The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	358785	411569	2910130	integrase,portal,protease,head,tail,capsid,holin	Staphylococcus_phage(92.86%)	73	367629:367646	392126:392143
AWR12329.1|358785_359529_-|protease	CAAX protease self-immunity family protein	protease	NA	NA	NA	NA
AWR12330.1|359703_359988_+	10 kDa chaperonin	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
AWR12331.1|360063_361680_+	chaperonin GroL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
AWR12332.1|362219_363527_-	ktr system potassium uptake protein B	NA	NA	NA	NA	NA
AWR12333.1|363970_365194_-	putative succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AWR12334.1|365629_366685_+	hypothetical protein	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
AWR12335.1|366706_367723_+	gamma-hemolysin component B	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
367629:367646	attL	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
AWR12336.1|367960_368785_-	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	99.6	8.9e-162
AWR12337.1|368841_369879_-|integrase	integrase	integrase	Q38086	Staphylococcus_phage	99.7	2.2e-178
AWR12338.1|370069_370783_-	pemK-like family protein	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
AWR12339.1|370861_371044_-	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	96.7	6.9e-27
AWR12340.1|371114_371300_-	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
AWR12341.1|371296_371443_-	hypothetical protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
AWR12342.1|371516_372371_-	HIRAN domain protein	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
AWR12343.1|372382_373099_-	helix-turn-helix family protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
AWR12344.1|373262_373505_+	cro/C1-type HTH DNA-binding domain protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
AWR12345.1|373517_373961_+	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
AWR12346.1|373975_374116_+	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
AWR12347.1|374108_374318_-	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
AWR12348.1|374374_375124_+	phage antirepressor KilAC domain protein	NA	B7T097	Staphylococcus_virus	99.6	3.4e-136
AWR12349.1|375139_375337_+	putative phi PVL orf 35-like protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
AWR12350.1|375323_375704_-	hypothetical protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
AWR12351.1|375758_376082_+	hypothetical protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
AWR12352.1|376078_376240_+	hypothetical protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
AWR12353.1|376334_376637_+	hypothetical protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
AWR12354.1|376641_376902_+	hypothetical protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
AWR12355.1|377182_379126_+	hypothetical protein	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
AWR12356.1|379127_380048_+	recT family protein	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
AWR12357.1|380260_380746_+	beta-lactamase superfamily domain protein	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	9.4e-87
AWR12358.1|380746_381217_+	single-stranded DNA-binding family protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
AWR12359.1|381246_382140_+	dnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
AWR12360.1|382146_382365_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
AWR12361.1|382373_382778_+	endodeoxyribonuclease RusA family protein	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
AWR12362.1|382790_383162_+	PVL ORF-50-like family protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
AWR12363.1|383161_383419_+	hypothetical protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
AWR12364.1|383421_383664_+	phage family protein	NA	A0A2H4PQJ3	Staphylococcus_phage	98.8	1.2e-39
AWR12365.1|383678_383924_+	hypothetical protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
AWR12366.1|383920_384457_+	dUTPase family protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
AWR12367.1|384493_384739_+	putative membrane protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
AWR12368.1|384735_384942_+	hypothetical protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
AWR12369.1|384938_385088_+	transcriptional activator RinB family protein	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
AWR12370.1|385087_385288_+	hypothetical protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
AWR12371.1|385315_385732_+	phage transcriptional regulator, RinA family protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
AWR12372.1|385963_386263_+	HNH endonuclease family protein	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
AWR12373.1|386393_386738_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
AWR12374.1|386734_388396_+	phage Terminase family protein	NA	A0A075M4D3	Staphylococcus_phage	100.0	0.0e+00
AWR12375.1|388411_389575_+|portal	phage portal protein, HK97 family	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
AWR12376.1|389558_390296_+|protease	clp protease family protein	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
AWR12377.1|390318_391464_+|capsid	phage major capsid protein, HK97 family	capsid	A0A1W6JPL4	Staphylococcus_phage	99.7	7.3e-215
AWR12378.1|391483_391768_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	97.9	5.2e-45
AWR12379.1|391757_392042_+|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
AWR12380.1|392025_392388_+|head,tail	phage head-tail joining family protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
392126:392143	attR	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
AWR12381.1|392384_392789_+	hypothetical protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
AWR12382.1|392785_393193_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
AWR12383.1|393193_393838_+|tail	phage major tail, phi13 family protein	tail	G4KNQ7	Staphylococcus_phage	99.1	1.9e-119
AWR12384.1|393963_394104_+	bacterial Ig-like domain family protein	NA	A0A2I6PDK6	Staphylococcus_phage	100.0	2.5e-16
AWR12385.1|394153_394504_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
AWR12386.1|394554_394692_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
AWR12387.1|394748_399281_+|tail	phage tail tape measure protein, TP901 family, core region	tail	A0EX03	Staphylococcus_phage	98.9	0.0e+00
AWR12388.1|399277_400762_+|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
AWR12389.1|400777_404563_+	phage minor structural, N-terminal region domain protein	NA	Q6R866	Staphylococcus_virus	98.3	0.0e+00
AWR12390.1|404552_404705_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
AWR12391.1|404751_405039_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
AWR12392.1|405162_405393_+	hypothetical protein	NA	D2JLG2	Staphylococcus_phage	100.0	1.2e-31
AWR12393.1|405584_405719_+	putative membrane protein	NA	D2JLG3	Staphylococcus_phage	100.0	9.3e-13
AWR12394.1|405930_406185_+|holin	holin, phage phi LC3 family	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AWR12395.1|406196_406952_+	CHAP domain protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
AWR12396.1|407142_407634_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
AWR12397.1|408322_408619_+	bacterial SH3 domain protein	NA	A0A1P8L6B4	Staphylococcus_phage	100.0	1.3e-51
AWR12398.1|408713_409163_-	chemotaxis inhibitory protein	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
AWR12399.1|409846_410197_+	complement inhibitor	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
AWR12400.1|410249_410441_-	putative membrane protein	NA	M9NS66	Staphylococcus_phage	100.0	1.7e-23
AWR12401.1|411371_411569_-	phospholipase C domain protein	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
>prophage 2
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	500524	616981	2910130	tRNA,transposase,protease,integrase	Staphylococcus_phage(86.89%)	111	547520:547536	582730:582746
AWR12482.1|500524_501844_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AWR12483.1|502427_503489_+	phosphotransferase system, EIIC family protein	NA	NA	NA	NA	NA
AWR12484.1|503746_505204_+	amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein	NA	NA	NA	NA	NA
AWR12485.1|505196_505919_+	recF/RecN/SMC N terminal domain protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
AWR12486.1|506069_507197_+	epoxyqueuosine reductase	NA	NA	NA	NA	NA
AWR12487.1|507201_507672_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AWR12488.1|507830_508430_+	glucosamine-6-phosphate isomerase family protein	NA	NA	NA	NA	NA
AWR12489.1|508454_508607_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12490.1|509154_509550_+	putative membrane protein	NA	NA	NA	NA	NA
AWR12491.1|509745_511131_+	fumarate hydratase, class II	NA	NA	NA	NA	NA
AWR12492.1|511583_512405_-	RNA pseudouridylate synthase family protein	NA	NA	NA	NA	NA
AWR12493.1|512567_513680_+	histidine kinase family protein	NA	NA	NA	NA	NA
AWR12494.1|513701_514325_+	response regulator	NA	NA	NA	NA	NA
AWR12495.1|514680_515145_+	helix-turn-helix family protein	NA	NA	NA	NA	NA
AWR12496.1|515323_516448_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12497.1|516516_516861_+	hypothetical protein	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
AWR12498.1|517788_518985_+	calcineurin-like phosphoesterase superfamily domain protein	NA	NA	NA	NA	NA
AWR12499.1|518974_521911_+	AAA domain protein	NA	NA	NA	NA	NA
AWR12500.1|521907_522849_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
AWR12501.1|522969_523932_-	foldase protein PrsA	NA	NA	NA	NA	NA
AWR12502.1|524136_524694_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12503.1|525428_525794_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12504.1|525935_526358_-	protein hit	NA	NA	NA	NA	NA
AWR12505.1|526491_527232_+	ABC transporter family protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
AWR12506.1|527224_528448_+	bacterial ABC transporter EcsB family protein	NA	NA	NA	NA	NA
AWR12507.1|528571_529075_-	signal transduction protein TRAP	NA	NA	NA	NA	NA
AWR12508.1|529337_530375_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AWR12509.1|530432_531356_+	ferrochelatase	NA	NA	NA	NA	NA
AWR12510.1|531379_532780_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
AWR12511.1|533102_533657_+	serine hydrolase family protein	NA	NA	NA	NA	NA
AWR12512.1|535034_535799_+	enterotoxin type D	NA	A0A1X9H080	Staphylococcus_phage	37.1	2.3e-31
AWR12513.1|536079_536799_+	toxin beta-grasp domain protein	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
AWR12514.1|536833_537562_+	toxin beta-grasp domain protein	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
AWR12515.1|537769_538117_+	enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	37.9	3.0e-10
AWR12516.1|538091_538487_+	enterotoxin type C-1	NA	A0A097PAT7	Streptococcus_pyogenes_phage	50.4	1.5e-26
AWR12517.1|538525_539281_+	enterotoxin H	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
AWR12518.1|539563_540340_+	enterotoxin type G	NA	NA	NA	NA	NA
AWR12519.1|540891_541668_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12520.1|541688_541925_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12521.1|542002_542497_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12522.1|543330_544119_-	hypothetical protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
AWR12523.1|545482_546418_+	leucotoxin LukEv	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
AWR12524.1|546419_547403_+	leucotoxin LukDv	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
547520:547536	attL	ATTACTTTGCTAAATAG	NA	NA	NA	NA
AWR12525.1|547660_547786_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12526.1|547772_548564_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12527.1|548568_549042_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12528.1|549243_549516_+	putative membrane protein	NA	A0A2H4PQH0	Staphylococcus_phage	83.5	3.1e-31
AWR12529.1|549719_549839_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12530.1|549988_550570_-	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
AWR12531.1|551533_552241_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
AWR12532.1|552365_553088_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
AWR12533.1|553145_553865_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
AWR12534.1|553985_554705_+|protease	serine protease SplF	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AWR12535.1|554862_555030_+|protease	serine protease SplF domain protein	protease	A0A2H4PQP1	Staphylococcus_phage	98.2	3.4e-20
AWR12536.1|555030_555582_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	3.4e-101
AWR12537.1|555942_557499_+	type I restriction-modification system, M subunit	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
AWR12538.1|557491_558721_+	type I restriction modification DNA specificity domain protein	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
AWR12539.1|559117_559249_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12540.1|559262_559673_+|transposase	putative transposase	transposase	NA	NA	NA	NA
AWR12541.1|560472_560682_+	putative iSSdy1 transposon protein	NA	A0A2H4PQV6	Staphylococcus_phage	91.2	4.7e-27
AWR12542.1|560703_561273_+|integrase	integrase core domain protein	integrase	A0A2I7SC85	Paenibacillus_phage	56.8	1.3e-55
AWR12543.1|561470_562043_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
AWR12544.1|562143_562485_-	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
AWR12545.1|562525_563152_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
AWR12546.1|563226_564222_-	hypothetical protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
AWR12547.1|564302_564917_-	excalibur calcium-binding domain protein	NA	A0A2H4PQM8	Staphylococcus_phage	93.1	1.1e-42
AWR12548.1|565229_565712_+	hypothetical protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.8e-80
AWR12549.1|565870_567349_+	O-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
AWR12550.1|567353_568355_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
AWR12551.1|568351_568609_-	putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AWR12552.1|568668_569148_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	99.4	3.0e-85
AWR12553.1|569128_569899_+	prolyl oligopeptidase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.5e-142
AWR12554.1|570276_571869_-	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AWR12555.1|572240_573437_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
AWR12556.1|573558_574467_+	nuclease-related domain protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
AWR12557.1|574678_575512_+	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
AWR12558.1|575574_576258_-|transposase	transposase DDE domain protein	transposase	A0ZS58	Staphylococcus_virus	96.5	1.2e-124
AWR12559.1|576696_576861_-|transposase	putative transposase	transposase	A0A146ICT8	Staphylococcus_phage	98.1	2.9e-24
AWR12560.1|577508_577862_-	crcB-like family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
AWR12561.1|577858_578224_-	crcB-like family protein	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AWR12562.1|578479_578782_-	putative membrane protein	NA	NA	NA	NA	NA
AWR12563.1|579041_579755_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AWR12564.1|580194_580830_-|protease	CAAX protease self-immunity family protein	protease	NA	NA	NA	NA
AWR12565.1|581125_581569_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AWR12566.1|581555_581699_-	hypothetical protein	NA	NA	NA	NA	NA
AWR12567.1|582111_582582_-	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
AWR12568.1|582780_583005_+	hypothetical protein	NA	NA	NA	NA	NA
582730:582746	attR	ATTACTTTGCTAAATAG	NA	NA	NA	NA
AWR12569.1|583280_584135_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AWR12570.1|584221_585514_-	arsenite/antimonite efflux pump membrane family protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AWR12571.1|586350_587853_+	FAD-NAD(P)-binding family protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
AWR12572.1|588333_589377_+	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
AWR12573.1|589383_590016_+	riboflavin synthase, alpha subunit	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
AWR12574.1|590026_591208_+	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
AWR12575.1|591220_591685_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
AWR12576.1|591806_592808_-	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
AWR12577.1|593040_593868_+	alpha/beta hydrolase fold family protein	NA	NA	NA	NA	NA
AWR12578.1|594439_594841_+	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AWR12579.1|594963_595527_-	methyltransferase domain protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AWR12580.1|595523_596477_-	radical SAM superfamily protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AWR12581.1|596586_597768_+	sugar (and other) transporter family protein	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
AWR12582.1|598058_600473_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
AWR12583.1|600494_600806_+	rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
AWR12584.1|601131_607692_+	sasC/Mrp/FmtB intercellular aggregation domain protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
AWR12585.1|607808_609077_-	flavo, HI0933 family protein	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
AWR12586.1|609483_611145_+	matE family protein	NA	NA	NA	NA	NA
AWR12587.1|611141_611837_+	pseudouridine synthase family protein	NA	NA	NA	NA	NA
AWR12588.1|611853_612276_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12589.1|612719_614129_+	dipeptidase family protein	NA	NA	NA	NA	NA
AWR12590.1|614132_614981_+	D-amino-acid transaminase	NA	NA	NA	NA	NA
AWR12591.1|615530_616322_+	phosphotransferase enzyme family protein	NA	NA	NA	NA	NA
AWR12592.1|616336_616981_+|tRNA	tRNA (guanine-N(7)-)-methyltransferase	tRNA	NA	NA	NA	NA
>prophage 3
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	737721	746764	2910130	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AWR12696.1|737721_738726_+	holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
AWR12697.1|738727_739753_+|tRNA	tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AWR12698.1|739775_740915_+|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AWR12699.1|740933_741194_+	preprotein translocase, YajC subunit	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AWR12700.1|741468_743748_+	protein-export membrane protein SecD	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AWR12701.1|743950_746224_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
AWR12702.1|746245_746764_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
>prophage 4
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	881722	969281	2910130	integrase,portal,protease,tRNA,head,terminase,capsid,tail,holin	Staphylococcus_phage(82.05%)	104	887301:887329	932977:933005
AWR12845.1|881722_882448_+	transcriptional regulatory protein SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
AWR12846.1|882485_884180_+	sensor protein SrrB	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
AWR12847.1|884237_884381_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12848.1|884483_885350_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12849.1|885342_887370_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	1.6e-116
887301:887329	attL	ACCATCACATTATGATGATATGTTTATTT	NA	NA	NA	NA
AWR12850.1|887412_888618_-|integrase	phage integrase family protein	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AWR12851.1|888743_889358_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
AWR12852.1|889354_889480_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	97.6	7.3e-12
AWR12853.1|889536_889719_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
AWR12854.1|889788_890520_-	helix-turn-helix domain protein	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
AWR12855.1|890671_890884_+	helix-turn-helix family protein	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
AWR12856.1|890931_891375_+	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
AWR12857.1|891389_891539_+	hypothetical protein	NA	D2JGJ0	Staphylococcus_phage	100.0	1.4e-20
AWR12858.1|891579_891792_-	putative uracil-DNA glycosylase	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
AWR12859.1|891861_892059_+	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
AWR12860.1|892706_893072_-	putative phage protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AWR12861.1|893126_893342_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
AWR12862.1|893366_893630_+	homeo-like domain protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
AWR12863.1|893882_894206_+	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
AWR12864.1|894220_894583_+	hypothetical protein	NA	A0A2I6PEM7	Staphylococcus_phage	99.2	1.9e-55
AWR12865.1|894579_895746_+	hypothetical protein	NA	R4WAL0	Staphylococcus_phage	98.7	1.5e-218
AWR12866.1|895771_896329_+	hypothetical protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
AWR12867.1|896388_898350_+	DNA polymerase A family protein	NA	A0A2K9VBT3	Staphylococcus_phage	99.7	0.0e+00
AWR12868.1|898362_898548_+	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AWR12869.1|898547_898949_+	PVL ORF-50-like family protein	NA	A0A2I6PEL5	Staphylococcus_phage	98.5	1.8e-67
AWR12870.1|898948_899203_+	hypothetical protein	NA	A7TWG9	Staphylococcus_phage	100.0	2.2e-42
AWR12871.1|899208_899451_+	phage family protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.1e-40
AWR12872.1|899464_899671_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
AWR12873.1|899673_900078_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	98.5	1.0e-70
AWR12874.1|900077_900422_+	yopX family protein	NA	D2JGL4	Staphylococcus_phage	100.0	1.7e-58
AWR12875.1|900418_900727_+	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	99.0	3.1e-51
AWR12876.1|900719_900974_+	hypothetical protein	NA	A7TWH5	Staphylococcus_phage	92.9	6.1e-37
AWR12877.1|900960_901131_+	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	100.0	5.7e-23
AWR12878.1|901123_901660_+	dUTPase family protein	NA	A0A1W6JPM9	Staphylococcus_phage	99.4	4.6e-95
AWR12879.1|901696_901903_+	hypothetical protein	NA	A7TWH8	Staphylococcus_phage	97.1	4.9e-29
AWR12880.1|901899_902103_+	hypothetical protein	NA	A7TWH9	Staphylococcus_phage	100.0	8.8e-31
AWR12881.1|902095_902332_+	hypothetical protein	NA	A7TWI0	Staphylococcus_phage	100.0	3.6e-36
AWR12882.1|902324_902711_+	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	1.0e-64
AWR12883.1|902707_902860_+	transcriptional activator RinB family protein	NA	A7TWI2	Staphylococcus_phage	98.0	1.3e-18
AWR12884.1|902927_903128_+	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AWR12885.1|903180_905628_+	virulence-associated E family protein	NA	M1RZC5	Staphylococcus_phage	99.5	0.0e+00
AWR12886.1|905968_906259_+	VRR-NUC domain protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
AWR12887.1|906248_907607_+	type III restriction enzyme, res subunit	NA	A0A2K9VBW3	Staphylococcus_phage	100.0	4.3e-262
AWR12888.1|907619_908057_+	phage transcriptional regulator, RinA family protein	NA	B7T0I6	Staphylococcus_virus	100.0	6.1e-77
AWR12889.1|908213_908534_+	HNH endonuclease family protein	NA	A0A2K9VBV6	Staphylococcus_phage	99.1	1.1e-56
AWR12890.1|908658_908964_+|terminase	phage terminase, small subunit	terminase	U5U414	Staphylococcus_phage	100.0	2.9e-49
AWR12891.1|908953_910645_+	phage Terminase family protein	NA	A0A2K9VBQ1	Staphylococcus_phage	100.0	0.0e+00
AWR12892.1|910649_911888_+|portal	phage portal protein, HK97 family	portal	A0A2K9VBP0	Staphylococcus_phage	99.5	2.0e-234
AWR12893.1|911871_912645_+|protease	clp protease family protein	protease	M1TAZ4	Staphylococcus_phage	100.0	9.2e-137
AWR12894.1|912656_913820_+|capsid	phage major capsid protein, HK97 family	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
AWR12895.1|913888_914167_+|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AWR12896.1|914178_914511_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	8.2e-58
AWR12897.1|914507_914909_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AWR12898.1|914909_915305_+	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AWR12899.1|915339_915981_+|tail	phage major tail, phi13 family protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AWR12900.1|916072_916528_+	bacterial Ig-like domain family protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
AWR12901.1|916585_916936_+	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
AWR12902.1|916977_917136_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AWR12903.1|917149_923350_+|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A2I6PE73	Staphylococcus_phage	99.3	0.0e+00
AWR12904.1|923349_924174_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AWR12905.1|924182_925766_+|tail	prophage endopeptidase tail family protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AWR12906.1|925765_926056_+	putative phage protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AWR12907.1|926071_927982_+	putative minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AWR12908.1|927981_929448_+	hypothetical protein	NA	A0A2I6PES7	Staphylococcus_phage	99.8	5.8e-273
AWR12909.1|929447_929837_+	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AWR12910.1|929829_929994_+	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AWR12911.1|930039_930339_+	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AWR12912.1|930475_930778_+|holin	holin, SPP1 family	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
AWR12913.1|930788_932243_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	U5U7D2	Staphylococcus_phage	100.0	2.6e-289
AWR12914.1|932965_933181_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
932977:933005	attR	ACCATCACATTATGATGATATGTTTATTT	NA	NA	NA	NA
AWR12915.1|933270_934176_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12916.1|934233_935130_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12917.1|935205_935460_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12918.1|935461_935584_-	putative membrane protein	NA	NA	NA	NA	NA
AWR12919.1|935600_936557_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12920.1|936958_937504_+	riboflavin transporter RibU	NA	NA	NA	NA	NA
AWR12921.1|937609_937858_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AWR12922.1|937965_938919_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12923.1|938908_940288_+	ATP-dependent DNA helicase, RecQ family protein	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
AWR12924.1|940440_941901_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
AWR12925.1|942302_943289_+	pyridine nucleotide-disulfide oxidoreductase family protein	NA	NA	NA	NA	NA
AWR12926.1|943403_944372_-	asparaginase family protein	NA	NA	NA	NA	NA
AWR12927.1|944448_945108_+	cytidylate kinase	NA	NA	NA	NA	NA
AWR12928.1|945819_946995_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AWR12929.1|947216_948527_+	GTP-binding protein Era	NA	NA	NA	NA	NA
AWR12930.1|948543_949542_+	NAD binding domain of 6-phosphogluconate dehydrogenase family protein	NA	NA	NA	NA	NA
AWR12931.1|949712_949985_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AWR12932.1|950415_950988_+	heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein	NA	NA	NA	NA	NA
AWR12933.1|950990_951716_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AWR12934.1|951717_952677_+	heptaprenyl diphosphate synthase component 2	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AWR12935.1|952768_953218_+	nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AWR12936.1|954012_955179_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
AWR12937.1|955204_956269_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AWR12938.1|956278_957577_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AWR12939.1|957583_958828_+	TPR repeat family protein	NA	NA	NA	NA	NA
AWR12940.1|958841_959417_+	hypothetical protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
AWR12941.1|959406_959994_+	hypothetical protein	NA	NA	NA	NA	NA
AWR12942.1|960047_960746_+	neutral zinc metallopeptidase family protein	NA	NA	NA	NA	NA
AWR12943.1|961081_961399_+	mazG nucleotide pyrophosphohydrolase domain protein	NA	NA	NA	NA	NA
AWR12944.1|961672_962785_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
AWR12945.1|962789_963992_+|head	poly A polymerase head domain protein	head	H7BUW3	unidentified_phage	43.3	4.2e-35
AWR12946.1|963978_964950_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AWR12947.1|964973_967667_+	hypothetical protein	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
AWR12948.1|967988_969281_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
>prophage 5
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	1320373	1402862	2910130	portal,tRNA,head,tail,capsid,terminase,transposase,holin	Staphylococcus_phage(82.61%)	103	NA	NA
AWR13241.1|1320373_1321693_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AWR13242.1|1322211_1322445_+	hypothetical protein	NA	NA	NA	NA	NA
AWR13243.1|1323066_1323252_+	putative membrane protein	NA	NA	NA	NA	NA
AWR13244.1|1323458_1323656_-	hypothetical protein	NA	NA	NA	NA	NA
AWR13245.1|1324017_1324368_-	complement inhibitor	NA	NA	NA	NA	NA
AWR13246.1|1324517_1325015_-	fibrinogen-binding protein	NA	NA	NA	NA	NA
AWR13247.1|1325274_1325781_-	putative membrane protein	NA	NA	NA	NA	NA
AWR13248.1|1326450_1326852_+	FPRL1 inhibitory protein	NA	NA	NA	NA	NA
AWR13249.1|1326942_1327059_-	putative membrane protein	NA	NA	NA	NA	NA
AWR13250.1|1327220_1327550_-	fibrinogen-binding protein	NA	NA	NA	NA	NA
AWR13251.1|1327743_1327884_-	hypothetical protein	NA	NA	NA	NA	NA
AWR13252.1|1328038_1328542_-	phosphodiesterase, MJ0936 family protein	NA	NA	NA	NA	NA
AWR13253.1|1328534_1329122_-	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA	NA
AWR13254.1|1329133_1329934_-	glutamate racemase	NA	NA	NA	NA	NA
AWR13255.1|1330169_1330985_-	succinate dehydrogenase and fumarate reductase iron-sulfur family protein	NA	NA	NA	NA	NA
AWR13256.1|1330984_1332751_-	succinate dehydrogenase/fumarate reductase, flavoprotein subunit	NA	NA	NA	NA	NA
AWR13257.1|1332802_1333417_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
AWR13258.1|1333740_1335522_-	excinuclease ABC subunit C	NA	NA	NA	NA	NA
AWR13259.1|1335845_1336160_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
AWR13260.1|1336332_1338681_-	mutS2 protein	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.1	3.2e-15
AWR13261.1|1338690_1340403_-	PHP domain protein	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
AWR13262.1|1340475_1340997_-	colicin V production family protein	NA	NA	NA	NA	NA
AWR13263.1|1340997_1341264_-	cell division ZapA family protein	NA	NA	NA	NA	NA
AWR13264.1|1341633_1342572_+	ribonuclease HIII	NA	NA	NA	NA	NA
AWR13265.1|1343003_1345406_-|tRNA	phenylalanine--tRNA ligase, beta subunit	tRNA	NA	NA	NA	NA
AWR13266.1|1345405_1346464_-|tRNA	phenylalanine--tRNA ligase, alpha subunit	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
AWR13267.1|1346843_1347584_-	RNA 2'-O ribose methyltransferase substrate binding family protein	NA	NA	NA	NA	NA
AWR13268.1|1347967_1348291_-	antibiotic biosynthesis monooxygenase family protein	NA	NA	NA	NA	NA
AWR13269.1|1348309_1349044_-	sortase, SrtB family	NA	NA	NA	NA	NA
AWR13270.1|1349105_1350074_-	fecCD transport family protein	NA	NA	NA	NA	NA
AWR13271.1|1350083_1350830_-	heme ABC transporter, heme-binding protein isdE	NA	NA	NA	NA	NA
AWR13272.1|1350958_1352035_-	putative iron-regulated protein	NA	NA	NA	NA	NA
AWR13273.1|1352034_1352718_-	heme uptake protein IsdC	NA	NA	NA	NA	NA
AWR13274.1|1352926_1353979_+	iron-regulated surface determinant protein A	NA	NA	NA	NA	NA
AWR13275.1|1354181_1356119_+	heme uptake protein IsdB	NA	NA	NA	NA	NA
AWR13276.1|1356529_1356715_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
AWR13277.1|1356897_1357026_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	1.1e-15
AWR13278.1|1357424_1357982_+	putative penicillin binding protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
AWR13279.1|1358041_1359454_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
AWR13280.1|1359440_1359716_-|holin	holin, SPP1 family	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
AWR13281.1|1359771_1360167_-	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
AWR13282.1|1360172_1361411_-	hypothetical protein	NA	A0A0F6N3G7	Staphylococcus_phage	100.0	1.6e-210
AWR13283.1|1361423_1363316_-	CHAP domain protein	NA	B7T0E8	Staphylococcus_virus	95.3	0.0e+00
AWR13284.1|1363442_1363850_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	94.3	3.5e-26
AWR13285.1|1363895_1364051_-	hypothetical protein	NA	M9QX31	Staphylococcus_phage	90.2	9.1e-20
AWR13286.1|1364043_1364430_-	hypothetical protein	NA	W5R9M2	Staphylococcus_phage	86.5	4.1e-45
AWR13287.1|1364429_1366253_-	hypothetical protein	NA	S4V7L3	Staphylococcus_phage	100.0	0.0e+00
AWR13288.1|1366252_1368163_-	putative minor structural protein	NA	S4V9M9	Staphylococcus_phage	99.8	0.0e+00
AWR13289.1|1368177_1370079_-|tail	prophage endopeptidase tail family protein	tail	B7T0E2	Staphylococcus_virus	98.1	0.0e+00
AWR13290.1|1370087_1371035_-|tail	phage tail family protein	tail	Q8SDT6	Staphylococcus_phage	99.7	6.1e-183
AWR13291.1|1371047_1374512_-	putative membrane protein	NA	Q4ZDL9	Staphylococcus_virus	100.0	2.3e-267
AWR13292.1|1374528_1374873_-	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
AWR13293.1|1374902_1375268_-	phage family protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
AWR13294.1|1375329_1375911_-|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
AWR13295.1|1375929_1376313_-	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	3.8e-67
AWR13296.1|1376324_1376672_-	hypothetical protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
AWR13297.1|1376970_1377303_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
AWR13298.1|1377311_1377599_-	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
AWR13299.1|1377620_1378595_-|capsid	phage major capsid protein, HK97 family	capsid	E0Y3L0	Staphylococcus_virus	100.0	2.2e-183
AWR13300.1|1378608_1379229_-	hypothetical protein	NA	S4V984	Staphylococcus_phage	98.5	1.7e-69
AWR13301.1|1379337_1379508_-	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
AWR13302.1|1379580_1380576_-|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
AWR13303.1|1380582_1382121_-|portal	phage portal protein, SPP1 family	portal	S4V6D8	Staphylococcus_phage	99.8	4.5e-292
AWR13304.1|1382131_1383409_-|terminase	phage terminase, large subunit, PBSX family	terminase	S4V685	Staphylococcus_phage	100.0	1.3e-249
AWR13305.1|1383395_1383554_-|terminase	putative small terminase	terminase	I1W650	Staphylococcus_phage	98.1	1.7e-21
AWR13306.1|1383606_1383837_-|terminase	terminase small subunit	terminase	Q8SDV0	Staphylococcus_phage	100.0	3.1e-32
AWR13307.1|1384023_1384446_-	phage transcriptional regulator, RinA family protein	NA	S4V7K2	Staphylococcus_phage	100.0	1.6e-74
AWR13308.1|1384469_1384616_-	hypothetical protein	NA	S4V9L4	Staphylococcus_phage	100.0	1.7e-15
AWR13309.1|1384616_1384790_-	transcriptional activator RinB family protein	NA	Q4ZBK0	Staphylococcus_phage	98.2	1.4e-21
AWR13310.1|1384786_1385173_-	hypothetical protein	NA	A0A0N9BB01	Staphylococcus_phage	96.9	3.7e-62
AWR13311.1|1385169_1385376_-	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
AWR13312.1|1385372_1385618_-	putative membrane protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
AWR13313.1|1385654_1386161_-	dUTPase family protein	NA	M9NS45	Staphylococcus_phage	100.0	5.9e-92
AWR13314.1|1386175_1386337_-	hypothetical protein	NA	W5R9K6	Staphylococcus_phage	100.0	1.4e-23
AWR13315.1|1386337_1386595_-	hypothetical protein	NA	A0A2I6PDX3	Staphylococcus_phage	94.1	1.2e-40
AWR13316.1|1386783_1387035_-	hypothetical protein	NA	E0Y3Q8	Staphylococcus_virus	94.0	7.1e-38
AWR13317.1|1387049_1387292_-	phage family protein	NA	A0A2H4PQJ3	Staphylococcus_phage	98.8	1.2e-39
AWR13318.1|1387294_1387552_-	hypothetical protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
AWR13319.1|1387551_1387923_-	PVL ORF-50-like family protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
AWR13320.1|1387935_1388340_-	endodeoxyribonuclease RusA family protein	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
AWR13321.1|1388348_1388567_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
AWR13322.1|1388573_1389140_-	dnaD domain protein	NA	S4V6D4	Staphylococcus_phage	93.1	3.1e-73
AWR13323.1|1389487_1389958_-	single-stranded DNA-binding family protein	NA	A0A0E3T9H6	Staphylococcus_phage	98.7	6.3e-80
AWR13324.1|1389958_1390444_-	beta-lactamase superfamily domain protein	NA	A0A1W6JPL3	Staphylococcus_phage	99.4	3.6e-86
AWR13325.1|1390656_1391577_-	recombinase, phage RecT family protein	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
AWR13326.1|1391578_1393522_-	hypothetical protein	NA	I1W619	Staphylococcus_phage	98.6	0.0e+00
AWR13327.1|1393802_1394063_-	hypothetical protein	NA	A0A059T5A3	Staphylococcus_phage	100.0	1.2e-43
AWR13328.1|1394156_1394477_-	hypothetical protein	NA	S4V968	Staphylococcus_phage	100.0	4.8e-55
AWR13329.1|1394477_1394645_-	hypothetical protein	NA	S4V7J2	Staphylococcus_phage	100.0	9.5e-23
AWR13330.1|1394637_1394775_-	hypothetical protein	NA	S4SX85	Staphylococcus_phage	100.0	3.2e-16
AWR13331.1|1394824_1395055_+	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
AWR13332.1|1395029_1395206_-	hypothetical protein	NA	S4SVC9	Staphylococcus_phage	100.0	9.7e-26
AWR13333.1|1395258_1395453_-	hypothetical protein	NA	E9LT75	Staphylococcus_phage	100.0	1.2e-29
AWR13334.1|1395469_1396258_-	phage antirepressor KilAC domain protein	NA	A0EWP1	Staphylococcus_virus	99.6	9.4e-145
AWR13335.1|1396414_1396723_-	hypothetical protein	NA	S4V9P0	Staphylococcus_phage	100.0	1.3e-49
AWR13336.1|1396737_1396956_-	helix-turn-helix family protein	NA	Q8SDX1	Staphylococcus_phage	100.0	2.9e-35
AWR13337.1|1397097_1397817_+	helix-turn-helix family protein	NA	Q8SDX2	Staphylococcus_phage	100.0	9.8e-133
AWR13338.1|1397852_1398533_+	pemK-like family protein	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
AWR13339.1|1398739_1400125_+	resolvase, N terminal domain protein	NA	I1W625	Staphylococcus_phage	99.8	5.5e-265
AWR13340.1|1400241_1400415_-	ribosomal protein L32	NA	NA	NA	NA	NA
AWR13341.1|1400494_1401052_-	hypothetical protein	NA	NA	NA	NA	NA
AWR13342.1|1401178_1402318_+	HIGH Nucleotidyl Transferase family protein	NA	NA	NA	NA	NA
AWR13343.1|1402379_1402862_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
>prophage 6
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	1454602	1463012	2910130		Synechococcus_phage(33.33%)	9	NA	NA
AWR13394.1|1454602_1455169_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
AWR13395.1|1455171_1456200_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
AWR13396.1|1456192_1457677_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
AWR13397.1|1457655_1459845_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
AWR13398.1|1459837_1460509_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AWR13399.1|1460510_1460774_-	phosphoribosylformylglycinamidine synthase, purS protein	NA	NA	NA	NA	NA
AWR13400.1|1460773_1461478_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
AWR13401.1|1461481_1462606_-	N5-carboxyaminoimidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AWR13402.1|1462592_1463012_-	phosphoribosylaminoimidazole carboxylase, catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	1.6e-18
>prophage 7
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	1609644	1666571	2910130	integrase,portal,head,tail,capsid,terminase,transposase,holin	Staphylococcus_phage(76.47%)	79	1633816:1633832	1668468:1668484
AWR13539.1|1609644_1610964_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
AWR13540.1|1611169_1611553_-	hypothetical protein	NA	NA	NA	NA	NA
AWR13541.1|1611682_1612600_-	lipoyl synthase	NA	NA	NA	NA	NA
AWR13542.1|1612683_1614003_-	5'-nucleotidase, C-terminal domain protein	NA	NA	NA	NA	NA
AWR13543.1|1614029_1614857_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AWR13544.1|1614869_1615718_-	hypothetical protein	NA	NA	NA	NA	NA
AWR13545.1|1616102_1617170_-	nitronate monooxygenase family protein	NA	NA	NA	NA	NA
AWR13546.1|1617183_1618224_-	hypothetical protein	NA	NA	NA	NA	NA
AWR13547.1|1618588_1618903_+	putative membrane protein	NA	NA	NA	NA	NA
AWR13548.1|1619732_1619918_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
AWR13549.1|1620100_1620229_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	1.1e-15
AWR13550.1|1620627_1621185_+	putative penicillin binding protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
AWR13551.1|1621244_1622657_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
AWR13552.1|1622643_1622919_-|holin	holin, SPP1 family	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
AWR13553.1|1622974_1623370_-	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
AWR13554.1|1623375_1624614_-	hypothetical protein	NA	A0A0F6N3G7	Staphylococcus_phage	98.8	2.5e-208
AWR13555.1|1624626_1626525_-	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q8SDT1	Staphylococcus_phage	99.4	0.0e+00
AWR13556.1|1626661_1626961_-	hypothetical protein	NA	A0A0H4ITZ0	Staphylococcus_phage	100.0	7.6e-47
AWR13557.1|1627001_1627184_-	hypothetical protein	NA	A0A2H4PQV2	Staphylococcus_phage	100.0	1.9e-29
AWR13558.1|1627184_1627562_-	hypothetical protein	NA	Q9FZY7	Staphylococcus_virus	100.0	1.2e-60
AWR13559.1|1627561_1629385_-	hypothetical protein	NA	M9NUJ5	Staphylococcus_phage	92.9	1.1e-276
AWR13560.1|1629384_1631295_-	putative minor structural protein	NA	Q4ZDU1	Staphylococcus_virus	98.7	0.0e+00
AWR13561.1|1631309_1633211_-|tail	prophage endopeptidase tail family protein	tail	I1W634	Staphylococcus_phage	99.8	0.0e+00
AWR13562.1|1633219_1634167_-|tail	phage tail family protein	tail	Q8SDT6	Staphylococcus_phage	99.7	6.1e-183
1633816:1633832	attL	TGTTTTTATCTAATTTC	NA	NA	NA	NA
AWR13563.1|1634179_1637644_-	putative membrane protein	NA	Q4ZDL9	Staphylococcus_virus	100.0	2.3e-267
AWR13564.1|1637660_1638005_-	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
AWR13565.1|1638034_1638400_-	phage family protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
AWR13566.1|1638461_1639043_-|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
AWR13567.1|1639061_1639445_-	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	3.8e-67
AWR13568.1|1639456_1639804_-	hypothetical protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
AWR13569.1|1640102_1640435_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
AWR13570.1|1640443_1640731_-	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
AWR13571.1|1640752_1641727_-|capsid	phage major capsid protein, HK97 family	capsid	E0Y3L0	Staphylococcus_virus	100.0	2.2e-183
AWR13572.1|1641747_1642362_-	hypothetical protein	NA	S4V984	Staphylococcus_phage	98.0	6.1e-67
AWR13573.1|1642470_1642641_-	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
AWR13574.1|1642713_1643709_-|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
AWR13575.1|1643715_1645254_-|portal	phage portal protein, SPP1 family	portal	A0A0F6N4I8	Staphylococcus_phage	100.0	2.4e-293
AWR13576.1|1645264_1646560_-|terminase	phage terminase, large subunit, PBSX family	terminase	A0A0F6N3L3	Staphylococcus_phage	100.0	3.0e-257
AWR13577.1|1646562_1647057_-|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	100.0	7.8e-89
AWR13578.1|1647244_1647667_-	phage transcriptional regulator, RinA family protein	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
AWR13579.1|1647837_1648011_-	transcriptional activator RinB family protein	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
AWR13580.1|1648003_1648240_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
AWR13581.1|1648232_1648436_-	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
AWR13582.1|1648432_1648627_-	hypothetical protein	NA	A0A2I6PEC2	Staphylococcus_phage	100.0	6.0e-29
AWR13583.1|1648623_1648830_-	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	72.1	1.0e-18
AWR13584.1|1648866_1649400_-	dUTP diphosphatase family protein	NA	A1KX16	Staphylococcus_virus	99.4	2.4e-96
AWR13585.1|1649392_1649563_-	hypothetical protein	NA	A7TWH6	Staphylococcus_phage	91.1	1.5e-20
AWR13586.1|1649549_1649804_-	hypothetical protein	NA	A1KX15	Staphylococcus_virus	97.6	2.5e-38
AWR13587.1|1649796_1650162_-	acetyltransferase family protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.5e-54
AWR13588.1|1650176_1650419_-	phage family protein	NA	A0A0F6N3E1	Staphylococcus_phage	98.8	1.9e-40
AWR13589.1|1650422_1650779_-	PVL ORF-50-like family protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
AWR13590.1|1650906_1651212_-	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
AWR13591.1|1651212_1651398_-	hypothetical protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
AWR13592.1|1651402_1651807_-	hypothetical protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
AWR13593.1|1651816_1652038_-	hypothetical protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
AWR13594.1|1652050_1652209_-	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
AWR13595.1|1652202_1652982_-	AFG1-like ATPase family protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
AWR13596.1|1652991_1653762_-	conserved phage family protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
AWR13597.1|1653827_1654109_+	pTS system, fructose subfamily, IIA component domain protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
AWR13598.1|1654247_1654922_-	hypothetical protein	NA	R4IH15	Staphylococcus_phage	96.9	1.4e-125
AWR13599.1|1654935_1655364_-	single-stranded DNA-binding protein ssb	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
AWR13600.1|1655363_1655987_-	hypothetical protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
AWR13601.1|1655979_1656201_-	hypothetical protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
AWR13602.1|1656210_1656471_-	hypothetical protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
AWR13603.1|1656475_1656778_-	hypothetical protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
AWR13604.1|1657025_1657247_-	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
AWR13605.1|1657260_1657710_-	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	100.0	3.0e-79
AWR13606.1|1657749_1657974_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
AWR13607.1|1657974_1658742_-	phage antirepressor KilAC domain protein	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
AWR13608.1|1658741_1658936_-	helix-turn-helix family protein	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
AWR13609.1|1659198_1659531_+	helix-turn-helix family protein	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
AWR13610.1|1659547_1660222_+	hypothetical protein	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
AWR13611.1|1660249_1660975_+	short C-terminal domain protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
AWR13612.1|1661006_1661939_+	putative phage protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
AWR13613.1|1661918_1662098_-	putative excisionase	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
AWR13614.1|1662210_1663260_+|integrase	phage integrase family protein	integrase	A1KWY3	Staphylococcus_virus	99.7	4.5e-203
AWR13615.1|1663327_1664725_-	feS assembly protein SufB	NA	NA	NA	NA	NA
AWR13616.1|1664875_1665340_-	SUF system FeS assembly protein, NifU family	NA	NA	NA	NA	NA
AWR13617.1|1665329_1666571_-	putative cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	8.2e-111
1668468:1668484	attR	TGTTTTTATCTAATTTC	NA	NA	NA	NA
>prophage 8
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	1752058	1766699	2910130		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AWR13702.1|1752058_1752820_-	ABC transporter family protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
AWR13703.1|1752816_1753773_-	fecCD transport family protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AWR13704.1|1753759_1754731_-	fecCD transport family protein	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AWR13705.1|1755105_1756077_-	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AWR13706.1|1756194_1758300_-	ribonucleoside-diphosphate reductase, alpha subunit	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AWR13707.1|1758262_1758661_-	nrdI protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AWR13708.1|1759461_1760328_+	eamA-like transporter family protein	NA	NA	NA	NA	NA
AWR13709.1|1760347_1760848_+	7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AWR13710.1|1761188_1762694_+	H+ symporter family protein	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AWR13711.1|1762963_1763881_+	putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
AWR13712.1|1764759_1765302_-	putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AWR13713.1|1765640_1766699_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
>prophage 9
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	1778670	1786491	2910130		Pandoravirus(16.67%)	10	NA	NA
AWR13722.1|1778670_1779822_-	chorismate binding enzyme family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
AWR13723.1|1779805_1780399_-	glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AWR13724.1|1780749_1781418_+	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AWR13725.1|1781419_1781839_+	queuosine biosynthesis protein QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AWR13726.1|1781842_1782556_+	7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AWR13727.1|1782654_1783239_+	putative membrane protein	NA	NA	NA	NA	NA
AWR13728.1|1783518_1783959_+	electron transfer DM13 family protein	NA	NA	NA	NA	NA
AWR13729.1|1784301_1784775_+	doxX family protein	NA	NA	NA	NA	NA
AWR13730.1|1784749_1785436_+	response regulator	NA	NA	NA	NA	NA
AWR13731.1|1785435_1786491_+	histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
>prophage 10
CP029680	Staphylococcus aureus strain AR_0215 chromosome, complete genome	2910130	2449670	2509054	2910130	tRNA,transposase,integrase	Staphylococcus_phage(46.15%)	57	2503709:2503768	2509055:2509115
AWR14320.1|2449670_2450657_+|tRNA	putative tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
AWR14321.1|2451323_2452517_-	quinone oxidoreductase	NA	NA	NA	NA	NA
AWR14322.1|2452535_2453870_-	rhodanese-like domain protein	NA	NA	NA	NA	NA
AWR14323.1|2453900_2454965_-	dsrE/DsrF/DrsH-like family protein	NA	A0A2H4PQR9	Staphylococcus_phage	41.8	7.7e-09
AWR14324.1|2455101_2455362_+	metal-sensitive transcriptional repressor family protein	NA	NA	NA	NA	NA
AWR14325.1|2455361_2456117_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AWR14326.1|2456550_2456877_+|tRNA	putative tRNA-dihydrouridine synthase domain protein	tRNA	NA	NA	NA	NA
AWR14327.1|2457060_2458806_-	sporadically distributed, TIGR04141 family protein	NA	NA	NA	NA	NA
AWR14328.1|2459392_2460901_-	kinase domain protein	NA	NA	NA	NA	NA
AWR14329.1|2461015_2461642_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14330.1|2462186_2462561_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14331.1|2462760_2463657_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14332.1|2463666_2464536_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14333.1|2465080_2465638_-	K+-transporting ATPase, C subunit	NA	NA	NA	NA	NA
AWR14334.1|2465653_2467675_-	K+-transporting ATPase, B subunit	NA	E4ZFI9	Streptococcus_phage	29.0	6.6e-41
AWR14335.1|2467693_2469370_-	K+-transporting ATPase, A subunit	NA	NA	NA	NA	NA
AWR14336.1|2469637_2472307_+	his Kinase A domain protein	NA	A0A2K9L0Z8	Tupanvirus	21.5	6.0e-10
AWR14337.1|2472281_2472977_+	transcriptional regulatory, C terminal family protein	NA	NA	NA	NA	NA
AWR14338.1|2473907_2474069_-	hypothetical protein	NA	NA	NA	NA	NA
AWR14339.1|2474067_2474625_+	C4-dicarboxylate anaerobic carrier family protein	NA	NA	NA	NA	NA
AWR14340.1|2474831_2474966_-	hypothetical protein	NA	NA	NA	NA	NA
AWR14341.1|2475135_2475450_+	helix-turn-helix domain protein	NA	A0A0N7GFG6	Staphylococcus_phage	96.2	7.7e-50
AWR14342.1|2475434_2475788_+	HTH-like domain protein	NA	A0A0N9S8A3	Staphylococcus_phage	91.7	4.2e-44
AWR14343.1|2475899_2476277_+|integrase	integrase core domain protein	integrase	A0A0N9SIX5	Staphylococcus_phage	95.2	1.4e-61
AWR14344.1|2476527_2477574_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14345.1|2477766_2478063_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14346.1|2478062_2479856_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14347.1|2480089_2481439_+	resolvase, N terminal domain protein	NA	Q9T200	Bacillus_phage	25.1	1.4e-18
AWR14348.1|2481460_2483089_+	ogr/Delta-like zinc finger family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	2.4e-46
AWR14349.1|2483606_2483957_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14350.1|2484043_2484355_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14351.1|2484372_2484879_+	hypothetical protein	NA	NA	NA	NA	NA
AWR14352.1|2484899_2485217_+	radC-like JAB domain protein	NA	NA	NA	NA	NA
AWR14353.1|2485335_2486421_+|integrase	phage integrase, N-terminal SAM-like domain protein	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
AWR14354.1|2486417_2488310_+|integrase	phage integrase, N-terminal SAM-like domain protein	integrase	NA	NA	NA	NA
AWR14355.1|2488316_2488694_+|transposase	transposase C family protein	transposase	NA	NA	NA	NA
AWR14356.1|2488844_2489627_+	streptomycin 3''-adenylyltransferase	NA	NA	NA	NA	NA
AWR14357.1|2489752_2490484_-	rRNA adenine N-6-methyltransferase	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
AWR14358.1|2491017_2491680_+	methyltransferase domain protein	NA	NA	NA	NA	NA
AWR14359.1|2492018_2492399_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AWR14360.1|2492662_2492923_-	metal-sensitive transcriptional repressor family protein	NA	NA	NA	NA	NA
AWR14361.1|2493058_2494123_+	dsrE/DsrF/DrsH-like family protein	NA	NA	NA	NA	NA
AWR14362.1|2494155_2495094_+	metallo-beta-lactamase superfamily protein	NA	NA	NA	NA	NA
AWR14363.1|2495229_2495490_+	rhodanese-like domain protein	NA	NA	NA	NA	NA
AWR14364.1|2495603_2496713_-	ROK family protein	NA	NA	NA	NA	NA
AWR14365.1|2497220_2497592_-	methicillin resistance regulatory protein MecI	NA	NA	NA	NA	NA
AWR14366.1|2497591_2499247_-	methicillin resistance mecR1 protein	NA	NA	NA	NA	NA
AWR14367.1|2499448_2501455_+	penicillin-binding protein 2'	NA	NA	NA	NA	NA
AWR14368.1|2501500_2501929_-	maoC like domain protein	NA	NA	NA	NA	NA
AWR14369.1|2502025_2502769_-	glycerophosphoryl diester phosphodiesterase family protein	NA	NA	NA	NA	NA
AWR14370.1|2503033_2503708_+|transposase	transposase IS66 family protein	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
2503709:2503768	attL	GCGAACACTGACATGATAAATTAGTGGTTAGCTATATTTTTTTACTTTGCAACAGAACCG	NA	NA	NA	NA
AWR14371.1|2503945_2504671_+	kanamycin nucleotidyltransferase	NA	NA	NA	NA	NA
AWR14372.1|2504893_2505292_+	glyoxalase-like domain protein	NA	NA	NA	NA	NA
AWR14373.1|2505798_2507061_+	plasmid recombination enzyme family protein	NA	NA	NA	NA	NA
AWR14374.1|2507581_2508079_+	replication family protein	NA	NA	NA	NA	NA
AWR14375.1|2508136_2508289_+	replication family protein	NA	A0A286QS97	Streptococcus_phage	59.2	1.3e-07
AWR14376.1|2508379_2509054_+|integrase	integrase core domain protein	integrase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
2509055:2509115	attR	GCGAACACTGACATGATAAATTAGTGGTTAGCTATATTTTTTTACTTTGCAACAGAACCGA	NA	NA	NA	NA
