The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	4755436	1316388	1336306	4755436	tail	Enterobacter_phage(53.33%)	16	NA	NA
AXE11989.1|1316388_1317855_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	6.8e-88
AXE11990.1|1317924_1319502_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
AXE11991.1|1320541_1322212_+|tail	phage tail protein	tail	A0A193GYI4	Enterobacter_phage	96.4	8.9e-294
AXE11992.1|1322208_1322505_+	hypothetical protein	NA	A0A193GYH3	Enterobacter_phage	96.9	7.5e-47
AXE11993.1|1322507_1323218_+	peptidase	NA	G9L6C4	Escherichia_phage	87.7	1.2e-77
AXE11994.1|1323230_1324217_+	hypothetical protein	NA	G9L6C5	Escherichia_phage	89.6	8.7e-172
AXE11995.1|1324268_1324706_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	95.2	1.0e-68
AXE11996.1|1324716_1325049_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	80.2	1.4e-44
AXE11997.1|1325099_1325423_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	93.5	2.7e-50
AXE11998.1|1325422_1326028_+	hypothetical protein	NA	A0A193GYT2	Enterobacter_phage	97.0	2.2e-109
AXE11999.1|1326027_1328499_+	hypothetical protein	NA	G9L6D0	Escherichia_phage	91.7	0.0e+00
AXE12000.1|1328498_1328963_+	hypothetical protein	NA	A0A193GYU4	Enterobacter_phage	96.8	4.8e-80
AXE12001.1|1328962_1329502_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	68.2	2.2e-52
AXE12002.1|1329514_1332028_+	hypothetical protein	NA	A0A193GYI3	Enterobacter_phage	94.7	0.0e+00
AXE12003.1|1332024_1333827_+	hypothetical protein	NA	A0A193GYT8	Enterobacter_phage	95.8	3.8e-298
AXE12004.1|1333831_1336306_+	hypothetical protein	NA	A0A193GZ61	Enterobacter_phage	96.6	0.0e+00
>prophage 2
CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	4755436	1340498	1345590	4755436	holin	Salmonella_phage(57.14%)	9	NA	NA
AXE12007.1|1340498_1341416_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	90.8	6.0e-159
AXE12008.1|1341412_1341775_-	GtrA family protein	NA	I1TED9	Salmonella_phage	84.2	2.5e-52
AXE12009.1|1341928_1342333_+	hypothetical protein	NA	A0A193GYV1	Enterobacter_phage	94.0	4.6e-63
AXE12010.1|1342319_1342628_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	97.1	9.9e-50
AXE12011.1|1342617_1343247_+	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	87.6	7.6e-105
AXE12012.1|1343243_1343726_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	81.2	4.2e-63
AXE12013.1|1344383_1344713_-	DUF1493 family protein	NA	NA	NA	NA	NA
AXE12014.1|1344697_1344952_-	hypothetical protein	NA	NA	NA	NA	NA
AXE12015.1|1345398_1345590_-	DUF2633 family protein	NA	G9L6F2	Escherichia_phage	84.1	6.4e-23
>prophage 3
CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	4755436	1463834	1512798	4755436	portal,terminase,coat,lysis,integrase,tail,protease	Salmonella_phage(70.15%)	74	1492067:1492083	1513080:1513096
AXE12124.1|1463834_1466507_-	DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	34.4	2.1e-58
AXE12125.1|1466503_1466887_-	hypothetical protein	NA	NA	NA	NA	NA
AXE12126.1|1466883_1467168_-	hypothetical protein	NA	NA	NA	NA	NA
AXE12127.1|1467199_1467559_-	hypothetical protein	NA	NA	NA	NA	NA
AXE15202.1|1467551_1468118_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
AXE12128.1|1468301_1468502_-	AlpA family phage regulatory protein	NA	A0A1W6JPE9	Morganella_phage	54.2	5.5e-09
AXE12129.1|1468606_1469479_-	hypothetical protein	NA	NA	NA	NA	NA
AXE12130.1|1469475_1470768_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	40.8	7.8e-72
AXE15203.1|1471044_1471248_-	hypothetical protein	NA	C6ZR24	Salmonella_phage	97.0	2.7e-32
AXE12131.1|1471343_1471694_-	hypothetical protein	NA	I6R980	Salmonella_phage	98.3	2.7e-59
AXE12132.1|1471938_1472205_-	hypothetical protein	NA	A0A1V0E5L9	Salmonella_phage	97.7	3.7e-45
AXE12133.1|1472281_1473166_-	DUF551 domain-containing protein	NA	A0A1V0E5L6	Salmonella_phage	78.1	9.4e-77
AXE12134.1|1473162_1473513_-	hypothetical protein	NA	NA	NA	NA	NA
AXE15204.1|1473512_1474301_-	ead/Ea22-like family protein	NA	I6RSM9	Salmonella_phage	77.2	8.1e-80
AXE12135.1|1474305_1474974_-	ead/Ea22-like family protein	NA	Q8HAA6	Salmonella_phage	96.6	1.8e-43
AXE12136.1|1475083_1475494_-	hypothetical protein	NA	A0A1R3Y5S0	Salmonella_virus	94.8	7.4e-69
AXE12137.1|1475490_1475661_-	DUF2737 family protein	NA	A0A220NQV6	Salmonella_phage	98.2	7.9e-25
AXE12138.1|1475671_1475965_-	DUF2856 family protein	NA	E7C9P8	Salmonella_phage	99.0	1.2e-49
AXE12139.1|1476011_1476296_-	sigma-70 family RNA polymerase sigma factor	NA	E7C9P9	Salmonella_phage	98.9	8.8e-45
AXE12140.1|1476295_1477003_-	recombinase	NA	E7C9Q0	Salmonella_phage	97.9	2.9e-137
AXE12141.1|1477011_1477200_-	hypothetical protein	NA	C6ZR38	Salmonella_phage	100.0	1.3e-28
AXE12142.1|1477196_1477310_-	host cell division inhibitory peptide Kil	NA	C6ZR39	Salmonella_phage	100.0	7.8e-13
AXE12143.1|1477302_1477464_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	E7C9Q3	Salmonella_phage	100.0	4.9e-24
AXE12144.1|1477679_1478180_-	HNH endonuclease	NA	A5H1L2	Xanthomonas_virus	44.5	5.2e-32
AXE12145.1|1478232_1478682_-	hypothetical protein	NA	I6RSN8	Salmonella_phage	92.6	1.5e-70
AXE12146.1|1478826_1479414_+	superinfection exclusion protein B	NA	A0A0M4R594	Salmonella_phage	97.4	1.2e-83
AXE12147.1|1479426_1479729_-	regulator	NA	B8K1E6	Salmonella_phage	96.0	2.4e-48
AXE12148.1|1480285_1480936_-	LexA family transcriptional repressor	NA	B1B6L9	Salmonella_phage	99.5	1.6e-121
AXE12149.1|1481016_1481202_+	hypothetical protein	NA	Q5G8T3	Enterobacteria_phage	100.0	5.4e-27
AXE12150.1|1481308_1481587_+	hypothetical protein	NA	A0A220NRS4	Escherichia_phage	93.5	2.2e-40
AXE12151.1|1481621_1481768_+	DUF2740 domain-containing protein	NA	A0A075B8K7	Enterobacteria_phage	100.0	1.5e-19
AXE12152.1|1481760_1482660_+	DNA replication protein	NA	E7C9R4	Salmonella_phage	99.3	1.4e-155
AXE12153.1|1482634_1484086_+	helicase DnaB	NA	Q7Y2K5	Escherichia_phage	99.4	4.0e-274
AXE12154.1|1484161_1484488_+	hypothetical protein	NA	Q716D0	Shigella_phage	100.0	3.3e-59
AXE12155.1|1484484_1484685_+	hypothetical protein	NA	Q716C9	Shigella_phage	98.5	1.8e-31
AXE15205.1|1484762_1484945_+	hypothetical protein	NA	A0A220NQX3	Salmonella_phage	98.3	6.9e-27
AXE12156.1|1484948_1485155_+	hypothetical protein	NA	I1TEG6	Salmonella_phage	98.5	2.7e-35
AXE12157.1|1485169_1485757_+	HNH endonuclease	NA	A0A1B1W266	Salmonella_phage	47.2	4.1e-36
AXE12158.1|1485758_1486184_+	recombination protein NinB	NA	C6ZR55	Salmonella_phage	79.3	1.5e-59
AXE12159.1|1486180_1486354_+	protein ninD	NA	C6ZR56	Salmonella_phage	100.0	5.2e-32
AXE12160.1|1486320_1486497_+	NinE family protein	NA	A0A220NRK6	Escherichia_phage	94.8	6.7e-27
AXE12161.1|1486499_1486901_+	hypothetical protein	NA	Q9EYC4	Enterobacteria_phage	84.2	1.0e-62
AXE12162.1|1486893_1487070_+	protein ninF	NA	I6S668	Salmonella_phage	93.1	4.8e-25
AXE12163.1|1487062_1487674_+	recombination protein NinG	NA	A0A2H5BFK3	Salmonella_phage	97.5	2.1e-96
AXE12164.1|1487670_1487895_+	protein ninY	NA	Q76H69	Enterobacteria_phage	100.0	6.3e-38
AXE12165.1|1487891_1488095_+	protein ninH	NA	A0A1V0E5I5	Salmonella_phage	98.5	1.2e-32
AXE12166.1|1488075_1488255_+	hypothetical protein	NA	A0A1V0E5I7	Salmonella_phage	100.0	7.1e-24
AXE12167.1|1488251_1488875_+	antitermination protein	NA	K7PM87	Enterobacteria_phage	99.0	4.4e-113
AXE15206.1|1489015_1489198_-	hypothetical protein	NA	A0A088CPS7	Enterobacteria_phage	93.2	5.0e-25
AXE12168.1|1489310_1489514_+	hypothetical protein	NA	I6R0S9	Salmonella_phage	100.0	1.1e-33
AXE15207.1|1489491_1489989_+	lysozyme	NA	I6R0P2	Salmonella_phage	99.4	1.7e-91
AXE12169.1|1490077_1490515_+|lysis	lysis protein	lysis	K7P710	Enterobacteria_phage	96.6	8.5e-71
AXE12170.1|1490718_1491249_+	KilA-N domain-containing protein	NA	B8K1H1	Salmonella_phage	95.5	3.4e-90
AXE12171.1|1491436_1491817_+	hypothetical protein	NA	Q716B1	Shigella_phage	97.6	1.0e-64
AXE12172.1|1491920_1492163_+	DUF2560 family protein	NA	A0A0N7CDV1	Salmonella_phage	100.0	1.3e-36
1492067:1492083	attL	CCAGTCAGGCGGCGCTA	NA	NA	NA	NA
AXE12173.1|1492165_1492570_+	Decoration protein	NA	C6ZR73	Salmonella_phage	100.0	3.1e-67
AXE12174.1|1492573_1493062_+	DNA-packaging protein	NA	A8CGG1	Salmonella_phage	100.0	2.9e-88
AXE12175.1|1493039_1494539_+|terminase	terminase	terminase	A0A0M4S5Z3	Salmonella_phage	99.6	3.1e-306
AXE12176.1|1494538_1496716_+|portal	portal protein	portal	Q5C835	Enterobacteria_phage	99.6	0.0e+00
AXE12177.1|1496729_1497641_+	scaffolding protein	NA	A0A192Y6T4	Salmonella_phage	100.0	4.9e-161
AXE12178.1|1497640_1498933_+|coat	coat protein	coat	C6ZR10	Salmonella_phage	99.3	3.2e-243
AXE12179.1|1498973_1499534_+	hypothetical protein	NA	I6S1J7	Salmonella_phage	98.4	7.0e-102
AXE12180.1|1499517_1500018_+	hypothetical protein	NA	I1TEJ0	Salmonella_phage	98.8	5.5e-90
AXE12181.1|1499977_1501396_+	hypothetical protein	NA	I1TEJ1	Salmonella_phage	98.9	1.5e-273
AXE12182.1|1501399_1502038_+|tail	phage tail protein	tail	A0A088CPT1	Enterobacteria_phage	98.1	6.5e-88
AXE12183.1|1502037_1502493_+	DUF2824 family protein	NA	I6R0L6	Salmonella_phage	98.7	1.5e-86
AXE12184.1|1502495_1503185_+	DNA transfer protein	NA	B9UDK9	Salmonella_phage	93.4	4.3e-93
AXE15208.1|1503227_1504544_+	DNA transfer protein	NA	B9UDL0	Salmonella_phage	98.6	2.1e-237
AXE12185.1|1504540_1506361_+	DNA transfer protein	NA	A0A2H4FNB8	Salmonella_phage	93.3	4.1e-276
AXE12186.1|1506945_1508733_+	hypothetical protein	NA	I6S5Y0	Salmonella_phage	87.5	6.8e-58
AXE12187.1|1508764_1510219_-	hypothetical protein	NA	NA	NA	NA	NA
AXE12188.1|1510208_1511135_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	92.8	2.2e-161
AXE12189.1|1511131_1511494_-	GtrA family protein	NA	I1TED9	Salmonella_phage	82.5	6.2e-51
AXE12190.1|1511628_1512798_-|integrase	integrase	integrase	I6R0M2	Salmonella_phage	99.2	1.7e-227
1513080:1513096	attR	TAGCGCCGCCTGACTGG	NA	NA	NA	NA
>prophage 4
CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	4755436	1752258	1761429	4755436	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AXE12415.1|1752258_1753206_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
AXE12416.1|1753189_1753921_+	ABC transporter permease	NA	NA	NA	NA	NA
AXE12417.1|1753901_1754009_-	hypothetical protein	NA	NA	NA	NA	NA
AXE12418.1|1754068_1754800_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AXE12419.1|1755022_1756708_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
AXE12420.1|1756704_1757424_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXE12421.1|1757470_1757938_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AXE12422.1|1757994_1758525_-	DUF1307 domain-containing protein	NA	NA	NA	NA	NA
AXE12423.1|1758696_1759155_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AXE12424.1|1759395_1761429_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 5
CP030024	Salmonella enterica subsp. enterica strain SA20120345 chromosome, complete genome	4755436	1926557	1937945	4755436		Enterobacteria_phage(25.0%)	12	NA	NA
AXE12567.1|1926557_1927820_-	DUF4102 domain-containing protein	NA	Q7M297	Enterobacteria_phage	36.8	3.0e-68
AXE12568.1|1928467_1928758_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	49.1	3.0e-08
AXE12569.1|1929129_1929927_-	protein MtfA	NA	NA	NA	NA	NA
AXE12570.1|1930407_1930569_+	hypothetical protein	NA	NA	NA	NA	NA
AXE12571.1|1930695_1931115_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	3.8e-36
AXE12572.1|1931117_1932386_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	92.7	3.8e-228
AXE12573.1|1932840_1933053_+	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
AXE15227.1|1933063_1933252_+	cold-shock protein	NA	NA	NA	NA	NA
AXE12574.1|1933511_1934705_-	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	57.3	7.9e-111
AXE12575.1|1935354_1935666_+	hypothetical protein	NA	NA	NA	NA	NA
AXE12576.1|1935745_1936441_+	phosphohydrolase	NA	S4W232	Pandoravirus	27.5	2.8e-07
AXE12577.1|1936514_1937945_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
