The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027105	Escherichia coli strain RM14721 chromosome, complete genome	4620018	426656	550009	4620018	tRNA,transposase,protease,plate,integrase	Stx2-converting_phage(22.22%)	114	494911:494926	526888:526903
AVP28105.1|426656_428174_-|tRNA	lysine--tRNA ligase heat inducible	tRNA	A0A1V0SAC0	Catovirus	38.0	2.7e-87
AVP28106.1|428410_429868_-	dipeptide and tripeptide permease C	NA	A0A0P0IY73	Acinetobacter_phage	29.4	6.8e-48
AVP28107.1|429926_432074_-	lysine decarboxylase CadA	NA	NA	NA	NA	NA
AVP28108.1|432153_433488_-	cadaverine/lysine antiporter	NA	NA	NA	NA	NA
AVP28109.1|433717_433963_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28110.1|433853_435392_-	transcriptional regulator	NA	NA	NA	NA	NA
AVP28111.1|435678_435897_+	hypothetical protein	NA	NA	NA	NA	NA
AVP31928.1|438729_438927_-	DUF957 domain-containing protein	NA	NA	NA	NA	NA
AVP28112.1|439148_439526_-	toxin	NA	NA	NA	NA	NA
AVP28113.1|439615_439984_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
AVP28114.1|440033_440678_-	antitoxin of toxin-antitoxin stability system	NA	A0A2I6PI07	Pseudomonas_phage	33.8	5.9e-28
AVP28115.1|440696_440918_-	DUF987 domain-containing protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
AVP31927.1|440986_441433_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28116.1|441478_441964_-	antirestriction protein	NA	NA	NA	NA	NA
AVP28117.1|442055_442874_-	DUF945 domain-containing protein	NA	A0A2C9CX26	Yersinia_phage	39.0	4.7e-46
AVP28118.1|442972_443206_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
AVP28119.1|443211_443889_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28120.1|444007_444892_-	GTPase	NA	NA	NA	NA	NA
AVP28121.1|445005_445965_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28122.1|446021_446825_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28123.1|446918_447221_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28124.1|448926_449658_+	inovirus Gp2 family protein	NA	NA	NA	NA	NA
AVP28125.1|450016_450577_+	hypothetical protein	NA	NA	NA	NA	NA
AVP31929.1|450645_450879_+	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
AVP28126.1|451479_452280_-	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	98.5	6.2e-144
AVP28127.1|452276_453449_-|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	99.2	2.0e-228
AVP31930.1|453566_453782_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28128.1|453870_454494_+	DNA-binding protein	NA	NA	NA	NA	NA
AVP31931.1|454590_454824_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28129.1|454843_455056_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
AVP28130.1|455250_455451_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28131.1|455562_456060_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AVP28132.1|456081_457626_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AVP28133.1|457641_458979_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AVP28134.1|458975_459629_+	type VI secretion system protein ImpK	NA	NA	NA	NA	NA
AVP28135.1|459631_461362_+	cell envelope biogenesis protein OmpA	NA	NA	NA	NA	NA
AVP28136.1|461367_461859_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AVP28137.1|462027_464715_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.7	1.5e-93
AVP28138.1|464701_465343_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28139.1|465645_468165_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
AVP28140.1|468161_469844_+	type VI secretion protein	NA	NA	NA	NA	NA
AVP28141.1|469863_470541_+	DUF2931 domain-containing protein	NA	NA	NA	NA	NA
AVP28142.1|470684_471362_+	DUF2931 domain-containing protein	NA	NA	NA	NA	NA
AVP28143.1|471393_471660_+	PAAR domain-containing protein	NA	E5E3Y0	Burkholderia_phage	39.0	6.9e-07
AVP28144.1|471663_472812_+	type VI secretion protein	NA	NA	NA	NA	NA
AVP28145.1|472804_476194_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
AVP28146.1|476193_477792_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AVP28147.1|477793_478486_+	type VI secretion protein	NA	NA	NA	NA	NA
AVP28148.1|478493_480257_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AVP28149.1|480211_481312_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AVP28150.1|481292_481829_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AVP28151.1|481831_482281_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AVP31932.1|482347_482653_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28152.1|482707_484072_+	hypothetical protein	NA	NA	NA	NA	NA
AVP31933.1|485179_487348_+	DUF2726 domain-containing protein	NA	NA	NA	NA	NA
AVP28153.1|488108_489722_-|transposase	IS66 family transposase ISEc23	transposase	A0A0P0ZEB3	Stx2-converting_phage	63.6	3.0e-182
AVP28154.1|489752_490103_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	66.4	4.7e-40
AVP28155.1|490099_490525_-	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	99.0	1.5e-48
AVP28156.1|490612_491038_+	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	99.0	1.5e-48
AVP28157.1|491034_491385_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	66.4	4.7e-40
AVP28158.1|491415_493029_+|transposase	IS66 family transposase ISEc23	transposase	A0A0P0ZEB3	Stx2-converting_phage	63.6	3.0e-182
AVP28159.1|493299_493647_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
AVP28160.1|493695_495234_+|transposase	IS66-like element ISEc22 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	99.2	3.7e-294
494911:494926	attL	GAACTGGCGAAAGCGT	NA	NA	NA	NA
AVP31934.1|495377_495647_+	PerC family transcriptional regulator	NA	NA	NA	NA	NA
AVP28161.1|495667_496312_+	hypothetical protein	NA	NA	NA	NA	NA
AVP31935.1|496749_496938_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28162.1|497400_498903_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28163.1|498859_499984_-	DNA (cytosine-5-)-methyltransferase	NA	A0A191SB20	Nostoc_phage	30.3	4.6e-36
AVP28164.1|500483_500690_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28165.1|503581_503752_-|integrase	integrase	integrase	NA	NA	NA	NA
AVP31936.1|503990_504737_+	adhesin	NA	NA	NA	NA	NA
AVP28166.1|504911_506414_+	phosphoethanolamine transferase	NA	NA	NA	NA	NA
AVP28167.1|506678_507941_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	38.3	1.2e-77
AVP28168.1|508320_508896_-	transcriptional regulator	NA	NA	NA	NA	NA
AVP28169.1|508932_510630_-	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
AVP28170.1|510605_510944_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
AVP28171.1|511059_512361_-	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA	NA
AVP28172.1|512478_513915_-	aspartate ammonia-lyase	NA	NA	NA	NA	NA
AVP28173.1|514251_514728_+	membrane protein FxsA	NA	NA	NA	NA	NA
AVP28174.1|514743_516000_-	amino acid permease	NA	NA	NA	NA	NA
AVP28175.1|516275_516569_+	co-chaperone GroES	NA	K4F9I2	Cronobacter_phage	45.4	9.2e-13
AVP28176.1|516612_518259_+	molecular chaperone GroEL	NA	A0A2I7SAK5	Vibrio_phage	68.9	5.3e-190
AVP28177.1|518396_518750_+	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
AVP28178.1|518942_519812_-	hypothetical protein	NA	NA	NA	NA	NA
AVP28179.1|520206_521235_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA	NA
AVP28180.1|521276_521843_+	elongation factor P	NA	NA	NA	NA	NA
AVP28181.1|521894_522020_+	entericidin A	NA	NA	NA	NA	NA
AVP28182.1|522130_522277_+	entericidin B	NA	NA	NA	NA	NA
AVP28183.1|522458_522776_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA	NA
AVP28184.1|522772_523306_-	hypothetical protein	NA	A0A1W6JNX6	Morganella_phage	55.0	2.7e-47
AVP28185.1|523394_524528_-	BlaEC family class C beta-lactamase	NA	NA	NA	NA	NA
AVP28186.1|524590_524950_-	fumarate reductase subunit D	NA	NA	NA	NA	NA
AVP28187.1|524960_525356_-	fumarate reductase subunit C	NA	NA	NA	NA	NA
AVP28188.1|525366_526101_-	fumarate reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AVP28189.1|526093_527902_-	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA	NA
526888:526903	attR	ACGCTTTCGCCAGTTC	NA	NA	NA	NA
AVP28190.1|528226_529204_+	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9KZX5	Tupanvirus	28.2	6.8e-28
AVP28191.1|529422_530925_+	inner membrane transporter YjeM	NA	NA	NA	NA	NA
AVP28192.1|530976_531291_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28193.1|531287_531602_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28194.1|531630_534954_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA	NA
AVP28195.1|534975_535944_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AVP28196.1|536040_537093_-	ribosome small subunit-dependent GTPase	NA	NA	NA	NA	NA
AVP28197.1|537187_537733_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	40.4	2.2e-28
AVP31937.1|538596_538650_+	hypothetical protein	NA	NA	NA	NA	NA
AVP28198.1|538632_539772_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AVP28199.1|539770_541318_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AVP28200.1|541289_541751_+|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	tRNA	NA	NA	NA	NA
AVP28201.1|541769_543107_+	N-acetylmuramoyl-L-alanine amidase AmiB	NA	A0A067ZJB6	Vibrio_phage	31.0	8.8e-18
AVP28202.1|543116_544964_+	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.3	4.4e-60
AVP28203.1|544956_545907_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AVP28204.1|545992_546301_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AVP28205.1|546376_547657_+	GTPase HflX	NA	NA	NA	NA	NA
AVP28206.1|547742_549002_+|protease	protease modulator HflK	protease	A0A1L2CVV0	Pectobacterium_phage	25.5	3.6e-05
AVP28207.1|549004_550009_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 2
CP027105	Escherichia coli strain RM14721 chromosome, complete genome	4620018	1514523	1538318	4620018	lysis,integrase	Enterobacteria_phage(48.65%)	41	1507665:1507679	1542668:1542682
1507665:1507679	attL	CTGGAAGATGGCCTG	NA	NA	NA	NA
AVP29059.1|1514523_1515594_-|integrase	integrase	integrase	K7P6P6	Enterobacteria_phage	100.0	3.9e-202
AVP29060.1|1515571_1515790_-	excisionase	NA	Q77WA4	Escherichia_phage	100.0	3.7e-35
AVP29061.1|1515829_1515997_-	hypothetical protein	NA	A0A0K2FJ46	Enterobacteria_phage	98.2	1.3e-27
AVP29062.1|1516085_1516367_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29063.1|1516481_1517279_-	DUF550 domain-containing protein	NA	A0A075B8H2	Enterobacteria_phage	41.1	5.7e-49
AVP29064.1|1517289_1518045_-	hypothetical protein	NA	A0A1R3Y5Q7	Salmonella_virus	92.4	5.5e-142
AVP29065.1|1518046_1518454_-	hypothetical protein	NA	A0A125RPT9	Escherichia_phage	97.8	2.8e-68
AVP29066.1|1518450_1518672_-	conjugal transfer protein TraR	NA	A0A1I9LJM6	Stx_converting_phage	98.6	6.4e-35
AVP29067.1|1518770_1519052_-	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
AVP29068.1|1519062_1519254_-	hypothetical protein	NA	A0A0P0ZC67	Stx2-converting_phage	100.0	7.3e-27
AVP31973.1|1519226_1519409_-	DUF1317 domain-containing protein	NA	A0A0N7CHV0	Escherichia_phage	96.7	2.8e-28
AVP29069.1|1519405_1520086_-	exonuclease	NA	A0A0P0ZCD4	Stx2-converting_phage	100.0	1.6e-132
AVP29070.1|1520082_1520868_-	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
AVP29071.1|1520873_1521290_-	Host-nuclease inhibitor protein gam	NA	C6ZCV5	Enterobacteria_phage	97.1	2.8e-71
AVP29072.1|1521244_1521514_-	host cell division inhibitory peptide Kil	NA	G3CFI2	Escherichia_phage	98.9	6.6e-42
AVP29073.1|1521593_1521962_-	DUF2528 domain-containing protein	NA	K7PGR6	Enterobacteria_phage	97.5	6.5e-64
AVP29074.1|1522149_1523031_-	hypothetical protein	NA	NA	NA	NA	NA
AVP31974.1|1523027_1523351_-	antitermination protein	NA	A4KWR8	Enterobacteria_phage	94.3	1.4e-49
AVP29075.1|1523703_1524108_-	hypothetical protein	NA	Q716D7	Shigella_phage	96.3	1.8e-67
AVP29076.1|1524104_1524737_-	LexA family transcriptional repressor	NA	K7P850	Enterobacteria_phage	99.5	1.6e-118
AVP29077.1|1524844_1525060_+	XRE family transcriptional regulator	NA	Q716D6	Shigella_phage	100.0	1.4e-31
AVP29078.1|1525179_1525473_+	hypothetical protein	NA	A2SY75	Escherichia_phage	99.0	1.4e-45
AVP29079.1|1525505_1526405_+	Replication protein O	NA	M1FN81	Enterobacteria_phage	99.0	1.0e-171
AVP29080.1|1526401_1527103_+	Replication protein P	NA	K7P6G2	Enterobacteria_phage	99.6	1.9e-128
AVP29081.1|1527099_1527390_+	protein ren	NA	A0A1I9LJP5	Stx_converting_phage	100.0	9.6e-47
AVP29082.1|1527445_1527904_+	recombination protein NinB	NA	M1FPM8	Enterobacteria_phage	100.0	1.6e-80
AVP29083.1|1527900_1528428_+	phage N-6-adenine-methyltransferase	NA	A0A1I9LJP9	Stx_converting_phage	100.0	9.5e-101
AVP29084.1|1528424_1528601_+	NinE family protein	NA	K7PHE6	Enterobacteria_phage	98.3	1.4e-27
AVP29085.1|1528561_1528945_+	DUF2591 domain-containing protein	NA	Q76H72	Enterobacteria_phage	96.5	1.7e-62
AVP29086.1|1529151_1529514_+	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	96.6	1.5e-60
AVP29087.1|1529510_1529651_+	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	72.1	1.7e-09
AVP29088.1|1529736_1530120_+	antitermination protein Q	NA	A0A088CD47	Shigella_phage	82.5	1.7e-54
AVP29089.1|1530309_1531407_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	76.5	2.2e-155
AVP29090.1|1531979_1532195_+|lysis	lysis protein S	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
AVP29091.1|1532194_1532692_+	lysozyme	NA	M1FJA0	Enterobacteria_phage	97.0	1.2e-89
AVP29092.1|1532908_1533094_+	hypothetical protein	NA	K7PHU6	Enterobacteria_phage	96.5	3.6e-15
AVP29093.1|1533290_1534748_+	Trk system potassium uptake protein TrkG	NA	NA	NA	NA	NA
AVP29094.1|1534686_1534968_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29095.1|1534885_1535677_+	transcriptional regulator	NA	F8J155	Lactobacillus_virus	40.5	7.0e-47
AVP29096.1|1535669_1536272_+	hypothetical protein	NA	A0A1B1INP7	uncultured_Mediterranean_phage	52.7	1.1e-52
AVP29097.1|1537028_1538318_-	adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA	NA	A0A1V0SKB7	Klosneuvirus	27.5	5.3e-20
1542668:1542682	attR	CTGGAAGATGGCCTG	NA	NA	NA	NA
>prophage 3
CP027105	Escherichia coli strain RM14721 chromosome, complete genome	4620018	1618274	1686035	4620018	plate,tail,capsid,protease,head,portal,integrase	Salmonella_phage(66.04%)	82	1611559:1611573	1672874:1672888
1611559:1611573	attL	TTTTTCTTCCACCAG	NA	NA	NA	NA
AVP29169.1|1618274_1619306_-|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	56.1	1.9e-105
AVP29170.1|1619494_1619686_-	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	65.9	6.8e-09
AVP29171.1|1619701_1620271_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	43.9	2.9e-39
AVP29172.1|1620396_1620618_+	regulator	NA	NA	NA	NA	NA
AVP29173.1|1620650_1621160_+	hypothetical protein	NA	E5G6L3	Salmonella_phage	98.2	1.3e-86
AVP31978.1|1621167_1621368_+	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	98.5	7.1e-33
AVP29174.1|1621331_1621673_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	95.6	5.6e-54
AVP29175.1|1621740_1621974_+	DUF2732 domain-containing protein	NA	E5G6L6	Salmonella_phage	96.1	9.2e-32
AVP29176.1|1621973_1622201_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	98.7	7.8e-36
AVP29177.1|1622197_1623055_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.5	1.6e-161
AVP29178.1|1623051_1625466_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	98.0	0.0e+00
AVP29179.1|1625620_1625809_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	96.8	1.6e-26
AVP29180.1|1625747_1626053_+	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
AVP29181.1|1626112_1626844_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29182.1|1627129_1628521_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29183.1|1628548_1629574_-|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	89.1	2.9e-170
AVP29184.1|1629573_1631340_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	99.7	0.0e+00
AVP29185.1|1631482_1632316_+|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	91.0	2.8e-123
AVP29186.1|1632332_1633391_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.4	3.8e-181
AVP29187.1|1633394_1634045_+	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
AVP29188.1|1634140_1634605_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.6	6.4e-77
AVP29189.1|1634604_1634808_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
AVP29190.1|1634811_1635027_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
AVP31979.1|1635046_1635520_+	lysozyme	NA	E5G6N1	Salmonella_phage	91.0	3.7e-80
AVP29191.1|1635521_1635899_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
AVP29192.1|1635895_1636324_+	hypothetical protein	NA	E5G6N2	Salmonella_phage	78.0	9.9e-48
AVP29193.1|1636253_1636457_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	79.1	4.7e-24
AVP29194.1|1636419_1636851_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	92.3	1.1e-70
AVP29195.1|1636843_1637290_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	86.3	2.3e-63
AVP29196.1|1637358_1637937_+|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	87.0	9.4e-94
AVP29197.1|1637933_1638293_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	86.6	9.5e-52
AVP29198.1|1638279_1639188_+|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	90.4	7.8e-143
AVP29199.1|1639180_1639786_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	92.0	9.8e-110
AVP29200.1|1639782_1641303_+|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	70.9	3.2e-197
AVP31980.1|1641302_1641905_+|tail	phage tail protein	tail	M1SV83	Escherichia_phage	89.0	4.3e-97
AVP29201.1|1641876_1642320_-|tail	phage tail protein	tail	A0A0F7LDZ0	Escherichia_phage	49.0	6.9e-36
AVP31981.1|1642322_1642814_-	hypothetical protein	NA	F1BUP1	Erwinia_phage	35.3	8.2e-06
AVP29202.1|1642844_1643411_+	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	88.5	5.3e-89
AVP29203.1|1643553_1644726_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	4.6e-204
AVP29204.1|1644735_1645251_+|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.3	2.1e-89
AVP29205.1|1645305_1645608_+|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	91.0	3.7e-41
AVP29206.1|1645622_1645742_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AVP29207.1|1645734_1648812_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	61.6	0.0e+00
AVP29208.1|1648808_1649294_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.6	3.7e-67
AVP29209.1|1649290_1650391_+	late control protein D	NA	A0A1S6KZZ5	Salmonella_phage	87.2	1.4e-175
AVP29210.1|1650481_1650700_+	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AVP29211.1|1650935_1652621_-	transporter	NA	NA	NA	NA	NA
AVP29212.1|1652890_1653268_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29213.1|1653297_1653555_-	glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	61.9	8.6e-23
AVP29214.1|1653714_1654002_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29215.1|1653985_1654708_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AVP29216.1|1654768_1655671_+	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	34.4	2.6e-37
AVP29217.1|1655758_1656235_+	YbjN domain-containing protein	NA	NA	NA	NA	NA
AVP29218.1|1656440_1656602_+	putrescine/spermidine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVP29219.1|1656585_1657698_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
AVP29220.1|1657792_1658926_+	putrescine transport ATP-binding protein PotG	NA	G3M9Y6	Bacillus_virus	34.0	1.4e-29
AVP29221.1|1658935_1659889_+	putrescine ABC transporter permease	NA	NA	NA	NA	NA
AVP29222.1|1659885_1660731_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AVP29223.1|1660790_1661279_+	DUF2593 domain-containing protein	NA	NA	NA	NA	NA
AVP29224.1|1661319_1662447_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	27.0	6.0e-28
AVP29225.1|1662645_1663377_-	ABC transporter arginine-binding protein 1	NA	NA	NA	NA	NA
AVP29226.1|1663667_1664336_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
AVP29227.1|1664335_1665052_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
AVP29228.1|1665058_1665790_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVP29229.1|1665807_1666536_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	36.7	6.0e-29
AVP29230.1|1666753_1667269_-	lipoprotein	NA	NA	NA	NA	NA
AVP29231.1|1667394_1667718_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29232.1|1667714_1668545_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	30.0	5.7e-07
AVP31982.1|1668541_1669555_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AVP29233.1|1669653_1671084_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AVP29234.1|1671094_1672096_-	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
AVP29235.1|1672132_1673851_-	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.0	5.2e-31
1672874:1672888	attR	TTTTTCTTCCACCAG	NA	NA	NA	NA
AVP29236.1|1673983_1674952_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AVP29237.1|1674963_1676616_-	hydroxylamine reductase	NA	NA	NA	NA	NA
AVP29238.1|1676759_1677659_-	transporter	NA	NA	NA	NA	NA
AVP29239.1|1678153_1678849_-	aquaporin	NA	NA	NA	NA	NA
AVP29240.1|1679274_1680933_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AVP29241.1|1680929_1681922_-	DUF535 domain-containing protein	NA	NA	NA	NA	NA
AVP29242.1|1682036_1683152_+	MacA family efflux pump subunit	NA	NA	NA	NA	NA
AVP29243.1|1683148_1685095_+	macrolide ABC transporter permease/ATP-binding protein MacB	NA	G9BWD6	Planktothrix_phage	40.1	1.1e-37
AVP29244.1|1685167_1685392_-	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	2.3e-16
AVP29245.1|1685714_1686035_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
>prophage 4
CP027105	Escherichia coli strain RM14721 chromosome, complete genome	4620018	2290818	2398856	4620018	terminase,transposase,coat,tail,lysis,capsid,head,portal,integrase	Enterobacteria_phage(35.48%)	122	2367270:2367285	2403552:2403567
AVP29777.1|2290818_2292147_-|coat	phage coat protein	coat	NA	NA	NA	NA
AVP29778.1|2292202_2292478_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29779.1|2292771_2293107_-	type II/III secretion system domain protein	NA	NA	NA	NA	NA
AVP29780.1|2295089_2295287_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29781.1|2295424_2295637_+	hypothetical protein	NA	A0A0N9HH59	Vibrio_phage	66.7	6.6e-13
AVP29782.1|2296263_2297586_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AVP29783.1|2297585_2297852_-	transcriptional regulator	NA	NA	NA	NA	NA
AVP32012.1|2298074_2299475_-	outer membrane autotransporter barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	49.2	4.0e-106
AVP29784.1|2303360_2304057_+|transposase	IS1 family transposase	transposase	A0A077SLN4	Escherichia_phage	98.3	1.4e-131
AVP29785.1|2304548_2306141_-	autoinducer-2 kinase	NA	NA	NA	NA	NA
AVP29786.1|2306219_2307173_-	transcriptional regulator LsrR	NA	NA	NA	NA	NA
AVP29787.1|2307421_2308957_+	autoinducer 2 ABC transporter ATP-binding protein LsrA	NA	A0A2H4PQG7	Staphylococcus_phage	24.0	9.4e-16
AVP29788.1|2308950_2309979_+	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA	NA
AVP29789.1|2309978_2310971_+	autoinducer 2 ABC transporter permease LsrD	NA	NA	NA	NA	NA
AVP29790.1|2310982_2312005_+	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA	NA
AVP29791.1|2312031_2312907_+	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA	NA
AVP29792.1|2312930_2313221_+	autoinducer 2-degrading protein LsrG	NA	NA	NA	NA	NA
AVP29793.1|2313277_2314036_+	trans-aconitate 2-methyltransferase	NA	NA	NA	NA	NA
AVP29794.1|2314039_2314954_-	hypothetical protein	NA	NA	NA	NA	NA
AVP32013.1|2314903_2315104_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29795.1|2315160_2316612_-	tagaturonate reductase	NA	NA	NA	NA	NA
AVP29796.1|2316756_2316888_-	diguanylate cyclase	NA	NA	NA	NA	NA
AVP32014.1|2316838_2317786_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.1	1.3e-18
AVP29797.1|2318394_2318754_-	DUF4186 domain-containing protein	NA	NA	NA	NA	NA
AVP29798.1|2318753_2319680_-	glutaminase	NA	NA	NA	NA	NA
AVP29799.1|2319743_2321132_-	succinate semialdehyde dehydrogenase [NAD(P)+] Sad	NA	NA	NA	NA	NA
AVP29800.1|2321232_2322114_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVP29801.1|2322191_2323307_+	putative protein YneK	NA	NA	NA	NA	NA
AVP29802.1|2323456_2324647_+	sugar efflux transporter	NA	NA	NA	NA	NA
AVP29803.1|2324671_2325337_-	stress protection protein MarC	NA	NA	NA	NA	NA
AVP29804.1|2325457_2325742_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVP29805.1|2325731_2326052_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	Q6UAT3	Klebsiella_phage	42.3	7.2e-19
AVP29806.1|2326271_2326706_+	multiple antibiotic resistance transcriptional regulator MarR	NA	NA	NA	NA	NA
AVP29807.1|2326726_2327110_+	MDR efflux pump AcrAB transcriptional activator MarA	NA	D0R0F8	Streptococcus_phage	32.3	4.7e-09
AVP29808.1|2327141_2327360_+	multiple antibiotic resistance protein MarB	NA	NA	NA	NA	NA
AVP29809.1|2327390_2328290_-	O-acetylserine/cysteine exporter	NA	NA	NA	NA	NA
AVP29810.1|2328484_2329672_+	transporter	NA	NA	NA	NA	NA
AVP29811.1|2329798_2329894_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29812.1|2330112_2331003_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.7	6.2e-20
AVP29813.1|2331257_2331650_-	TIGR00156 family protein	NA	NA	NA	NA	NA
AVP29814.1|2331927_2332446_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29815.1|2332489_2334535_-	peptidyl-dipeptidase Dcp	NA	NA	NA	NA	NA
AVP29816.1|2334671_2335418_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AVP29817.1|2335506_2336193_+	transcriptional regulator	NA	NA	NA	NA	NA
AVP29818.1|2336369_2336573_+	protein YdfZ	NA	J9Q802	Salmonella_phage	55.2	1.6e-11
AVP29819.1|2336607_2338068_-	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	29.6	2.5e-42
AVP29820.1|2338156_2339440_-	MFS transporter	NA	NA	NA	NA	NA
AVP29821.1|2340226_2340460_+	hypothetical protein	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
AVP29822.1|2340776_2341367_+	DNA invertase	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
AVP29823.1|2341464_2342040_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	95.3	6.5e-103
AVP29824.1|2342039_2345114_-|tail	phage tail protein	tail	U5N099	Enterobacteria_phage	82.1	2.5e-68
AVP29825.1|2345848_2349262_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	97.6	0.0e+00
AVP29826.1|2349321_2349993_-|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	99.1	1.2e-103
AVP29827.1|2349890_2350634_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.8	6.6e-148
AVP29828.1|2350639_2351338_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	94.4	7.1e-128
AVP29829.1|2351337_2351667_-|tail	phage tail protein	tail	A0A0K2FIE9	Enterobacteria_phage	97.2	8.9e-57
AVP29830.1|2351663_2354243_-|tail	phage tail tape measure protein	tail	A0A2R9YJM8	Escherichia_phage	93.7	0.0e+00
AVP29831.1|2354235_2354670_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	99.2	1.5e-64
AVP29832.1|2354651_2355074_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	96.4	3.1e-70
AVP32015.1|2355089_2355830_-|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	97.6	2.3e-129
AVP29833.1|2355837_2356233_-|tail	phage tail protein	tail	A0A2R9YJI2	Escherichia_phage	99.2	2.9e-70
AVP29834.1|2356229_2356808_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	99.5	5.9e-80
AVP29835.1|2356819_2357173_-|tail	phage tail protein	tail	A0A2R9YJJ5	Escherichia_phage	98.3	4.4e-62
AVP29836.1|2357184_2357583_-	DNA-packaging protein FI	NA	A0A0K2FIR1	Enterobacteria_phage	98.5	1.3e-62
AVP29837.1|2357624_2358650_-|capsid	minor capsid protein E	capsid	C6ZCY2	Enterobacteria_phage	99.4	6.0e-192
AVP29838.1|2358705_2359038_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	99.1	3.8e-55
AVP29839.1|2359047_2360367_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	99.3	2.5e-235
AVP29840.1|2360347_2361949_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	99.6	5.9e-311
AVP29841.1|2361945_2362152_-|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
AVP29842.1|2362148_2364074_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.4	0.0e+00
AVP29843.1|2364048_2364594_-|terminase	terminase small subunit	terminase	A0A0K2FIG2	Enterobacteria_phage	98.3	2.3e-94
AVP29844.1|2364733_2364835_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29845.1|2364982_2365216_+	DUF3950 domain-containing protein	NA	A0A0K2FIR8	Escherichia_phage	84.1	2.5e-21
AVP29846.1|2365273_2365684_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	79.4	2.5e-56
AVP29847.1|2365835_2366009_-	protein GnsB	NA	NA	NA	NA	NA
AVP29848.1|2366180_2366336_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29849.1|2366482_2366671_-	cold-shock protein	NA	NA	NA	NA	NA
AVP29850.1|2366681_2366894_-	cold-shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
AVP29851.1|2367256_2367754_-	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
2367270:2367285	attL	TTTTTATCTCTTAAAG	NA	NA	NA	NA
AVP29852.1|2367750_2368284_-	lysozyme from lambdoid prophage Qin	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
AVP29853.1|2368619_2369045_+	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	99.0	1.5e-48
AVP29854.1|2369041_2369392_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	66.4	4.7e-40
AVP29855.1|2369422_2371036_+|transposase	IS66 family transposase ISEc23	transposase	A0A0P0ZEB3	Stx2-converting_phage	63.6	3.0e-182
AVP29856.1|2371136_2371352_-|lysis	lysis protein S	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
AVP29857.1|2372105_2372321_-	cold-shock protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	3.4e-25
AVP29858.1|2372621_2372834_+	cold-shock protein CspF	NA	NA	NA	NA	NA
AVP29859.1|2373255_2374008_-	antitermination protein Q	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
AVP29860.1|2374021_2375071_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.3	1.3e-112
AVP29861.1|2375072_2375351_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29862.1|2375417_2375669_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29863.1|2375885_2376041_-	protein HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
AVP29864.1|2376112_2376400_-	mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
AVP29865.1|2376399_2376639_-	antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
AVP29866.1|2376663_2376969_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29867.1|2377171_2377504_+	protein FlxA	NA	NA	NA	NA	NA
AVP29868.1|2377773_2377896_-	plasmid mobilization protein	NA	NA	NA	NA	NA
AVP29869.1|2377940_2379254_-|transposase	transposase	transposase	NA	NA	NA	NA
AVP29870.1|2379431_2379614_+	hypothetical protein	NA	Q7Y2Q9	Escherichia_phage	74.5	6.3e-12
AVP29871.1|2379588_2379768_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29872.1|2380920_2381277_-	class I SAM-dependent methyltransferase	NA	H9C170	Pectobacterium_phage	69.6	1.6e-38
AVP29873.1|2381417_2382631_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	98.0	5.1e-166
AVP29874.1|2383049_2384069_-	hypothetical protein	NA	U5P0A0	Shigella_phage	60.2	2.4e-55
AVP29875.1|2383995_2384517_-	hypothetical protein	NA	NA	NA	NA	NA
AVP29876.1|2384500_2384731_-	division inhibition gene dicB repressor	NA	NA	NA	NA	NA
AVP29877.1|2384814_2385222_+	transcriptional regulator	NA	K7PM82	Enterobacteria_phage	54.7	4.4e-13
AVP29878.1|2385388_2385544_+	DUF1391 domain-containing protein	NA	M4QQ57	Salicola_phage	53.2	3.0e-07
AVP29879.1|2385503_2385674_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29880.1|2385703_2385922_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29881.1|2386489_2386678_+	division inhibition protein DicB	NA	NA	NA	NA	NA
AVP29882.1|2386674_2386866_+	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
AVP29883.1|2386958_2389430_+	exonuclease	NA	A0A192Y6E0	Salmonella_phage	56.7	8.5e-59
AVP29884.1|2389502_2389754_+	DNA-binding protein	NA	S4TND0	Salmonella_phage	50.0	2.2e-15
AVP29885.1|2389773_2391069_+|integrase	site-specific integrase	integrase	B6DZ48	Enterobacteria_phage	62.1	3.3e-155
AVP29886.1|2391088_2391199_-	transporter	NA	NA	NA	NA	NA
AVP29887.1|2391256_2392276_-	starvation-sensing protein RspB	NA	E3SJ82	Synechococcus_phage	26.2	4.3e-17
AVP29888.1|2392287_2393502_-	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
AVP29889.1|2393707_2394034_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
AVP29890.1|2394168_2394510_+	hypothetical protein	NA	NA	NA	NA	NA
AVP29891.1|2394544_2395105_+	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
AVP32016.1|2395107_2395818_-	YnfC family lipoprotein	NA	NA	NA	NA	NA
AVP29892.1|2395925_2396231_+	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
AVP29893.1|2396429_2398856_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.2	7.7e-214
2403552:2403567	attR	TTTTTATCTCTTAAAG	NA	NA	NA	NA
>prophage 5
CP027105	Escherichia coli strain RM14721 chromosome, complete genome	4620018	2966504	2975945	4620018		Enterobacteria_phage(85.71%)	10	NA	NA
AVP30408.1|2966504_2967641_+	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.7	1.9e-162
AVP30409.1|2967637_2969638_+	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	96.1	0.0e+00
AVP30410.1|2969762_2970224_+	hypothetical protein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
AVP30411.1|2970263_2970734_-	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	100.0	5.2e-82
AVP30412.1|2970780_2971500_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AVP30413.1|2971496_2973182_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
AVP30414.1|2973403_2974135_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
AVP30415.1|2974194_2974302_+	hypothetical protein	NA	NA	NA	NA	NA
AVP30416.1|2974282_2975014_-	osmoprotectant uptake system permease	NA	NA	NA	NA	NA
AVP30417.1|2975018_2975945_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.8	5.7e-08
>prophage 6
CP027105	Escherichia coli strain RM14721 chromosome, complete genome	4620018	3573826	3587009	4620018		Escherichia_phage(50.0%)	12	NA	NA
AVP30941.1|3573826_3576388_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	1.3e-30
AVP30942.1|3576493_3577150_+	serine/threonine protein phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	6.2e-49
AVP30943.1|3577200_3577968_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	7.4e-70
AVP30944.1|3578163_3579072_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.9	3.0e-118
AVP30945.1|3579068_3580331_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	1.7e-135
AVP30946.1|3580327_3580966_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	8.3e-83
AVP30947.1|3580970_3581747_+	hypothetical protein	NA	NA	NA	NA	NA
AVP30948.1|3581835_3583200_+	GntP family transporter	NA	NA	NA	NA	NA
AVP30949.1|3583293_3584286_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
AVP30950.1|3584348_3585488_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
AVP30951.1|3585627_3586254_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
AVP30952.1|3586247_3587009_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
>prophage 1
CP027106	Escherichia coli strain RM14721 plasmid pRM14721, complete sequence	106432	5444	68063	106432	transposase	Escherichia_phage(18.75%)	58	NA	NA
AVP32104.1|5444_9356_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	34.6	6.2e-112
AVP32105.1|9451_9823_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AVP32106.1|10038_10809_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AVP32189.1|11371_11767_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	99.2	1.7e-65
AVP32107.1|11833_12856_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.1	1.3e-199
AVP32108.1|12852_13635_+|transposase	transposase	transposase	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AVP32109.1|13707_14055_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AVP32110.1|14104_15643_+|transposase	IS66-like element ISEc8 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	99.4	1.4e-298
AVP32111.1|16988_17810_-	prepilin peptidase	NA	NA	NA	NA	NA
AVP32112.1|17812_18859_-	pilus biosynthesis protein	NA	NA	NA	NA	NA
AVP32113.1|18872_19898_-	type II secretion protein F	NA	NA	NA	NA	NA
AVP32190.1|19881_21216_-	pilus assembly protein	NA	NA	NA	NA	NA
AVP32114.1|21413_21899_-	lngG	NA	NA	NA	NA	NA
AVP32115.1|21886_22714_-	pilus assembly protein	NA	NA	NA	NA	NA
AVP32191.1|22715_22970_-	pilus assembly protein	NA	NA	NA	NA	NA
AVP32116.1|23277_24735_-	type II and III secretion system protein	NA	NA	NA	NA	NA
AVP32117.1|24752_25166_-	pilus assembly protein	NA	NA	NA	NA	NA
AVP32118.1|25182_26754_-	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AVP32192.1|26821_27445_-	pilus assembly protein	NA	Q8LTI3	Vibrio_virus	35.2	1.7e-16
AVP32119.1|27835_28279_-	lytic transglycosylase	NA	NA	NA	NA	NA
AVP32193.1|28291_29143_-	transcriptional regulator HilD	NA	NA	NA	NA	NA
AVP32120.1|29435_29738_-	transcriptional regulator	NA	NA	NA	NA	NA
AVP32121.1|31162_32089_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32122.1|33178_35158_+	Tat pathway signal protein	NA	NA	NA	NA	NA
AVP32123.1|35432_36776_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
AVP32124.1|37706_37874_+	transcriptional regulator	NA	NA	NA	NA	NA
AVP32125.1|37994_38735_+	recombinase	NA	I3WFA4	Macacine_betaherpesvirus	57.6	1.6e-24
AVP32126.1|38977_39955_-	protein RepA	NA	J9Q7H0	Salmonella_phage	59.5	3.6e-101
AVP32127.1|40732_41323_-	hypothetical protein	NA	NA	NA	NA	NA
AVP32128.1|41322_41586_-	hypothetical protein	NA	NA	NA	NA	NA
AVP32129.1|42173_42392_+	antitoxin CcdA	NA	NA	NA	NA	NA
AVP32130.1|42393_42699_+	toxin CcdB	NA	NA	NA	NA	NA
AVP32131.1|46963_47161_-	hypothetical protein	NA	NA	NA	NA	NA
AVP32132.1|47116_48283_+	protein SopA	NA	A0A2I6B2X3	Macacine_betaherpesvirus	100.0	7.0e-229
AVP32133.1|48282_49254_+	protein SopB	NA	I3WF22	Macacine_betaherpesvirus	100.0	4.8e-175
AVP32134.1|49767_50040_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32135.1|50981_51287_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32136.1|51515_53216_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	53.2	2.2e-170
AVP32137.1|53795_54449_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	38.4	1.5e-23
AVP32138.1|54449_54671_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32139.1|54684_55119_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AVP32140.1|55163_55934_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32141.1|56123_57236_-|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
AVP32142.1|57464_57890_+	antirestriction protein	NA	NA	NA	NA	NA
AVP32143.1|57936_58359_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AVP32144.1|58355_58547_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32145.1|58464_58767_+	transporter	NA	NA	NA	NA	NA
AVP32194.1|59181_59301_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
AVP32146.1|59519_59753_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32147.1|59848_61021_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	99.2	2.0e-228
AVP32148.1|61017_61818_+	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	98.5	6.2e-144
AVP32149.1|61936_63298_+	hydrolase	NA	NA	NA	NA	NA
AVP32195.1|63676_64348_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
AVP32150.1|64402_64837_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
AVP32151.1|64833_65553_+	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
AVP32152.1|65832_65991_+	protein hok	NA	NA	NA	NA	NA
AVP32153.1|66210_66411_+	hypothetical protein	NA	NA	NA	NA	NA
AVP32154.1|67007_68063_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	30.4	8.7e-21
