The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029352	Azospirillum thiophilum strain CFH 70021 chromosome 1, complete sequence	1351902	346148	380444	1351902	transposase,capsid,portal,integrase,terminase	Synechococcus_phage(15.0%)	41	375979:375995	384531:384547
AWK85029.1|346148_347384_-	hypothetical protein	NA	A0A0S0MV10	Pseudomonas_phage	27.4	1.1e-17
AWK85030.1|347461_347926_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85031.1|347922_348558_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85032.1|348561_348885_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85033.1|348881_349451_-	hypothetical protein	NA	B0VK37	Azospirillum_phage	32.9	3.6e-13
AWK85034.1|349507_350929_-|transposase	IS4 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.8	2.0e-60
AWK85035.1|351036_351465_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85036.1|351526_352789_-|capsid	phage major capsid protein	capsid	A0A192Y5T6	Salmonella_phage	43.0	1.9e-83
AWK85037.1|352800_353637_-	peptidase	NA	Q3HQS9	Burkholderia_phage	57.9	1.4e-69
AWK85813.1|353614_354787_-|portal	phage portal protein	portal	Q3HQS8	Burkholderia_phage	48.3	2.5e-93
AWK85038.1|354916_356707_-|terminase	phage terminase small subunit P27 family	terminase	A0A0U2C138	Paracoccus_phage	45.7	2.1e-136
AWK85039.1|356663_357131_-|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	57.1	2.0e-41
AWK85040.1|357229_357562_-	HNH endonuclease	NA	B0VK27	Azospirillum_phage	55.5	3.6e-29
AWK85041.1|357561_357774_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85042.1|357770_358106_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85043.1|358423_358615_+	transcriptional regulator	NA	NA	NA	NA	NA
AWK85044.1|358834_359365_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85045.1|359729_361820_-	hypothetical protein	NA	A0A291LAR9	Bordetella_phage	36.6	1.1e-75
AWK85046.1|361955_362153_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85047.1|362516_362882_-	VRR-NUC domain-containing protein	NA	A0A2I5ARE6	Synechococcus_phage	50.9	2.6e-20
AWK85814.1|362878_363538_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85048.1|363546_365103_-	helicase	NA	G8EY40	Synechococcus_phage	38.0	2.6e-82
AWK85049.1|365109_366129_-	site-specific DNA-methyltransferase	NA	F4YCV3	Synechococcus_phage	37.8	7.3e-57
AWK85050.1|366121_367546_-	helicase	NA	F8TUW6	EBPR_podovirus	48.1	2.4e-106
AWK85051.1|368303_368729_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85052.1|368725_368938_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85053.1|368966_369764_+	hypothetical protein	NA	A0A141GF24	Brucella_phage	42.9	6.0e-22
AWK85054.1|369825_370080_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85055.1|370422_371049_-	hypothetical protein	NA	S5WJ01	Leptospira_phage	32.7	5.6e-07
AWK85056.1|371663_372380_-	nuclease	NA	A0A0R6PHV6	Moraxella_phage	36.2	1.6e-10
AWK85057.1|372621_372813_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85058.1|373056_373365_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85059.1|373361_373577_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85060.1|373579_374737_+	exodeoxyribonuclease V	NA	A0A291LA07	Bordetella_phage	41.1	2.8e-65
AWK85061.1|374736_375147_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85062.1|375155_376022_+	hypothetical protein	NA	NA	NA	NA	NA
375979:375995	attL	CCGGCGCCCGGCTGGTG	NA	NA	NA	NA
AWK85063.1|376052_377492_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85064.1|377541_377961_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85065.1|377967_379083_+	hypothetical protein	NA	A0A0A8IL17	Aurantimonas_phage	28.7	9.9e-31
AWK85815.1|379095_379536_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85066.1|379280_380444_+|integrase	integrase	integrase	A0A240F4W2	Ochrobactrum_phage	32.5	3.1e-43
384531:384547	attR	CCGGCGCCCGGCTGGTG	NA	NA	NA	NA
>prophage 2
CP029352	Azospirillum thiophilum strain CFH 70021 chromosome 1, complete sequence	1351902	770432	832933	1351902	transposase	Acinetobacter_phage(23.53%)	50	NA	NA
AWK85360.1|770432_771601_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.7	3.3e-53
AWK85361.1|772099_772282_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85362.1|772206_776805_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85363.1|778018_778336_-	50S ribosomal protein L23	NA	NA	NA	NA	NA
AWK85364.1|778226_778961_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85365.1|779209_779830_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85366.1|780114_780510_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AWK85367.1|780506_781418_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AWK85368.1|781437_781632_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85369.1|781670_782851_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.7	7.4e-53
AWK85370.1|782939_784265_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	42.8	3.1e-84
AWK85371.1|784384_785806_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85372.1|785853_787125_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85373.1|787403_787589_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85374.1|788171_788834_+	acetyl-CoA--acetoacetyl-CoA transferase subunit alpha	NA	NA	NA	NA	NA
AWK85375.1|788826_789483_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AWK85376.1|789570_790944_+	TIGR00366 family protein	NA	NA	NA	NA	NA
AWK85377.1|791035_792211_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
AWK85378.1|792119_794027_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	54.4	1.1e-05
AWK85379.1|794084_794489_-	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
AWK85380.1|794646_797727_-	multidrug efflux protein	NA	S5VTK5	Leptospira_phage	22.3	1.4e-58
AWK85840.1|797743_798982_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AWK85381.1|799004_799739_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AWK85382.1|799956_801921_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85383.1|802250_802913_-	DNA-binding protein	NA	NA	NA	NA	NA
AWK85384.1|803035_805540_-	histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	22.7	6.5e-06
AWK85385.1|805511_806186_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	32.9	5.8e-26
AWK85386.1|806237_807104_-	universal stress protein	NA	NA	NA	NA	NA
AWK85387.1|807117_807807_-	hypothetical protein	NA	W8EBD0	Pseudomonas_phage	34.6	2.7e-15
AWK85388.1|807849_809388_-	tripartite tricarboxylate transporter TctA	NA	NA	NA	NA	NA
AWK85389.1|809463_809946_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AWK85841.1|810019_810976_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWK85390.1|811179_812265_-	hypothetical protein	NA	NA	NA	NA	NA
AWK85391.1|812599_813043_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85392.1|813170_813353_+	hemin uptake protein HemP	NA	NA	NA	NA	NA
AWK85393.1|813456_815649_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	A0A0P0I887	Acinetobacter_phage	30.5	5.1e-07
AWK85842.1|815711_816773_+	hemin-degrading factor	NA	NA	NA	NA	NA
AWK85394.1|816772_817618_+	hemin ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWK85843.1|817632_818670_+	iron ABC transporter	NA	NA	NA	NA	NA
AWK85395.1|818666_819443_+	heme ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.7	2.6e-06
AWK85396.1|819663_820764_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
AWK85397.1|820854_822003_+	polyamine ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	38.3	2.9e-25
AWK85398.1|821999_822932_+	putrescine ABC transporter permease PotH	NA	Q6GZ02	Mycoplasma_phage	28.5	1.1e-11
AWK85399.1|822928_823762_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AWK85400.1|824189_825209_+	agmatine deiminase	NA	O41120	Paramecium_bursaria_Chlorella_virus	38.9	3.2e-68
AWK85401.1|825358_826990_+	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	38.1	7.4e-11
AWK85844.1|827080_827350_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85402.1|828399_829620_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.4	5.5e-43
AWK85403.1|829993_831174_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.7	7.4e-53
AWK85845.1|831670_832933_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	32.5	7.0e-41
>prophage 3
CP029352	Azospirillum thiophilum strain CFH 70021 chromosome 1, complete sequence	1351902	1071243	1081002	1351902		uncultured_Caudovirales_phage(28.57%)	11	NA	NA
AWK85865.1|1071243_1073613_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	76.7	2.5e-07
AWK85578.1|1074021_1074237_+	hypothetical protein	NA	NA	NA	NA	NA
AWK85866.1|1074265_1074424_-	DUF3309 domain-containing protein	NA	NA	NA	NA	NA
AWK85579.1|1074780_1075482_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AWK85580.1|1075502_1076159_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AWK85581.1|1076176_1076638_+	hypothetical protein	NA	W8W1H2	Invertebrate_iridovirus	40.6	1.6e-27
AWK85582.1|1076658_1077657_-	hypothetical protein	NA	K4F9T9	Cronobacter_phage	34.1	5.5e-41
AWK85583.1|1078025_1078301_+	DNA-binding protein HU	NA	A4JWM7	Burkholderia_virus	55.1	2.3e-18
AWK85584.1|1078330_1078741_+	MucR family transcriptional regulator	NA	A0A1P8VVG0	Erythrobacter_phage	49.2	1.0e-25
AWK85585.1|1078983_1079505_-	GNAT family N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	39.2	3.1e-19
AWK85586.1|1080108_1081002_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	33.3	4.6e-31
>prophage 1
CP029358	Azospirillum thiophilum strain CFH 70021 plasmid unnamed3	405625	24263	33672	405625		Methanothermobacter_phage(33.33%)	7	NA	NA
AWK90128.1|24263_25799_-	GNAT family N-acetyltransferase	NA	Q9HH59	Methanothermobacter_phage	29.1	4.1e-35
AWK90127.1|25773_26571_-	Cro/Cl family transcriptional regulator	NA	Q9HH58	Methanothermobacter_phage	31.7	2.6e-09
AWK89857.1|27049_28675_+	2-aminobenzoate-CoA ligase	NA	Q75ZG1	Hepacivirus	24.7	2.0e-24
AWK89858.1|28717_30670_-	acyltransferase	NA	B5WZU0	Pseudomonas_phage	46.3	3.2e-77
AWK89859.1|30807_31590_-	hydroxyacid aldolase	NA	NA	NA	NA	NA
AWK89860.1|31829_32846_+	chromosome partitioning protein	NA	Q7Y3Y6	Yersinia_phage	34.7	3.3e-17
AWK89861.1|32832_33672_+	chromosome partitioning protein	NA	S5VTK0	Leptospira_phage	38.4	1.3e-14
>prophage 1
CP029359	Azospirillum thiophilum strain CFH 70021 plasmid unnamed4	186821	27884	37409	186821		Enterobacteria_phage(42.86%)	10	NA	NA
AWK90177.1|27884_28766_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	60.8	2.7e-100
AWK90178.1|28791_29694_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	36.3	2.0e-29
AWK90179.1|29686_30760_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.3	1.2e-89
AWK90180.1|30802_31357_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	42.8	8.6e-28
AWK90181.1|31463_32393_-	hypothetical protein	NA	A0A1C9C5B8	Heterosigma_akashiwo_virus	28.6	5.9e-21
AWK90182.1|32392_33736_-	class I SAM-dependent methyltransferase	NA	A0A2H4UUL2	Bodo_saltans_virus	38.1	2.4e-68
AWK90183.1|33866_34448_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90184.1|34444_35602_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90185.1|35688_35898_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90186.1|35906_37409_-	glycosyl transferase	NA	A0A0N9P7Z4	Sulfolobales_Virus_YNP2	29.8	6.6e-06
>prophage 2
CP029359	Azospirillum thiophilum strain CFH 70021 plasmid unnamed4	186821	113554	121758	186821	transposase	Trichoplusia_ni_ascovirus(50.0%)	9	NA	NA
AWK90294.1|113554_114298_+	2-deoxy-D-gluconate 3-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.5	7.5e-19
AWK90239.1|114294_115179_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
AWK90240.1|115184_115961_+	hypothetical protein	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.8	8.7e-10
AWK90241.1|115935_116781_+	oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.0	1.1e-05
AWK90242.1|116887_117751_-	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	47.8	1.3e-51
AWK90295.1|117747_119010_-|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	32.5	7.0e-41
AWK90243.1|119160_119910_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90244.1|119933_120860_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90245.1|120741_121758_-	acylneuraminate cytidylyltransferase	NA	A0A140XBD6	Dickeya_phage	33.3	7.1e-12
>prophage 1
CP029360	Azospirillum thiophilum strain CFH 70021 plasmid unnamed5	54887	37735	51431	54887	capsid	Azospirillum_phage(66.67%)	12	NA	NA
AWK90346.1|37735_44503_-	hypothetical protein	NA	I6ZXX9	Escherichia_phage	34.5	1.3e-16
AWK90347.1|44510_45212_-	hypothetical protein	NA	B0VK42	Azospirillum_phage	54.6	1.6e-63
AWK90359.1|45220_45550_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90360.1|45600_46065_-	hypothetical protein	NA	B0VK41	Azospirillum_phage	59.7	1.0e-37
AWK90348.1|46227_47709_-	hypothetical protein	NA	B0VK40	Azospirillum_phage	44.8	1.0e-112
AWK90349.1|47771_47951_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90350.1|47954_48389_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90351.1|48390_48741_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90352.1|48745_49390_-	hypothetical protein	NA	B0VK37	Azospirillum_phage	45.3	1.5e-23
AWK90353.1|49391_49604_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90354.1|49653_50109_-	hypothetical protein	NA	NA	NA	NA	NA
AWK90355.1|50174_51431_-|capsid	phage major capsid protein	capsid	Q8W6U5	Burkholderia_virus	39.6	7.4e-59
