NA	NA	NA	NA
AVJ81470.1|3037783_3038443_-	3-beta hydroxysteroid dehydrogenase/isomerase family protein	NA	NA	NA	NA	NA
AVJ81471.1|3038737_3039574_-	helix-turn-helix domain protein	NA	NA	NA	NA	NA
AVJ81472.1|3039649_3040501_-	multidrug resistance efflux transporter family protein	NA	NA	NA	NA	NA
AVJ81473.1|3040607_3041483_-	metallo-beta-lactamase superfamily protein	NA	NA	NA	NA	NA
AVJ81474.1|3041565_3042360_-	lysR substrate binding domain protein	NA	NA	NA	NA	NA
AVJ81475.1|3042639_3042759_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81476.1|3042758_3043883_+	flavin oxidoreductase / NADH oxidase family protein	NA	NA	NA	NA	NA
AVJ81477.1|3043978_3044287_+	helix-turn-helix domain protein	NA	NA	NA	NA	NA
AVJ81478.1|3044818_3045187_-	HTH-like domain protein	NA	U5P429	Shigella_phage	82.2	1.4e-53
AVJ81479.1|3045243_3045522_-|transposase	transposase family protein	transposase	U5P4I9	Shigella_phage	93.8	1.2e-33
AVJ81480.1|3045612_3046041_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81481.1|3046044_3048123_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81482.1|3048149_3049916_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81483.1|3049902_3051150_-|integrase	phage integrase family protein	integrase	NA	NA	NA	NA
3057173:3057188	attR	TTCCAGCTCGTTCTGC	NA	NA	NA	NA
>prophage 9
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	3110563	3161134	4847226	plate,lysis,tRNA,tail,capsid,integrase,transposase,portal,head,terminase	Salmonella_phage(80.43%)	63	3116651:3116700	3151496:3151545
AVJ81540.1|3110563_3111577_-|tRNA	tRNA threonylcarbamoyl adenosine modification protein YgjD	tRNA	A0A0R6PI74	Moraxella_phage	58.6	5.3e-108
AVJ81541.1|3111813_3112029_+	ribosomal protein S21	NA	NA	NA	NA	NA
AVJ81542.1|3112144_3113890_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	39.0	1.4e-76
AVJ81543.1|3114043_3115888_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
AVJ81544.1|3115990_3116497_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
3116651:3116700	attL	GACTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAAAT	NA	NA	NA	NA
AVJ81545.1|3116881_3116995_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81546.1|3117121_3118222_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	92.3	1.1e-183
AVJ81547.1|3118218_3118698_-	phage P2 GpU family protein	NA	E5G6Q2	Salmonella_phage	95.3	5.5e-63
AVJ81548.1|3118703_3122237_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A1S6L010	Salmonella_phage	68.6	0.0e+00
AVJ81549.1|3122229_3122349_-	phage P2 GpE family protein	NA	E5G6Q0	Salmonella_phage	92.3	3.3e-14
AVJ81550.1|3122363_3122666_-	mu-like prophage FluMu gp41 family protein	NA	A0A1S6KZZ9	Salmonella_phage	91.0	3.7e-41
AVJ81551.1|3122720_3123236_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	93.0	7.6e-87
AVJ81552.1|3123245_3124418_-|tail	phage tail sheath family protein	tail	A0A1S6KZY7	Salmonella_phage	93.6	6.6e-211
AVJ81553.1|3124551_3124974_-|tail	caudovirales tail fiber assembly family protein	tail	A0A1B0V844	Salmonella_phage	51.5	3.8e-28
AVJ81554.1|3124976_3127223_-|tail	phage tail-collar fiber family protein	tail	A0A1B0V7G4	Salmonella_phage	54.9	2.3e-164
AVJ81555.1|3127219_3127825_-|tail	phage tail protein I	tail	E5G6N9	Salmonella_phage	94.0	3.1e-111
AVJ81556.1|3127817_3128726_-|plate	baseplate J-like family protein	plate	A0A1S6KZY6	Salmonella_phage	95.7	5.4e-152
AVJ81557.1|3128712_3129072_-	lysozyme family protein	NA	A0A1S6KZZ4	Salmonella_phage	93.3	8.3e-56
AVJ81558.1|3129068_3129647_-|plate	phage baseplate assembly V family protein	plate	E5G6N6	Salmonella_phage	96.9	4.8e-106
AVJ81559.1|3129715_3130144_-	phage virion morphogenesis protein	NA	E5G6N4	Salmonella_phage	90.7	9.8e-64
AVJ81560.1|3130154_3130586_-|tail	P2 phage tail completion R family protein	tail	A0A1S6KZY0	Salmonella_phage	88.8	1.3e-68
AVJ81561.1|3130681_3131110_-|lysis	phage lysis regulatory, LysB family protein	lysis	A0A1S6KZX8	Salmonella_phage	84.3	1.2e-56
AVJ81562.1|3131106_3131622_-	phage lysozyme family protein	NA	E5G6N1	Salmonella_phage	75.9	2.4e-72
AVJ81563.1|3131602_3131818_-	putative membrane protein	NA	E5G6N0	Salmonella_phage	66.2	2.0e-20
AVJ81564.1|3131821_3132025_-	phage Tail Protein X family protein	NA	E5G6M9	Salmonella_phage	100.0	3.8e-34
AVJ81565.1|3132024_3132492_-|head	phage head completion family protein	head	A0A1S6KZW8	Salmonella_phage	58.7	1.3e-48
AVJ81566.1|3132590_3133244_-|terminase	phage small terminase subunit	terminase	E5G6M7	Salmonella_phage	56.1	5.2e-56
AVJ81567.1|3133247_3134396_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	68.5	2.7e-132
AVJ81568.1|3134411_3135239_-|capsid	phage capsid scaffolding (GPO) serine peptidase family protein	capsid	A0A1S6KZW9	Salmonella_phage	66.2	1.7e-72
AVJ81569.1|3135433_3137152_+|terminase	ATPase subunit of terminase family protein	terminase	E5G6M4	Salmonella_phage	87.1	5.7e-304
AVJ81570.1|3137151_3138201_+|portal	phage portal protein, PBSX family	portal	E5G6M3	Salmonella_phage	79.1	4.2e-156
AVJ81571.1|3138338_3138464_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81572.1|3138602_3138863_-	hypothetical protein	NA	J9Q7T5	Salmonella_phage	59.0	4.0e-20
AVJ81573.1|3138936_3139170_-	dinI-like family protein	NA	A0A1S6L014	Salmonella_phage	89.6	3.2e-32
AVJ81574.1|3139180_3139369_-	putative levan regulatory protein	NA	A0A1S6L006	Salmonella_phage	90.0	3.7e-23
AVJ81575.1|3139765_3140773_+	D12 class N6 adenine-specific DNA methyltransferase family protein	NA	M1HZJ7	Paramecium_bursaria_Chlorella_virus	29.9	6.0e-11
AVJ81576.1|3140774_3141794_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81577.1|3141797_3142913_-	parB-like nuclease domain protein	NA	Q858T2	Yersinia_virus	25.7	1.7e-19
AVJ81578.1|3142928_3143060_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81579.1|3143202_3145437_-	bacteriophage replication protein A	NA	A0A0M4RTM8	Salmonella_phage	58.9	1.2e-242
AVJ81580.1|3145429_3146326_-	DNA adenine methylase family protein	NA	E5G6L8	Salmonella_phage	66.4	4.1e-104
AVJ81581.1|3146322_3146550_-	phage/conjugal plasmid C-4 type zinc finger, TraR family protein	NA	E5G6L7	Salmonella_phage	80.0	5.4e-29
AVJ81582.1|3146549_3146783_-	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	67.5	8.1e-20
AVJ81583.1|3146886_3147036_-	hypothetical protein	NA	S4TRP5	Salmonella_phage	68.1	2.2e-07
AVJ81584.1|3147035_3147461_-	tellurite resistance TerB family protein	NA	Q71TK7	Escherichia_phage	84.4	8.6e-60
AVJ81585.1|3147530_3147731_-	protein dhr	NA	A0A0M5M7U3	Salmonella_phage	73.8	3.0e-23
AVJ81586.1|3147720_3147945_-	protein fil	NA	A0A0M4RTI3	Salmonella_phage	78.4	1.9e-26
AVJ81587.1|3147952_3148462_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	88.8	1.8e-80
AVJ81588.1|3148496_3148733_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81589.1|3149254_3149449_+	hypothetical protein	NA	A0A0M4RE65	Salmonella_phage	43.9	2.2e-07
AVJ81590.1|3149460_3150360_+	putative nAD-dependent DNA ligase	NA	NA	NA	NA	NA
AVJ81591.1|3150369_3151383_+|integrase	phage integrase family protein	integrase	F1BUS9	Erwinia_phage	60.2	4.8e-117
AVJ81592.1|3151703_3152045_-	toxin YkfI	NA	NA	NA	NA	NA
3151496:3151545	attR	GACTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAAAT	NA	NA	NA	NA
AVJ81593.1|3152065_3152383_-	antitoxin YafW	NA	NA	NA	NA	NA
AVJ81594.1|3152400_3152622_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81595.1|3152630_3153107_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81596.1|3153122_3153602_-	intergenic-region protein	NA	A9J566	Pseudomonas_phage	30.5	1.4e-13
AVJ81597.1|3153737_3153884_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81598.1|3154455_3156651_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
AVJ81599.1|3156647_3157943_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81600.1|3157967_3159920_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
AVJ81601.1|3159983_3160838_-	DDE domain protein	NA	U5P429	Shigella_phage	41.9	8.0e-49
AVJ81602.1|3160834_3161134_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
>prophage 10
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	4847226	3359955	3413199	4847226	integrase,tail,capsid,portal,head,protease,terminase	uncultured_Caudovirales_phage(87.5%)	54	3394123:3394143	3410467:3410487
AVJ81802.1|3359955_3361323_+|protease	periplasmic pH-dependent serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.4	5.1e-21
AVJ81803.1|3361415_3362483_+	periplasmic serine peptidase DegS	NA	NA	NA	NA	NA
AVJ81804.1|3362534_3363473_-	malate dehydrogenase, NAD-dependent	NA	NA	NA	NA	NA
AVJ81805.1|3363900_3364341_+	arginine repressor	NA	NA	NA	NA	NA
AVJ81806.1|3364719_3364983_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81807.1|3365042_3365315_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81808.1|3365360_3366815_-	succinate-semialdehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AVJ81809.1|3366901_3368869_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
AVJ81810.1|3368874_3369807_-	efflux transporter, RND family, MFP subunit	NA	NA	NA	NA	NA
AVJ81811.1|3369814_3370018_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ81812.1|3370214_3371123_+	lysR substrate binding domain protein	NA	NA	NA	NA	NA
AVJ81813.1|3371235_3372681_-	modulator of DNA gyrase family protein	NA	NA	NA	NA	NA
AVJ81814.1|3372764_3376571_-	asmA-like C-terminal region family protein	NA	NA	NA	NA	NA
AVJ81815.1|3376613_3378083_-	ribonuclease, Rne/Rng family domain protein	NA	NA	NA	NA	NA
AVJ81816.1|3378072_3378666_-	septum formation protein Maf	NA	NA	NA	NA	NA
AVJ81817.1|3378675_3379164_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AVJ81818.1|3379163_3380180_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AVJ81819.1|3380242_3381286_-	rod shape-determining protein MreB	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
AVJ81820.1|3381568_3383509_-	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
AVJ81821.1|3383692_3384667_+	putative acrylyl-CoA reductase AcuI	NA	NA	NA	NA	NA
AVJ81822.1|3384744_3385746_+	oxidoreductase molybdopterin binding domain protein	NA	NA	NA	NA	NA
AVJ81823.1|3385746_3386346_+	ferric reductase like transmembrane component family protein	NA	NA	NA	NA	NA
AVJ81824.1|3386580_3387033_+	3-dehydroquinate dehydratase, type II	NA	NA	NA	NA	NA
AVJ81825.1|3387054_3387516_+	acetyl-CoA carboxylase, biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AVJ81826.1|3387526_3388876_+	acetyl-CoA carboxylase, biotin carboxylase subunit	NA	NA	NA	NA	NA
AVJ81827.1|3388984_3389227_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ81828.1|3389216_3390668_+	sodium/pantothenate symporter	NA	NA	NA	NA	NA
AVJ81829.1|3390679_3391561_+	ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AVJ81830.1|3391698_3392439_+	eukaryotic-type carbonic anhydrase family protein	NA	NA	NA	NA	NA
AVJ81831.1|3392768_3393734_+	TIM-barrel, nifR3 family protein	NA	NA	NA	NA	NA
AVJ81832.1|3393757_3394054_+	bacterial regulatory, Fis family protein	NA	NA	NA	NA	NA
3394123:3394143	attL	TGACTGCACCACTGACTGCAC	NA	NA	NA	NA
AVJ81833.1|3394183_3397648_-|tail	phage tail tape measure protein, lambda family	tail	A0A2H4JHR1	uncultured_Caudovirales_phage	100.0	0.0e+00
AVJ81834.1|3397661_3399323_-	phage Terminase family protein	NA	A0A2H4JB64	uncultured_Caudovirales_phage	100.0	0.0e+00
AVJ81835.1|3399306_3399663_-|terminase	phage terminase, small subunit, P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	100.0	2.5e-60
AVJ81836.1|3399620_3399812_-|terminase	phage terminase, small subunit, P27 family	terminase	A0A2H4JB90	uncultured_Caudovirales_phage	95.7	4.6e-05
AVJ81837.1|3399793_3399946_-	hypothetical protein	NA	A0A2H4JCY9	uncultured_Caudovirales_phage	100.0	2.4e-20
AVJ81838.1|3399938_3400331_-	HNH endonuclease family protein	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	99.2	6.2e-73
AVJ81839.1|3400381_3400675_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	100.0	5.5e-50
AVJ81840.1|3400671_3401010_-|head,tail	putative head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	100.0	2.9e-58
AVJ81841.1|3401006_3402242_-|portal	phage portal protein, HK97 family	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	100.0	7.6e-242
AVJ81842.1|3402243_3402804_-|head,protease	phage prohead protease, HK97 family	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	100.0	7.0e-102
AVJ81843.1|3402855_3404022_-|capsid	phage major capsid protein, HK97 family	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	100.0	6.1e-217
AVJ81844.1|3404253_3404553_-	hypothetical protein	NA	A0A2H4JB54	uncultured_Caudovirales_phage	100.0	1.1e-48
AVJ81845.1|3404565_3404820_-	hypothetical protein	NA	A0A2H4JEE4	uncultured_Caudovirales_phage	100.0	1.9e-38
AVJ81846.1|3405042_3406407_-	AAA domain protein	NA	A0A2H4JFA4	uncultured_Caudovirales_phage	100.0	7.1e-265
AVJ81847.1|3406403_3406772_-	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	100.0	4.6e-62
AVJ81848.1|3406768_3406996_-	hypothetical protein	NA	A0A2H4JBA1	uncultured_Caudovirales_phage	100.0	1.6e-33
AVJ81849.1|3406988_3407174_-	hypothetical protein	NA	A0A2H4JFH8	uncultured_Caudovirales_phage	100.0	1.9e-24
AVJ81850.1|3407166_3407436_-	hypothetical protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	100.0	6.2e-48
AVJ81851.1|3408103_3408313_-	prophage CP4-57 regulatory family protein	NA	A0A2H4JB58	uncultured_Caudovirales_phage	100.0	9.7e-33
AVJ81852.1|3408407_3409220_-	hypothetical protein	NA	A0A2H4JEC4	uncultured_Caudovirales_phage	100.0	6.7e-154
AVJ81853.1|3409216_3410440_-|integrase	phage integrase family protein	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	100.0	2.3e-243
AVJ81854.1|3410810_3410975_+	hypothetical protein	NA	NA	NA	NA	NA
3410467:3410487	attR	TGACTGCACCACTGACTGCAC	NA	NA	NA	NA
AVJ81855.1|3411114_3413199_+	diguanylate cyclase domain protein	NA	G3MA91	Bacillus_virus	34.8	9.2e-22
>prophage 1
CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	328871	4079	97642	328871	integrase,transposase	Escherichia_phage(24.24%)	91	20205:20264	105790:105804
AVJ83263.1|4079_5003_+|transposase	transposase DDE domain protein	transposase	Q9MCT5	Escherichia_phage	99.7	3.8e-177
AVJ83262.1|5326_5449_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ83359.1|5548_7015_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83405.1|7264_7504_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83320.1|7698_7878_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83490.1|8392_8560_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83541.1|8584_9289_+|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83459.1|9953_10658_+	resolvase, N terminal domain protein	NA	NA	NA	NA	NA
AVJ83379.1|10654_10879_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83521.1|11089_12583_+|transposase	transposase family protein	transposase	NA	NA	NA	NA
AVJ83279.1|12758_13061_-	phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I family protein	NA	NA	NA	NA	NA
AVJ83331.1|13147_13963_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	27.6	5.9e-09
AVJ83367.1|14650_15655_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AVJ83512.1|15733_18700_-	hypothetical protein	NA	A0A1B0V7H9	Salmonella_phage	72.9	0.0e+00
AVJ83274.1|18820_19525_-|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83386.1|19708_19927_+	hypothetical protein	NA	NA	NA	NA	NA
20205:20264	attL	TAGCGGGCGGCCGGAAGGTGAATGCTAGGCATGATCTAACCCTCGGTCTCTGGCGTCGCG	NA	NA	NA	NA
AVJ83318.1|20228_21068_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
20205:20264	attL	TAGCGGGCGGCCGGAAGGTGAATGCTAGGCATGATCTAACCCTCGGTCTCTGGCGTCGCG	NA	NA	NA	NA
AVJ83413.1|21591_22722_-	erythromycin esterase family protein	NA	NA	NA	NA	NA
AVJ83467.1|23103_23241_-	putative membrane protein	NA	NA	NA	NA	NA
AVJ83371.1|23512_23800_-	rifampin ADP-ribosyl transferase	NA	NA	NA	NA	NA
AVJ83429.1|23850_24033_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83329.1|24053_24863_-	aminoglycoside 3-N-acetyltransferase family protein	NA	O64018	Bacillus_phage	29.3	1.2e-17
AVJ83454.1|25104_26460_-|transposase	transposase DDE domain group 1 family protein	transposase	A0A1X9I6F6	Streptococcus_phage	29.7	2.2e-45
AVJ83395.1|26825_26951_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83292.1|27691_28705_+|integrase	integron integrase family protein	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AVJ83307.1|29497_30202_-|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83507.1|30178_30328_+|transposase	putative transposase	transposase	NA	NA	NA	NA
AVJ83399.1|31002_31194_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83364.1|31285_31438_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83465.1|31488_31605_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83400.1|32613_32868_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83338.1|32870_34910_-	description family protein	NA	E3T5J8	Cafeteria_roenbergensis_virus	25.3	1.7e-25
AVJ83342.1|34906_35893_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83556.1|36813_37206_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83372.1|38723_39221_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83463.1|39225_40614_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83410.1|41011_41308_+	helix-turn-helix family protein	NA	NA	NA	NA	NA
AVJ83348.1|41312_42398_+	hipA N-terminal domain protein	NA	NA	NA	NA	NA
AVJ83441.1|42687_42894_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83510.1|42994_43405_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83343.1|43459_44233_+	HNH endonuclease family protein	NA	G0X580	Salmonella_phage	37.2	2.4e-15
AVJ83504.1|44485_44911_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83494.1|45510_45768_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83284.1|45789_46641_+	HNH endonuclease family protein	NA	G0X580	Salmonella_phage	34.2	3.9e-11
AVJ83366.1|47247_47652_-	H-NS-like protein Sfh	NA	NA	NA	NA	NA
AVJ83290.1|47829_47943_-	putative membrane protein	NA	NA	NA	NA	NA
AVJ83354.1|49156_50137_-	hypothetical protein	NA	A0A077SK28	Escherichia_phage	99.1	1.8e-185
AVJ83557.1|50863_51205_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83339.1|52205_53141_-|transposase	tn3 transposase DDE domain protein	transposase	Q1MVP5	Enterobacteria_phage	79.1	4.1e-139
AVJ83545.1|53155_55213_-	hypothetical protein	NA	Q1MVP5	Enterobacteria_phage	57.5	7.7e-223
AVJ83444.1|55401_56106_-|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83468.1|56082_56232_+	P12 domain protein	NA	NA	NA	NA	NA
AVJ83397.1|56364_56613_+	addiction module toxin, RelE/StbE family protein	NA	NA	NA	NA	NA
AVJ83357.1|56739_57315_+	resolvase, N terminal domain protein	NA	A0A0A7NPV4	Enterobacteria_phage	52.7	5.6e-46
AVJ83439.1|57657_58506_-|integrase	integron integrase family protein	integrase	A0A1P8DJJ6	Virus_Rctr41k	49.3	2.6e-68
AVJ83404.1|58816_59608_+	nucleotidyltransferase domain protein	NA	NA	NA	NA	NA
AVJ83349.1|60112_60952_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
AVJ83548.1|61356_62898_+|transposase	transposase family protein	transposase	NA	NA	NA	NA
60917:62232	attR	CGCGACGCCAGAGACCGAGGGTTAGATCATGCCTAGCATTCACCTTCCGGCCGCCCGCTAAATATCTCCTTTTGGGTTGTTAATAAAACATCCAATAAGTTGACTGTGCGTGAAAAAGAAAGTTTTGTGTGATGGCGTTGAAGATCGCACCGTTAAGCTCTTATGTGGGATGGTGCAGAGCTCGACGACTACCGATAAAACGCAACCGCCGCAAACAGACAAGAAAAAGCCCCAACTGATAACAGTTGGGGCTTCAGTATTGTGATTGGTGGAGCAATAGCACCCTGAACCCAAAACCTTCTCGCTCAACCGGTAGTGGCTGATAACAACTCGTGAGGGCTATTGCGGGTTAAGCATTTAGCGATGTCTAGGGCCAGACTGGACGTCTGAACGCAAGCCGCTGATACTGTACATAACCACAGTATCAGCGGAGGATACCCATGTCGCTGGCAAGGAACGCCACGGCGAGTCAATCGCCCACTCAAACAAACGGTTACGAACGCCACCAACCCGACCAGACGCTGCTCTACCAGCTGGTTGAGCAGCACTACCCAGCCTTCAAAGCCTCACTCGAAGCCCAAGGTCAACACCTGCCTCGCTACATCCAACAAGAATTCAACGACCTCCTCCAATGTGGCCGTCTGGAGTATGGTTTCATGCGGGTTCGCTGCGAGGATTGTCATCACGAGCGTCTGGTCGCCTTCAGCTGTAAACGACGCGGCTTTTGCCCTAGCTGCGGTGCCCGCCGGATGGCCGAGAGTGCGGCGCTGCTGATAGACGAAGTCTTCCCCAAGGAGCCCATTCGCCAGTGGGTGCTCAGCTTTCCTTTCCAGCTACGCTTTTTGCTGGCTCGCCATCCCCAGCTGATGGGCCAGGTCTTGAGTATCGTCTATCGTACACTCTCAACTCATCTGATCAAAAAAGCCGGTTACACCAAAGCCTCTGCACAAACTGGCTCAGTGACTCTTATCCAACGCTTTGGCTCCGCGCTAAATCTCAATGTCCACTACCACATGCTGTTTCTCGATGGTGTCTATGCCGAAGATGACTATGGCAAGCAACGCTTCCATCGTGTCAAGGCACCCACTTACGATGAGCTGAATACGCTCGCTCACACCCTCAGCCATCGCATCGCTCGCTGCATGGAAAAGCGTGGGATTTTGGAGCGTGATGCCGAGAATACGTGGTTGACACTGGAAGAGGGCGAAGACGATACGCTGACTCAATTACATGGTGCTTCGGTTACGTATCGCATTGCCGTCGGCCCCCAGCAAGGGCGCAAAGTCTTCACCCTGCAAACCTTGCCAGGGCGTGAG	NA	NA	NA	NA
AVJ83295.1|63235_63664_+	BRCA1 C Terminus domain protein	NA	A0A1V0SB21	Catovirus	34.1	4.1e-09
60917:62232	attR	CGCGACGCCAGAGACCGAGGGTTAGATCATGCCTAGCATTCACCTTCCGGCCGCCCGCTAAATATCTCCTTTTGGGTTGTTAATAAAACATCCAATAAGTTGACTGTGCGTGAAAAAGAAAGTTTTGTGTGATGGCGTTGAAGATCGCACCGTTAAGCTCTTATGTGGGATGGTGCAGAGCTCGACGACTACCGATAAAACGCAACCGCCGCAAACAGACAAGAAAAAGCCCCAACTGATAACAGTTGGGGCTTCAGTATTGTGATTGGTGGAGCAATAGCACCCTGAACCCAAAACCTTCTCGCTCAACCGGTAGTGGCTGATAACAACTCGTGAGGGCTATTGCGGGTTAAGCATTTAGCGATGTCTAGGGCCAGACTGGACGTCTGAACGCAAGCCGCTGATACTGTACATAACCACAGTATCAGCGGAGGATACCCATGTCGCTGGCAAGGAACGCCACGGCGAGTCAATCGCCCACTCAAACAAACGGTTACGAACGCCACCAACCCGACCAGACGCTGCTCTACCAGCTGGTTGAGCAGCACTACCCAGCCTTCAAAGCCTCACTCGAAGCCCAAGGTCAACACCTGCCTCGCTACATCCAACAAGAATTCAACGACCTCCTCCAATGTGGCCGTCTGGAGTATGGTTTCATGCGGGTTCGCTGCGAGGATTGTCATCACGAGCGTCTGGTCGCCTTCAGCTGTAAACGACGCGGCTTTTGCCCTAGCTGCGGTGCCCGCCGGATGGCCGAGAGTGCGGCGCTGCTGATAGACGAAGTCTTCCCCAAGGAGCCCATTCGCCAGTGGGTGCTCAGCTTTCCTTTCCAGCTACGCTTTTTGCTGGCTCGCCATCCCCAGCTGATGGGCCAGGTCTTGAGTATCGTCTATCGTACACTCTCAACTCATCTGATCAAAAAAGCCGGTTACACCAAAGCCTCTGCACAAACTGGCTCAGTGACTCTTATCCAACGCTTTGGCTCCGCGCTAAATCTCAATGTCCACTACCACATGCTGTTTCTCGATGGTGTCTATGCCGAAGATGACTATGGCAAGCAACGCTTCCATCGTGTCAAGGCACCCACTTACGATGAGCTGAATACGCTCGCTCACACCCTCAGCCATCGCATCGCTCGCTGCATGGAAAAGCGTGGGATTTTGGAGCGTGATGCCGAGAATACGTGGTTGACACTGGAAGAGGGCGAAGACGATACGCTGACTCAATTACATGGTGCTTCGGTTACGTATCGCATTGCCGTCGGCCCCCAGCAAGGGCGCAAAGTCTTCACCCTGCAAACCTTGCCAGGGCGTGAG	NA	NA	NA	NA
AVJ83344.1|64096_64849_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83449.1|64835_65684_-|integrase	integron integrase family protein	integrase	A0A1P8DJJ6	Virus_Rctr41k	49.3	2.6e-68
AVJ83482.1|66006_66810_+	phosphotransferase enzyme family protein	NA	NA	NA	NA	NA
AVJ83536.1|67016_67646_+	aminoglycoside/hydroxyurea antibiotic resistance kinase family protein	NA	NA	NA	NA	NA
AVJ83360.1|67826_68618_+	sprT-like family protein	NA	NA	NA	NA	NA
AVJ83356.1|68632_68974_-	putative ardK protein	NA	NA	NA	NA	NA
AVJ83376.1|69429_70134_-|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83493.1|70158_70299_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83445.1|70299_70776_-	cupin fold metallo, WbuC family protein	NA	NA	NA	NA	NA
AVJ83265.1|70852_72472_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83489.1|72660_73584_-|transposase	transposase DDE domain protein	transposase	Q9MCT5	Escherichia_phage	99.3	2.4e-176
AVJ83442.1|73667_75014_+	heavy metal sensor kinase family protein	NA	W8CYF6	Bacillus_phage	26.6	8.8e-18
AVJ83321.1|75231_75666_+	putative copper-binding protein PcoE	NA	NA	NA	NA	NA
AVJ83270.1|75923_77039_-	description family protein	NA	NA	NA	NA	NA
AVJ83298.1|77161_77434_+	transcriptional repressor RcnR	NA	NA	NA	NA	NA
AVJ83506.1|77899_78718_+	methyltransferase domain protein	NA	NA	NA	NA	NA
AVJ83304.1|78714_79920_+	putative aTP/GTP-binding protein	NA	NA	NA	NA	NA
AVJ83469.1|80199_81519_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83505.1|81769_83155_-	DNA (cytosine-5-)-methyltransferase family protein	NA	E5E3X6	Burkholderia_phage	52.3	3.3e-100
AVJ83389.1|83845_84826_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83523.1|86472_86703_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83327.1|86843_87119_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83259.1|87613_89089_+	sulfate transporter family protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	74.6	3.3e-199
AVJ83464.1|89107_89935_+	universal stress family protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	37.2	4.9e-43
AVJ83420.1|89994_90420_-	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	1.6e-50
AVJ83486.1|90432_91722_-	arsenite/antimonite efflux pump membrane family protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	71.4	9.9e-168
AVJ83272.1|91767_92088_-	bacterial regulatory, arsR family protein	NA	A0A2H4J145	uncultured_Caudovirales_phage	53.7	1.7e-20
AVJ83299.1|92174_92879_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	72.9	8.8e-86
AVJ83487.1|92911_94315_-|integrase	integrase core domain protein	integrase	NA	NA	NA	NA
AVJ83308.1|94534_95458_-|transposase	transposase DDE domain protein	transposase	Q1MVF0	Enterobacteria_phage	98.7	4.6e-175
AVJ83485.1|95577_96210_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83380.1|96238_97642_-|integrase	integrase core domain protein	integrase	NA	NA	NA	NA
105790:105804	attR	GTGCTGCCATCAATC	NA	NA	NA	NA
>prophage 2
CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	328871	155058	217579	328871	transposase,integrase	Escherichia_phage(21.43%)	59	194762:194777	213827:214629
AVJ83460.1|155058_156129_-|integrase	phage integrase family protein	integrase	NA	NA	NA	NA
AVJ83347.1|156127_157627_+	hypothetical protein	NA	F1C5A5	Cronobacter_phage	44.9	1.0e-91
AVJ83530.1|157672_158482_-	DSBA-like thioredoxin domain protein	NA	NA	NA	NA	NA
AVJ83558.1|158744_159200_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83475.1|159259_159520_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83310.1|160132_160882_-	thioredoxin-like domain protein	NA	NA	NA	NA	NA
AVJ83291.1|161029_161569_+	transglycosylase SLT domain protein	NA	NA	NA	NA	NA
AVJ83314.1|162332_163394_+	HNH endonuclease family protein	NA	NA	NA	NA	NA
AVJ83415.1|164032_167983_-	putative traG protein	NA	NA	NA	NA	NA
AVJ83407.1|167991_169407_-	conjugative relaxosome accessory transposon family protein	NA	NA	NA	NA	NA
AVJ83433.1|169396_170443_-	F plasmid transfer operon family protein	NA	NA	NA	NA	NA
AVJ83551.1|171548_172349_-	putative trhR	NA	NA	NA	NA	NA
AVJ83374.1|173590_174328_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83281.1|174337_177484_+	helicase family protein	NA	NA	NA	NA	NA
AVJ83346.1|177483_179568_+	conjugative coupling factor TraD, SXT/TOL subfamily protein	NA	NA	NA	NA	NA
AVJ83480.1|179567_180677_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83552.1|181336_182518_+	peptidase S49 family protein	NA	B8QTU8	Erwinia_phage	29.2	7.5e-13
AVJ83447.1|182519_183251_+	nuclease-related domain protein	NA	NA	NA	NA	NA
AVJ83384.1|183277_183400_+	putative membrane protein	NA	NA	NA	NA	NA
AVJ83365.1|183956_184241_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83280.1|184692_184812_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83301.1|185329_185446_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83369.1|185923_186460_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83528.1|186527_186965_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83377.1|187009_187306_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83332.1|187440_188106_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83324.1|188456_188738_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83283.1|188803_189988_-	putative parB-like protein	NA	NA	NA	NA	NA
AVJ83553.1|190404_190581_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83451.1|191091_192036_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83539.1|192131_192734_+	hypothetical protein	NA	A0A1V0E5L6	Salmonella_phage	42.6	1.7e-08
AVJ83540.1|192787_193144_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83483.1|193759_193996_+	hypothetical protein	NA	NA	NA	NA	NA
194762:194777	attL	ATGGCCTTCTTCTCCT	NA	NA	NA	NA
AVJ83361.1|195121_195361_-	antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
194762:194777	attL	ATGGCCTTCTTCTCCT	NA	NA	NA	NA
AVJ83430.1|195623_196547_-	cation diffusion facilitator transporter family protein	NA	NA	NA	NA	NA
AVJ83278.1|197794_199033_-|transposase	transposase family protein	transposase	A0A0U3ULR1	Bacillus_phage	23.1	2.5e-11
AVJ83550.1|199454_200774_-|integrase	integrase core domain protein	integrase	NA	NA	NA	NA
AVJ83412.1|200969_201821_-	DDE domain protein	NA	A0A2I6AZV9	Macacine_betaherpesvirus	95.5	5.8e-108
200870:200885	attR	ATGGCCTTCTTCTCCT	NA	NA	NA	NA
AVJ83458.1|201817_202339_-|transposase	transposase family protein	transposase	A0A2I6AZV8	Macacine_betaherpesvirus	94.2	2.9e-86
200870:200885	attR	ATGGCCTTCTTCTCCT	NA	NA	NA	NA
AVJ83417.1|202671_202902_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83330.1|203493_203775_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83479.1|203920_204097_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83333.1|204150_204462_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83350.1|204924_205149_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83418.1|205203_205407_-	putative membrane protein	NA	NA	NA	NA	NA
AVJ83285.1|205959_206430_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83555.1|206455_206767_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83401.1|207782_208010_-	hypothetical protein	NA	NA	NA	NA	NA
AVJ83549.1|208184_209075_-	putative klaC	NA	NA	NA	NA	NA
AVJ83297.1|209067_209268_-	toxic anion resistance family protein	NA	NA	NA	NA	NA
AVJ83293.1|209273_209411_-|transposase	putative transposase	transposase	NA	NA	NA	NA
AVJ83311.1|209387_210092_+|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83432.1|210236_211760_+	HTH domain protein	NA	A0A2L1IVA1	Escherichia_phage	32.4	1.5e-26
AVJ83336.1|211746_212487_+	istB-like ATP binding family protein	NA	U5N3V8	Enterobacteria_phage	41.7	4.4e-43
AVJ83322.1|213445_213826_+|integrase	phage integrase, N-terminal SAM-like domain protein	integrase	A0A1P8DJJ6	Virus_Rctr41k	32.4	1.3e-06
AVJ83461.1|213872_214577_+|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83317.1|214686_215928_-	bacterial stress family protein	NA	NA	NA	NA	NA
AVJ83501.1|216356_216932_-	bacterial stress family protein	NA	K4JRX3	Caulobacter_phage	41.6	8.7e-31
AVJ83492.1|217000_217579_-	bacterial stress family protein	NA	A0A2P1N0L4	Streptomyces_phage	40.0	2.5e-06
>prophage 1
CP027145	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed2, complete sequence	101548	35090	41383	101548	transposase	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
AVJ83690.1|35090_35444_+	bacterial regulatory, arsR family protein	NA	A0A2H4J145	uncultured_Caudovirales_phage	47.2	5.9e-22
AVJ83681.1|35501_35981_+	low molecular weight phosphotyrosine phosphatase family protein	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	49.4	7.7e-33
AVJ83672.1|36081_36369_+	arsenical resistance operon trans-acting repressor ArsD	NA	NA	NA	NA	NA
AVJ83579.1|37622_38327_-|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83598.1|38317_38986_+	anion-transporting ATPase family protein	NA	NA	NA	NA	NA
AVJ83660.1|39026_40316_+	arsenite/antimonite efflux pump membrane family protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	72.3	7.3e-171
AVJ83595.1|40373_40802_+	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	72.1	4.3e-51
AVJ83581.1|40873_41383_+	low molecular weight phosphotyrosine phosphatase family protein	NA	A0A2H4J437	uncultured_Caudovirales_phage	37.1	8.5e-14
>prophage 2
CP027145	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed2, complete sequence	101548	50035	56996	101548	transposase	uncultured_Caudovirales_phage(33.33%)	12	NA	NA
AVJ83619.1|50035_50758_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	72.2	8.7e-97
AVJ83572.1|50978_51239_-	crcB-like family protein	NA	A0A2H4J148	uncultured_Caudovirales_phage	55.8	8.4e-18
AVJ83576.1|51440_52730_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	54.7	1.5e-123
AVJ83656.1|52746_53172_-	putative universal stress protein A	NA	NA	NA	NA	NA
AVJ83667.1|53168_53396_-	DHHA2 domain protein	NA	NA	NA	NA	NA
AVJ83612.1|53429_53597_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83675.1|53643_54348_+|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83643.1|54421_54829_+	resolvase, N terminal domain protein	NA	A0A219YA40	Aeromonas_phage	36.3	8.9e-14
AVJ83587.1|55013_55571_+	osmC-like family protein	NA	NA	NA	NA	NA
AVJ83577.1|55721_56294_+	bacterial regulatory, tetR family protein	NA	NA	NA	NA	NA
AVJ83651.1|56298_56637_+	alkylhydroperoxidase AhpD family core domain protein	NA	NA	NA	NA	NA
AVJ83668.1|56666_56996_-	thioredoxin-like domain protein	NA	V9SJ74	Achromobacter_phage	34.7	9.7e-11
>prophage 1
CP027143	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed3	51949	32256	39582	51949	transposase	Enterobacteria_phage(37.5%)	14	NA	NA
AVJ83249.1|32256_32766_-	resolvase, N terminal domain protein	NA	M4QQC6	Vibrio_phage	39.6	1.0e-14
AVJ83250.1|32965_33511_-	plasmid pRiA4b ORF-3-like family protein	NA	NA	NA	NA	NA
AVJ83234.1|33640_33766_+|transposase	transposase domain protein	transposase	NA	NA	NA	NA
AVJ83240.1|34011_34605_+	resolvase, N terminal domain protein	NA	A0A0A7NPV4	Enterobacteria_phage	47.2	1.4e-31
AVJ83207.1|34923_35166_-	pentapeptide repeats family protein	NA	NA	NA	NA	NA
AVJ83229.1|35406_35529_+	hypothetical protein	NA	NA	NA	NA	NA
AVJ83238.1|35974_36139_+|transposase	transposase family protein	transposase	Q76S41	Shigella_phage	72.2	4.6e-14
AVJ83246.1|36178_36343_+|transposase	putative iS2 transposase	transposase	Q76S41	Shigella_phage	83.3	3.4e-17
AVJ83204.1|36659_37364_-|transposase	transposase IS66 family protein	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AVJ83256.1|37340_37463_+|transposase	putative tn3 transposase DDE domain protein	transposase	NA	NA	NA	NA
AVJ83216.1|37498_37927_+|transposase	tn3 transposase DDE domain protein	transposase	Q1MVP5	Enterobacteria_phage	77.0	3.4e-56
AVJ83243.1|37936_38302_-	putative fipA	NA	NA	NA	NA	NA
AVJ83214.1|38308_38695_-	single-stranded DNA-binding family protein	NA	A0A0A0P1Q9	Enterobacteria_phage	88.3	1.5e-58
AVJ83232.1|39087_39582_-	transglycosylase SLT domain protein	NA	A0A1P8CWQ1	Bacillus_phage	54.0	2.6e-23
