assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003325335.1_ASM332533v1	CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	2	951330-952701	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,c2c9_V-U4,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	21,22,22	22	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,c2c9_V-U4,DEDDh,DinG,cas14j	NA,NA|57aa|down_2|CP030024.1_953977_954148_+,NA|73aa|down_5|CP030024.1_957952_958171_-,NA|81aa|down_7|CP030024.1_958720_958963_-	NA|179aa|up_9|CP030024.1_939876_940413_-	PRK15260, PRK15260, fimbrial protein SteF; Provisional	NA|157aa|up_8|CP030024.1_940409_940880_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|169aa|up_7|CP030024.1_940894_941401_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|258aa|up_6|CP030024.1_941420_942194_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|900aa|up_5|CP030024.1_942206_944906_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_4|CP030024.1_944985_945573_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|CP030024.1_946179_946980_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|CP030024.1_947207_948845_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|CP030024.1_948927_950226_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|CP030024.1_950361_951033_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|CP030024.1_952799_953597_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|CP030024.1_953686_954049_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|57aa|down_2|CP030024.1_953977_954148_+	NA	NA|600aa|down_3|CP030024.1_954484_956284_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_4|CP030024.1_956283_957996_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|73aa|down_5|CP030024.1_957952_958171_-	NA	NA|245aa|down_6|CP030024.1_958097_958832_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|81aa|down_7|CP030024.1_958720_958963_-	NA	NA|318aa|down_8|CP030024.1_959044_959998_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|down_9|CP030024.1_960441_963105_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]
GCA_003325335.1_ASM332533v1	CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	3	968988-970481	3,2	CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,c2c9_V-U4,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29	0	0	NA	NA	I-E:I-E	24,24	24	TypeI-E	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,c2c9_V-U4,DEDDh,DinG,cas14j	NA|81aa|up_9|CP030024.1_958720_958963_-,NA	NA|81aa|up_9|CP030024.1_958720_958963_-	NA	NA|318aa|up_8|CP030024.1_959044_959998_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|up_7|CP030024.1_960441_963105_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|520aa|up_6|CP030024.1_963116_964676_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|183aa|up_5|CP030024.1_964672_965221_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|353aa|up_4|CP030024.1_965234_966293_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|CP030024.1_966303_967050_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|CP030024.1_967031_967682_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|up_1|CP030024.1_967678_968599_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP030024.1_968598_968892_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|CP030024.1_970495_971542_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP030024.1_971792_972701_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|CP030024.1_972710_974150_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP030024.1_974136_974742_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|CP030024.1_974759_975116_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP030024.1_975306_975618_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP030024.1_975636_976347_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP030024.1_976346_976826_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP030024.1_976822_977872_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP030024.1_977852_978614_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
