assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003122385.1_ASM312238v1	CP029255	Flavobacterium sp. HYN0056 chromosome, complete genome	1	82955-83073	1	CRISPRCasFinder	no		WYL,PD-DExK,csa3,cas3,DEDDh	Orphan	GCCAGAATCTAGAAGTTAAACCTACAAGGTT	31	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,csa3,cas3,DEDDh	NA|133aa|up_9|CP029255.1_73075_73474_+,NA|551aa|up_7|CP029255.1_74073_75726_+,NA|125aa|up_3|CP029255.1_81015_81390_-,NA|72aa|up_2|CP029255.1_81536_81752_+,NA	NA|133aa|up_9|CP029255.1_73075_73474_+	NA	NA|184aa|up_8|CP029255.1_73525_74077_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|551aa|up_7|CP029255.1_74073_75726_+	NA	NA|175aa|up_6|CP029255.1_75770_76295_+	pfam08877, MepB, MepB protein	NA|1148aa|up_5|CP029255.1_76354_79798_-	cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like	NA|252aa|up_4|CP029255.1_80103_80859_-	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|125aa|up_3|CP029255.1_81015_81390_-	NA	NA|72aa|up_2|CP029255.1_81536_81752_+	NA	NA|191aa|up_1|CP029255.1_81801_82374_+	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|152aa|up_0|CP029255.1_82445_82901_+	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|260aa|down_0|CP029255.1_83100_83880_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|139aa|down_1|CP029255.1_83978_84395_-	pfam13366, PDDEXK_3, PD-(D/E)XK nuclease superfamily	NA|343aa|down_2|CP029255.1_84539_85568_-	pfam01032, FecCD, FecCD transport family	NA|381aa|down_3|CP029255.1_85569_86712_-	cd01141, TroA_d, Periplasmic binding protein TroA_d	NA|121aa|down_4|CP029255.1_86806_87169_+	pfam17653, DUF5522, Family of unknown function (DUF5522)	NA|170aa|down_5|CP029255.1_87286_87796_+	pfam02283, CobU, Cobinamide kinase / cobinamide phosphate guanyltransferase	NA|560aa|down_6|CP029255.1_87923_89603_+	pfam02277, DBI_PRT, Phosphoribosyltransferase	NA|144aa|down_7|CP029255.1_89660_90092_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|266aa|down_8|CP029255.1_90275_91073_+	PRK00235, cobS, cobalamin synthase; Reviewed	NA|178aa|down_9|CP029255.1_91057_91591_+	TIGR03162, Adenosylcobalamin/alpha-ribazole_phosphatase, alpha-ribazole phosphatase
GCA_003122385.1_ASM312238v1	CP029255	Flavobacterium sp. HYN0056 chromosome, complete genome	2	803244-803349	2	CRISPRCasFinder	no	WYL	WYL,PD-DExK,csa3,cas3,DEDDh	Unclear	CCTAACAGGTTTTAGAAACCTGTTAGG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,csa3,cas3,DEDDh	NA|136aa|up_9|CP029255.1_789466_789874_-,NA|176aa|up_7|CP029255.1_791114_791642_-,NA|119aa|up_6|CP029255.1_791742_792099_-,NA|445aa|down_3|CP029255.1_810830_812165_-	NA|136aa|up_9|CP029255.1_789466_789874_-	NA	NA|340aa|up_8|CP029255.1_789980_791000_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|176aa|up_7|CP029255.1_791114_791642_-	NA	NA|119aa|up_6|CP029255.1_791742_792099_-	NA	NA|182aa|up_5|CP029255.1_792341_792887_+	pfam02674, Colicin_V, Colicin V production protein	NA|803aa|up_4|CP029255.1_793080_795489_-	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|649aa|up_3|CP029255.1_795674_797621_-	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase	NA|497aa|up_2|CP029255.1_797735_799226_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|746aa|up_1|CP029255.1_799323_801561_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|524aa|up_0|CP029255.1_801651_803223_-	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39	NA|669aa|down_0|CP029255.1_803364_805371_-	pfam10566, Glyco_hydro_97, Glycoside hydrolase 97	NA|800aa|down_1|CP029255.1_805746_808146_-	cd06593, GH31_xylosidase_YicI, alpha-xylosidase YicI-like	NA|828aa|down_2|CP029255.1_808269_810753_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|445aa|down_3|CP029255.1_810830_812165_-	NA	NA|525aa|down_4|CP029255.1_812222_813797_-	cd08977, SusD, starch binding outer membrane protein SusD	NA|1043aa|down_5|CP029255.1_813808_816937_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|239aa|down_6|CP029255.1_817504_818221_+	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|234aa|down_7|CP029255.1_818268_818970_+	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|599aa|down_8|CP029255.1_819132_820929_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|206aa|down_9|CP029255.1_821154_821772_+	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain
GCA_003122385.1_ASM312238v1	CP029255	Flavobacterium sp. HYN0056 chromosome, complete genome	3	1256208-1256280	3	CRISPRCasFinder	no		WYL,PD-DExK,csa3,cas3,DEDDh	Orphan	TGTTTCATTTTATAAAATGAAAC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,csa3,cas3,DEDDh	NA|135aa|up_9|CP029255.1_1248660_1249065_-,NA|116aa|up_7|CP029255.1_1249897_1250245_+,NA|270aa|down_2|CP029255.1_1259352_1260162_+	NA|135aa|up_9|CP029255.1_1248660_1249065_-	NA	NA|196aa|up_8|CP029255.1_1249048_1249636_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|116aa|up_7|CP029255.1_1249897_1250245_+	NA	NA|158aa|up_6|CP029255.1_1250297_1250771_-	PRK00203, rnhA, ribonuclease H; Reviewed	NA|188aa|up_5|CP029255.1_1250867_1251431_-	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART)	NA|79aa|up_4|CP029255.1_1251606_1251843_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|418aa|up_3|CP029255.1_1252078_1253332_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|247aa|up_2|CP029255.1_1253341_1254082_+	TIGR02191, Ribonuclease_3, ribonuclease III, bacterial	NA|163aa|up_1|CP029255.1_1254207_1254696_+	NF033205, IPExxxVDY, IPExxxVDY family protein	NA|478aa|up_0|CP029255.1_1254701_1256135_+	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism]	NA|561aa|down_0|CP029255.1_1256519_1258202_+	cd16142, ARS_like, uncharacterized arylsulfatase subfamily	NA|338aa|down_1|CP029255.1_1258265_1259279_+	pfam12710, HAD, haloacid dehalogenase-like hydrolase	NA|270aa|down_2|CP029255.1_1259352_1260162_+	NA	NA|492aa|down_3|CP029255.1_1260181_1261657_+	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|468aa|down_4|CP029255.1_1261680_1263084_+	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|467aa|down_5|CP029255.1_1263120_1264521_+	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252)	NA|193aa|down_6|CP029255.1_1264777_1265356_+	pfam13590, DUF4136, Domain of unknown function (DUF4136)	NA|392aa|down_7|CP029255.1_1265479_1266655_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|323aa|down_8|CP029255.1_1266716_1267685_+	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation	NA|384aa|down_9|CP029255.1_1267735_1268887_+	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane]
GCA_003122385.1_ASM312238v1	CP029255	Flavobacterium sp. HYN0056 chromosome, complete genome	4	1816077-1816162	4	CRISPRCasFinder	no		WYL,PD-DExK,csa3,cas3,DEDDh	Orphan	TTGGAATTTGGAATTTTGTTTTTG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,csa3,cas3,DEDDh	NA,NA	NA|270aa|up_9|CP029255.1_1806993_1807803_+	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein	NA|237aa|up_8|CP029255.1_1807799_1808510_+	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein	NA|234aa|up_7|CP029255.1_1808537_1809239_+	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein	NA|890aa|up_6|CP029255.1_1809240_1811910_+	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|139aa|up_5|CP029255.1_1811912_1812329_-	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|159aa|up_4|CP029255.1_1812485_1812962_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|130aa|up_3|CP029255.1_1812991_1813381_+	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|384aa|up_2|CP029255.1_1813435_1814587_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|292aa|up_1|CP029255.1_1814746_1815622_+	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|124aa|up_0|CP029255.1_1815656_1816028_+	pfam11325, DUF3127, Domain of unknown function (DUF3127)	NA|213aa|down_0|CP029255.1_1816191_1816830_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|265aa|down_1|CP029255.1_1816831_1817626_+	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only]	NA|237aa|down_2|CP029255.1_1817622_1818333_-	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA	NA|371aa|down_3|CP029255.1_1818381_1819494_-	PRK09240, thiH, 2-iminoacetate synthase ThiH	NA|126aa|down_4|CP029255.1_1819534_1819912_-	TIGR04256, conserved_hypothetical_protein, GxxExxY protein	NA|259aa|down_5|CP029255.1_1820046_1820823_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|213aa|down_6|CP029255.1_1820803_1821442_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|251aa|down_7|CP029255.1_1821434_1822187_-	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1	NA|207aa|down_8|CP029255.1_1822144_1822765_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|608aa|down_9|CP029255.1_1822803_1824627_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional
GCA_003122385.1_ASM312238v1	CP029255	Flavobacterium sp. HYN0056 chromosome, complete genome	5	2082064-2082174	5	CRISPRCasFinder	no		WYL,PD-DExK,csa3,cas3,DEDDh	Orphan	TTTTGTCATCCTGAGAAACGAAGGATCACACAAGAAA	37	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,csa3,cas3,DEDDh	NA|66aa|up_8|CP029255.1_2073890_2074088_-,NA|85aa|up_7|CP029255.1_2074099_2074354_-,NA|155aa|down_1|CP029255.1_2083167_2083632_-,NA|330aa|down_5|CP029255.1_2086176_2087166_+,NA|71aa|down_6|CP029255.1_2087201_2087414_+	NA|97aa|up_9|CP029255.1_2073485_2073776_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|66aa|up_8|CP029255.1_2073890_2074088_-	NA	NA|85aa|up_7|CP029255.1_2074099_2074354_-	NA	NA|263aa|up_6|CP029255.1_2074576_2075365_+	cd20170, Peptidase_M90-like, uncharacterized M90 peptidase family-like  proteins	NA|284aa|up_5|CP029255.1_2075490_2076342_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|227aa|up_4|CP029255.1_2076491_2077172_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|610aa|up_3|CP029255.1_2077287_2079117_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|289aa|up_2|CP029255.1_2079280_2080147_-	pfam04072, LCM, Leucine carboxyl methyltransferase	NA|155aa|up_1|CP029255.1_2080160_2080625_-	COG4539, COG4539, Predicted membrane protein [Function unknown]	NA|409aa|up_0|CP029255.1_2080722_2081949_-	pfam12576, DUF3754, Protein of unknown function (DUF3754)	NA|106aa|down_0|CP029255.1_2082364_2082682_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|155aa|down_1|CP029255.1_2083167_2083632_-	NA	NA|121aa|down_2|CP029255.1_2083946_2084309_+	COG4270, COG4270, Predicted membrane protein [Function unknown]	NA|237aa|down_3|CP029255.1_2084316_2085027_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|333aa|down_4|CP029255.1_2084999_2085998_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|330aa|down_5|CP029255.1_2086176_2087166_+	NA	NA|71aa|down_6|CP029255.1_2087201_2087414_+	NA	NA|510aa|down_7|CP029255.1_2087730_2089260_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|303aa|down_8|CP029255.1_2089455_2090364_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|280aa|down_9|CP029255.1_2090454_2091294_+	PRK06180, PRK06180, short chain dehydrogenase; Provisional
GCA_003122385.1_ASM312238v1	CP029255	Flavobacterium sp. HYN0056 chromosome, complete genome	6	5402836-5403020	1,6	PILER-CR,CRISPRCasFinder	no		WYL,PD-DExK,csa3,cas3,DEDDh	Orphan	TCCAATCTGACGTTAGACGCACTGCAGTGCGTCTCTACAGATAT,CGTTAGACGCACTGCAGTGCGTCTCTACAGATAT	44,34	0	0	NA	NA	NA:NA	2,1	2	Orphan	WYL,PD-DExK,csa3,cas3,DEDDh	NA,NA	NA|417aa|up_9|CP029255.1_5393157_5394408_-	TIGR01885, Ornithine_aminotransferase, ornithine aminotransferase	NA|151aa|up_8|CP029255.1_5394631_5395084_+	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|258aa|up_7|CP029255.1_5395191_5395965_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|324aa|up_6|CP029255.1_5396007_5396979_+	pfam12412, DUF3667, Protein of unknown function (DUF3667)	NA|339aa|up_5|CP029255.1_5396989_5398006_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|602aa|up_4|CP029255.1_5398168_5399974_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|137aa|up_3|CP029255.1_5400157_5400568_+	pfam14126, DUF4293, Domain of unknown function (DUF4293)	NA|220aa|up_2|CP029255.1_5400689_5401349_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|307aa|up_1|CP029255.1_5401360_5402281_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|165aa|up_0|CP029255.1_5402282_5402777_-	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|245aa|down_0|CP029255.1_5403157_5403892_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|585aa|down_1|CP029255.1_5404043_5405798_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|526aa|down_2|CP029255.1_5405814_5407392_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|866aa|down_3|CP029255.1_5407477_5410075_+	pfam16313, DUF4953, Met-zincin	NA|1113aa|down_4|CP029255.1_5410091_5413430_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|440aa|down_5|CP029255.1_5413442_5414762_+	pfam14322, SusD-like_3, Starch-binding associating with outer membrane	NA|255aa|down_6|CP029255.1_5414876_5415641_+	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|195aa|down_7|CP029255.1_5415865_5416450_+	pfam07463, NUMOD4, NUMOD4 motif	NA|463aa|down_8|CP029255.1_5417213_5418602_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|250aa|down_9|CP029255.1_5419045_5419795_+	pfam10077, DUF2314, Uncharacterized protein conserved in bacteria (DUF2314)
