The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029206	Actinobacillus porcitonsillarum strain 9953L55 chromosome, complete genome	2263191	268982	274475	2263191		Enterobacteria_phage(50.0%)	7	NA	NA
AWI50233.1|268982_269717_-	teichoic acid ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.1	3.8e-15
AWI51948.1|269725_270511_-	ABC transporter	NA	NA	NA	NA	NA
AWI50234.1|270521_271064_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	52.0	7.6e-53
AWI50235.1|271060_271939_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.4	1.7e-41
AWI50236.1|271938_272817_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.4	4.4e-111
AWI50237.1|272824_273889_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.4	1.0e-101
AWI50238.1|274133_274475_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	49.5	7.2e-25
>prophage 2
CP029206	Actinobacillus porcitonsillarum strain 9953L55 chromosome, complete genome	2263191	1318854	1333200	2263191	tRNA	uncultured_Mediterranean_phage(30.0%)	15	NA	NA
AWI51135.1|1318854_1320165_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	58.8	1.9e-129
AWI51136.1|1320243_1320657_+	DUF2251 domain-containing protein	NA	NA	NA	NA	NA
AWI51137.1|1320670_1322485_-	ATP-dependent DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	37.2	3.9e-85
AWI51138.1|1322516_1322822_-	iron donor protein CyaY	NA	NA	NA	NA	NA
AWI51139.1|1322838_1323609_-	lipooligosaccharide biosynthesis protein LpsA	NA	A0A1S5NQ44	Burkholderia_phage	29.6	3.0e-10
AWI51140.1|1323622_1324183_-	GTP pyrophosphokinase	NA	Q0H269	Geobacillus_phage	31.2	4.8e-18
AWI51141.1|1324187_1325219_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.0	8.9e-111
AWI51142.1|1325317_1326100_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AWI51143.1|1326255_1327233_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	A0A2H4UV25	Bodo_saltans_virus	28.5	4.8e-05
AWI51144.1|1327381_1327687_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.9	3.8e-09
AWI51145.1|1327756_1329604_+	protein translocase subunit SecD	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	23.4	3.1e-05
AWI51146.1|1329614_1330589_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	39.3	1.3e-47
AWI51147.1|1330736_1331240_+	non-heme ferritin	NA	NA	NA	NA	NA
AWI51148.1|1331239_1331737_+	non-heme ferritin	NA	NA	NA	NA	NA
AWI51149.1|1331898_1333200_+	permease	NA	A0A0R6PHV4	Moraxella_phage	82.2	3.5e-181
>prophage 3
CP029206	Actinobacillus porcitonsillarum strain 9953L55 chromosome, complete genome	2263191	1435543	1445228	2263191		Staphylococcus_phage(50.0%)	8	NA	NA
AWI51249.1|1435543_1437949_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	55.4	5.3e-231
AWI51250.1|1438383_1439499_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.7	1.9e-50
AWI51251.1|1439621_1440269_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	42.8	1.0e-43
AWI51252.1|1440316_1441516_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	7.7e-106
AWI51253.1|1441586_1442048_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	56.8	1.5e-41
AWI51254.1|1442985_1443723_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
AWI51255.1|1443753_1444143_-	RidA family protein	NA	NA	NA	NA	NA
AWI51256.1|1444226_1445228_+	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	43.2	2.2e-69
>prophage 4
CP029206	Actinobacillus porcitonsillarum strain 9953L55 chromosome, complete genome	2263191	1602766	1686279	2263191	tRNA,transposase,capsid,portal,holin,protease,head,tail,terminase,integrase	Haemophilus_virus(38.46%)	89	1602306:1602324	1629360:1629378
1602306:1602324	attL	ATATGGGCAGTAGCGAAAA	NA	NA	NA	NA
AWI51376.1|1602766_1603756_-|integrase	site-specific integrase	integrase	A0A0M3LQN1	Mannheimia_phage	56.8	7.0e-97
AWI51377.1|1604160_1604493_-	DUF496 domain-containing protein	NA	NA	NA	NA	NA
AWI51378.1|1604710_1606228_+	exopolyphosphatase	NA	NA	NA	NA	NA
AWI51379.1|1606426_1606894_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
AWI51380.1|1606910_1607810_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AWI51381.1|1607935_1609024_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	NA	M1Q1P2	Streptococcus_phage	46.6	3.0e-85
AWI51382.1|1609156_1610254_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	24.6	3.6e-17
AWI51383.1|1610331_1610940_+	DNA glycosylase	NA	NA	NA	NA	NA
AWI51384.1|1610929_1611751_+	PHP domain-containing protein	NA	NA	NA	NA	NA
AWI51385.1|1611984_1612995_-|integrase	integrase	integrase	Q1I119	Pasteurella_virus	52.5	4.6e-96
AWI51386.1|1613011_1613275_-	hypothetical protein	NA	A0A0R6PIB1	Moraxella_phage	61.0	1.0e-10
AWI51387.1|1613310_1614156_-	hypothetical protein	NA	NA	NA	NA	NA
AWI51388.1|1614160_1614850_-	phage repressor	NA	A0A0M3LPF9	Mannheimia_phage	61.6	3.8e-73
AWI51389.1|1614997_1615207_+	transcriptional regulator	NA	Q19UN8	Mannheimia_phage	62.5	7.0e-15
AWI51390.1|1615190_1615412_+	regulator	NA	NA	NA	NA	NA
AWI51391.1|1615420_1615678_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51392.1|1615674_1615881_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51393.1|1615871_1616078_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51394.1|1616074_1616368_+	hypothetical protein	NA	Q19US9	Mannheimia_phage	51.8	1.8e-24
AWI51395.1|1616364_1618716_+	replication endonuclease	NA	Q19US8	Mannheimia_phage	67.1	2.6e-307
AWI51396.1|1618726_1618951_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51397.1|1618953_1619265_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51398.1|1619335_1619596_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51399.1|1619606_1620062_+	hypothetical protein	NA	S5M9Z4	Pseudoalteromonas_phage	48.9	5.2e-31
AWI51400.1|1620054_1620462_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51401.1|1620481_1620697_-	hypothetical protein	NA	NA	NA	NA	NA
AWI51402.1|1620999_1621275_-	transcriptional regulator	NA	Q1I103	Pasteurella_virus	57.5	1.4e-23
AWI51403.1|1621349_1622378_-|portal	phage portal protein	portal	Q94MZ7	Haemophilus_virus	77.0	3.9e-151
AWI51404.1|1622380_1624186_-|terminase	terminase	terminase	Q94MZ6	Haemophilus_virus	71.7	7.2e-257
AWI51987.1|1624392_1625244_+|capsid	phage capsid protein	capsid	Q94MZ5	Haemophilus_virus	62.7	9.4e-50
AWI51405.1|1625246_1626275_+|capsid	phage major capsid protein, P2 family	capsid	Q1I0Z9	Pasteurella_virus	62.1	2.3e-114
AWI51406.1|1626277_1627114_+|terminase	terminase	terminase	Q94MZ3	Haemophilus_virus	61.2	5.2e-93
AWI51407.1|1627113_1627566_+|head	head stabilization protein	head	Q94MZ2	Haemophilus_virus	70.7	2.8e-53
AWI51408.1|1627553_1628030_+	hypothetical protein	NA	Q94MZ1	Haemophilus_virus	58.0	1.2e-49
AWI51988.1|1628044_1628716_+	hypothetical protein	NA	Q1I0Z5	Pasteurella_virus	52.9	4.5e-47
AWI51409.1|1628731_1629862_+	DUF2586 domain-containing protein	NA	Q94MY9	Haemophilus_virus	73.6	1.5e-164
1629360:1629378	attR	ATATGGGCAGTAGCGAAAA	NA	NA	NA	NA
AWI51410.1|1629865_1630318_+	DUF2597 domain-containing protein	NA	Q94MY8	Haemophilus_virus	80.6	1.0e-63
AWI51411.1|1630440_1630680_+|holin	holin	holin	Q94MY7	Haemophilus_virus	61.3	6.3e-20
AWI51412.1|1630666_1631212_+	lysozyme	NA	Q94MY6	Haemophilus_virus	54.5	4.3e-48
AWI51413.1|1631213_1631537_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51414.1|1631734_1632046_+	hypothetical protein	NA	Q1I0Y9	Pasteurella_virus	70.3	2.9e-33
AWI51415.1|1632250_1634377_+|tail	phage tail tape measure protein	tail	Q1I0Y7	Pasteurella_virus	44.4	1.7e-135
AWI51416.1|1634376_1634709_+	DUF2590 domain-containing protein	NA	Q94MY3	Haemophilus_virus	76.9	1.7e-39
AWI51417.1|1634705_1635878_+	hypothetical protein	NA	Q94MY2	Haemophilus_virus	62.2	4.8e-137
AWI51989.1|1635873_1636401_+|tail	phage tail protein	tail	Q1I0Y4	Pasteurella_virus	60.0	2.1e-52
AWI51418.1|1639153_1639852_+|tail	phage tail protein	tail	A0A0M3LRX2	Mannheimia_phage	59.2	2.7e-63
AWI51419.1|1639848_1640094_+	DNA helicase UvrD	NA	A0A0M3LNN9	Mannheimia_phage	70.0	1.1e-22
AWI51420.1|1640113_1640881_+	hypothetical protein	NA	Q94MX8	Haemophilus_virus	61.9	2.5e-81
AWI51421.1|1640864_1641452_+	hypothetical protein	NA	Q94MX7	Haemophilus_virus	77.4	2.0e-51
AWI51422.1|1641453_1643055_+	hypothetical protein	NA	Q94MX6	Haemophilus_virus	68.3	5.1e-214
AWI51423.1|1643496_1643952_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA	NA
AWI51424.1|1643952_1644198_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA	NA
AWI51425.1|1644296_1644776_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AWI51426.1|1644889_1645906_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AWI51427.1|1646143_1646566_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51428.1|1646651_1648043_-	dehydrogenase	NA	NA	NA	NA	NA
AWI51429.1|1648235_1648652_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51430.1|1648667_1649087_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AWI51431.1|1649168_1650113_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AWI51432.1|1650424_1650934_-	DNA-binding protein	NA	NA	NA	NA	NA
AWI51433.1|1652111_1653029_+|tail	phage tail protein	tail	A0A0C4UQS1	Shigella_phage	41.0	2.9e-44
AWI51990.1|1654626_1656579_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51434.1|1657033_1657579_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51435.1|1657562_1658006_-	DNA repair protein	NA	NA	NA	NA	NA
AWI51436.1|1658005_1659046_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AWI51991.1|1659130_1659472_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWI51437.1|1659753_1659966_+|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
AWI51438.1|1659981_1660896_+	restriction endonuclease	NA	NA	NA	NA	NA
AWI51439.1|1660895_1664144_+	helicase	NA	A0A1V0SII8	Klosneuvirus	32.6	3.8e-06
AWI51440.1|1664146_1665106_+	hypothetical protein	NA	F2Y298	Organic_Lake_phycodnavirus	35.1	1.5e-40
AWI51441.1|1665163_1665760_-	hypothetical protein	NA	NA	NA	NA	NA
AWI51442.1|1665770_1665980_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWI51443.1|1666511_1666931_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51444.1|1667209_1668346_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AWI51445.1|1668767_1670150_-	two-component sensor histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	25.9	7.4e-12
AWI51446.1|1670139_1670838_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.1	2.0e-29
AWI51447.1|1671346_1671667_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51448.1|1671828_1672284_+	metal-binding protein	NA	NA	NA	NA	NA
AWI51449.1|1672295_1673843_+	bilirubin oxidase	NA	NA	NA	NA	NA
AWI51450.1|1674210_1675296_+	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	NA	NA	NA	NA	NA
AWI51451.1|1675594_1677613_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AWI51452.1|1677629_1678148_+	hypothetical protein	NA	NA	NA	NA	NA
AWI51453.1|1678138_1678402_-	hypothetical protein	NA	G3M9Y6	Bacillus_virus	45.6	2.6e-06
AWI51454.1|1678403_1680392_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AWI51455.1|1680479_1681526_-	hypothetical protein	NA	NA	NA	NA	NA
AWI51456.1|1682320_1683865_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
AWI51457.1|1683927_1684302_-	invasion protein expression up-regulator SirB	NA	NA	NA	NA	NA
AWI51458.1|1684302_1684836_-	ribosome-associated protein	NA	NA	NA	NA	NA
AWI51459.1|1684929_1686279_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
>prophage 5
CP029206	Actinobacillus porcitonsillarum strain 9953L55 chromosome, complete genome	2263191	2125258	2132392	2263191		Organic_Lake_phycodnavirus(16.67%)	7	NA	NA
AWI51826.1|2125258_2126917_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.5	4.7e-21
AWI51827.1|2126903_2128658_-	ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	25.1	9.1e-15
AWI51828.1|2128949_2129621_-	uracil-DNA glycosylase	NA	A0A0R5YU95	Harp_seal_herpesvirus	50.7	4.4e-50
AWI51829.1|2129802_2130189_+	autonomous glycyl radical cofactor GrcA	NA	A0A088FS37	Shigella_phage	61.4	2.4e-32
AWI51830.1|2130357_2130804_+	transcriptional regulator	NA	NA	NA	NA	NA
AWI51831.1|2130852_2131440_-	hypothetical protein	NA	S5MM68	Bacillus_phage	39.8	3.4e-14
AWI51832.1|2131552_2132392_-	deoxyribonuclease IV	NA	A0A1V0SBL9	Catovirus	33.8	1.8e-29
