assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003255895.1_ASM325589v1	CP021963	Citrobacter youngae strain L6 chromosome, complete genome	1	1010000-1011310	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	RT,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	20,21,21	21	TypeI-E	RT,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA|61aa|up_9|CP021963.1_1000067_1000250_-,NA	NA|61aa|up_9|CP021963.1_1000067_1000250_-	NA	NA|245aa|up_8|CP021963.1_1000194_1000929_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|900aa|up_7|CP021963.1_1000973_1003673_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|512aa|up_6|CP021963.1_1004028_1005564_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|201aa|up_5|CP021963.1_1005579_1006182_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|353aa|up_4|CP021963.1_1006204_1007263_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|242aa|up_3|CP021963.1_1007272_1007998_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|235aa|up_2|CP021963.1_1007997_1008702_+	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|306aa|up_1|CP021963.1_1008701_1009619_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP021963.1_1009621_1009915_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|CP021963.1_1011401_1012448_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP021963.1_1012702_1013611_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|CP021963.1_1013620_1015048_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP021963.1_1015047_1015653_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|CP021963.1_1015700_1016024_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP021963.1_1016238_1016550_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|232aa|down_6|CP021963.1_1016568_1017264_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP021963.1_1017319_1017799_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP021963.1_1017795_1018845_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP021963.1_1018825_1019587_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_003255895.1_ASM325589v1	CP021963	Citrobacter youngae strain L6 chromosome, complete genome	2	2815835-2815958	2	CRISPRCasFinder	no		RT,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Orphan	TAGGCCTGATAAGCACAGCGCATCAGGCAGTT	32	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA|117aa|down_1|CP021963.1_2817273_2817624_-,NA|81aa|down_2|CP021963.1_2817634_2817877_-	NA|279aa|up_9|CP021963.1_2806304_2807141_-	TIGR00167, Fructose-bisphosphate_aldolase, ketose-bisphosphate aldolase	NA|348aa|up_8|CP021963.1_2807165_2808209_-	cd05285, sorbitol_DH, Sorbitol dehydrogenase	NA|460aa|up_7|CP021963.1_2808226_2809606_-	TIGR00895, transport_protein, benzoate transport	NA|359aa|up_6|CP021963.1_2809632_2810709_-	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family	NA|418aa|up_5|CP021963.1_2811005_2812259_+	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|115aa|up_4|CP021963.1_2812352_2812697_+	PRK11295, PRK11295, HNH nuclease family protein	NA|92aa|up_3|CP021963.1_2812742_2813018_-	COG3139, COG3139, Uncharacterized protein conserved in bacteria [Function unknown]	NA|138aa|up_2|CP021963.1_2813060_2813474_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|332aa|up_1|CP021963.1_2813815_2814811_+	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase	NA|295aa|up_0|CP021963.1_2814883_2815768_+	COG0676, COG0676, Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]	NA|284aa|down_0|CP021963.1_2816241_2817093_-	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins	NA|117aa|down_1|CP021963.1_2817273_2817624_-	NA	NA|81aa|down_2|CP021963.1_2817634_2817877_-	NA	NA|249aa|down_3|CP021963.1_2818457_2819204_-	COG3713, OmpV, Outer membrane protein V [Cell envelope biogenesis, outer membrane]	NA|645aa|down_4|CP021963.1_2819637_2821572_+	PRK15455, PRK15455, PrkA family serine protein kinase; Provisional	NA|428aa|down_5|CP021963.1_2821693_2822977_+	pfam04285, DUF444, Protein of unknown function (DUF444)	NA|257aa|down_6|CP021963.1_2823071_2823842_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|497aa|down_7|CP021963.1_2824006_2825497_+	pfam17155, GAPES1, Gammaproteobacterial periplasmic sensor domain	NA|168aa|down_8|CP021963.1_2825541_2826045_+	cd04336, YeaK, YeaK is an uncharacterized Echerichia coli protein with a YbaK-like domain of unknown function	NA|149aa|down_9|CP021963.1_2826182_2826629_+	COG2707, COG2707, Predicted membrane protein [Function unknown]
GCA_003255895.1_ASM325589v1	CP021963	Citrobacter youngae strain L6 chromosome, complete genome	3	4562263-4562411	3	CRISPRCasFinder	no		RT,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Orphan	CTTGCGCCGCATCCGGCAACCGTTGTGCCTGATGGCGCTGCGCTTATCAG	50	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|297aa|up_9|CP021963.1_4549836_4550727_+	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold	NA|164aa|up_8|CP021963.1_4550804_4551296_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|549aa|up_7|CP021963.1_4551484_4553131_-	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309	NA|450aa|up_6|CP021963.1_4553288_4554638_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|153aa|up_5|CP021963.1_4555246_4555705_-	PRK15002, PRK15002, redox-sensitive transcriptional activator SoxR	NA|108aa|up_4|CP021963.1_4555791_4556115_+	PRK10219, PRK10219, superoxide response transcriptional regulator SoxS	NA|529aa|up_3|CP021963.1_4556117_4557704_-	COG4943, COG4943, Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]	NA|94aa|up_2|CP021963.1_4558256_4558538_+	pfam15940, YjcB, Family of unknown function	NA|175aa|up_1|CP021963.1_4558604_4559129_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|941aa|up_0|CP021963.1_4559380_4562203_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|119aa|down_0|CP021963.1_4562486_4562843_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|238aa|down_1|CP021963.1_4562970_4563684_-	PRK11009, aphA, class B acid phosphatase	NA|398aa|down_2|CP021963.1_4563868_4565062_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|360aa|down_3|CP021963.1_4565190_4566270_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|472aa|down_4|CP021963.1_4566286_4567702_-	PRK08006, PRK08006, replicative DNA helicase DnaB	NA|328aa|down_5|CP021963.1_4567766_4568750_+	PRK10754, PRK10754, NADPH:quinone reductase	NA|81aa|down_6|CP021963.1_4568929_4569172_-	PRK09459, pspG, envelope stress response protein PspG	NA|333aa|down_7|CP021963.1_4569305_4570304_-	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|163aa|down_8|CP021963.1_4570411_4570900_-	cd02224, cupin_SPO2919-like, Silicibacter pomeroyi SPO2919 and related proteins, uncharacterized sugar phosphate isomerase with a cupin domain	NA|173aa|down_9|CP021963.1_4571015_4571534_+	PRK11639, PRK11639, zinc uptake transcriptional repressor Zur
