The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	1513672	1521323	4607442		Thermobifida_phage(16.67%)	10	NA	NA
AVY97468.1|1513672_1514527_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.4	1.4e-05
AVY97469.1|1514572_1515064_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
AVY97470.1|1515146_1515434_-	ribosome hibernation promoting factor	NA	A0A0M7QCF2	Escherichia_phage	42.0	6.1e-09
AVY97471.1|1515456_1516890_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
AVY97472.1|1516937_1517663_-	lipopolysaccharide ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	5.4e-22
AVY97473.1|1517669_1518224_-	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
AVY97474.1|1518192_1518768_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AVY97475.1|1518764_1519331_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	74.8	2.5e-54
AVY97476.1|1519345_1520332_-	arabinose-5-phosphate isomerase KdsD	NA	A0A2P0VNK5	Tetraselmis_virus	30.7	5.6e-38
AVY97477.1|1520345_1521323_-	calcium/sodium antiporter	NA	A0A2D1GNI8	Pseudoalteromonas_phage	23.3	1.5e-06
>prophage 2
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	1633765	1659950	4607442	tRNA,tail,integrase,plate	Erwinia_phage(39.29%)	32	1627966:1627982	1643086:1643102
1627966:1627982	attL	TGAAGCGGCGCGTGCGG	NA	NA	NA	NA
AVY97585.1|1633765_1634800_-|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	95.3	4.5e-195
AVY97586.1|1634799_1635375_-	phage repressor protein CI	NA	A0A218M4J1	Erwinia_phage	59.4	8.6e-63
AVY97587.1|1635508_1635772_+	hypothetical protein	NA	A0A218M4I5	Erwinia_phage	97.7	3.4e-43
AVY97588.1|1635888_1636227_+	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	70.5	1.9e-38
AVY97589.1|1636293_1636521_+	DUF2732 domain-containing protein	NA	NA	NA	NA	NA
AVY97590.1|1636520_1636742_+	hypothetical protein	NA	A0A0M4S5Q7	Salmonella_phage	76.1	6.0e-25
AVZ00236.1|1636743_1638795_+	replication protein	NA	A0A218M4H2	Erwinia_phage	90.5	0.0e+00
AVY97591.1|1638971_1639415_+	DinI family protein	NA	A0A218M4I0	Erwinia_phage	78.3	3.1e-52
AVY97592.1|1639748_1639952_+|tail	phage tail protein	tail	A0A218M4L8	Erwinia_phage	71.6	2.0e-22
AVY97593.1|1640146_1640656_+	glycoside hydrolase	NA	A0A218M4K3	Erwinia_phage	72.6	4.6e-68
AVY97594.1|1640652_1641078_+	protein lysB	NA	O80310	Escherichia_phage	54.8	3.2e-30
AVY97595.1|1641173_1641641_+|tail	phage tail protein	tail	S4TTA5	Salmonella_phage	58.1	4.1e-47
AVY97596.1|1641874_1642516_+|plate	phage baseplate assembly protein V	plate	O80314	Escherichia_phage	78.4	4.9e-91
AVY97597.1|1642512_1642863_+|plate	baseplate assembly protein	plate	A0A0M4RE59	Salmonella_phage	69.0	2.0e-38
AVY97598.1|1642909_1643776_+|plate	baseplate assembly protein	plate	A0A0F7LCQ9	Escherichia_phage	82.3	1.6e-129
1643086:1643102	attR	TGAAGCGGCGCGTGCGG	NA	NA	NA	NA
AVY97599.1|1643768_1644299_+|tail	phage tail protein I	tail	Q37841	Escherichia_phage	85.8	5.8e-90
AVZ00237.1|1645108_1646389_+	hypothetical protein	NA	F1BUK3	Cronobacter_phage	67.3	4.5e-27
AVY97600.1|1646390_1646810_+|tail	phage tail protein	tail	Q9MCR5	Enterobacteria_phage	60.6	9.5e-11
AVY97601.1|1646928_1648122_+|tail	phage tail protein	tail	S4TRX2	Salmonella_phage	82.3	2.6e-186
AVY97602.1|1648134_1648653_+|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	80.8	2.5e-77
AVY97603.1|1648710_1649004_+	hypothetical protein	NA	A0A0F7LDQ8	Escherichia_phage	72.4	1.7e-27
AVY97604.1|1649036_1649159_+|tail	GpE family phage tail protein	tail	O80316	Escherichia_phage	84.6	8.5e-13
AVY97605.1|1649148_1651596_+|tail	phage tail tape measure protein	tail	Q858U7	Yersinia_virus	47.9	4.5e-177
AVY97606.1|1651609_1652074_+|tail	phage tail protein	tail	A0A218M4I2	Erwinia_phage	67.5	3.7e-56
AVY97607.1|1652070_1653240_+	hypothetical protein	NA	Q6K1G4	Salmonella_virus	69.1	1.7e-150
AVY97608.1|1653306_1653507_+	late control protein B	NA	A0A2I8TV89	Erwinia_phage	71.2	7.4e-22
AVY97609.1|1653872_1654379_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
AVY97610.1|1654456_1656304_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
AVY97611.1|1656329_1656440_-	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AVY97612.1|1656510_1658256_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.7	1.6e-75
AVY97613.1|1658493_1658709_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AVY97614.1|1658936_1659950_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	59.2	4.8e-109
>prophage 3
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	1781980	1837202	4607442	protease,tRNA,plate	Cronobacter_phage(33.33%)	51	NA	NA
AVY97705.1|1781980_1782403_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AVY97706.1|1782407_1784228_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AVZ00244.1|1784194_1785238_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AVY97707.1|1785254_1786553_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AVY97708.1|1786549_1787074_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AVY97709.1|1787076_1788420_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AVZ00245.1|1788481_1789231_+	hypothetical protein	NA	NA	NA	NA	NA
AVY97710.1|1789239_1791888_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.3	6.9e-83
AVY97711.1|1791884_1792583_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
AVY97712.1|1792582_1793980_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AVY97713.1|1794055_1797520_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AVY97714.1|1797530_1798859_+	hypothetical protein	NA	NA	NA	NA	NA
AVY97715.1|1798880_1799360_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AVY97716.1|1799550_1800324_-	hypothetical protein	NA	NA	NA	NA	NA
AVY97717.1|1800893_1801607_-	hypothetical protein	NA	NA	NA	NA	NA
AVY97718.1|1801797_1803933_+	ornithine decarboxylase	NA	NA	NA	NA	NA
AVY97719.1|1804005_1804698_-	response regulator	NA	NA	NA	NA	NA
AVY97720.1|1804687_1806325_-	sensor histidine kinase	NA	NA	NA	NA	NA
AVY97721.1|1806670_1808032_+	malate permease	NA	NA	NA	NA	NA
AVY97722.1|1808049_1808913_+	5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase	NA	NA	NA	NA	NA
AVY97723.1|1808926_1809961_+	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA	NA
AVY97724.1|1809977_1810271_+	citrate lyase acyl carrier protein	NA	NA	NA	NA	NA
AVY97725.1|1810267_1811143_+	citrate (pro-3S)-lyase subunit beta	NA	NA	NA	NA	NA
AVY97726.1|1812675_1813215_+	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA	NA
AVY97727.1|1813192_1813996_+	triphosphoribosyl-dephospho-CoA synthase CitG	NA	NA	NA	NA	NA
AVY97728.1|1814032_1814707_-	cephalosporin hydroxylase	NA	A0A1E1EVB8	Acanthamoeba_castellanii_mimivirus	36.9	4.6e-15
AVY97729.1|1814867_1816124_-	MFS transporter	NA	NA	NA	NA	NA
AVY97730.1|1816354_1817431_-	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA	NA
AVY97731.1|1817486_1817759_-	oxidative damage protection protein	NA	NA	NA	NA	NA
AVY97732.1|1817785_1818844_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AVY97733.1|1818982_1819702_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AVY97734.1|1819698_1820025_+	DUF469 domain-containing protein	NA	NA	NA	NA	NA
AVY97735.1|1820074_1820794_+	DUF2884 domain-containing protein	NA	NA	NA	NA	NA
AVY97736.1|1820852_1821995_-	YggW family oxidoreductase	NA	NA	NA	NA	NA
AVY97737.1|1821987_1822581_-	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
AVY97738.1|1822584_1822881_-	YggU family protein	NA	NA	NA	NA	NA
AVY97739.1|1822877_1823444_-	YggT family protein	NA	NA	NA	NA	NA
AVY97740.1|1823462_1824167_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AVY97741.1|1824185_1825166_+	type IV pili twitching motility protein PilT	NA	NA	NA	NA	NA
AVY97742.1|1825171_1825588_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
AVY97743.1|1825587_1826148_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
AVY97744.1|1826265_1827213_-	glutathione synthase	NA	NA	NA	NA	NA
AVY97745.1|1827233_1827965_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AVY97746.1|1828048_1828756_-	deoxyribonuclease I	NA	NA	NA	NA	NA
AVY97747.1|1828850_1829348_-|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
AVY97748.1|1829463_1830861_-	sugar porter family MFS transporter	NA	NA	NA	NA	NA
AVY97749.1|1831298_1832450_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	63.2	8.1e-129
AVZ00246.1|1833098_1833245_+	virulence promoting factor	NA	NA	NA	NA	NA
AVY97750.1|1833253_1835230_+	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
AVY97751.1|1835415_1836336_+	agmatinase	NA	NA	NA	NA	NA
AVY97752.1|1836443_1837202_-|protease	metalloprotease	protease	NA	NA	NA	NA
>prophage 4
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	2120104	2176830	4607442	portal,terminase,tail,capsid,head,tRNA,holin,integrase	Cronobacter_phage(78.95%)	68	2161565:2161579	2179637:2179651
AVY97990.1|2120104_2122684_+	hypothetical protein	NA	A0A076FHE1	Aureococcus_anophage	23.6	2.0e-10
AVY97991.1|2124266_2125418_-	hypothetical protein	NA	NA	NA	NA	NA
AVY97992.1|2125436_2126495_-|integrase	integrase	integrase	F1BUN9	Cronobacter_phage	84.6	3.5e-171
AVY97993.1|2126494_2127112_-	Repressor protein CI	NA	F1BUN8	Cronobacter_phage	74.6	9.5e-84
AVY97994.1|2127221_2127410_+	hypothetical protein	NA	F1BUN7	Cronobacter_phage	57.1	2.8e-15
AVY97995.1|2127466_2127970_+	hypothetical protein	NA	F1BUN6	Cronobacter_phage	69.5	8.0e-57
AVY97996.1|2127979_2128174_+	hypothetical protein	NA	NA	NA	NA	NA
AVY97997.1|2128163_2128592_+	hypothetical protein	NA	F1BUN5	Cronobacter_phage	48.4	4.9e-23
AVY97998.1|2128591_2128993_+	hypothetical protein	NA	F1BUN2	Cronobacter_phage	55.6	3.2e-40
AVY97999.1|2129060_2129294_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98000.1|2129284_2130142_+	adenine methylase	NA	F1BUN1	Cronobacter_phage	89.0	4.3e-143
AVY98001.1|2130138_2132160_+	replication endonuclease	NA	F1BUM9	Cronobacter_phage	74.0	5.3e-301
AVY98002.1|2132278_2132491_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98003.1|2132464_2132788_-	transcriptional regulator	NA	F1BUM8	Cronobacter_phage	88.5	1.6e-45
AVY98004.1|2132784_2133837_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	77.4	2.0e-158
AVY98005.1|2133833_2135609_-|terminase	terminase	terminase	F1BUM5	Cronobacter_phage	82.1	2.7e-288
AVY98006.1|2135781_2136579_+|capsid	phage capsid protein	capsid	F1BUM4	Cronobacter_phage	54.6	6.7e-66
AVY98007.1|2136637_2137660_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	80.6	1.8e-156
AVY98008.1|2137663_2138392_+|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	66.8	6.5e-84
AVY98009.1|2138369_2138567_+	hypothetical protein	NA	Q8W634	Enterobacteria_phage	59.3	8.3e-10
AVY98010.1|2138665_2139118_+|head	head completion protein	head	F1BUL8	Cronobacter_phage	75.3	8.5e-58
AVY98011.1|2139114_2139621_+|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	68.3	8.1e-65
AVY98012.1|2139617_2140325_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	78.2	5.2e-102
AVY98013.1|2140321_2141449_+	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	81.1	6.4e-171
AVY98014.1|2141445_2141901_+	DUF2597 domain-containing protein	NA	F1BUL4	Cronobacter_phage	74.2	7.0e-60
AVY98015.1|2141910_2142207_+|holin	holin	holin	C7BGD7	Burkholderia_phage	46.8	1.2e-15
AVY98016.1|2142203_2142545_+	hypothetical protein	NA	F1BUL3	Cronobacter_phage	86.1	1.0e-47
AVY98017.1|2142544_2142913_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	50.5	2.0e-20
AVZ00257.1|2142854_2143049_+	hypothetical protein	NA	F1BUL1	Cronobacter_phage	55.9	5.7e-11
AVY98018.1|2143032_2143293_+	hypothetical protein	NA	A5X9I7	Aeromonas_virus	61.6	8.1e-21
AVY98019.1|2143480_2145571_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	69.1	1.5e-269
AVY98020.1|2145567_2145897_+	DUF2590 domain-containing protein	NA	F1BUK8	Cronobacter_phage	72.5	9.3e-38
AVY98021.1|2145893_2147078_+	hypothetical protein	NA	F1BUK6	Cronobacter_phage	79.3	1.8e-176
AVY98022.1|2147070_2147658_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	81.0	5.8e-91
AVY98023.1|2147668_2149648_+	hypothetical protein	NA	F1BUK3	Cronobacter_phage	79.2	1.9e-149
AVY98024.1|2149649_2150072_+|tail	phage tail protein	tail	M1FJ98	Enterobacteria_phage	50.4	4.4e-24
AVY98025.1|2150061_2150787_+	hypothetical protein	NA	F1BUK1	Cronobacter_phage	50.2	7.0e-62
AVY98026.1|2150758_2151307_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	71.4	8.7e-65
AVY98027.1|2151309_2152986_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	63.0	1.2e-202
AVY98028.1|2153038_2153323_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98029.1|2153663_2154512_-	hypothetical protein	NA	NA	NA	NA	NA
AVY98030.1|2155073_2155556_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.5	2.6e-28
AVY98031.1|2155679_2156156_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
AVY98032.1|2156145_2156433_+	RnfH family protein	NA	NA	NA	NA	NA
AVY98033.1|2156496_2156838_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AVY98034.1|2156819_2157002_-	hypothetical protein	NA	NA	NA	NA	NA
AVY98035.1|2156976_2158638_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AVY98036.1|2158723_2159602_-	NAD(+) kinase	NA	NA	NA	NA	NA
AVY98037.1|2159699_2160317_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AVY98038.1|2160366_2161656_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
2161565:2161579	attL	ATCATGCCGGTTTCT	NA	NA	NA	NA
AVZ00258.1|2161674_2162466_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AVY98039.1|2162632_2163994_+	signal recognition particle protein	NA	NA	NA	NA	NA
AVY98040.1|2164263_2164512_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AVY98041.1|2164527_2165067_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AVY98042.1|2165098_2165866_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AVY98043.1|2165910_2166258_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AVY98044.1|2166387_2166792_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AVY98045.1|2166849_2168214_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
AVY98046.1|2168217_2168703_-	hypothetical protein	NA	NA	NA	NA	NA
AVY98047.1|2168718_2169939_-	diguanylate cyclase	NA	NA	NA	NA	NA
AVY98048.1|2169931_2170525_-	DUF4154 domain-containing protein	NA	NA	NA	NA	NA
AVY98049.1|2170612_2170987_-	DUF2799 domain-containing protein	NA	NA	NA	NA	NA
AVY98050.1|2171207_2172278_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.2	5.8e-89
AVY98051.1|2172288_2173410_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
AVY98052.1|2173470_2174343_+	gluconolactonase	NA	NA	NA	NA	NA
AVY98053.1|2174339_2175500_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
AVZ00259.1|2175606_2175654_-	hypothetical protein	NA	NA	NA	NA	NA
AVY98054.1|2175837_2176830_-|integrase	integrase	integrase	A0A0F7LBR0	Escherichia_phage	54.2	1.2e-99
2179637:2179651	attR	AGAAACCGGCATGAT	NA	NA	NA	NA
>prophage 5
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	2183292	2245879	4607442	terminase,tail,capsid,head,tRNA	Cronobacter_phage(46.67%)	61	NA	NA
AVY98063.1|2183292_2183613_-	transcriptional regulator	NA	F1BUM8	Cronobacter_phage	60.4	1.4e-25
AVY98064.1|2184651_2186457_-	hypothetical protein	NA	F1BUM5	Cronobacter_phage	52.7	2.9e-181
AVY98065.1|2186612_2187668_+|capsid	phage capsid protein	capsid	R9TRS3	Vibrio_phage	41.3	3.0e-29
AVY98066.1|2187692_2188739_+|capsid	phage major capsid protein, P2 family	capsid	A0A1L5C2B0	Pseudoalteromonas_phage	45.0	3.8e-77
AVY98067.1|2188742_2189450_+|terminase	terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	39.1	4.6e-26
AVY98068.1|2189552_2190026_+|head	head completion protein	head	F1BUL8	Cronobacter_phage	54.0	1.0e-37
AVY98069.1|2190022_2190517_+|tail	phage tail protein	tail	NA	NA	NA	NA
AVY98070.1|2190503_2191199_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	52.2	8.2e-52
AVY98071.1|2191195_2192389_+	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	50.5	9.7e-101
AVY98072.1|2192392_2192848_+	DUF2597 domain-containing protein	NA	A5X9I1	Aeromonas_virus	55.6	3.9e-42
AVY98073.1|2192851_2193163_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98074.1|2193149_2193488_+	hypothetical protein	NA	F1BUL3	Cronobacter_phage	69.3	1.2e-35
AVY98075.1|2193791_2194016_+	hypothetical protein	NA	F1BUL1	Cronobacter_phage	47.6	1.0e-08
AVY98076.1|2193988_2194258_+	hypothetical protein	NA	A5X9I7	Aeromonas_virus	47.6	1.3e-13
AVY98077.1|2194275_2194476_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98078.1|2194472_2196407_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	36.1	6.2e-105
AVY98079.1|2196403_2196733_+	DUF2590 domain-containing protein	NA	F1BUK8	Cronobacter_phage	56.4	2.9e-23
AVY98080.1|2196729_2197911_+	hypothetical protein	NA	F1BUK6	Cronobacter_phage	62.0	4.7e-140
AVY98081.1|2197900_2199571_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	53.1	1.7e-42
AVY98082.1|2199574_2201017_+	hypothetical protein	NA	F1BUK3	Cronobacter_phage	43.7	3.8e-67
AVY98083.1|2201026_2201716_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98084.1|2201708_2202257_+	hypothetical protein	NA	A5X9J7	Aeromonas_virus	45.0	8.5e-28
AVY98085.1|2202253_2203918_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	40.3	5.6e-115
AVY98086.1|2204381_2204747_+	hypothetical protein	NA	NA	NA	NA	NA
AVY98087.1|2205065_2205305_+	DNA polymerase V	NA	I6PD82	Cronobacter_phage	58.2	1.4e-22
AVY98088.1|2205333_2205819_-	hypothetical protein	NA	NA	NA	NA	NA
AVY98089.1|2206113_2206455_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
AVY98090.1|2206722_2207460_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AVY98091.1|2207590_2208571_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
AVY98092.1|2208567_2209299_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
AVY98093.1|2209428_2212002_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	34.9	1.4e-125
AVY98094.1|2217756_2219052_+	alpha-ketoglutarate transporter	NA	Q6JIH2	Burkholderia_virus	28.9	5.3e-44
AVY98095.1|2219048_2219372_-	hypothetical protein	NA	NA	NA	NA	NA
AVY98096.1|2219416_2220772_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AVY98097.1|2220882_2223546_-	protein lysine acetyltransferase	NA	NA	NA	NA	NA
AVY98098.1|2223581_2224280_-	DTW domain-containing protein	NA	NA	NA	NA	NA
AVY98099.1|2224355_2224775_-	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	36.5	7.0e-14
AVY98100.1|2224981_2226079_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
AVY98101.1|2226145_2226835_-	uracil-DNA glycosylase	NA	A0A077BCN4	Equid_alphaherpesvirus	51.6	1.8e-54
AVY98102.1|2227149_2227533_+	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	73.0	1.8e-32
AVY98103.1|2227586_2228918_-	ATP-dependent RNA helicase SrmB	NA	A0A1V0SIR5	Klosneuvirus	31.7	9.6e-49
AVY98104.1|2229049_2229787_+|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	tRNA	NA	NA	NA	NA
AVY98105.1|2229771_2231391_-	L-aspartate oxidase	NA	NA	NA	NA	NA
AVZ00261.1|2231362_2231497_-	L-aspartate oxidase	NA	NA	NA	NA	NA
AVY98106.1|2231816_2232392_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
AVY98107.1|2232423_2233077_+	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
AVY98108.1|2233076_2234030_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
AVY98109.1|2234026_2234503_+	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
AVY98110.1|2234688_2236488_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	26.1	1.0e-24
AVY98111.1|2236504_2237467_+	signal peptidase I	NA	NA	NA	NA	NA
AVY98112.1|2237688_2238369_+	ribonuclease III	NA	A0A2P0VNZ5	Tetraselmis_virus	38.3	3.7e-20
AVY98113.1|2238365_2239271_+	GTPase Era	NA	NA	NA	NA	NA
AVY98114.1|2239282_2239990_+	DNA repair protein RecO	NA	NA	NA	NA	NA
AVY98115.1|2240017_2240749_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AVY98116.1|2240748_2241129_+	holo-ACP synthase	NA	NA	NA	NA	NA
AVY98117.1|2241125_2241386_-	4Fe-4S dicluster domain-containing protein	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	50.0	4.2e-17
AVY98118.1|2241442_2242291_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AVY98119.1|2242407_2243301_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
AVY98120.1|2243314_2244676_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AVY98121.1|2244679_2245315_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
AVY98122.1|2245339_2245879_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.6	7.6e-05
>prophage 6
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	2680884	2687204	4607442		Enterobacteria_phage(50.0%)	6	NA	NA
AVY98470.1|2680884_2682276_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	30.7	2.8e-19
AVY98471.1|2682453_2683350_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.6	6.2e-44
AVY98472.1|2683739_2684825_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.4	3.3e-100
AVY98473.1|2684824_2685724_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	2.2e-28
AVY98474.1|2685773_2686652_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	65.2	3.5e-108
AVY98475.1|2686655_2687204_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	54.2	1.0e-49
>prophage 7
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	3580389	3613639	4607442	tail,holin,terminase	Enterobacteria_phage(29.41%)	39	NA	NA
AVY99275.1|3580389_3581658_-	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	92.7	1.2e-231
AVY99276.1|3581661_3582081_-	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	57.5	1.7e-36
AVY99277.1|3582790_3583384_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99278.1|3583584_3584775_-	hypothetical protein	NA	C6ZR20	Salmonella_phage	53.8	1.2e-103
AVY99279.1|3584927_3586196_-|tail	phage tail protein	tail	K7P6T0	Enterobacteria_phage	60.5	4.7e-138
AVY99280.1|3586254_3586488_-	cor protein	NA	E4WL42	Enterobacteria_phage	88.3	8.9e-35
AVY99281.1|3586598_3587273_-	hypothetical protein	NA	K7PGX6	Enterobacteria_phage	87.9	6.0e-108
AVY99282.1|3587272_3587575_-	hypothetical protein	NA	E4WL40	Enterobacteria_phage	88.0	3.8e-46
AVY99283.1|3587576_3591032_-	host specificity protein	NA	K7P840	Enterobacteria_phage	86.6	0.0e+00
AVY99284.1|3591090_3591531_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99285.1|3591719_3592334_-|tail	phage tail protein	tail	K7PH91	Enterobacterial_phage	63.0	4.4e-57
AVZ00324.1|3592386_3592794_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99286.1|3592880_3593606_-	peptidase P60	NA	K7P7M8	Enterobacteria_phage	89.7	2.3e-129
AVY99287.1|3593608_3594364_-|tail	phage minor tail protein L	tail	K7PJS0	Enterobacterial_phage	77.6	5.2e-116
AVY99288.1|3594360_3594708_-|tail	phage tail protein	tail	I6PBN7	Cronobacter_phage	59.1	3.2e-36
AVY99289.1|3594744_3597798_-|tail	phage tail tape measure protein	tail	K7PMB9	Enterobacterial_phage	39.7	2.2e-149
AVY99290.1|3597794_3598109_-	hypothetical protein	NA	I6PD79	Cronobacter_phage	64.7	5.8e-21
AVY99291.1|3598105_3598417_-	hypothetical protein	NA	I6PDG2	Cronobacter_phage	67.0	9.1e-35
AVY99292.1|3598480_3599152_-|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	46.8	9.7e-50
AVY99293.1|3599222_3599633_-	hypothetical protein	NA	I6PDJ8	Cronobacter_phage	54.3	2.5e-32
AVY99294.1|3599629_3600214_-	hypothetical protein	NA	G8C7Q1	Escherichia_phage	55.3	4.5e-51
AVY99295.1|3600215_3600566_-	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	1.1e-33
AVY99296.1|3600565_3601048_-	hypothetical protein	NA	A0A1W6JS23	Salmonella_phage	33.8	1.9e-10
AVY99297.1|3601365_3602316_-	hypothetical protein	NA	A0A1B0VMF8	Pseudomonas_phage	75.2	6.9e-134
AVY99298.1|3602328_3603102_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	59.6	1.4e-68
AVY99299.1|3603182_3604280_-	hypothetical protein	NA	I6PD76	Cronobacter_phage	59.8	8.6e-120
AVY99300.1|3604281_3605670_-	hypothetical protein	NA	A0A1B0VMH0	Pseudomonas_phage	51.5	5.9e-126
AVZ00325.1|3605671_3606979_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	56.8	1.9e-142
AVY99301.1|3606956_3607946_-|terminase	terminase small subunit	terminase	A0A0U2RXW9	Escherichia_phage	35.6	2.5e-30
AVY99302.1|3609000_3609408_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99303.1|3609604_3610120_-	hypothetical protein	NA	K7PHH7	Enterobacteria_phage	75.4	9.7e-66
AVY99304.1|3610116_3610653_-	lysozyme	NA	H6WRZ4	Salmonella_phage	84.2	1.6e-87
AVY99305.1|3610652_3610868_-|holin	holin	holin	A5LH82	Enterobacteria_phage	81.7	2.5e-28
AVY99306.1|3610985_3611357_+	hypothetical protein	NA	NA	NA	NA	NA
AVY99307.1|3611516_3612332_-	antitermination protein	NA	K7P7B9	Enterobacteria_phage	80.4	3.3e-124
AVY99308.1|3612328_3612469_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	60.5	5.2e-06
AVY99309.1|3612465_3612828_-	hypothetical protein	NA	K7PM48	Enterobacteria_phage	79.0	1.2e-49
AVY99310.1|3612830_3613037_-	hypothetical protein	NA	H6WRY8	Salmonella_phage	75.8	7.9e-27
AVY99311.1|3613036_3613639_-	hypothetical protein	NA	S4TTI0	Salmonella_phage	81.5	1.3e-93
>prophage 8
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	3618886	3636136	4607442	tRNA,integrase	Enterobacteria_phage(46.15%)	17	3613389:3613401	3631324:3631336
3613389:3613401	attL	AATTTGGCATAAC	NA	NA	NA	NA
AVY99318.1|3618886_3619573_-	phage replication protein	NA	G8C7U6	Escherichia_phage	64.5	1.4e-83
AVY99319.1|3619569_3620427_-	hypothetical protein	NA	K7PGZ0	Enterobacteria_phage	70.1	1.7e-99
AVY99320.1|3620561_3621110_-	regulator	NA	M9NZI6	Enterobacteria_phage	63.7	1.7e-55
AVY99321.1|3621129_3621357_-	transcriptional regulator	NA	Q76H55	Enterobacteria_phage	69.0	1.3e-22
AVZ00326.1|3621466_3622165_+	hypothetical protein	NA	Q76H56	Enterobacteria_phage	77.2	1.1e-101
AVY99322.1|3622257_3623865_+	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	46.7	7.2e-91
AVY99323.1|3624619_3624817_+	hypothetical protein	NA	NA	NA	NA	NA
AVY99324.1|3624803_3625013_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99325.1|3625511_3628391_+	exodeoxyribonuclease VIII	NA	K7PJT5	Enterobacteria_phage	71.9	0.0e+00
AVZ00327.1|3628402_3629515_+	enterohemolysin	NA	H6WRX0	Salmonella_phage	77.8	2.2e-163
AVY99326.1|3629554_3629797_+	DUF4060 domain-containing protein	NA	K7PHF4	Enterobacteria_phage	94.9	2.1e-34
AVY99327.1|3629861_3630077_+	hypothetical protein	NA	A0A0U2RY08	Escherichia_phage	59.2	4.8e-19
AVY99328.1|3630076_3631297_+|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	52.8	9.5e-120
AVY99329.1|3631363_3632344_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
3631324:3631336	attR	GTTATGCCAAATT	NA	NA	NA	NA
AVY99330.1|3632445_3632745_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
AVY99331.1|3632749_3635137_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AVY99332.1|3635152_3636136_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	43.2	1.7e-34
>prophage 9
CP028520	Lelliottia sp. WB101 chromosome, complete genome	4607442	3690836	3716211	4607442	portal,terminase,tail,capsid,head	Cronobacter_phage(70.83%)	27	NA	NA
AVY99388.1|3690836_3692462_-	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	47.0	7.0e-94
AVY99389.1|3692458_3693013_-	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	45.9	3.7e-31
AVY99390.1|3693002_3693695_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99391.1|3693704_3695147_-	hypothetical protein	NA	F1BUK3	Cronobacter_phage	43.7	2.9e-67
AVY99392.1|3695150_3696821_-	hypothetical protein	NA	F1BUK5	Cronobacter_phage	52.5	4.9e-42
AVY99393.1|3696810_3697992_-	hypothetical protein	NA	F1BUK6	Cronobacter_phage	60.9	4.4e-138
AVY99394.1|3697984_3698314_-	DUF2590 domain-containing protein	NA	F1BUK8	Cronobacter_phage	55.3	3.4e-24
AVY99395.1|3698310_3700329_-|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	30.8	1.1e-93
AVY99396.1|3700534_3700807_-	hypothetical protein	NA	A5X9I7	Aeromonas_virus	52.4	1.6e-14
AVY99397.1|3700790_3701306_-	hypothetical protein	NA	F1BUL1	Cronobacter_phage	45.1	1.5e-10
AVY99398.1|3701305_3701644_-	hypothetical protein	NA	F1BUL3	Cronobacter_phage	69.3	2.0e-35
AVY99399.1|3701630_3701942_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99400.1|3701945_3702401_-	DUF2597 domain-containing protein	NA	A0A0U3TH58	Pseudomonas_phage	58.7	9.5e-41
AVY99401.1|3702401_3703622_-	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	45.8	1.3e-92
AVY99402.1|3704305_3704812_-	hypothetical protein	NA	F1BUL7	Cronobacter_phage	38.9	2.7e-28
AVY99403.1|3704808_3705261_-|head	head completion protein	head	F1BUL8	Cronobacter_phage	54.0	4.3e-33
AVY99404.1|3705393_3706116_-|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	53.6	1.5e-59
AVY99405.1|3706119_3707289_-|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	45.3	7.8e-79
AVY99406.1|3707366_3708257_-|capsid	phage capsid protein	capsid	F1BUM4	Cronobacter_phage	39.4	6.6e-38
AVY99407.1|3710269_3711370_+|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	63.5	9.2e-122
AVY99408.1|3711366_3711693_+	hypothetical protein	NA	F1BUM8	Cronobacter_phage	37.3	1.5e-11
AVY99409.1|3711723_3712464_-	restriction endonuclease subunit M	NA	A2I2Y7	Vibrio_virus	62.7	6.4e-87
AVY99410.1|3712538_3712859_-	hypothetical protein	NA	K7PK20	Enterobacteria_phage	43.6	5.9e-05
AVZ00331.1|3712861_3715543_-	bifunctional DNA primase/helicase	NA	A0A077K8T2	Ralstonia_phage	45.2	6.3e-233
AVY99411.1|3715563_3715797_-	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	41.8	4.6e-07
AVZ00332.1|3715810_3716023_-	hypothetical protein	NA	NA	NA	NA	NA
AVY99412.1|3716022_3716211_-	hypothetical protein	NA	A0A0N7C1W2	Escherichia_phage	45.9	3.6e-10
>prophage 1
CP028521	Lelliottia sp. WB101 plasmid unnamed1	126628	37054	45797	126628		Emiliania_huxleyi_virus(16.67%)	9	NA	NA
AVZ00398.1|37054_39043_-	hypothetical protein	NA	G8DH78	Emiliania_huxleyi_virus	27.2	5.3e-27
AVZ00470.1|39111_39342_-	hypothetical protein	NA	NA	NA	NA	NA
AVZ00471.1|39998_40253_-	DNA polymerase III subunit theta	NA	A0A077SLL5	Escherichia_phage	67.9	1.6e-21
AVZ00399.1|40433_40625_-	hypothetical protein	NA	NA	NA	NA	NA
AVZ00400.1|40666_41356_-	antirestriction protein	NA	A0A1I9S7Y0	Rhodococcus_phage	31.7	5.4e-11
AVZ00401.1|41567_42347_-	hypothetical protein	NA	A0A219UQS0	Bacillus_phage	32.3	3.4e-06
AVZ00402.1|43604_43832_-	type II toxin-antitoxin system antitoxin, RelB/DinJ family	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	51.9	6.9e-16
AVZ00403.1|44010_44913_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVZ00404.1|45050_45797_+	short-chain dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.2	2.9e-18
