assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003031955.1_ASM303195v1	CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	3	2568005-2568166	2	CRISPRCasFinder	no	WYL	csa3,DinG,cas3,WYL,casR,DEDDh,csn2,cas2,cas1,cas9	Unclear	TTTTTTTATGGAAACAACGCTCCACTTCGTTACGCCTTGTATTGGAGTTCTAGGG	55	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh,csn2,cas2,cas1,cas9	NA|140aa|up_7|CP025222.1_2553295_2553715_-,NA|58aa|down_3|CP025222.1_2570351_2570525_-	WYL|299aa|up_9|CP025222.1_2551609_2552506_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|190aa|up_8|CP025222.1_2552550_2553120_-	cd06259, YdcF-like, YdcF-like	NA|140aa|up_7|CP025222.1_2553295_2553715_-	NA	NA|1311aa|up_6|CP025222.1_2554664_2558597_-	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|315aa|up_5|CP025222.1_2558611_2559556_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|1092aa|up_4|CP025222.1_2559615_2562891_-	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|303aa|up_3|CP025222.1_2563272_2564181_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|155aa|up_2|CP025222.1_2564236_2564701_-	pfam01668, SmpB, SmpB protein	NA|794aa|up_1|CP025222.1_2564716_2567098_-	TIGR02063, Ribonuclease_R, ribonuclease R	NA|249aa|up_0|CP025222.1_2567131_2567878_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|78aa|down_0|CP025222.1_2568240_2568474_-	COG1314, SecG, Preprotein translocase subunit SecG [Intracellular trafficking and secretion]	NA|248aa|down_1|CP025222.1_2568573_2569317_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|240aa|down_2|CP025222.1_2569499_2570219_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|58aa|down_3|CP025222.1_2570351_2570525_-	NA	NA|431aa|down_4|CP025222.1_2570627_2571920_-	PRK00077, eno, enolase; Provisional	NA|511aa|down_5|CP025222.1_2572055_2573588_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|252aa|down_6|CP025222.1_2573589_2574345_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|397aa|down_7|CP025222.1_2574390_2575581_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|337aa|down_8|CP025222.1_2575715_2576726_-	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|349aa|down_9|CP025222.1_2576759_2577806_-	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
GCA_003031955.1_ASM303195v1	CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	4	2729435-2730461	3,2,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	csn2,cas2,cas1,cas9	csa3,DinG,cas3,WYL,casR,DEDDh,csn2,cas2,cas1,cas9	Type II-C,Type II-A,Type II-B	GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC,GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC,GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC,GTTTTGGTAGCATTCAAAATAACATAGCTCTAAAAC	36,36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B:II-A,II-B	15,15,14,14	15	TypeII-C,TypeII-A,TypeII-B	csa3,DinG,cas3,WYL,casR,DEDDh,csn2,cas2,cas1,cas9	NA|216aa|up_5|CP025222.1_2717019_2717667_-,NA|121aa|up_0|CP025222.1_2728546_2728909_-,NA|163aa|down_4|CP025222.1_2736976_2737465_-	NA|996aa|up_9|CP025222.1_2710076_2713064_-	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only]	NA|281aa|up_8|CP025222.1_2713561_2714404_+	COG1912, COG1912, Uncharacterized conserved protein [Function unknown]	NA|494aa|up_7|CP025222.1_2714451_2715933_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|296aa|up_6|CP025222.1_2716033_2716921_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|216aa|up_5|CP025222.1_2717019_2717667_-	NA	NA|174aa|up_4|CP025222.1_2717682_2718204_-	cd04268, ZnMc_MMP_like, Zinc-dependent metalloprotease, MMP_like subfamily	NA|343aa|up_3|CP025222.1_2724263_2725292_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|509aa|up_2|CP025222.1_2725560_2727087_+	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]	NA|141aa|up_1|CP025222.1_2728001_2728424_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|121aa|up_0|CP025222.1_2728546_2728909_-	NA	csn2|221aa|down_0|CP025222.1_2730590_2731253_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|CP025222.1_2731242_2731584_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_2|CP025222.1_2731580_2732447_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1335aa|down_3|CP025222.1_2732447_2736452_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|163aa|down_4|CP025222.1_2736976_2737465_-	NA	NA|462aa|down_5|CP025222.1_2737474_2738860_-	pfam04740, LXG, LXG domain of WXG superfamily	NA|131aa|down_6|CP025222.1_2739151_2739544_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|146aa|down_7|CP025222.1_2739565_2740003_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|249aa|down_8|CP025222.1_2740197_2740944_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|266aa|down_9|CP025222.1_2740949_2741747_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]
