assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003193765.1_ASM319376v1	CP029652	Staphylococcus aureus strain AR_0471 chromosome, complete genome	2	2159191-2159275	1	CRISPRCasFinder	no		cas3,DinG,DEDDh,WYL,csa3	Orphan	CAAGTTGGGGAACGGGGCCCCAACA	25	1	7	2159216-2159250|2159216-2159250|2159216-2159250|2159216-2159250|2159216-2159250|2159216-2159250|2159216-2159250	CP029652.1_522944-522910|CP029652.1_623348-623382|CP029652.1_828213-828247|CP029652.1_2170022-2170056|CP029652.1_2393631-2393597|CP029652.1_736389-736355|CP029652.1_2519118-2519152	NA	1	1	Orphan	cas3,DinG,DEDDh,WYL,csa3	NA,NA|106aa|down_6|CP029652.1_2168019_2168337_-,NA|55aa|down_7|CP029652.1_2168581_2168746_-	NA|202aa|up_9|CP029652.1_2152030_2152636_+	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|335aa|up_8|CP029652.1_2152803_2153808_+	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|169aa|up_7|CP029652.1_2153837_2154344_+	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|165aa|up_6|CP029652.1_2154345_2154840_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|420aa|up_5|CP029652.1_2154902_2156162_+	cd00887, MoeA, MoeA family	NA|162aa|up_4|CP029652.1_2156158_2156644_+	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|149aa|up_3|CP029652.1_2156657_2157104_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|78aa|up_2|CP029652.1_2157109_2157343_+	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|200aa|up_1|CP029652.1_2157349_2157949_+	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|310aa|up_0|CP029652.1_2158061_2158991_+	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|117aa|down_0|CP029652.1_2159631_2159982_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|404aa|down_1|CP029652.1_2160083_2161295_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|147aa|down_2|CP029652.1_2161287_2161728_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|255aa|down_3|CP029652.1_2161890_2162655_+	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|422aa|down_4|CP029652.1_2163286_2164552_+	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|1056aa|down_5|CP029652.1_2164668_2167836_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|106aa|down_6|CP029652.1_2168019_2168337_-	NA	NA|55aa|down_7|CP029652.1_2168581_2168746_-	NA	NA|303aa|down_8|CP029652.1_2168878_2169787_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|288aa|down_9|CP029652.1_2170440_2171304_-	COG4975, GlcU, Putative glucose uptake permease [Carbohydrate transport and metabolism]
GCA_003193765.1_ASM319376v1	CP029652	Staphylococcus aureus strain AR_0471 chromosome, complete genome	3	2197728-2197860	2	CRISPRCasFinder	no		cas3,DinG,DEDDh,WYL,csa3	Orphan	GAAACCAATGATATCAAGGGTTTTGTGAGCTTTCGAGTAAAGAG	44	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,WYL,csa3	NA,NA|197aa|down_7|CP029652.1_2205589_2206180_-	NA|130aa|up_9|CP029652.1_2189203_2189593_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|315aa|up_8|CP029652.1_2189667_2190612_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|123aa|up_7|CP029652.1_2190628_2190997_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|270aa|up_6|CP029652.1_2191534_2192344_+	PRK13648, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|287aa|up_5|CP029652.1_2192340_2193201_+	PRK13646, cbiO, energy-coupling factor transporter ATPase	NA|269aa|up_4|CP029652.1_2193190_2193997_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|268aa|up_3|CP029652.1_2194001_2194805_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|146aa|up_2|CP029652.1_2195044_2195482_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|131aa|up_1|CP029652.1_2195501_2195894_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|479aa|up_0|CP029652.1_2196242_2197679_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|555aa|down_0|CP029652.1_2199423_2201088_+	PRK08617, PRK08617, acetolactate synthase AlsS	NA|235aa|down_1|CP029652.1_2201124_2201829_+	COG3527, AlsD, Alpha-acetolactate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|142aa|down_2|CP029652.1_2202203_2202629_-	pfam03642, MAP, MAP domain	NA|272aa|down_3|CP029652.1_2202923_2203739_+	cd02605, HAD_SPP, sucrose-phosphatase, similar to Synechocystis sp PCC 6803 SPP	NA|118aa|down_4|CP029652.1_2204048_2204402_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|168aa|down_5|CP029652.1_2204565_2205069_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|119aa|down_6|CP029652.1_2205177_2205534_-	pfam13627, LPAM_2, Prokaryotic lipoprotein-attachment site	NA|197aa|down_7|CP029652.1_2205589_2206180_-	NA	NA|349aa|down_8|CP029652.1_2206186_2207233_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|616aa|down_9|CP029652.1_2207222_2209070_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins
GCA_003193765.1_ASM319376v1	CP029652	Staphylococcus aureus strain AR_0471 chromosome, complete genome	4	2290135-2290223	3	CRISPRCasFinder	no	csa3	cas3,DinG,DEDDh,WYL,csa3	Type I-A	TGCATAAGAGCCCCTAACAACTAAAGTTTAAG	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,WYL,csa3	NA,NA|364aa|down_0|CP029652.1_2290236_2291328_-,NA|77aa|down_5|CP029652.1_2295114_2295345_+	NA|452aa|up_9|CP029652.1_2270760_2272116_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|1777aa|up_8|CP029652.1_2272399_2277730_+	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain	NA|639aa|up_7|CP029652.1_2277841_2279758_+	pfam07564, DUF1542, Domain of Unknown Function (DUF1542)	NA|369aa|up_6|CP029652.1_2280080_2281187_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|145aa|up_5|CP029652.1_2281186_2281621_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|711aa|up_4|CP029652.1_2281632_2283765_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|517aa|up_3|CP029652.1_2283799_2285350_-	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|602aa|up_2|CP029652.1_2286030_2287836_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|261aa|up_1|CP029652.1_2288068_2288851_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|286aa|up_0|CP029652.1_2288918_2289776_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|364aa|down_0|CP029652.1_2290236_2291328_-	NA	NA|326aa|down_1|CP029652.1_2291593_2292571_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	csa3|107aa|down_2|CP029652.1_2292572_2292893_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|222aa|down_3|CP029652.1_2293044_2293710_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|313aa|down_4|CP029652.1_2294145_2295084_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|77aa|down_5|CP029652.1_2295114_2295345_+	NA	NA|458aa|down_6|CP029652.1_2296018_2297392_+	pfam01878, EVE, EVE domain	NA|138aa|down_7|CP029652.1_2297849_2298263_+	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|148aa|down_8|CP029652.1_2298462_2298906_+	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|237aa|down_9|CP029652.1_2299026_2299737_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase
