assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	2	733538-733678	1	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Orphan	GCCGCGTATCCGCTCCTGGTAGGTGCCGAGCTTGCTCGGCACGCTCT	47	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA|144aa|up_9|CP029773.1_722762_723194_-,NA|309aa|up_0|CP029773.1_732562_733489_+,NA|164aa|down_0|CP029773.1_733727_734219_-	NA|144aa|up_9|CP029773.1_722762_723194_-	NA	NA|306aa|up_8|CP029773.1_723275_724193_-	cd08475, PBP2_CrgA_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|394aa|up_7|CP029773.1_724286_725468_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|322aa|up_6|CP029773.1_725549_726515_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|433aa|up_5|CP029773.1_726540_727839_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|324aa|up_4|CP029773.1_728032_729004_+	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR)	NA|65aa|up_3|CP029773.1_729293_729488_+	pfam10636, hemP, Hemin uptake protein hemP	NA|736aa|up_2|CP029773.1_729677_731885_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|200aa|up_1|CP029773.1_731889_732489_+	COG3720, HemS, Putative heme degradation protein [Inorganic ion transport and metabolism]	NA|309aa|up_0|CP029773.1_732562_733489_+	NA	NA|164aa|down_0|CP029773.1_733727_734219_-	NA	NA|839aa|down_1|CP029773.1_734322_736839_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|216aa|down_2|CP029773.1_736835_737483_-	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|215aa|down_3|CP029773.1_737558_738203_+	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases	NA|249aa|down_4|CP029773.1_738257_739004_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|424aa|down_5|CP029773.1_739160_740432_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|down_6|CP029773.1_740727_741429_-	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|132aa|down_7|CP029773.1_741642_742038_+	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase	NA|250aa|down_8|CP029773.1_742070_742820_+	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|387aa|down_9|CP029773.1_743040_744201_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	3	789641-789763	2	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Orphan	TGCACTGGCAGGTGCGGACCTTGGTCCGCACGTCTCTGCCGGCC	44	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA,NA|140aa|down_0|CP029773.1_789790_790210_-	NA|185aa|up_9|CP029773.1_780334_780889_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|312aa|up_8|CP029773.1_780885_781821_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|194aa|up_7|CP029773.1_781817_782399_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|774aa|up_6|CP029773.1_782730_785052_+	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|360aa|up_5|CP029773.1_785104_786184_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|154aa|up_4|CP029773.1_786303_786765_-	pfam11304, DUF3106, Protein of unknown function (DUF3106)	NA|109aa|up_3|CP029773.1_786768_787095_-	pfam11859, DUF3379, Protein of unknown function (DUF3379)	NA|195aa|up_2|CP029773.1_787091_787676_-	PRK09047, PRK09047, RNA polymerase factor sigma-70; Validated	NA|107aa|up_1|CP029773.1_787773_788094_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|487aa|up_0|CP029773.1_788090_789551_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|140aa|down_0|CP029773.1_789790_790210_-	NA	NA|184aa|down_1|CP029773.1_790332_790884_+	TIGR03406, FeS_long_SufT, probable FeS assembly SUF system protein SufT	NA|365aa|down_2|CP029773.1_790943_792038_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|581aa|down_3|CP029773.1_792495_794238_+	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13	NA|162aa|down_4|CP029773.1_794358_794844_-	COG0252, AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|112aa|down_5|CP029773.1_794923_795259_-	pfam09842, DUF2069, Predicted membrane protein (DUF2069)	NA|198aa|down_6|CP029773.1_795255_795849_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|425aa|down_7|CP029773.1_795926_797201_+	PRK04214, rbn, ribonuclease BN/unknown domain fusion protein; Reviewed	NA|191aa|down_8|CP029773.1_797197_797770_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|261aa|down_9|CP029773.1_798409_799192_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	4	1311310-1311400	3	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Orphan	TGCCGGCCAGCGGCCGGCACTACCGA	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA,NA	NA|123aa|up_9|CP029773.1_1302905_1303274_+	PRK11280, PRK11280, hypothetical protein; Provisional	NA|376aa|up_8|CP029773.1_1303394_1304522_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|396aa|up_7|CP029773.1_1304518_1305706_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|338aa|up_6|CP029773.1_1305690_1306704_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|467aa|up_5|CP029773.1_1306696_1308097_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|298aa|up_4|CP029773.1_1308175_1309069_-	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|205aa|up_3|CP029773.1_1309175_1309790_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|263aa|up_2|CP029773.1_1309786_1310575_-	cd01086, MetAP1, Methionine Aminopeptidase 1	NA|71aa|up_1|CP029773.1_1310579_1310792_-	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system	NA|120aa|up_0|CP029773.1_1310860_1311220_-	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	NA|295aa|down_0|CP029773.1_1311437_1312322_-	pfam00491, Arginase, Arginase family	NA|355aa|down_1|CP029773.1_1312325_1313390_-	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|467aa|down_2|CP029773.1_1313419_1314820_-	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]	NA|239aa|down_3|CP029773.1_1314882_1315599_-	cd07524, HAD_Pase, phosphatase, similar to Bacillus subtilis MtnX; belongs to the haloacid dehalogenase-like superfamily	NA|403aa|down_4|CP029773.1_1315766_1316975_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|133aa|down_5|CP029773.1_1316985_1317384_-	pfam00892, EamA, EamA-like transporter family	NA|120aa|down_6|CP029773.1_1317380_1317740_-	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional	NA|279aa|down_7|CP029773.1_1317741_1318578_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|460aa|down_8|CP029773.1_1318657_1320037_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|228aa|down_9|CP029773.1_1320033_1320717_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	5	2263905-2264009	4	CRISPRCasFinder	no	csa3	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Type I-A	TGGTGGGTGTCAACCTTGGTTGACACGCT	29	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA|128aa|up_8|CP029773.1_2252893_2253277_-,NA|91aa|up_7|CP029773.1_2253405_2253678_-,NA|202aa|down_9|CP029773.1_2273828_2274434_+	NA|762aa|up_9|CP029773.1_2250532_2252818_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|128aa|up_8|CP029773.1_2252893_2253277_-	NA	NA|91aa|up_7|CP029773.1_2253405_2253678_-	NA	NA|73aa|up_6|CP029773.1_2253849_2254068_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|247aa|up_5|CP029773.1_2254154_2254895_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|375aa|up_4|CP029773.1_2256360_2257485_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|324aa|up_3|CP029773.1_2257586_2258558_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|787aa|up_2|CP029773.1_2258791_2261152_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|648aa|up_1|CP029773.1_2261191_2263135_+	pfam12969, DUF3857, Domain of Unknown Function with PDB structure (DUF3857)	NA|213aa|up_0|CP029773.1_2263246_2263885_+	PRK00031, lolA, outer membrane lipoprotein chaperone LolA	NA|454aa|down_0|CP029773.1_2264028_2265390_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|305aa|down_1|CP029773.1_2265690_2266605_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|130aa|down_2|CP029773.1_2266715_2267105_+	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|328aa|down_3|CP029773.1_2267230_2268214_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|343aa|down_4|CP029773.1_2268279_2269308_+	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|459aa|down_5|CP029773.1_2269430_2270807_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|349aa|down_6|CP029773.1_2270858_2271905_+	COG4558, ChuT, ABC-type hemin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|348aa|down_7|CP029773.1_2271901_2272945_+	pfam01032, FecCD, FecCD transport family	NA|254aa|down_8|CP029773.1_2272941_2273703_+	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional	NA|202aa|down_9|CP029773.1_2273828_2274434_+	NA
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	6	2706212-2706318	5	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Orphan	CCTGAACCGGTAGAGCCGGCCGCTGGCCGGC	31	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA,NA	NA|105aa|up_9|CP029773.1_2696006_2696321_+	COG4541, COG4541, Predicted membrane protein [Function unknown]	NA|143aa|up_8|CP029773.1_2696550_2696979_+	TIGR02938, Nitrogen_fixation_regulatory_protein, nitrogen fixation negative regulator NifL	NA|510aa|up_7|CP029773.1_2696975_2698505_+	COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	NA|269aa|up_6|CP029773.1_2698855_2699662_-	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional	NA|661aa|up_5|CP029773.1_2699844_2701827_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|206aa|up_4|CP029773.1_2701754_2702372_+	pfam10649, DUF2478, Protein of unknown function (DUF2478)	NA|346aa|up_3|CP029773.1_2702368_2703406_+	cd01147, HemV-2, Metal binding protein HemV-2	NA|338aa|up_2|CP029773.1_2703408_2704422_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|259aa|up_1|CP029773.1_2704418_2705195_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|267aa|up_0|CP029773.1_2705191_2705992_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|223aa|down_0|CP029773.1_2706400_2707069_-	cd03297, ABC_ModC_molybdenum_transporter, ATP-binding cassette domain of the molybdenum transport system	NA|228aa|down_1|CP029773.1_2707058_2707742_-	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|248aa|down_2|CP029773.1_2707745_2708489_-	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold	NA|259aa|down_3|CP029773.1_2708508_2709285_-	PRK11161, PRK11161, fumarate/nitrate reduction transcriptional regulator Fnr	NA|405aa|down_4|CP029773.1_2709296_2710511_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|444aa|down_5|CP029773.1_2710755_2712087_-	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|300aa|down_6|CP029773.1_2712110_2713010_-	TIGR02933, Putative_peptidyl-prolyl_cis-trans_isomerase_NifM, nitrogen fixation protein NifM	NA|236aa|down_7|CP029773.1_2713013_2713721_-	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|227aa|down_8|CP029773.1_2713717_2714398_-	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone	NA|515aa|down_9|CP029773.1_2714397_2715942_-	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	7	3099761-3099869	6	CRISPRCasFinder	no	DEDDh	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Unclear	AGTCGAGCATGGCTCGACTCTACAG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA,NA|100aa|down_8|CP029773.1_3108332_3108632_+,NA|105aa|down_9|CP029773.1_3108639_3108954_+	NA|330aa|up_9|CP029773.1_3085068_3086058_+	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|843aa|up_8|CP029773.1_3086101_3088630_-	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|905aa|up_7|CP029773.1_3088761_3091476_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|355aa|up_6|CP029773.1_3091694_3092759_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|243aa|up_5|CP029773.1_3092806_3093535_-	pfam11218, DUF3011, Protein of unknown function (DUF3011)	NA|319aa|up_4|CP029773.1_3093674_3094631_-	TIGR00462, genX, EF-P lysine aminoacylase GenX	NA|162aa|up_3|CP029773.1_3094627_3095113_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|822aa|up_2|CP029773.1_3095162_3097628_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|375aa|up_1|CP029773.1_3097943_3099068_+	PRK09105, PRK09105, pyridoxal phosphate-dependent aminotransferase	NA|149aa|up_0|CP029773.1_3099243_3099690_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|246aa|down_0|CP029773.1_3099877_3100615_-	PRK04570, PRK04570, cell division protein ZipA; Provisional	NA|1168aa|down_1|CP029773.1_3100661_3104165_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|150aa|down_2|CP029773.1_3104424_3104874_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|77aa|down_3|CP029773.1_3104979_3105210_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|146aa|down_4|CP029773.1_3105221_3105659_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|181aa|down_5|CP029773.1_3105819_3106362_-	pfam03691, UPF0167, Uncharacterized protein family (UPF0167)	NA|113aa|down_6|CP029773.1_3106440_3106779_-	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones]	NA|465aa|down_7|CP029773.1_3106907_3108302_+	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|100aa|down_8|CP029773.1_3108332_3108632_+	NA	NA|105aa|down_9|CP029773.1_3108639_3108954_+	NA
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	8	3117481-3117575	7	CRISPRCasFinder	no	DEDDh,csa3	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Type I-A	GGTAGGTGCCCACCTTGGTGGGCA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA|105aa|up_9|CP029773.1_3108639_3108954_+,NA	NA|105aa|up_9|CP029773.1_3108639_3108954_+	NA	NA|213aa|up_8|CP029773.1_3108961_3109600_+	pfam04299, FMN_bind_2, Putative FMN-binding domain	NA|221aa|up_7|CP029773.1_3109672_3110335_+	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|174aa|up_6|CP029773.1_3110354_3110876_+	PRK13264, PRK13264, 3-hydroxyanthranilate 3,4-dioxygenase; Provisional	NA|425aa|up_5|CP029773.1_3111080_3112355_+	TIGR01814, kynureninase, kynureninase	NA|456aa|up_4|CP029773.1_3112386_3113754_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	DEDDh|480aa|up_3|CP029773.1_3113753_3115193_+	PRK11779, sbcB, exonuclease I; Provisional	NA|229aa|up_2|CP029773.1_3115189_3115876_+	TIGR02453, conserved_hypothetical_protein, TIGR02453 family protein	NA|327aa|up_1|CP029773.1_3115875_3116856_+	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins	NA|184aa|up_0|CP029773.1_3116898_3117450_+	pfam11159, DUF2939, Protein of unknown function (DUF2939)	NA|315aa|down_0|CP029773.1_3117618_3118563_-	pfam06189, 5-nucleotidase, 5'-nucleotidase	NA|258aa|down_1|CP029773.1_3118610_3119384_-	PRK04761, ppnK, inorganic polyphosphate/ATP-NAD kinase; Reviewed	NA|1659aa|down_2|CP029773.1_3119766_3124743_-	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase	NA|219aa|down_3|CP029773.1_3124993_3125650_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|423aa|down_4|CP029773.1_3125649_3126918_+	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1058aa|down_5|CP029773.1_3126933_3130107_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|383aa|down_6|CP029773.1_3132477_3133626_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	csa3|310aa|down_7|CP029773.1_3133779_3134709_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|364aa|down_8|CP029773.1_3134722_3135814_+	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|895aa|down_9|CP029773.1_3135871_3138556_+	PRK09490, metH, B12-dependent methionine synthase; Provisional
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	9	4018663-4018751	8	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Orphan	GGTAGAGCCGGCCGCTGGCCGGCCGTCG	28	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA,NA	NA|226aa|up_9|CP029773.1_4005258_4005936_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|216aa|up_8|CP029773.1_4006076_4006724_+	COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|453aa|up_7|CP029773.1_4006740_4008099_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|407aa|up_6|CP029773.1_4008167_4009388_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|433aa|up_5|CP029773.1_4009603_4010902_-	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	NA|306aa|up_4|CP029773.1_4010962_4011880_+	PRK08733, PRK08733, LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase	NA|444aa|up_3|CP029773.1_4011980_4013312_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|372aa|up_2|CP029773.1_4013292_4014408_-	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences	NA|66aa|up_1|CP029773.1_4014423_4014621_-	COG4391, COG4391, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1115aa|up_0|CP029773.1_4015043_4018388_+	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|764aa|down_0|CP029773.1_4018869_4021161_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|448aa|down_1|CP029773.1_4021391_4022735_-	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed	NA|390aa|down_2|CP029773.1_4023067_4024237_+	COG3746, OprP, Phosphate-selective porin [Inorganic ion transport and metabolism]	NA|883aa|down_3|CP029773.1_4024303_4026952_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|151aa|down_4|CP029773.1_4027003_4027456_-	pfam05117, DUF695, Family of unknown function (DUF695)	NA|216aa|down_5|CP029773.1_4027459_4028107_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|352aa|down_6|CP029773.1_4028135_4029191_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|464aa|down_7|CP029773.1_4029187_4030579_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|230aa|down_8|CP029773.1_4030571_4031261_-	PRK15479, PRK15479, transcriptional regulator TctD	NA|380aa|down_9|CP029773.1_4031503_4032643_+	COG3746, OprP, Phosphate-selective porin [Inorganic ion transport and metabolism]
GCA_003205835.1_ASM320583v1	CP029773	Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome	10	4432793-4432903	9	CRISPRCasFinder	no	PD-DExK	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	Unclear	GGTACTGCCGGCCGCTGGCCGGCAACCTCGCGAAC	35	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,PD-DExK,Cas9_archaeal,DinG	NA,NA|208aa|down_8|CP029773.1_4440885_4441509_-,NA|182aa|down_9|CP029773.1_4441634_4442180_+	NA|265aa|up_9|CP029773.1_4423828_4424623_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|344aa|up_8|CP029773.1_4424697_4425729_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|196aa|up_7|CP029773.1_4425745_4426333_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|263aa|up_6|CP029773.1_4426335_4427124_-	pfam04402, SIMPL, Protein of unknown function (DUF541)	NA|492aa|up_5|CP029773.1_4427191_4428667_-	PRK13565, PRK13565, anthranilate synthase component I; Provisional	NA|318aa|up_4|CP029773.1_4428865_4429819_-	PRK13054, PRK13054, lipid kinase; Reviewed	NA|161aa|up_3|CP029773.1_4430102_4430585_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|225aa|up_2|CP029773.1_4430642_4431317_-	PRK08745, PRK08745, ribulose-phosphate 3-epimerase; Provisional	NA|110aa|up_1|CP029773.1_4431347_4431677_-	PRK09430, djlA, co-chaperone DjlA	NA|311aa|up_0|CP029773.1_4431815_4432748_+	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|162aa|down_0|CP029773.1_4432967_4433453_+	COG4539, COG4539, Predicted membrane protein [Function unknown]	NA|944aa|down_1|CP029773.1_4433786_4436618_+	PRK12648, PRK12648, putative monovalent cation/H+ antiporter subunit A; Reviewed	NA|131aa|down_2|CP029773.1_4436617_4437010_+	PRK09094, PRK09094, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|512aa|down_3|CP029773.1_4437006_4438542_+	PRK12666, PRK12666, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|169aa|down_4|CP029773.1_4438538_4439045_+	PRK08965, PRK08965, putative monovalent cation/H+ antiporter subunit E; Reviewed	NA|95aa|down_5|CP029773.1_4439041_4439326_+	PRK06161, PRK06161, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|130aa|down_6|CP029773.1_4439322_4439712_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|322aa|down_7|CP029773.1_4439846_4440812_-	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|208aa|down_8|CP029773.1_4440885_4441509_-	NA	NA|182aa|down_9|CP029773.1_4441634_4442180_+	NA
