assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002970935.1_ASM297093v1	CP027194	Lactobacillus sp. CBA3606 chromosome, complete genome	4	1703961-1706004	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas14j,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	Type I-E	GTATTCCCCACGCATGTGGGGGTGATCC,GTATTCCCCACGCATGTGGGGGTGATCCT,GTATTCCCCACGCATGTGGGGGTGATCC	28,29,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	32,33,33	33	TypeI-E	cas14j,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,RT	NA|66aa|up_8|CP027194.1_1694009_1694207_+,NA|358aa|down_1|CP027194.1_1707622_1708696_+,NA|497aa|down_2|CP027194.1_1708922_1710413_+	NA|284aa|up_9|CP027194.1_1692215_1693067_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|66aa|up_8|CP027194.1_1694009_1694207_+	NA	cas3|916aa|up_7|CP027194.1_1694606_1697354_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|570aa|up_6|CP027194.1_1697346_1699056_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|199aa|up_5|CP027194.1_1699066_1699663_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|358aa|up_4|CP027194.1_1699662_1700736_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|228aa|up_3|CP027194.1_1700716_1701400_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|224aa|up_2|CP027194.1_1701412_1702084_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|318aa|up_1|CP027194.1_1702087_1703041_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|298aa|up_0|CP027194.1_1703037_1703931_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|142aa|down_0|CP027194.1_1706827_1707253_+	pfam13240, zinc_ribbon_2, zinc-ribbon domain	NA|358aa|down_1|CP027194.1_1707622_1708696_+	NA	NA|497aa|down_2|CP027194.1_1708922_1710413_+	NA	NA|217aa|down_3|CP027194.1_1712559_1713210_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|347aa|down_4|CP027194.1_1713507_1714548_+	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like	NA|250aa|down_5|CP027194.1_1714601_1715351_-	pfam03883, H2O2_YaaD, Peroxide stress protein YaaA	NA|287aa|down_6|CP027194.1_1715613_1716474_+	PRK06194, PRK06194, hypothetical protein; Provisional	NA|282aa|down_7|CP027194.1_1716504_1717350_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|219aa|down_8|CP027194.1_1717385_1718042_+	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN	NA|512aa|down_9|CP027194.1_1718170_1719706_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain
GCA_002970935.1_ASM297093v1	CP027194	Lactobacillus sp. CBA3606 chromosome, complete genome	6	2303733-2303879	6	CRISPRCasFinder	no	csa3	cas14j,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	Type I-A	TGACTAGCGTAGCTAAGCGGAAGTAGTTGGCATTGCGAACACGT	44	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,RT	NA|273aa|up_7|CP027194.1_2296215_2297034_+,NA	NA|148aa|up_9|CP027194.1_2295083_2295527_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|172aa|up_8|CP027194.1_2295696_2296212_+	pfam10351, Apt1, Golgi-body localization protein domain	NA|273aa|up_7|CP027194.1_2296215_2297034_+	NA	NA|208aa|up_6|CP027194.1_2297121_2297745_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|400aa|up_5|CP027194.1_2298174_2299374_+	PRK07309, PRK07309, pyridoxal phosphate-dependent aminotransferase	NA|331aa|up_4|CP027194.1_2299373_2300366_+	cd12186, LDH, D-Lactate dehydrogenase and D-2-Hydroxyisocaproic acid dehydrogenase (D-HicDH), NAD-binding and catalytic domains	NA|247aa|up_3|CP027194.1_2300751_2301492_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|279aa|up_2|CP027194.1_2301512_2302349_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|214aa|up_1|CP027194.1_2302348_2302990_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|218aa|up_0|CP027194.1_2303005_2303659_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|443aa|down_0|CP027194.1_2303947_2305276_-	PRK11357, frlA, amino acid permease	NA|296aa|down_1|CP027194.1_2305570_2306458_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|429aa|down_2|CP027194.1_2306561_2307848_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|148aa|down_3|CP027194.1_2307938_2308382_+	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|105aa|down_4|CP027194.1_2308515_2308830_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|218aa|down_5|CP027194.1_2309184_2309838_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|219aa|down_6|CP027194.1_2309853_2310510_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|619aa|down_7|CP027194.1_2310570_2312427_-	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family	NA|313aa|down_8|CP027194.1_2312444_2313383_-	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily	NA|212aa|down_9|CP027194.1_2313621_2314257_-	PRK10847, PRK10847, DedA family protein
GCA_002970935.1_ASM297093v1	CP027194	Lactobacillus sp. CBA3606 chromosome, complete genome	7	2382436-2384110	2,7,2	PILER-CR,CRISPRCasFinder,CRT	no		cas14j,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	Orphan	GTATTCCCCACGCATGTGGGGGTGATCC,GTATTCCCCACGCATGTGGGGGTGATCCT,GTATTCCCCACGCATGTGGGGGTGATCC	28,29,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	27,27,27	27	Orphan	cas14j,cas3,DinG,DEDDh,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,RT	NA|92aa|up_6|CP027194.1_2371590_2371866_-,NA|68aa|down_0|CP027194.1_2384256_2384460_-,NA|72aa|down_8|CP027194.1_2393056_2393272_-	NA|128aa|up_9|CP027194.1_2370507_2370891_-	pfam06125, DUF961, Bacterial protein of unknown function (DUF961)	NA|107aa|up_8|CP027194.1_2370926_2371247_-	pfam06125, DUF961, Bacterial protein of unknown function (DUF961)	NA|83aa|up_7|CP027194.1_2371302_2371551_-	pfam04026, SpoVG, SpoVG	NA|92aa|up_6|CP027194.1_2371590_2371866_-	NA	NA|1308aa|up_5|CP027194.1_2371892_2375816_-	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|95aa|up_4|CP027194.1_2376366_2376651_-	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein	NA|325aa|up_3|CP027194.1_2376986_2377961_+	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|332aa|up_2|CP027194.1_2378086_2379082_+	pfam15983, DUF4767, Domain of unknown function (DUF4767)	NA|845aa|up_1|CP027194.1_2379169_2381704_+	cd09601, M1_APN-Q_like, Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1)	NA|168aa|up_0|CP027194.1_2381771_2382275_+	pfam13462, Thioredoxin_4, Thioredoxin	NA|68aa|down_0|CP027194.1_2384256_2384460_-	NA	NA|98aa|down_1|CP027194.1_2385006_2385300_-	pfam06152, Phage_min_cap2, Phage minor capsid protein 2	NA|336aa|down_2|CP027194.1_2385468_2386476_-	PRK05425, PRK05425, asparagine synthetase AsnA; Provisional	NA|469aa|down_3|CP027194.1_2386880_2388287_-	pfam03577, Peptidase_C69, Peptidase family C69	NA|67aa|down_4|CP027194.1_2388744_2388945_+	pfam13518, HTH_28, Helix-turn-helix domain	NA|598aa|down_5|CP027194.1_2389122_2390916_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|291aa|down_6|CP027194.1_2391132_2392005_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|110aa|down_7|CP027194.1_2392076_2392406_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|72aa|down_8|CP027194.1_2393056_2393272_-	NA	NA|606aa|down_9|CP027194.1_2393442_2395260_+	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases
