The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029995	Salmonella enterica subsp. enterica strain SA20053897 chromosome, complete genome	4920300	1266334	1293955	4920300	terminase,integrase,holin	Salmonella_phage(60.61%)	41	1264853:1264867	1284821:1284835
1264853:1264867	attL	ATGGTACGCGTTACA	NA	NA	NA	NA
AXC84956.1|1266334_1267564_+|integrase	integrase	integrase	H6WRW7	Salmonella_phage	94.9	2.0e-234
AXC84957.1|1267541_1267826_-	excisionase Xis	NA	H6WRW8	Salmonella_phage	87.2	8.3e-43
AXC84958.1|1267866_1268106_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
AXC84959.1|1268148_1269231_-	enterohemolysin	NA	K7PKR8	Enterobacteria_phage	51.2	9.1e-98
AXC84960.1|1269241_1272145_-	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	85.8	0.0e+00
AXC84961.1|1272272_1272623_-	DNA breaking-rejoining protein	NA	S4TSN6	Salmonella_phage	98.3	6.4e-61
AXC84962.1|1272644_1272803_-	hypothetical protein	NA	H6WRX3	Salmonella_phage	100.0	2.4e-23
AXC84963.1|1273201_1273606_-	transcriptional regulator	NA	H6WRX4	Salmonella_phage	100.0	4.2e-72
AXC84964.1|1273735_1273972_+	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	100.0	1.8e-38
AXC84965.1|1273937_1274312_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	100.0	3.0e-64
AXC84966.1|1274403_1275330_+	Replication protein O	NA	A0A0M5M7Y1	Salmonella_phage	77.5	2.8e-124
AXC88276.1|1275326_1276022_+	phage replication protein	NA	G8C7U6	Escherichia_phage	47.0	4.5e-58
AXC84967.1|1276035_1276506_+	hypothetical protein	NA	G9L6G6	Escherichia_phage	50.0	2.1e-19
AXC84968.1|1276502_1276937_+	hypothetical protein	NA	H6WRY0	Salmonella_phage	87.8	2.7e-24
AXC84969.1|1276936_1277179_+	hypothetical protein	NA	Q5G8U9	Enterobacteria_phage	77.8	6.8e-30
AXC84970.1|1277180_1277390_+	hypothetical protein	NA	A0A1I9LJM3	Stx_converting_phage	67.6	7.0e-23
AXC84971.1|1277386_1277830_+	hypothetical protein	NA	A0A192Y7X3	Salmonella_phage	54.5	1.6e-32
AXC84972.1|1278636_1278903_+	hypothetical protein	NA	A0A1V0E5L9	Salmonella_phage	95.5	3.1e-44
AXC84973.1|1279119_1279497_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84974.1|1279508_1279745_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84975.1|1279746_1280241_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84976.1|1280224_1280518_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84977.1|1280612_1280816_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84978.1|1280922_1281162_+	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
AXC84979.1|1281151_1281457_+	hypothetical protein	NA	H6WRY6	Salmonella_phage	100.0	9.8e-42
AXC84980.1|1281496_1282099_+	hypothetical protein	NA	H6WRY7	Salmonella_phage	99.0	3.7e-109
AXC84981.1|1282098_1282305_+	hypothetical protein	NA	S4TNP0	Salmonella_phage	100.0	3.5e-35
AXC84982.1|1282307_1282919_+	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	98.5	1.1e-92
AXC84983.1|1282915_1283056_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
AXC84984.1|1283052_1283742_+	antiterminator	NA	I6PDF8	Cronobacter_phage	50.6	2.4e-59
AXC84985.1|1283936_1284284_+|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	80.4	9.8e-46
AXC84986.1|1284286_1284913_+	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	80.7	7.1e-95
1284821:1284835	attR	ATGGTACGCGTTACA	NA	NA	NA	NA
AXC84987.1|1284909_1285461_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AXC84988.1|1285450_1285864_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84989.1|1285925_1286900_+|terminase	terminase small subunit	terminase	C5IHM0	Burkholderia_virus	37.7	4.3e-30
AXC84990.1|1286889_1288161_+	hypothetical protein	NA	A0A0U2JTW9	Escherichia_phage	38.3	2.3e-84
AXC84991.1|1288160_1289591_+	hypothetical protein	NA	A0A0U2S5X9	Escherichia_phage	37.5	2.9e-91
AXC84992.1|1289562_1290438_+	hypothetical protein	NA	A0A0U2I1R8	Escherichia_phage	45.8	1.2e-55
AXC84993.1|1290438_1292013_+	NUDIX hydrolase	NA	Q6UJ14	Burkholderia_virus	48.6	1.7e-20
AXC84994.1|1292033_1292906_+	hypothetical protein	NA	NA	NA	NA	NA
AXC84995.1|1292923_1293955_+	DUF2184 domain-containing protein	NA	A0A0U2QQI2	Escherichia_phage	45.5	1.5e-73
>prophage 2
CP029995	Salmonella enterica subsp. enterica strain SA20053897 chromosome, complete genome	4920300	1398071	1429639	4920300	terminase,integrase,tail	Enterobacter_phage(37.84%)	43	1398256:1398270	1403320:1403334
AXC85083.1|1398071_1399538_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	4.0e-88
1398256:1398270	attL	CACAGGAAGGCGGCA	NA	NA	NA	NA
AXC85084.1|1399607_1401185_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA	NA
AXC85085.1|1401377_1402631_+|integrase	integrase	integrase	A0A0F6TJM5	Escherichia_coli_O157_typing_phage	90.3	2.9e-220
AXC85086.1|1402627_1402807_-	hypothetical protein	NA	T1SA82	Salmonella_phage	96.6	3.5e-23
AXC85087.1|1402803_1403451_-	adenine methylase	NA	A0A193GYV6	Enterobacter_phage	91.6	3.6e-118
1403320:1403334	attR	CACAGGAAGGCGGCA	NA	NA	NA	NA
AXC85088.1|1403443_1403743_-	perC transcriptional activator family protein	NA	T1S9J5	Salmonella_phage	86.9	1.1e-42
AXC85089.1|1403852_1404101_-	transcriptional regulator	NA	A0A193GYW1	Enterobacter_phage	95.1	2.0e-40
AXC85090.1|1404150_1405068_-	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	55.8	8.9e-70
AXC85091.1|1405064_1405886_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	94.1	9.4e-156
AXC88279.1|1405882_1406182_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	87.9	4.0e-40
AXC88280.1|1406500_1407085_-	transcriptional regulator	NA	A0A193GYL7	Enterobacter_phage	85.6	6.0e-88
AXC85092.1|1407240_1407471_+	hypothetical protein	NA	A0A193GYK6	Enterobacter_phage	93.4	6.1e-36
AXC85093.1|1407620_1407821_+	hypothetical protein	NA	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	74.2	4.3e-22
AXC85094.1|1407836_1408652_+	primosomal protein	NA	Q286X4	Escherichia_phage	86.9	4.0e-106
AXC85095.1|1408648_1409434_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	88.9	1.9e-137
AXC85096.1|1409551_1410016_+	hypothetical protein	NA	A0A193GYM2	Enterobacter_phage	93.5	3.0e-74
AXC85097.1|1410575_1410806_+	hypothetical protein	NA	Q286X0	Escherichia_phage	78.9	2.3e-27
AXC85098.1|1410802_1411204_+	chromosome partitioning protein ParB	NA	S4TTI6	Salmonella_phage	100.0	2.9e-73
AXC85099.1|1411200_1411593_+	hypothetical protein	NA	H6WRY0	Salmonella_phage	80.5	5.9e-47
AXC85100.1|1411595_1411853_+	hypothetical protein	NA	A0A192Y5W0	Salmonella_phage	100.0	1.3e-42
AXC85101.1|1411863_1412424_+	hypothetical protein	NA	E7C9P2	Salmonella_phage	57.7	8.1e-50
AXC85102.1|1412500_1412767_+	hypothetical protein	NA	A0A1V0E5L9	Salmonella_phage	96.6	1.1e-44
AXC85103.1|1412983_1413361_+	hypothetical protein	NA	NA	NA	NA	NA
AXC85104.1|1413372_1413609_+	hypothetical protein	NA	NA	NA	NA	NA
AXC85105.1|1413610_1414105_+	hypothetical protein	NA	NA	NA	NA	NA
AXC85106.1|1414088_1414382_+	hypothetical protein	NA	NA	NA	NA	NA
AXC85107.1|1414451_1414709_-	hypothetical protein	NA	NA	NA	NA	NA
AXC85108.1|1414753_1415350_+|terminase	terminase small subunit	terminase	Q858H4	Salmonella_phage	92.9	3.6e-96
AXC85109.1|1415346_1416816_+|terminase	terminase	terminase	Q858H3	Salmonella_phage	95.5	8.6e-285
AXC85110.1|1416859_1417279_-	hypothetical protein	NA	A0A2H4ZJ80	Enterobacter_phage	87.8	1.2e-16
AXC85111.1|1417820_1418027_+	hypothetical protein	NA	G9L6C1	Escherichia_phage	66.2	9.0e-07
AXC85112.1|1418041_1419712_+|tail	phage tail protein	tail	A0A193GYI4	Enterobacter_phage	97.1	4.3e-296
AXC85113.1|1419708_1420005_+	hypothetical protein	NA	A0A193GYH3	Enterobacter_phage	98.0	2.6e-47
AXC85114.1|1420007_1420718_+	peptidase	NA	G9L6C4	Escherichia_phage	91.9	8.1e-87
AXC85115.1|1420732_1421719_+	hypothetical protein	NA	G9L6C5	Escherichia_phage	89.6	8.7e-172
AXC85116.1|1421770_1422208_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	97.9	2.9e-71
AXC85117.1|1422218_1422554_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	81.1	9.4e-46
AXC85118.1|1422605_1422929_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	94.4	1.2e-50
AXC85119.1|1422928_1423534_+	hypothetical protein	NA	A0A193GYT2	Enterobacter_phage	97.0	1.7e-109
AXC85120.1|1423533_1426005_+	hypothetical protein	NA	A0A0F6TJD3	Escherichia_coli_O157_typing_phage	92.0	0.0e+00
AXC85121.1|1426004_1426469_+	hypothetical protein	NA	A0A193GYU4	Enterobacter_phage	97.4	6.7e-82
AXC85122.1|1426468_1427005_+	hypothetical protein	NA	Q858G1	Salmonella_phage	97.2	1.4e-67
AXC85123.1|1427017_1429639_+	Lytic transglycosylase, catalytic	NA	A0A193GYI3	Enterobacter_phage	37.1	1.5e-66
>prophage 3
CP029995	Salmonella enterica subsp. enterica strain SA20053897 chromosome, complete genome	4920300	2813681	2822283	4920300	transposase	Enterobacteria_phage(33.33%)	9	NA	NA
AXC86398.1|2813681_2814566_+	hypothetical protein	NA	A5LH48	Enterobacteria_phage	53.0	2.7e-76
AXC88325.1|2814780_2815440_-	DUF1076 domain-containing protein	NA	B6DZC0	Enterobacteria_phage	38.7	4.5e-31
AXC86399.1|2816710_2817169_-|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	7.7e-14
AXC88326.1|2817125_2817344_-	hypothetical protein	NA	NA	NA	NA	NA
AXC86400.1|2817364_2817532_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	88.9	1.7e-19
AXC86401.1|2817671_2818025_+	hypothetical protein	NA	NA	NA	NA	NA
AXC86402.1|2818415_2818886_-	hypothetical protein	NA	NA	NA	NA	NA
AXC86403.1|2819310_2819934_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	62.2	4.9e-72
AXC86404.1|2820240_2822283_-	type III secretion system effector E3 ubiquitin transferase SspH1	NA	Q9MBL9	Phage_Gifsy-2	46.9	9.3e-27
>prophage 4
CP029995	Salmonella enterica subsp. enterica strain SA20053897 chromosome, complete genome	4920300	3838734	3905191	4920300	bacteriocin,tRNA,protease	uncultured_Mediterranean_phage(10.0%)	59	NA	NA
AXC87289.1|3838734_3840162_-|protease	periplasmic serine endoprotease DegP	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.2	4.2e-26
AXC87290.1|3840291_3841809_-	dGTPase	NA	NA	NA	NA	NA
AXC87291.1|3841893_3842592_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
AXC87292.1|3842584_3843385_+	vitamin B12 ABC transporter substrate-binding protein BtuF	NA	NA	NA	NA	NA
AXC87293.1|3843421_3844039_+	hypothetical protein	NA	NA	NA	NA	NA
AXC87294.1|3844161_3844506_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	50.5	1.0e-26
AXC87295.1|3844587_3846009_-	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA	NA
AXC87296.1|3846178_3847459_+	glutamate-1-semialdehyde-2,1-aminomutase	NA	NA	NA	NA	NA
AXC87297.1|3847516_3849499_-	Fe(3+)-hydroxamate ABC transporter permease FhuB	NA	NA	NA	NA	NA
AXC87298.1|3849495_3850386_-	Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD	NA	NA	NA	NA	NA
AXC87299.1|3850385_3851183_-	Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	NA	G9BWD6	Planktothrix_phage	27.8	2.1e-14
AXC87300.1|3851230_3853420_-	ferrichrome porin FhuA	NA	NA	NA	NA	NA
AXC87301.1|3853712_3856232_-	bifunctional glycosyl transferase/transpeptidase	NA	NA	NA	NA	NA
AXC87302.1|3856371_3858846_-	ATP-dependent helicase HrpB	NA	A0A2H4UU36	Bodo_saltans_virus	28.4	5.6e-34
AXC87303.1|3858873_3859404_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
AXC87304.1|3859420_3860125_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
AXC87305.1|3860301_3860757_+	RNA polymerase-binding transcription factor DksA	NA	NA	NA	NA	NA
AXC88364.1|3860825_3861722_+|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
AXC87306.1|3861862_3863281_+	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	37.4	4.2e-26
AXC87307.1|3863277_3863757_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AXC87308.1|3864176_3864773_+	fimbrial protein	NA	NA	NA	NA	NA
AXC87309.1|3864912_3865650_+	fimbrial chaperone	NA	NA	NA	NA	NA
AXC87310.1|3865669_3868315_+	outer membrane usher protein	NA	NA	NA	NA	NA
AXC87311.1|3868301_3868868_+	fimbrial protein	NA	NA	NA	NA	NA
AXC87312.1|3868882_3869497_+	fimbrial protein	NA	NA	NA	NA	NA
AXC87313.1|3869509_3870091_+	fimbrial protein	NA	NA	NA	NA	NA
AXC87314.1|3870137_3871304_+	hypothetical protein	NA	NA	NA	NA	NA
AXC87315.1|3871421_3872216_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
AXC87316.1|3872227_3873082_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AXC87317.1|3873176_3873557_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AXC87318.1|3873562_3874792_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
AXC87319.1|3874853_3875294_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AXC87320.1|3875398_3876169_-	ABC transporter permease	NA	NA	NA	NA	NA
AXC87321.1|3876165_3877092_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	33.2	1.5e-21
AXC87322.1|3877200_3877863_+	carbonate dehydratase	NA	NA	NA	NA	NA
AXC87323.1|3877920_3878457_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	33.1	7.8e-18
AXC87324.1|3878662_3881053_+	membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA	NA	NA	NA	NA
AXC87325.1|3881130_3882726_-	multicopper oxidase CueO	NA	A0A0C6DWA2	Mamastrovirus	59.8	2.9e-20
AXC87326.1|3882927_3883275_+	hypothetical protein	NA	NA	NA	NA	NA
AXC87327.1|3883381_3884242_+	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
AXC87328.1|3884262_3885057_+	adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
AXC87329.1|3885086_3885854_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	35.7	2.8e-29
AXC87330.1|3885863_3886847_-	4-phospho-D-threonate 3-dehydrogenase	NA	NA	NA	NA	NA
AXC87331.1|3886836_3888108_-	D-threonate kinase	NA	NA	NA	NA	NA
AXC87332.1|3888104_3889058_-	2-keto-3-deoxygluconate permease 1	NA	NA	NA	NA	NA
AXC87333.1|3889291_3889654_-	UPF0231 family protein	NA	NA	NA	NA	NA
AXC87334.1|3889842_3892440_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
AXC87335.1|3892830_3894429_+	DUF3300 domain-containing protein	NA	NA	NA	NA	NA
AXC87336.1|3894441_3895233_+	DUF2950 domain-containing protein	NA	NA	NA	NA	NA
AXC87337.1|3895270_3895555_-	hypothetical protein	NA	NA	NA	NA	NA
AXC87338.1|3895891_3897316_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.1	1.2e-41
AXC87339.1|3897517_3899407_-	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AXC87340.1|3899421_3902085_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AXC87341.1|3902244_3903009_-	pyruvate dehydrogenase complex repressor	NA	NA	NA	NA	NA
AXC87342.1|3903460_3903751_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXC87343.1|3903820_3904111_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXC87344.1|3904180_3904471_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXC87345.1|3904540_3904831_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXC87346.1|3904900_3905191_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 5
CP029995	Salmonella enterica subsp. enterica strain SA20053897 chromosome, complete genome	4920300	4515139	4558078	4920300	tRNA,plate,tail	Burkholderia_phage(44.44%)	44	NA	NA
AXC87878.1|4515139_4516138_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AXC87879.1|4516225_4517536_-	conjugal transfer protein	NA	NA	NA	NA	NA
AXC87880.1|4517782_4518298_+	transcriptional regulator Zur	NA	NA	NA	NA	NA
AXC87881.1|4518396_4518606_-	CsbD family protein	NA	NA	NA	NA	NA
AXC87882.1|4518627_4518756_-	hypothetical protein	NA	NA	NA	NA	NA
AXC87883.1|4518737_4520063_-	MATE family efflux transporter	NA	NA	NA	NA	NA
AXC87884.1|4520241_4520850_-	LexA repressor	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
AXC87885.1|4520958_4521327_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AXC87886.1|4521497_4523918_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA	NA
AXC87887.1|4524028_4524901_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
AXC87888.1|4524914_4525412_-	chorismate lyase	NA	NA	NA	NA	NA
AXC87889.1|4525592_4526510_-	maltose operon protein MalM	NA	NA	NA	NA	NA
AXC87890.1|4526673_4528032_-	maltoporin	NA	NA	NA	NA	NA
AXC87891.1|4528119_4529229_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
AXC87892.1|4529590_4530781_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
AXC87893.1|4530967_4532512_+	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
AXC87894.1|4532526_4533417_+	maltose ABC transporter permease	NA	NA	NA	NA	NA
AXC87895.1|4533760_4535236_+	D-xylose transporter XylE	NA	NA	NA	NA	NA
AXC87896.1|4535281_4535692_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
AXC87897.1|4535833_4537930_-	YjbH domain-containing protein	NA	NA	NA	NA	NA
AXC87898.1|4537929_4538667_-	hypothetical protein	NA	NA	NA	NA	NA
AXC87899.1|4538663_4539302_-	YjbF family lipoprotein	NA	NA	NA	NA	NA
AXC87900.1|4539365_4539608_-	outer membrane protein	NA	NA	NA	NA	NA
AXC87901.1|4540051_4541701_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AXC87902.1|4542089_4543439_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
AXC87903.1|4543573_4543921_-	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
AXC87904.1|4544496_4544784_+	hypothetical protein	NA	Q6QIC8	Burkholderia_phage	50.0	1.6e-17
AXC87905.1|4544786_4545392_+	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	57.8	7.4e-57
AXC87906.1|4545404_4545719_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.1	4.9e-20
AXC87907.1|4545878_4546334_+	hypothetical protein	NA	NA	NA	NA	NA
AXC87908.1|4546330_4546528_+	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	5.1e-07
AXC87909.1|4546517_4547933_+|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	69.3	4.9e-184
AXC87910.1|4547932_4548457_+|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.0	4.0e-67
AXC87911.1|4548508_4548826_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
AXC87912.1|4548785_4548914_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
AXC87913.1|4549007_4551293_+|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	29.1	3.5e-67
AXC87914.1|4551292_4552246_+	chemotaxis protein	NA	A4JWL1	Burkholderia_virus	53.1	4.2e-38
AXC88385.1|4552245_4552455_+	hypothetical protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
AXC87915.1|4552442_4553483_+	phage protein D	NA	A4JWL3	Burkholderia_virus	45.9	3.0e-74
AXC87916.1|4553492_4554215_+|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
AXC87917.1|4554312_4554672_+|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	1.4e-34
AXC87918.1|4554662_4555778_+|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	49.9	4.3e-95
AXC87919.1|4555770_4556403_+|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	54.9	1.6e-22
AXC87920.1|4557562_4558078_+|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	35.6	6.1e-28
>prophage 1
CP029996	Salmonella enterica subsp. enterica strain SA20053897 plasmid pSA20053897.1, complete sequence	87775	0	11285	87775		Moraxella_phage(50.0%)	8	NA	NA
AXC88402.1|4414_5005_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88403.1|5123_6818_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88404.1|7434_7683_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88405.1|7685_8162_-	micrococcal nuclease	NA	A0A0R6PHV6	Moraxella_phage	39.1	1.1e-18
AXC88406.1|8394_8880_-	lytic transglycosylase	NA	NA	NA	NA	NA
AXC88407.1|8855_9470_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88408.1|9472_9892_-	oxidoreductase	NA	NA	NA	NA	NA
AXC88409.1|9977_11285_-	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	NA	H6UK37	Aeromonas_phage	45.7	1.8e-07
>prophage 2
CP029996	Salmonella enterica subsp. enterica strain SA20053897 plasmid pSA20053897.1, complete sequence	87775	31888	32974	87775		Salmonella_phage(100.0%)	1	NA	NA
AXC88429.1|31888_32974_-	DGQHR domain-containing protein	NA	T1SBJ4	Salmonella_phage	40.3	3.5e-65
>prophage 3
CP029996	Salmonella enterica subsp. enterica strain SA20053897 plasmid pSA20053897.1, complete sequence	87775	36892	37624	87775		Macacine_betaherpesvirus(100.0%)	1	NA	NA
AXC88487.1|36892_37624_+	hypothetical protein	NA	I3WFA4	Macacine_betaherpesvirus	42.9	1.6e-13
>prophage 4
CP029996	Salmonella enterica subsp. enterica strain SA20053897 plasmid pSA20053897.1, complete sequence	87775	57289	63991	87775	tRNA	Catovirus(25.0%)	10	NA	NA
AXC88455.1|57289_58681_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	27.6	6.5e-48
AXC88456.1|58867_59149_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88457.1|59145_59520_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88458.1|59558_59948_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88459.1|59978_60344_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	75.4	1.8e-45
AXC88460.1|60345_60633_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88461.1|61182_61656_+	hypothetical protein	NA	NA	NA	NA	NA
AXC88462.1|61655_62192_+	type II toxin-antitoxin system antitoxin, RelB/DinJ family	NA	NA	NA	NA	NA
AXC88463.1|62302_63562_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	55.8	4.1e-134
AXC88464.1|63571_63991_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	54.0	2.2e-31
>prophage 5
CP029996	Salmonella enterica subsp. enterica strain SA20053897 plasmid pSA20053897.1, complete sequence	87775	76012	83449	87775		Abalone_shriveling_syndrome-associated_virus(33.33%)	6	NA	NA
AXC88477.1|76012_77275_-	DNA primase	NA	B8Q5B5	Abalone_shriveling_syndrome-associated_virus	30.6	4.1e-33
AXC88478.1|77274_78294_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88479.1|78317_79454_-	conjugal transfer protein TrbA	NA	NA	NA	NA	NA
AXC88480.1|79531_81538_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	27.5	8.2e-36
AXC88481.1|81537_81927_+	hypothetical protein	NA	NA	NA	NA	NA
AXC88482.1|82384_83449_+	ParA family protein	NA	A0A0K2FLP4	Brevibacillus_phage	25.5	2.1e-14
>prophage 1
CP029998	Salmonella enterica subsp. enterica strain SA20053897 plasmid pSA20053897.3, complete sequence	61198	5711	16858	61198	transposase	Sodalis_phage(12.5%)	15	NA	NA
AXC88659.1|5711_6641_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	52.8	1.4e-75
AXC88599.1|6774_7005_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88600.1|6994_7630_-	serine recombinase	NA	A0A219Y912	Aeromonas_phage	31.7	4.2e-10
AXC88601.1|8123_8990_+	ParA family protein	NA	NA	NA	NA	NA
AXC88602.1|8989_10021_+	chromosome partitioning protein ParB	NA	S5WII0	Leptospira_phage	25.7	2.2e-08
AXC88603.1|10020_10458_+	hypothetical protein	NA	NA	NA	NA	NA
AXC88661.1|10517_10733_-	hypothetical protein	NA	NA	NA	NA	NA
AXC88604.1|10876_12151_-	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	65.2	2.7e-157
AXC88605.1|12150_12573_-	peptidase	NA	A0A1W6JNS2	Morganella_phage	53.2	3.1e-30
AXC88662.1|12752_13424_-	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.8	3.4e-79
AXC88606.1|13783_14461_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	37.4	1.9e-29
AXC88607.1|14460_14682_+	hypothetical protein	NA	NA	NA	NA	NA
AXC88608.1|14692_15112_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AXC88609.1|15166_15946_+	hypothetical protein	NA	NA	NA	NA	NA
AXC88610.1|16351_16858_+	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	31.2	1.4e-08
