assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003070885.1_ASM307088v1	CP028913	Agromyces sp. 30A chromosome, complete genome	2	419582-419673	2	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	Orphan	GCGACGACGATGCGGATGCTCATGCGG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	NA,NA	NA|518aa|up_9|CP028913.1_407536_409090_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|149aa|up_8|CP028913.1_409339_409786_+	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase	NA|142aa|up_7|CP028913.1_409785_410211_+	cd03453, SAV4209_like, SAV4209_like	NA|400aa|up_6|CP028913.1_410212_411412_+	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase	NA|129aa|up_5|CP028913.1_411437_411824_-	PRK05454, PRK05454, glucans biosynthesis glucosyltransferase MdoH	NA|603aa|up_4|CP028913.1_411820_413629_-	pfam04024, PspC, PspC domain	NA|415aa|up_3|CP028913.1_413546_414791_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|up_2|CP028913.1_414783_415452_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|519aa|up_1|CP028913.1_415417_416974_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|568aa|up_0|CP028913.1_417125_418829_-	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	NA|270aa|down_0|CP028913.1_420877_421687_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|295aa|down_1|CP028913.1_421683_422568_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|205aa|down_2|CP028913.1_422679_423294_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|302aa|down_3|CP028913.1_423372_424278_+	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|406aa|down_4|CP028913.1_424318_425536_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|506aa|down_5|CP028913.1_425616_427134_-	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|92aa|down_6|CP028913.1_427490_427766_+	PRK07597, secE, preprotein translocase subunit SecE; Reviewed	NA|309aa|down_7|CP028913.1_427830_428757_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|143aa|down_8|CP028913.1_428913_429342_+	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|230aa|down_9|CP028913.1_429488_430178_+	PRK05424, rplA, 50S ribosomal protein L1; Validated
GCA_003070885.1_ASM307088v1	CP028913	Agromyces sp. 30A chromosome, complete genome	4	2234290-2234379	4	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	Orphan	AAGACCCCAGCGCCCCGGCGCGCG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	NA|165aa|up_7|CP028913.1_2224545_2225040_+,NA	NA|370aa|up_9|CP028913.1_2221924_2223034_-	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|425aa|up_8|CP028913.1_2223144_2224419_-	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|165aa|up_7|CP028913.1_2224545_2225040_+	NA	NA|120aa|up_6|CP028913.1_2225107_2225467_-	pfam02136, NTF2, Nuclear transport factor 2 (NTF2) domain	NA|199aa|up_5|CP028913.1_2225505_2226102_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|819aa|up_4|CP028913.1_2226105_2228562_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|90aa|up_3|CP028913.1_2228742_2229012_+	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|362aa|up_2|CP028913.1_2229063_2230149_-	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|404aa|up_1|CP028913.1_2230474_2231686_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|723aa|up_0|CP028913.1_2231682_2233851_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|80aa|down_0|CP028913.1_2234802_2235042_-	pfam02956, TT_ORF1, TT viral orf 1	NA|217aa|down_1|CP028913.1_2235114_2235765_-	PRK03624, PRK03624, putative acetyltransferase; Provisional	NA|630aa|down_2|CP028913.1_2235776_2237666_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|420aa|down_3|CP028913.1_2237748_2239008_+	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|279aa|down_4|CP028913.1_2239022_2239859_+	COG3570, StrB, Streptomycin 6-kinase [Defense mechanisms]	NA|395aa|down_5|CP028913.1_2239989_2241174_-	cd03317, NAAAR, N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids	NA|425aa|down_6|CP028913.1_2242012_2243287_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|322aa|down_7|CP028913.1_2243352_2244318_-	TIGR03383, Structure_Of_Uricase, urate oxidase	NA|119aa|down_8|CP028913.1_2244321_2244678_-	TIGR02962, Probable_5-hydroxyisourate_hydrolase_R09H10	NA|627aa|down_9|CP028913.1_2244674_2246555_-	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)
GCA_003070885.1_ASM307088v1	CP028913	Agromyces sp. 30A chromosome, complete genome	5	2386231-2386335	5	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	Orphan	TGGACCGCGCCGCGCAGGACGACTGGTACGGGGCGACGAC	40	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	NA,NA	NA|388aa|up_9|CP028913.1_2374470_2375634_-	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins	NA|313aa|up_8|CP028913.1_2375633_2376572_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|237aa|up_7|CP028913.1_2376575_2377286_-	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	NA|213aa|up_6|CP028913.1_2377295_2377934_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|391aa|up_5|CP028913.1_2377930_2379103_-	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family	NA|625aa|up_4|CP028913.1_2379059_2380934_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|291aa|up_3|CP028913.1_2381096_2381969_-	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|214aa|up_2|CP028913.1_2382049_2382691_-	cd16344, LMWPAP, low molecular weight protein arginine phosphatase	NA|476aa|up_1|CP028913.1_2382687_2384115_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|571aa|up_0|CP028913.1_2384405_2386118_-	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|567aa|down_0|CP028913.1_2387490_2389191_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|384aa|down_1|CP028913.1_2389319_2390471_+	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|501aa|down_2|CP028913.1_2390573_2392076_-	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|473aa|down_3|CP028913.1_2392209_2393628_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|327aa|down_4|CP028913.1_2393643_2394624_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|305aa|down_5|CP028913.1_2394613_2395528_+	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|256aa|down_6|CP028913.1_2395514_2396282_+	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|430aa|down_7|CP028913.1_2396558_2397848_-	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|301aa|down_8|CP028913.1_2398113_2399016_-	COG2962, RarD, Predicted permeases [General function prediction only]	NA|99aa|down_9|CP028913.1_2399244_2399541_-	PRK00364, groES, co-chaperonin GroES; Reviewed
GCA_003070885.1_ASM307088v1	CP028913	Agromyces sp. 30A chromosome, complete genome	6	2888342-2888427	6	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	Orphan	CTAGTTGCCGCCCTCGGTGAGTTC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,cas3,DEDDh,DinG	NA,NA|138aa|down_9|CP028913.1_2900367_2900781_+	NA|1019aa|up_9|CP028913.1_2875318_2878375_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|191aa|up_8|CP028913.1_2878374_2878947_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|475aa|up_7|CP028913.1_2878956_2880381_-	pfam06738, ThrE, Putative threonine/serine exporter	NA|452aa|up_6|CP028913.1_2880380_2881736_-	pfam03605, DcuA_DcuB, Anaerobic c4-dicarboxylate membrane transporter	NA|247aa|up_5|CP028913.1_2881732_2882473_-	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E	NA|306aa|up_4|CP028913.1_2882967_2883885_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|262aa|up_3|CP028913.1_2884011_2884797_+	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|160aa|up_2|CP028913.1_2884837_2885317_+	pfam02464, CinA, Competence-damaged protein	NA|517aa|up_1|CP028913.1_2885353_2886904_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|443aa|up_0|CP028913.1_2886907_2888236_-	PRK06062, PRK06062, hypothetical protein; Provisional	NA|287aa|down_0|CP028913.1_2889618_2890479_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|279aa|down_1|CP028913.1_2890478_2891315_-	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|310aa|down_2|CP028913.1_2891311_2892241_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|339aa|down_3|CP028913.1_2892267_2893284_-	TIGR03842, F420_CPS_4043, F420-dependent oxidoreductase, CPS_4043 family	NA|488aa|down_4|CP028913.1_2893294_2894758_-	PRK08323, PRK08323, phenylhydantoinase; Validated	NA|283aa|down_5|CP028913.1_2894786_2895635_-	cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases)	NA|482aa|down_6|CP028913.1_2895867_2897313_+	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional	NA|685aa|down_7|CP028913.1_2897354_2899409_-	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|253aa|down_8|CP028913.1_2899559_2900318_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|138aa|down_9|CP028913.1_2900367_2900781_+	NA
