The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027562	Stenotrophomonas maltophilia strain SJTH1 chromosome, complete genome	4932325	613663	622791	4932325		Enterobacteria_phage(50.0%)	8	NA	NA
AVO28933.1|613663_614719_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.2	3.2e-79
AVO28934.1|614733_615621_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.9	1.8e-96
AVO28935.1|615617_616175_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	50.6	1.4e-46
AVO28936.1|616171_617077_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	38.6	8.8e-30
AVO28937.1|617314_620632_-	helicase	NA	Q9YNZ9	Choristoneura_fumiferana_nuclear_polyhedrosis_virus	30.1	1.3e-46
AVO28938.1|620792_621524_+	CoA transferase subunit A	NA	NA	NA	NA	NA
AVO28939.1|621525_622158_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AVO28940.1|622203_622791_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A2K9L0M4	Tupanvirus	33.1	2.0e-22
>prophage 2
CP027562	Stenotrophomonas maltophilia strain SJTH1 chromosome, complete genome	4932325	975360	1049358	4932325	protease,tail,integrase,plate	Escherichia_phage(23.08%)	69	1035604:1035619	1050279:1050294
AVO29229.1|975360_975987_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	7.7e-57
AVO29230.1|976113_977403_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.0	2.2e-135
AVO29231.1|977545_979996_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.1	3.0e-221
AVO29232.1|980213_980486_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	61.8	7.7e-22
AVO29233.1|981364_983320_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AVO29234.1|983536_984736_-	lytic transglycosylase	NA	NA	NA	NA	NA
AVO29235.1|984732_985497_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AVO29236.1|985508_986153_+	hypothetical protein	NA	NA	NA	NA	NA
AVO29237.1|986166_986619_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	53.4	7.7e-43
AVO29238.1|986623_987355_+	DNA polymerase III subunit epsilon	NA	A2I2Z6	Vibrio_virus	28.9	1.3e-07
AVO29239.1|987424_988129_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
AVO29240.1|988880_989285_+	hypothetical protein	NA	A0A1C9C5K8	Heterosigma_akashiwo_virus	35.3	1.3e-17
AVO29241.1|989303_990350_-	ADP-heptose--LPS heptosyltransferase	NA	NA	NA	NA	NA
AVO29242.1|990370_991120_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
AVO29243.1|991119_991887_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AVO29244.1|991883_992273_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AVO29245.1|992746_993064_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA	NA
AVO29246.1|993421_1004314_+	transporter	NA	NA	NA	NA	NA
AVO29247.1|1004370_1004814_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVO29248.1|1004889_1005996_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29249.1|1006549_1008613_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	41.8	4.3e-48
AVO29250.1|1008619_1008940_+	nucleoid-associated protein, YbaB/EbfC family	NA	NA	NA	NA	NA
AVO29251.1|1009061_1009661_+	recombination protein RecR	NA	NA	NA	NA	NA
AVO29252.1|1009728_1010088_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
AVO29253.1|1010177_1010705_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29254.1|1010701_1012651_-	DUF3488 domain-containing protein	NA	NA	NA	NA	NA
AVO29255.1|1012643_1013588_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AVO29256.1|1013590_1014544_-	ATPase	NA	NA	NA	NA	NA
AVO29257.1|1014586_1016422_+	hypothetical protein	NA	NA	NA	NA	NA
AVO29258.1|1016522_1017092_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AVO29259.1|1017205_1017715_+	hypothetical protein	NA	NA	NA	NA	NA
AVO29260.1|1017822_1018017_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AVO29261.1|1018108_1019086_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
AVO29262.1|1019163_1019946_+	serine/threonine protein phosphatase	NA	NA	NA	NA	NA
AVO29263.1|1020113_1021058_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AVO29264.1|1021140_1021884_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.3	4.7e-13
AVO29265.1|1022036_1022276_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	44.6	4.6e-10
AVO29266.1|1022419_1023682_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AVO29267.1|1023837_1025202_+	aminodeoxychorismate synthase, component I	NA	NA	NA	NA	NA
AVO29268.1|1025409_1026471_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AVO29269.1|1026467_1027133_+	dTMP kinase	NA	W8D0J5	Erwinia_phage	34.9	1.2e-20
AVO29270.1|1027129_1028086_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AVO29271.1|1028082_1028436_+	pilus assembly protein PilZ	NA	NA	NA	NA	NA
AVO29272.1|1028766_1029330_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29273.1|1029382_1029790_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29274.1|1030356_1030737_+	tautomerase family protein	NA	NA	NA	NA	NA
AVO29275.1|1030784_1031207_+	hypothetical protein	NA	NA	NA	NA	NA
AVO29276.1|1031274_1032348_-|tail	phage tail protein	tail	D5LGY1	Escherichia_phage	51.6	2.5e-95
AVO29277.1|1032338_1032554_-|tail	phage tail protein	tail	A0A088FVH7	Escherichia_phage	53.6	8.8e-13
AVO29278.1|1032537_1033005_-|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	38.8	1.6e-14
AVO29279.1|1033007_1035458_-|tail	phage tail tape measure protein	tail	K4ICR4	Acidithiobacillus_phage	24.3	1.6e-09
AVO29280.1|1035578_1035869_-|tail	phage tail assembly protein	tail	A0A1W6JT47	Escherichia_phage	59.0	6.5e-19
1035604:1035619	attL	GCCTGCAGGCGGGCGT	NA	NA	NA	NA
AVO29281.1|1035949_1036453_-|tail	phage major tail tube protein	tail	A0A193GYM4	Enterobacter_phage	50.6	5.2e-40
AVO29282.1|1036455_1037655_-|tail	phage tail protein	tail	D5LGY7	Escherichia_phage	53.6	1.5e-125
AVO29283.1|1037763_1038348_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29284.1|1038352_1039852_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	57.3	6.9e-72
AVO29285.1|1039859_1040639_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	50.0	3.2e-44
AVO29286.1|1040631_1041528_-|plate	baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	56.8	5.8e-82
AVO29287.1|1041530_1041869_-|plate	phage baseplate protein	plate	A0A193GYY8	Enterobacter_phage	62.2	7.8e-32
AVO29288.1|1041921_1042512_-|plate	phage baseplate assembly protein V	plate	A0A193GYL5	Enterobacter_phage	38.7	7.3e-25
AVO29289.1|1042508_1043063_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29290.1|1043432_1043810_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29291.1|1043806_1044292_-	glycoside hydrolase	NA	D5LH07	Escherichia_phage	54.4	6.0e-41
AVO29292.1|1044288_1044639_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29293.1|1044635_1045085_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29294.1|1045420_1045804_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29295.1|1045958_1046597_-	hypothetical protein	NA	A0A1V0DYI4	Shewanella_phage	41.8	3.4e-20
AVO29296.1|1046637_1046865_-	hypothetical protein	NA	NA	NA	NA	NA
AVO29297.1|1047021_1049358_-|integrase	integrase	integrase	A0A088FVF8	Escherichia_phage	43.5	5.6e-137
1050279:1050294	attR	GCCTGCAGGCGGGCGT	NA	NA	NA	NA
>prophage 3
CP027562	Stenotrophomonas maltophilia strain SJTH1 chromosome, complete genome	4932325	2379278	2422132	4932325	transposase	Salmonella_phage(50.0%)	49	NA	NA
AVO30427.1|2379278_2380331_+|transposase	transposase	transposase	NA	NA	NA	NA
AVO30428.1|2380351_2381092_-	hypothetical protein	NA	NA	NA	NA	NA
AVO30429.1|2381235_2381586_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVO30430.1|2381760_2382180_+	transcriptional regulator	NA	NA	NA	NA	NA
AVO30431.1|2382293_2384162_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AVO30432.1|2384158_2385427_+	copper resistance protein B	NA	NA	NA	NA	NA
AVO30433.1|2385457_2386210_+	cytochrome c	NA	NA	NA	NA	NA
AVO30434.1|2386184_2386739_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AVO30435.1|2386912_2387278_+	DUF411 domain-containing protein	NA	NA	NA	NA	NA
AVO30436.1|2387348_2387699_+	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
AVO30437.1|2387877_2388261_+	copper resistance protein	NA	NA	NA	NA	NA
AVO30438.1|2388271_2389201_+	transporter	NA	NA	NA	NA	NA
AVO30439.1|2389499_2391584_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.2	3.7e-87
AVO30440.1|2391612_2391888_+	hypothetical protein	NA	NA	NA	NA	NA
AVO30441.1|2391962_2392514_+	DUF305 domain-containing protein	NA	NA	NA	NA	NA
AVO32685.1|2392543_2392750_-	formimidoylglutamase	NA	NA	NA	NA	NA
AVO30442.1|2392718_2393108_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AVO30443.1|2393134_2393965_+	DUF4198 domain-containing protein	NA	NA	NA	NA	NA
AVO30444.1|2394069_2397210_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
AVO30445.1|2397206_2398721_-	HlyD family secretion protein	NA	NA	NA	NA	NA
AVO32686.1|2398717_2399917_-	TolC family protein	NA	NA	NA	NA	NA
AVO30446.1|2400095_2400491_-	hypothetical protein	NA	NA	NA	NA	NA
AVO30447.1|2400628_2400892_-	copper chaperone	NA	NA	NA	NA	NA
AVO32687.1|2401207_2401480_+	hypothetical protein	NA	NA	NA	NA	NA
AVO30448.1|2401482_2402424_+	hypothetical protein	NA	NA	NA	NA	NA
AVO30449.1|2402596_2403229_+	hypothetical protein	NA	NA	NA	NA	NA
AVO32688.1|2403317_2403749_+	hypothetical protein	NA	NA	NA	NA	NA
AVO30450.1|2405018_2405477_+	protein tyrosine phosphatase	NA	NA	NA	NA	NA
AVO30451.1|2405791_2406466_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVO30452.1|2406708_2407341_-	hypothetical protein	NA	NA	NA	NA	NA
AVO30453.1|2407670_2407973_-	hypothetical protein	NA	NA	NA	NA	NA
AVO30454.1|2407992_2408193_+	hypothetical protein	NA	NA	NA	NA	NA
AVO30455.1|2408189_2411156_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	98.8	0.0e+00
AVO30456.1|2411159_2411720_-|transposase	transposase	transposase	A0A1B0V7I5	Salmonella_phage	99.2	1.9e-59
AVO30457.1|2411708_2411921_+	hypothetical protein	NA	A0A1B0V7I9	Salmonella_phage	84.3	3.8e-16
AVO30458.1|2411957_2412392_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AVO30459.1|2412463_2412814_+	mercuric transport protein	NA	NA	NA	NA	NA
AVO30460.1|2412829_2413105_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
AVO32689.1|2413181_2413760_+	sel1 repeat family protein	NA	NA	NA	NA	NA
AVO32690.1|2413768_2414191_+	mercury transport protein MerC	NA	NA	NA	NA	NA
AVO30461.1|2414229_2415915_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.7	2.7e-40
AVO30462.1|2415929_2416568_+	alkylmercury lyase	NA	NA	NA	NA	NA
AVO30463.1|2416679_2417045_+	transcriptional regulator	NA	NA	NA	NA	NA
AVO30464.1|2417041_2417278_+	mercury resistance protein	NA	NA	NA	NA	NA
AVO30465.1|2417293_2417614_+	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
AVO30466.1|2417652_2418267_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.0	5.1e-37
AVO30467.1|2418327_2419545_-|transposase	transposase	transposase	NA	NA	NA	NA
AVO30468.1|2419541_2420450_-|transposase	transposase	transposase	NA	NA	NA	NA
AVO30469.1|2420452_2422132_-|transposase	transposase	transposase	NA	NA	NA	NA
