assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003261035.1_ASM326103v1	CP030062	Mannheimia varigena strain Teagasc 1 chromosome, complete genome	1	1717140-1717640	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		RT,cas3,DEDDh,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	GTTTCAACTCACAGCTACGCGAAGGTAGCTGC,GTTTCAACTCACAGCTACGCGAAGGTAGCTGC,GTTTCAACTCACAGCTACGCGAAGGTAGCTGC	32,32,32	0	0	NA	NA	NA:NA:NA	7,7,7	7	Orphan	RT,cas3,DEDDh,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|271aa|up_9|CP030062.1_1705497_1706310_-	TIGR00262, Tryptophan_synthase_alpha_chain, tryptophan synthase, alpha subunit	NA|397aa|up_8|CP030062.1_1706309_1707500_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|251aa|up_7|CP030062.1_1707553_1708306_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|513aa|up_6|CP030062.1_1708540_1710079_-	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|140aa|up_5|CP030062.1_1710511_1710931_+	PRK10328, PRK10328, DNA-binding protein StpA	NA|279aa|up_4|CP030062.1_1711002_1711839_+	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|211aa|up_3|CP030062.1_1711865_1712498_-	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|358aa|up_2|CP030062.1_1712760_1713834_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|501aa|up_1|CP030062.1_1713915_1715418_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|492aa|up_0|CP030062.1_1715567_1717043_-	PRK11712, PRK11712, ribonuclease G; Provisional	NA|811aa|down_0|CP030062.1_1717916_1720349_-	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|292aa|down_1|CP030062.1_1720520_1721396_-	PRK12848, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|254aa|down_2|CP030062.1_1721388_1722150_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|456aa|down_3|CP030062.1_1722216_1723584_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|210aa|down_4|CP030062.1_1723617_1724247_-	PRK00218, PRK00218, lysogenization regulator HflD	NA|556aa|down_5|CP030062.1_1724363_1726031_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_6|CP030062.1_1726030_1727797_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|1368aa|down_7|CP030062.1_1727899_1732003_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|623aa|down_8|CP030062.1_1732068_1733937_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|287aa|down_9|CP030062.1_1733946_1734807_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase
GCA_003261035.1_ASM326103v1	CP030062	Mannheimia varigena strain Teagasc 1 chromosome, complete genome	2	1878767-1879935	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	RT,cas3,DEDDh,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Type I-U, Type I-U?,Type I-C	GTTTCAACTCACAGCCACGCGAACGTGGCTGC,GTTTCAACTCACAGCCACGCGAACGTGGCTGC,GTTTCAACTCACAGCCACGCGAACGTGGCTGC	32,32,32	1	1	1879533-1879568	CP030062.1_1537274-1537239	NA:NA:NA	17,17,17	17	TypeI-U?,TypeI-U,TypeI-C	RT,cas3,DEDDh,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA|64aa|down_2|CP030062.1_1881689_1881881_-	NA|1175aa|up_9|CP030062.1_1863759_1867284_-	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|464aa|up_8|CP030062.1_1867349_1868741_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|203aa|up_7|CP030062.1_1868894_1869503_-	PRK01904, PRK01904, DUF2057 domain-containing protein	NA|305aa|up_6|CP030062.1_1869641_1870556_+	COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	NA|502aa|up_5|CP030062.1_1870612_1872118_+	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|155aa|up_4|CP030062.1_1872164_1872629_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|400aa|up_3|CP030062.1_1872734_1873934_-	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|216aa|up_2|CP030062.1_1873945_1874593_-	PRK09289, PRK09289, riboflavin synthase	NA|362aa|up_1|CP030062.1_1874602_1875688_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|801aa|up_0|CP030062.1_1876196_1878599_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	cas2|98aa|down_0|CP030062.1_1880133_1880427_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|CP030062.1_1880476_1881490_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	NA|64aa|down_2|CP030062.1_1881689_1881881_-	NA	cas4|224aa|down_3|CP030062.1_1881959_1882631_-	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas7|281aa|down_4|CP030062.1_1882632_1883475_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|686aa|down_5|CP030062.1_1883495_1885553_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|241aa|down_6|CP030062.1_1885549_1886272_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|810aa|down_7|CP030062.1_1886291_1888721_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|588aa|down_8|CP030062.1_1888904_1890668_+	TIGR03549, TIGR03549, YcaO domain protein	NA|321aa|down_9|CP030062.1_1890745_1891708_+	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
