The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	565198	575167	4702913	tRNA	uncultured_Mediterranean_phage(25.0%)	10	NA	NA
AXA99994.1|565198_567064_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.6	1.1e-34
AXA99995.1|567277_569065_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.1	1.5e-73
AXA99996.1|569154_569598_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	47.9	1.3e-26
AXA99997.1|569613_569829_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AXA99998.1|570008_571022_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.0	2.6e-107
AXA99999.1|571095_572079_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	33.7	3.8e-34
AXB00001.1|572125_573196_-	LysM peptidoglycan-binding domain-containing protein	NA	I2E8W3	Clostridium_phage	34.9	1.7e-11
AXB03381.1|573205_573781_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00002.1|573783_574401_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	45.4	5.3e-34
AXB00003.1|574405_575167_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.2	1.2e-67
>prophage 2
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	872969	911483	4702913	transposase,integrase,protease	uncultured_Caudovirales_phage(20.0%)	24	900533:900548	917156:917171
AXB00268.1|872969_874313_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
AXB00269.1|874406_874952_+	DUF615 domain-containing protein	NA	NA	NA	NA	NA
AXB00270.1|875038_878122_-	carboxypeptidase	NA	NA	NA	NA	NA
AXB00271.1|878335_878653_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00272.1|884675_885872_+	heme-Cu protein NnrS	NA	NA	NA	NA	NA
AXB00273.1|885872_886445_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXB03407.1|886519_887710_+	hypothetical protein	NA	NA	NA	NA	NA
AXB00274.1|887857_888922_+	DUF3103 domain-containing protein	NA	NA	NA	NA	NA
AXB00275.1|888985_889882_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
AXB00276.1|890209_891001_+	N-acetyltransferase	NA	NA	NA	NA	NA
AXB00277.1|891061_892525_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXB00278.1|892533_894513_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.9	4.0e-19
AXB00279.1|894710_895322_-	outer membrane protein OmpW	NA	NA	NA	NA	NA
AXB00280.1|895868_898697_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.3	0.0e+00
AXB00281.1|898790_899450_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXB00282.1|899947_900517_+	single-stranded DNA-binding protein	NA	R9TR60	Vibrio_phage	60.1	6.5e-55
900533:900548	attL	AAAGTGTAAGAATAAA	NA	NA	NA	NA
AXB00283.1|900648_902007_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
AXB00284.1|901999_903343_+|integrase	integrase	integrase	NA	NA	NA	NA
AXB00285.1|903370_904513_+|transposase	IS4/IS5 family transposase	transposase	NA	NA	NA	NA
AXB00286.1|904847_906725_+|integrase	integrase	integrase	NA	NA	NA	NA
AXB00287.1|906712_907192_+	hypothetical protein	NA	NA	NA	NA	NA
AXB00288.1|907191_907629_+	hypothetical protein	NA	NA	NA	NA	NA
AXB00289.1|907625_909788_+	AAA family ATPase	NA	A0A2I2L5Q3	Orpheovirus	25.9	1.1e-20
AXB03408.1|910279_911483_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	70.1	4.5e-114
917156:917171	attR	AAAGTGTAAGAATAAA	NA	NA	NA	NA
>prophage 3
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	1186297	1246568	4702913	transposase,tRNA,holin,protease	Streptococcus_phage(20.0%)	50	NA	NA
AXB03421.1|1186297_1186486_-|holin	holin	holin	NA	NA	NA	NA
AXB00522.1|1186907_1188557_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AXB00523.1|1188720_1190202_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AXB00524.1|1190395_1191289_+	HTH-type transcriptional activator IlvY	NA	NA	NA	NA	NA
AXB00525.1|1191396_1191588_+	hypothetical protein	NA	NA	NA	NA	NA
AXB00526.1|1191678_1194252_+	protein acetyltransferase	NA	NA	NA	NA	NA
AXB00527.1|1199903_1200497_-	menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA	NA	NA	NA	NA
AXB00528.1|1200435_1201893_-	potassium transporter	NA	NA	NA	NA	NA
AXB00529.1|1201929_1202547_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	36.6	9.3e-23
AXB00530.1|1202546_1203869_-	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
AXB00531.1|1204065_1206003_+	acetoacetate--CoA ligase	NA	NA	NA	NA	NA
AXB00532.1|1206207_1208355_+	fatty acid oxidation complex subunit alpha FadB	NA	NA	NA	NA	NA
AXB00533.1|1208376_1209540_+	acetyl-CoA C-acyltransferase FadA	NA	NA	NA	NA	NA
AXB00534.1|1209875_1210610_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXB03422.1|1210753_1212169_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
AXB00535.1|1212172_1213429_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXB00536.1|1213473_1213665_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00537.1|1214056_1214302_+	sulfurtransferase TusA	NA	A0A140XB86	Dickeya_phage	72.2	3.7e-07
AXB00538.1|1214320_1214668_+	RidA family protein	NA	NA	NA	NA	NA
AXB00539.1|1214806_1215463_-	OmpA family lipoprotein	NA	NA	NA	NA	NA
AXB00540.1|1215625_1215868_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00541.1|1216301_1216862_+	cysteine hydrolase	NA	NA	NA	NA	NA
AXB00542.1|1216917_1217496_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AXB00543.1|1217683_1218607_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AXB00544.1|1218616_1220698_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AXB00545.1|1221828_1222791_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXB00546.1|1222922_1224449_-	nitric oxide reductase transcriptional regulator NorR	NA	NA	NA	NA	NA
AXB00547.1|1224619_1226104_+	anaerobic nitric oxide reductase flavorubredoxin	NA	NA	NA	NA	NA
AXB00548.1|1226100_1227252_+	NADH:flavorubredoxin reductase NorW	NA	NA	NA	NA	NA
AXB00549.1|1227303_1227642_+	DUF1971 domain-containing protein	NA	NA	NA	NA	NA
AXB00550.1|1227764_1228982_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
AXB00551.1|1229159_1229243_+	tryptophanase leader peptide	NA	NA	NA	NA	NA
AXB00552.1|1229446_1230913_+	tryptophanase	NA	NA	NA	NA	NA
AXB00553.1|1230983_1232198_+|transposase	transposase	transposase	NA	NA	NA	NA
AXB00554.1|1232396_1233617_+|transposase	transposase	transposase	NA	NA	NA	NA
AXB00555.1|1233710_1234115_-	g-type lysozyme inhibitor	NA	NA	NA	NA	NA
AXB00556.1|1234195_1234396_+	hypothetical protein	NA	NA	NA	NA	NA
AXB00557.1|1234453_1235227_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00558.1|1235392_1236157_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AXB00559.1|1236338_1237301_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXB00560.1|1237330_1238335_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	32.1	1.4e-31
AXB03423.1|1238788_1239892_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXB00561.1|1239958_1240885_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AXB00562.1|1240964_1242236_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AXB00563.1|1242232_1243006_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.0	3.8e-13
AXB00564.1|1243016_1243718_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.2	1.5e-16
AXB00565.1|1243800_1244646_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXB03424.1|1244624_1245194_-	LysE family translocator	NA	NA	NA	NA	NA
AXB00566.1|1245381_1245705_+	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
AXB03425.1|1245734_1246568_+|protease	rhomboid family intramembrane serine protease GlpG	protease	NA	NA	NA	NA
>prophage 4
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	1302670	1330556	4702913	transposase,tRNA,integrase	Escherichia_phage(37.5%)	29	1312323:1312338	1336977:1336992
AXB00608.1|1302670_1304560_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AXB03434.1|1305068_1305620_-	sulfite reductase	NA	NA	NA	NA	NA
AXB00609.1|1305889_1307998_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXB00610.1|1308058_1309705_+	multidrug ABC transporter permease/ATP-binding protein	NA	NA	NA	NA	NA
AXB00611.1|1309751_1310516_+	iron-hydroxamate transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	25.7	5.0e-10
AXB03435.1|1310547_1311450_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXB00612.1|1311446_1313429_+	Fe(3+)-hydroxamate ABC transporter permease FhuB	NA	NA	NA	NA	NA
1312323:1312338	attL	GATCTGCTGCTGCAGA	NA	NA	NA	NA
AXB00613.1|1313848_1315168_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AXB00614.1|1315167_1315422_-	transcriptional regulator	NA	NA	NA	NA	NA
AXB03436.1|1315864_1317068_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	70.1	4.5e-114
AXB00615.1|1317202_1317517_-|transposase	transposase	transposase	NA	NA	NA	NA
AXB00616.1|1317455_1318469_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AXB00617.1|1318613_1319111_+	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
AXB00618.1|1319518_1320310_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AXB00619.1|1320473_1320821_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AXB00620.1|1320814_1321654_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA	NA
AXB00621.1|1321583_1321763_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00622.1|1321781_1321985_+	hypothetical protein	NA	NA	NA	NA	NA
AXB00623.1|1322140_1323346_+	chromate transporter	NA	NA	NA	NA	NA
AXB00624.1|1323356_1323662_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AXB00625.1|1323677_1323860_-	resolvase	NA	NA	NA	NA	NA
AXB00626.1|1323888_1324653_+|transposase	IS6 family transposase IS6100	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
AXB00627.1|1324843_1325200_-	hypothetical protein	NA	NA	NA	NA	NA
AXB00628.1|1325145_1325730_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXB00629.1|1325729_1326968_-	MFS transporter	NA	NA	NA	NA	NA
AXB00630.1|1326964_1327870_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
AXB00631.1|1327991_1328696_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	3.1e-139
AXB00632.1|1328846_1329662_+	aminoglycoside O-phosphotransferase APH(3')-Ia	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	100.0	6.1e-163
AXB00633.1|1329851_1330556_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	3.1e-139
1336977:1336992	attR	TCTGCAGCAGCAGATC	NA	NA	NA	NA
>prophage 5
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	2257446	2291818	4702913	capsid,head,portal,integrase,terminase,tail,holin	Vibrio_phage(25.0%)	44	2256853:2256868	2263144:2263159
2256853:2256868	attL	GGTTCGTCCAGCAGCA	NA	NA	NA	NA
AXB01394.1|2257446_2258754_-|integrase	integrase	integrase	Q8W658	Enterobacteria_phage	40.4	2.3e-79
AXB01395.1|2258729_2258939_-	hypothetical protein	NA	NA	NA	NA	NA
AXB01396.1|2259005_2259479_-	single-stranded DNA-binding protein	NA	R9TR60	Vibrio_phage	61.5	7.6e-49
AXB01397.1|2259478_2259736_-	hypothetical protein	NA	NA	NA	NA	NA
AXB01398.1|2259791_2259986_-	hypothetical protein	NA	NA	NA	NA	NA
AXB01399.1|2259961_2260399_-	hypothetical protein	NA	NA	NA	NA	NA
AXB01400.1|2260395_2262123_-	multidrug DMT transporter	NA	Q5QF27	Pseudomonas_virus	42.6	1.8e-140
AXB01401.1|2263902_2264106_-	hypothetical protein	NA	NA	NA	NA	NA
2263144:2263159	attR	GGTTCGTCCAGCAGCA	NA	NA	NA	NA
AXB01402.1|2265924_2266617_-	LexA family transcriptional repressor	NA	B1B6L9	Salmonella_phage	39.2	8.5e-25
AXB01403.1|2266724_2266943_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01404.1|2266962_2267472_+	transcriptional regulator	NA	Q6JIG6	Burkholderia_virus	35.0	1.0e-11
AXB03490.1|2267588_2267819_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01405.1|2268874_2269363_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01406.1|2269362_2269623_+	hypothetical protein	NA	A0A1I9KFB1	Aeromonas_phage	52.5	7.4e-14
AXB01407.1|2269619_2270348_+	site-specific DNA-methyltransferase	NA	A0A2I7QM56	Vibrio_phage	65.4	3.6e-90
AXB03491.1|2270347_2270575_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01408.1|2270571_2270781_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01409.1|2270773_2271079_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01410.1|2271068_2271458_+	hypothetical protein	NA	A0A1V0E824	Vibrio_phage	52.3	1.0e-19
AXB01411.1|2271561_2272371_+	hypothetical protein	NA	U5P4K5	Shigella_phage	35.6	1.3e-29
AXB01412.1|2272472_2272697_+	hypothetical protein	NA	E8ZD70	Streptococcus_phage	53.4	1.7e-14
AXB01413.1|2272826_2273090_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01414.1|2273086_2274076_+	hypothetical protein	NA	R9TRM9	Vibrio_phage	30.2	1.7e-34
AXB03492.1|2274195_2274441_+	hypothetical protein	NA	A0A067ZIN8	Vibrio_phage	58.2	1.4e-19
AXB03493.1|2274527_2275070_+	antitermination protein	NA	NA	NA	NA	NA
AXB01415.1|2275779_2275992_+	hypothetical protein	NA	A0A2D0YLN6	Vibrio_phage	55.2	1.4e-15
AXB01416.1|2276736_2277018_+	hypothetical protein	NA	M9Q2L4	Clostridium_phage	45.5	3.8e-08
AXB01417.1|2277066_2278341_-	protein UmuC	NA	F1C5A5	Cronobacter_phage	55.5	4.2e-126
AXB01418.1|2278343_2278760_-	UV protection and mutation protein	NA	A0A1W6JNS2	Morganella_phage	51.1	2.5e-32
AXB01419.1|2278923_2279553_+	DUF159 family protein	NA	C7BGE4	Burkholderia_phage	43.6	2.3e-45
AXB01420.1|2281141_2281567_+	preprotein translocase subunit SecB	NA	NA	NA	NA	NA
AXB01421.1|2281808_2282039_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01422.1|2282035_2282401_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03494.1|2282565_2282889_+|holin	phage holin, lambda family	holin	A5X9I3	Aeromonas_virus	52.5	1.3e-20
AXB01423.1|2282875_2283394_+	glycoside hydrolase	NA	V5YSX1	Pseudomonas_phage	77.2	1.3e-70
AXB01424.1|2283390_2283933_+	DUF2514 domain-containing protein	NA	A0A2D1GNE2	Pseudomonas_phage	52.5	9.4e-11
AXB01425.1|2284019_2284400_+	HNH endonuclease	NA	A0A1V0E8A5	Vibrio_phage	58.1	8.0e-33
AXB01426.1|2284495_2284981_+|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	59.0	5.6e-47
AXB01427.1|2284990_2286712_+|terminase	terminase	terminase	U5P0Q5	Shigella_phage	74.5	7.1e-262
AXB01428.1|2286705_2286894_+	hypothetical protein	NA	A0A1B5FP99	Escherichia_phage	61.5	7.7e-05
AXB01429.1|2286893_2288147_+|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	65.4	7.4e-160
AXB01430.1|2288134_2289070_+	serine peptidase	NA	Q6UAX7	Klebsiella_phage	51.1	1.3e-79
AXB01431.1|2289974_2291264_+|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	62.7	3.8e-143
AXB01432.1|2291506_2291818_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J8C5	uncultured_Caudovirales_phage	40.4	4.1e-11
>prophage 6
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	2929029	2936426	4702913		Escherichia_phage(50.0%)	7	NA	NA
AXB01955.1|2929029_2929737_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.6	4.9e-28
AXB01956.1|2930640_2931726_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	51.5	9.1e-98
AXB01957.1|2931725_2932613_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.1	2.6e-26
AXB01958.1|2932725_2933604_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	63.1	8.1e-105
AXB01959.1|2933665_2934211_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.6	1.1e-51
AXB01960.1|2934301_2935120_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AXB01961.1|2935109_2936426_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.5	9.9e-14
>prophage 7
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	2953316	3012648	4702913	transposase	Helicobacter_phage(33.33%)	53	NA	NA
AXB01976.1|2953316_2954357_+|transposase	IS481-like element ISAs19 family transposase	transposase	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	41.8	1.7e-72
AXB01977.1|2954958_2955492_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01978.1|2955488_2956535_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01979.1|2956524_2957445_+	glycosyl transferase	NA	NA	NA	NA	NA
AXB01980.1|2957434_2958196_+	glycosyl transferase	NA	NA	NA	NA	NA
AXB01981.1|2958268_2959318_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01982.1|2959621_2960737_+	polysaccharide export protein Wza	NA	NA	NA	NA	NA
AXB01983.1|2960976_2961405_+	protein tyrosine phosphatase	NA	NA	NA	NA	NA
AXB01984.1|2961460_2963638_+	tyrosine-protein kinase	NA	NA	NA	NA	NA
AXB03530.1|2964119_2964809_+	YjbF family lipoprotein	NA	NA	NA	NA	NA
AXB01985.1|2964805_2965561_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03531.1|2965590_2967642_+	YjbH domain-containing protein	NA	NA	NA	NA	NA
AXB01986.1|2967728_2969447_+	ligase	NA	NA	NA	NA	NA
AXB01987.1|2969710_2970364_+	DUF480 domain-containing protein	NA	NA	NA	NA	NA
AXB01988.1|2974499_2975393_-	DNA replication protein	NA	NA	NA	NA	NA
AXB01989.1|2975923_2976133_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01990.1|2976402_2977422_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AXB01991.1|2977693_2978782_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
AXB01992.1|2978778_2979765_+	alpha-ketoacid dehydrogenase subunit beta	NA	A0A0K0KW14	Prochlorococcus_phage	28.8	3.0e-07
AXB01993.1|2979859_2980960_+	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
AXB01994.1|2981166_2981376_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.4	2.8e-16
AXB01995.1|2981453_2981765_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01996.1|2981751_2982000_-	TIGR02647 family protein	NA	NA	NA	NA	NA
AXB01997.1|2982246_2982795_+	hypothetical protein	NA	NA	NA	NA	NA
AXB01998.1|2982889_2983282_+	DUF2750 domain-containing protein	NA	NA	NA	NA	NA
AXB01999.1|2983368_2985219_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXB02000.1|2985309_2986203_-	EamA family transporter	NA	NA	NA	NA	NA
AXB02001.1|2986475_2986880_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	54.8	6.7e-30
AXB02002.1|2986937_2988164_+|transposase	transposase	transposase	O80301	Enterobacteria_phage	78.6	7.7e-154
AXB02003.1|2988247_2989438_-	phosphodiesterase	NA	NA	NA	NA	NA
AXB02004.1|2989610_2990303_+	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA	NA
AXB02005.1|2990404_2991307_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AXB02006.1|2991596_2993234_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXB02007.1|2993316_2993721_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	54.8	6.7e-30
AXB02008.1|2993778_2995005_+|transposase	transposase	transposase	O80301	Enterobacteria_phage	78.6	7.7e-154
AXB03532.1|2995057_2995585_+	phosphodiesterase	NA	NA	NA	NA	NA
AXB03533.1|2995628_2996042_-	flagellar protein FlgN	NA	NA	NA	NA	NA
AXB02009.1|2996041_2996362_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
AXB02010.1|2996456_2997140_-	flagella basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
AXB02011.1|2997299_2998211_+	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	32.8	1.3e-36
AXB02012.1|2998228_2999053_+	chemotaxis protein CheR	NA	NA	NA	NA	NA
AXB02013.1|2999114_2999516_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
AXB02014.1|2999512_2999932_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
AXB02015.1|3000022_3000760_+	flagellar biosynthesis protein FlgD	NA	NA	NA	NA	NA
AXB02016.1|3000770_3002636_+	flagellar hook protein FlgE	NA	NA	NA	NA	NA
AXB02017.1|3002782_3003529_+	flagellar biosynthesis protein FlgF	NA	NA	NA	NA	NA
AXB02018.1|3003543_3004332_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
AXB02019.1|3004348_3005020_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
AXB02020.1|3005080_3006178_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
AXB02021.1|3007327_3009325_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
AXB02022.1|3009328_3010537_+	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
AXB02023.1|3011007_3012324_+	magnesium transporter	NA	NA	NA	NA	NA
AXB02024.1|3012243_3012648_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	54.8	2.0e-29
>prophage 8
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	3275595	3283251	4702913		Mycoplasma_phage(33.33%)	8	NA	NA
AXB02220.1|3275595_3276810_+	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.3	2.3e-33
AXB02221.1|3276864_3277248_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	2.8e-54
AXB02222.1|3277263_3277587_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	43.9	1.2e-21
AXB02223.1|3277777_3278296_+	co-chaperone HscB	NA	NA	NA	NA	NA
AXB02224.1|3278324_3280172_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.6	3.8e-104
AXB02225.1|3280173_3280512_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AXB02226.1|3280669_3281971_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	35.6	1.0e-34
AXB02227.1|3281967_3283251_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	37.4	3.3e-30
>prophage 9
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	4537612	4587973	4702913	capsid,bacteriocin,portal,integrase,terminase	Aeromonas_phage(85.45%)	66	4524738:4524767	4584536:4584565
4524738:4524767	attL	CGGGGGTTCAAATCCCCCCAGCTCCACCAA	NA	NA	NA	NA
AXB03195.1|4537612_4538533_-	hypothetical protein	NA	M9NYX6	Enterobacteria_phage	38.4	4.6e-50
AXB03196.1|4538607_4540221_-	hypothetical protein	NA	A0A1I9KFD9	Aeromonas_phage	31.0	5.8e-48
AXB03197.1|4540233_4540491_-|bacteriocin	bacteriocin	bacteriocin	A0A1I9KFI4	Aeromonas_phage	95.3	6.6e-23
AXB03198.1|4540490_4540871_-	hypothetical protein	NA	A0A1I9KFD7	Aeromonas_phage	88.9	6.9e-53
AXB03199.1|4540880_4541513_-	hypothetical protein	NA	A0A1I9KFE8	Aeromonas_phage	74.1	5.0e-72
AXB03200.1|4541523_4541901_-	hypothetical protein	NA	A0A1I9KFI0	Aeromonas_phage	81.5	5.6e-55
AXB03201.1|4541879_4547264_-	hypothetical protein	NA	A0A1I9KGC4	Aeromonas_phage	58.1	1.0e-149
AXB03202.1|4547263_4548925_-	hypothetical protein	NA	A0A1I9KFD2	Aeromonas_phage	93.3	0.0e+00
AXB03203.1|4549028_4549310_-	hypothetical protein	NA	A0A1I9KG33	Aeromonas_phage	93.5	6.3e-43
AXB03632.1|4549306_4550578_-	RNA-dependent DNA polymerase	NA	A0A1I9KFG3	Aeromonas_phage	99.8	2.1e-250
AXB03204.1|4550595_4550940_-	diversity-generating retroelement protein Avd	NA	A0A1I9KFC4	Aeromonas_phage	99.1	4.2e-57
AXB03205.1|4551001_4552567_-	hypothetical protein	NA	A0A1I9KFH7	Aeromonas_phage	81.5	1.6e-252
AXB03206.1|4552576_4553254_-	hypothetical protein	NA	A0A1I9KFD0	Aeromonas_phage	94.7	2.1e-121
AXB03207.1|4553266_4553848_-	hypothetical protein	NA	A0A1I9KFD5	Aeromonas_phage	99.0	2.2e-106
AXB03208.1|4553849_4554287_-	hypothetical protein	NA	A0A1I9KFH0	Aeromonas_phage	89.7	2.4e-57
AXB03209.1|4554353_4554743_-	hypothetical protein	NA	A0A1I9KGB3	Aeromonas_phage	97.7	2.6e-63
AXB03210.1|4554808_4556026_-|capsid	major capsid protein	capsid	A0A1I9KFC6	Aeromonas_phage	94.1	8.6e-222
AXB03211.1|4556097_4557012_-	hypothetical protein	NA	A0A1I9KFD1	Aeromonas_phage	88.0	5.1e-142
AXB03633.1|4557143_4557728_-	hypothetical protein	NA	A0A1I9KG26	Aeromonas_phage	94.9	1.7e-45
AXB03212.1|4557877_4560004_-|portal	portal protein	portal	A0A1I9KFF7	Aeromonas_phage	98.0	0.0e+00
AXB03634.1|4560003_4561677_-|terminase	terminase	terminase	A0A1I9KFB6	Aeromonas_phage	95.5	0.0e+00
AXB03213.1|4561703_4562576_-|terminase	terminase	terminase	A0A1I9KFG9	Aeromonas_phage	84.8	1.8e-125
AXB03635.1|4562576_4562762_-	hypothetical protein	NA	A0A1I9KFC1	Aeromonas_phage	98.4	3.5e-26
AXB03214.1|4562809_4563040_-	hypothetical protein	NA	A0A1I9KFC5	Aeromonas_phage	100.0	3.9e-35
AXB03215.1|4563041_4563266_-	hypothetical protein	NA	A0A1I9KFG6	Aeromonas_phage	100.0	1.7e-30
AXB03216.1|4563319_4563802_-	TIGR02594 family protein	NA	A0A1I9KGA3	Aeromonas_phage	100.0	7.6e-89
AXB03217.1|4563801_4564116_-	hypothetical protein	NA	A0A1I9KFB8	Aeromonas_phage	99.0	8.8e-54
AXB03218.1|4564284_4564986_-	hypothetical protein	NA	A0A1I9KFB9	Aeromonas_phage	89.7	5.7e-109
AXB03219.1|4564982_4565405_-	hypothetical protein	NA	A0A1I9KG18	Aeromonas_phage	87.1	3.6e-66
AXB03220.1|4565401_4565641_-	hypothetical protein	NA	NA	NA	NA	NA
AXB03221.1|4565637_4565967_-	DUF1364 domain-containing protein	NA	NA	NA	NA	NA
AXB03222.1|4565963_4566557_-	hypothetical protein	NA	A0A0M4QX23	Salmonella_phage	45.5	5.2e-47
AXB03223.1|4566559_4566739_-	hypothetical protein	NA	A0A1I9KFG1	Aeromonas_phage	54.7	1.2e-07
AXB03636.1|4566735_4567029_-	hypothetical protein	NA	A0A1I9KG94	Aeromonas_phage	91.8	3.1e-45
AXB03224.1|4567105_4567408_-	hypothetical protein	NA	A0A1I9KFB1	Aeromonas_phage	90.0	8.5e-46
AXB03225.1|4567409_4567589_-	hypothetical protein	NA	NA	NA	NA	NA
AXB03226.1|4567588_4568932_-	replicative DNA helicase	NA	O80281	Escherichia_phage	38.0	1.3e-66
AXB03227.1|4569689_4569821_-	adenylate cyclase	NA	NA	NA	NA	NA
AXB03228.1|4570019_4570238_-	hypothetical protein	NA	A0A1I9KFG0	Aeromonas_phage	93.1	2.6e-28
AXB03229.1|4570241_4570631_-	hypothetical protein	NA	A0A1I9KF96	Aeromonas_phage	95.8	2.8e-57
AXB03230.1|4570672_4570888_-	hypothetical protein	NA	NA	NA	NA	NA
AXB03637.1|4571019_4571640_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXB03231.1|4572253_4572508_+	hypothetical protein	NA	A0A1I9KF98	Aeromonas_phage	84.5	1.7e-26
AXB03232.1|4572820_4573312_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03233.1|4573388_4573580_+	hypothetical protein	NA	A0A1I9KG01	Aeromonas_phage	90.3	4.1e-22
AXB03234.1|4573582_4573948_+	hypothetical protein	NA	A0A1I9KFC9	Aeromonas_phage	87.6	4.2e-55
AXB03235.1|4573944_4574262_+	hypothetical protein	NA	H9C0T7	Aeromonas_phage	41.0	2.8e-07
AXB03236.1|4574258_4575104_+	exodeoxyribonuclease VIII	NA	A0A1I9KFF5	Aeromonas_phage	96.1	2.6e-164
AXB03237.1|4575100_4576078_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	95.1	1.4e-182
AXB03238.1|4576126_4577215_+	hypothetical protein	NA	A0A1I9KFA0	Aeromonas_phage	95.1	1.5e-103
AXB03239.1|4577264_4578482_+	hypothetical protein	NA	A0A1I9KG78	Aeromonas_phage	87.4	1.6e-172
AXB03240.1|4578478_4579063_+	adenine methylase	NA	A0A2I7QNI8	Vibrio_phage	58.5	1.5e-59
AXB03241.1|4579121_4579301_+	hypothetical protein	NA	A0A1I9KFZ1	Aeromonas_phage	91.5	8.3e-25
AXB03242.1|4579321_4580233_+	recombination-associated protein RdgC	NA	A0A1I9KF67	Aeromonas_phage	52.2	9.7e-85
AXB03243.1|4580229_4580574_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03244.1|4580570_4581350_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03245.1|4581313_4581532_+	hypothetical protein	NA	A0A1I9KF77	Aeromonas_phage	94.4	1.0e-32
AXB03246.1|4581575_4582277_+	hypothetical protein	NA	A0A1I9KF90	Aeromonas_phage	75.0	9.4e-96
AXB03247.1|4582280_4582592_+	nucleoside 2-deoxyribosyltransferase	NA	A0A1I9KFD3	Aeromonas_phage	99.0	4.8e-52
AXB03248.1|4582728_4583166_+	hypothetical protein	NA	A0A1I9KG69	Aeromonas_phage	78.8	1.9e-46
AXB03249.1|4583158_4583356_+	excisionase	NA	I6PBM8	Cronobacter_phage	57.4	3.3e-14
AXB03250.1|4583322_4584498_+|integrase	integrase	integrase	I6PDJ1	Cronobacter_phage	60.5	9.8e-130
AXB03251.1|4584728_4585967_+	DUF4102 domain-containing protein	NA	A0A1V0E8G8	Vibrio_phage	48.9	2.1e-114
4584536:4584565	attR	CGGGGGTTCAAATCCCCCCAGCTCCACCAA	NA	NA	NA	NA
AXB03252.1|4586029_4586434_-	transcriptional regulator	NA	NA	NA	NA	NA
AXB03253.1|4586779_4586986_-	hypothetical protein	NA	NA	NA	NA	NA
AXB03638.1|4587472_4587973_-	transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	50.9	5.4e-37
>prophage 10
CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4702913	4602468	4632510	4702913	transposase	Escherichia_phage(14.29%)	36	NA	NA
AXB03260.1|4602468_4603419_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AXB03261.1|4603585_4604359_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03262.1|4604598_4605741_+|transposase	IS4/IS5 family transposase	transposase	NA	NA	NA	NA
AXB03263.1|4605759_4606701_+|transposase	IS5/IS1182 family transposase	transposase	Q38213	Escherichia_phage	98.7	7.2e-176
AXB03264.1|4606747_4606849_-	ABC transporter	NA	NA	NA	NA	NA
AXB03640.1|4606851_4607922_-	undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
AXB03265.1|4608953_4609268_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
AXB03266.1|4609264_4610086_+|transposase	transposase	transposase	NA	NA	NA	NA
AXB03267.1|4610459_4611227_-	hypothetical protein	NA	A0A249XWN1	Proteus_phage	40.0	2.3e-07
AXB03268.1|4611266_4612268_-	porin OmpA	NA	NA	NA	NA	NA
AXB03269.1|4612469_4613612_+|transposase	IS4/IS5 family transposase	transposase	NA	NA	NA	NA
AXB03270.1|4613665_4614518_+|transposase	IS5/IS1182 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	40.8	3.8e-22
AXB03271.1|4614755_4615157_-	transcriptional regulator	NA	NA	NA	NA	NA
AXB03641.1|4615228_4615825_-	inovirus Gp2 family protein	NA	NA	NA	NA	NA
AXB03272.1|4616350_4617934_-	hypothetical protein	NA	NA	NA	NA	NA
AXB03273.1|4617911_4618160_-	AlpA family phage regulatory protein	NA	A0A2H4J8C8	uncultured_Caudovirales_phage	33.3	9.8e-08
AXB03274.1|4618683_4620471_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03275.1|4621053_4622007_+	hypothetical protein	NA	A0A0H4INH5	Stenotrophomonas_phage	42.2	3.2e-54
AXB03276.1|4622102_4623104_+	endonuclease	NA	A0A139ZPJ9	Marinitoga_camini_virus	46.2	4.1e-44
AXB03277.1|4623100_4624039_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03278.1|4624250_4624811_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03279.1|4624848_4625274_+	DUF2787 domain-containing protein	NA	NA	NA	NA	NA
AXB03280.1|4625284_4625713_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03281.1|4625687_4625972_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03282.1|4626062_4626560_+	DNA repair protein RadC	NA	NA	NA	NA	NA
AXB03283.1|4626556_4626748_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03642.1|4626862_4627111_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03284.1|4627278_4627785_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03643.1|4627919_4629123_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	70.1	4.5e-114
AXB03285.1|4629146_4629338_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03286.1|4629334_4629697_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03287.1|4629775_4630318_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03288.1|4630319_4630676_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03289.1|4630761_4631076_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03644.1|4631141_4631483_+	hypothetical protein	NA	NA	NA	NA	NA
AXB03290.1|4631688_4632510_-|transposase	transposase	transposase	NA	NA	NA	NA
