The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028106	Fusobacterium gonidiaformans ATCC 25563 chromosome, complete genome	1678881	336401	362544	1678881	plate,protease,tail,terminase,portal,holin,capsid	Fusobacterium_phage(89.66%)	32	NA	NA
AVQ16346.1|336401_337484_+	hypothetical protein	NA	A0A0E3U246	Fusobacterium_phage	45.2	2.3e-85
AVQ16347.1|338551_339220_+	hypothetical protein	NA	A0A0E3Y615	Fusobacterium_phage	50.5	2.2e-49
AVQ16348.1|339346_339790_+	hypothetical protein	NA	A0A0E3Y4U4	Fusobacterium_phage	74.1	2.4e-52
AVQ16349.1|339776_341549_+|terminase	terminase	terminase	A0A0E3U2N4	Fusobacterium_phage	82.3	1.1e-294
AVQ16350.1|341545_341764_+	hypothetical protein	NA	A0A0E3U247	Fusobacterium_phage	77.8	7.0e-26
AVQ16351.1|341773_343315_+|portal	phage portal protein	portal	A0A0E3Y693	Fusobacterium_phage	83.9	1.2e-249
AVQ16352.1|343301_344417_+|protease	Clp protease ClpP	protease	A0A0E3Y6E9	Fusobacterium_phage	57.9	2.4e-109
AVQ16353.1|344434_344755_+	hypothetical protein	NA	A0A0E3Y5E3	Fusobacterium_phage	58.8	7.7e-29
AVQ16354.1|344767_345775_+|capsid	minor capsid protein E	capsid	A0A0E3U2N5	Fusobacterium_phage	69.5	3.6e-133
AVQ16355.1|345816_346035_+	hypothetical protein	NA	A0A0E3U249	Fusobacterium_phage	58.8	9.6e-07
AVQ16356.1|346031_346346_+	hypothetical protein	NA	A0A0E3Y618	Fusobacterium_phage	64.4	4.3e-32
AVQ16357.1|346345_346936_+	hypothetical protein	NA	A0A0E3Y4U7	Fusobacterium_phage	49.0	8.0e-40
AVQ16358.1|346932_347400_+	hypothetical protein	NA	A0A0E3Y698	Fusobacterium_phage	60.1	1.0e-50
AVQ16359.1|347386_347656_+	hypothetical protein	NA	A0A0E3U2N7	Fusobacterium_phage	48.6	7.2e-12
AVQ16360.1|347656_349057_+|tail	phage tail protein	tail	A0A0E3U251	Fusobacterium_phage	76.2	9.9e-214
AVQ16361.1|349066_349600_+|tail	phage tail protein	tail	A0A0E3Y6F4	Fusobacterium_phage	79.7	1.9e-77
AVQ16362.1|349609_349945_+	hypothetical protein	NA	A0A0E3Y5E7	Fusobacterium_phage	64.0	5.7e-35
AVQ16363.1|350119_350383_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ16364.1|350450_353036_+|tail	phage tail tape measure protein	tail	A0A0E3U2N9	Fusobacterium_phage	61.9	9.3e-242
AVQ16365.1|353025_353235_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ16366.1|353237_354314_+	late control protein D	NA	A0A0E3U253	Fusobacterium_phage	68.2	7.6e-137
AVQ16367.1|354313_354829_+|plate	phage baseplate assembly protein V	plate	A0A0E3Y4V1	Fusobacterium_phage	57.1	1.1e-53
AVQ16368.1|354830_355217_+	hypothetical protein	NA	A0A0E3Y6A2	Fusobacterium_phage	69.5	2.9e-46
AVQ16369.1|355216_355528_+	hypothetical protein	NA	A0A0E3Y6F8	Fusobacterium_phage	60.4	1.2e-26
AVQ16370.1|355524_356625_+|plate	baseplate J protein	plate	A0A0E3U2P1	Fusobacterium_phage	67.7	1.6e-142
AVQ16371.1|356617_357181_+|tail	phage tail protein I	tail	A0A0E3U255	Fusobacterium_phage	53.3	3.9e-52
AVQ16372.1|358682_359357_+	hypothetical protein	NA	A0A0E3U258	Fusobacterium_phage	25.9	3.3e-05
AVQ16373.1|359428_359893_+	M15 family peptidase	NA	A9DET4	Yersinia_phage	39.2	1.2e-17
AVQ16374.1|359982_360366_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ16375.1|360352_360805_+	DUF1353 domain-containing protein	NA	A0A0E3Y4V5	Fusobacterium_phage	44.1	6.0e-19
AVQ16376.1|360827_361292_+|holin	holin	holin	Q0H258	Geobacillus_phage	43.6	2.8e-16
AVQ16377.1|361449_362544_+	ATPase	NA	A0A2K9L596	Tupanvirus	27.9	4.2e-10
>prophage 2
CP028106	Fusobacterium gonidiaformans ATCC 25563 chromosome, complete genome	1678881	528184	534766	1678881		Staphylococcus_phage(66.67%)	7	NA	NA
AVQ16539.1|528184_528646_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	55.0	8.7e-42
AVQ16540.1|528650_529730_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.3	1.2e-44
AVQ16541.1|529739_530387_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	37.0	1.1e-18
AVQ16542.1|530399_531611_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	52.6	1.2e-109
AVQ16543.1|531649_533137_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
AVQ16544.1|533236_533953_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.6	1.7e-15
AVQ16545.1|533968_534766_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	21.8	2.8e-11
>prophage 3
CP028106	Fusobacterium gonidiaformans ATCC 25563 chromosome, complete genome	1678881	1187249	1199300	1678881		Prochlorococcus_phage(22.22%)	10	NA	NA
AVQ17122.1|1187249_1187852_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	34.3	1.8e-18
AVQ17123.1|1187897_1189124_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AVQ17124.1|1189140_1190643_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	46.5	2.7e-68
AVQ17125.1|1190644_1191205_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.3	9.0e-25
AVQ17126.1|1191192_1192209_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.7	2.6e-70
AVQ17127.1|1192220_1193570_-	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	30.8	9.1e-47
AVQ17128.1|1193598_1194315_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SE76	Cyanophage	44.1	1.1e-43
AVQ17129.1|1194344_1194821_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	48.1	1.1e-28
AVQ17130.1|1194833_1198511_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.2	9.5e-30
AVQ17131.1|1199018_1199300_+	HU family DNA-binding protein	NA	K4I4Q8	Salmonella_phage	44.6	3.4e-12
>prophage 4
CP028106	Fusobacterium gonidiaformans ATCC 25563 chromosome, complete genome	1678881	1296210	1309559	1678881	integrase	Liberibacter_phage(25.0%)	9	1300613:1300631	1303295:1303313
AVQ17212.1|1296210_1299360_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	25.2	1.9e-63
AVQ17213.1|1299903_1301151_-	hypothetical protein	NA	A0A1V0S9X7	Catovirus	31.9	4.7e-13
1300613:1300631	attL	TGCTCTAAATTATCGTTTA	NA	NA	NA	NA
AVQ17214.1|1301162_1302152_-|integrase	integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	28.5	3.4e-35
AVQ17215.1|1302238_1303264_-	cell filamentation protein Fic	NA	Q9JMN3	Wolbachia_phage	48.9	4.1e-84
AVQ17586.1|1303263_1303956_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
1303295:1303313	attR	TAAACGATAATTTAGAGCA	NA	NA	NA	NA
AVQ17216.1|1303952_1304456_-	restriction endonuclease subunit S	NA	A0A240FAT6	Liberibacter_phage	33.1	1.7e-22
AVQ17217.1|1304445_1305954_-	DNA methyltransferase	NA	A0A2H4PQP4	Staphylococcus_phage	29.1	4.1e-48
AVQ17218.1|1306135_1307830_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.0	8.8e-31
AVQ17219.1|1307816_1309559_-	ABC transporter	NA	G3M9Y6	Bacillus_virus	27.7	2.2e-08
>prophage 5
CP028106	Fusobacterium gonidiaformans ATCC 25563 chromosome, complete genome	1678881	1411815	1418786	1678881	tRNA	Bacillus_virus(33.33%)	9	NA	NA
AVQ17303.1|1411815_1412385_-	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	28.0	3.4e-11
AVQ17304.1|1412388_1412847_-|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AVQ17305.1|1413006_1413627_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AVQ17306.1|1413651_1414578_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	38.4	1.8e-46
AVQ17307.1|1414608_1415916_+	PhoH family protein	NA	A0A141HS37	Bacillus_phage	37.3	1.6e-69
AVQ17308.1|1415959_1416673_-	hypothetical protein	NA	A0A292GAU5	Xanthomonas_phage	44.8	2.3e-33
AVQ17309.1|1416836_1417106_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	X2KQ37	Campylobacter_phage	53.8	9.7e-09
AVQ17310.1|1417090_1417318_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
AVQ17311.1|1417478_1418786_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	65.7	1.1e-153
>prophage 6
CP028106	Fusobacterium gonidiaformans ATCC 25563 chromosome, complete genome	1678881	1530337	1535930	1678881	holin	Enterobacteria_phage(33.33%)	6	NA	NA
AVQ17406.1|1530337_1531444_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	40.1	1.6e-70
AVQ17407.1|1531471_1532899_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A1D7XFA9	Escherichia_phage	41.4	6.5e-35
AVQ17408.1|1532954_1533818_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.2	1.7e-91
AVQ17409.1|1533836_1534541_-	acylneuraminate cytidylyltransferase family protein	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	28.9	6.9e-14
AVQ17410.1|1534560_1534929_-	acyltransferase	NA	A0A1V0SJ47	Klosneuvirus	51.7	1.1e-07
AVQ17411.1|1535135_1535930_-|holin	lipopolysaccharide cholinephosphotransferase	holin	A0A1V0SAS8	Catovirus	28.3	1.2e-11
