bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	3.3|1499755|21|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	95.24	21	1	0	1	21	1191147	1191167	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.005	31.7	1.0	GCCGGCGGGCTGCTCTACGGC	1191147-1191167	GCCGGCGGGCTGCTGTACGGC	1
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	3.3|1499755|21|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	95.24	21	1	0	1	21	2056047	2056067	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.005	31.7	1.0	GCCGGCGGGCTGCTCTACGGC	2056047-2056067	GCCGGCGGGCTGCTGTACGGC	1
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	3.3|1499755|21|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	90.48	21	2	0	1	21	2056206	2056226	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.046	28.5	1.0	GCCGGCGGGCTGCTCTACGGC	2056206-2056226	GCCGGCGGGCTGCTGTTCGGC	2
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	3.3|1499755|21|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	90.48	21	2	0	1	21	2387116	2387136	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.046	28.5	1.0	GCCGGCGGGCTGCTCTACGGC	2387116-2387136	GCCGGCGGCCTGGTCTACGGC	2
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	3.5|1499854|21|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	90.48	21	2	0	1	21	2457632	2457612	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.046	28.5	1.0	AATGGCGGGCTGCTGTTCGGC	2457612-2457632	GCCGAATAGCAGCCCGCCGTT	2
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	8.1|3186684|21|CP022578|CRISPRCasFinder	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	95.24	21	1	0	1	21	3416532	3416552	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.005	31.7	1.0	GTTGCCGAAGAACCCGGCGTT	3416532-3416552	GTTGCCGACGAACCCGGCGTT	1
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	9.15|3215198|24|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	24	0	0	1	24	3212192	3212215	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	2e-05	39.6	1.0	CAACGCCGTGCTGATCGGCAACGG	3212192-3212215	CAACGCCGTGCTGATCGGCAACGG	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	9.15|3215198|24|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	95.83	24	1	0	1	24	1125030	1125053	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	2e-04	36.5	1.0	CAACGCCGTGCTGATCGGCAACGG	1125030-1125053	CAACGCCGTGGTGATCGGCAACGG	1
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	9.15|3215198|24|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	95.83	24	1	0	1	24	2707641	2707618	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	2e-04	36.5	1.0	CAACGCCGTGCTGATCGGCAACGG	2707618-2707641	CCGTTGCCGATCAGCACGGCGCTG	1
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	9.15|3215198|24|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	91.67	24	2	0	1	24	1688317	1688340	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.002	33.3	1.0	CAACGCCGTGCTGATCGGCAACGG	1688317-1688340	CAACGCCCTGCTGTTCGGCAACGG	2
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	9.15|3215198|24|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	91.67	24	2	0	1	24	2621247	2621224	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.002	33.3	1.0	CAACGCCGTGCTGATCGGCAACGG	2621224-2621247	CCGTTGCCGATCAGCCCGGCCTTG	2
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.4|4009397|20|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	20	0	0	1	20	4010612	4010631	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	0.002	33.3	1.0	TTGAAGTTGGCCCCGCCGCT	4010612-4010631	TTGAAGTTGGCCCCGCCGCT	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.5|4009460|41|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	41	0	0	1	41	4010675	4010715	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	5e-13	66.6	1.0	GTGCCGCCTTTGCCGGGGTCGCCGGCGCCGGTGCCTGCGTT	4010675-4010715	GTGCCGCCTTTGCCGGGGTCGCCGGCGCCGGTGCCTGCGTT	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.6|4009544|29|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	29	0	0	1	29	4010759	4010787	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	9e-08	47.5	1.0	GTGCCGCCGTTGCTGCCGTTGCTGAAGCT	4010759-4010787	GTGCCGCCGTTGCTGCCGTTGCTGAAGCT	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.8|4009685|35|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	35	0	0	1	35	4010294	4010328	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	2e-10	57.1	1.0	GCAAAGCCGGGCTGGCCGCCCAATCCGGAACCGCT	4010294-4010328	GCAAAGCCGGGCTGGCCGCCCAATCCGGAACCGCT	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.9|4009763|47|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	47	0	0	1	47	4010372	4010418	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	1e-15	76.1	1.0	ATGCCCGCGTTGCCTGCGGTGCCGCCGGTGTTGGCTAGGCCGCCGGC	4010372-4010418	ATGCCCGCGTTGCCTGCGGTGCCGCCGGTGTTGGCTAGGCCGCCGGC	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.10|4009853|26|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	26	0	0	1	26	4010462	4010487	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	2e-06	42.8	1.0	GCGGAGTCGTCGCCGGCCCCGCCGGT	4010462-4010487	GCGGAGTCGTCGCCGGCCCCGCCGGT	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.11|4009922|38|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	97.37	38	1	0	1	38	4010531	4010568	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	1e-10	58.6	1.0	GTGGCGCTGCTGAGTCCGTCGGTGTTTAGGCCGCCGTT	4010531-4010568	GTGGCGCTGCTGAGTCCGTCGGTGTTTAGGCCGCCTTT	1
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.12|4010003|29|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	29	0	0	1	29	4010612	4010640	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	9e-08	47.5	1.0	TTGAAGTTGGCCCCGCCGCTACCGCCGGC	4010612-4010640	TTGAAGTTGGCCCCGCCGCTACCGCCGGC	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.13|4010075|32|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	32	0	0	1	32	4010684	4010715	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	5e-09	52.3	1.0	TTGCCGGGGTCGCCGGCGCCGGTGCCTGCGTT	4010684-4010715	TTGCCGGGGTCGCCGGCGCCGGTGCCTGCGTT	0
CP022578	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	11.14|4010150|56|CP022578|CRT	CP022578.1	Mycobacterium tuberculosis strain WC059 chromosome, complete genome	100.00	56	0	0	1	56	4010759	4010814	431179-432326|1390476-1390617|1499614-1500609|2711007-2711164|2856730-2856806|3185943-3186039|3186120-3186390|3186660-3187001|3214234-3215281|3848103-3848191|4009084-4010248|4028963-4029395|4030151-4030830|4159135-4160403|4199806-4199931	8e-20	90.3	1.0	GTGCCGCCGTTGCTGCCGTTGCTGAAGCTGATGCCAGCACCCCCGGCGCCGCCTTG	4010759-4010814	GTGCCGCCGTTGCTGCCGTTGCTGAAGCTGATGCCAGCACCCCCGGCGCCGCCTTG	0
