assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003330825.1_ASM333082v1	CP024941	Paraburkholderia terricola strain mHS1 chromosome mHS1_A, complete sequence	1	2342461-2342547	1	CRISPRCasFinder	no		RT,cas3,PD-DExK,WYL,DinG,csa3,DEDDh	Orphan	AGCGCTTACTCCAACCCCATGCAACAT	27	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,PD-DExK,WYL,DinG,csa3,DEDDh	NA,NA	NA|311aa|up_9|CP024941.1_2331581_2332514_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|154aa|up_8|CP024941.1_2332561_2333023_-	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|802aa|up_7|CP024941.1_2333193_2335599_-	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|272aa|up_6|CP024941.1_2336126_2336942_+	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA|262aa|up_5|CP024941.1_2336987_2337773_-	cd18095, SpoU-like_rRNA-MTase, SAM-dependent rRNA methylase related to SpoU-TrmH	NA|254aa|up_4|CP024941.1_2337841_2338603_-	PRK00015, rnhB, ribonuclease HII; Validated	NA|390aa|up_3|CP024941.1_2338599_2339769_-	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|263aa|up_2|CP024941.1_2339772_2340561_-	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|155aa|up_1|CP024941.1_2340659_2341124_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|371aa|up_0|CP024941.1_2341308_2342421_-	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|170aa|down_0|CP024941.1_2342617_2343127_-	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|771aa|down_1|CP024941.1_2343214_2345527_-	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein	NA|464aa|down_2|CP024941.1_2345594_2346986_-	PRK10779, PRK10779, sigma E protease regulator RseP	NA|402aa|down_3|CP024941.1_2346993_2348199_-	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional	NA|274aa|down_4|CP024941.1_2348209_2349031_-	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|261aa|down_5|CP024941.1_2349024_2349807_-	PRK14836, PRK14836, undecaprenyl pyrophosphate synthase; Provisional	NA|187aa|down_6|CP024941.1_2349871_2350432_-	PRK00083, frr, ribosome recycling factor; Reviewed	NA|238aa|down_7|CP024941.1_2350532_2351246_-	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway)	NA|294aa|down_8|CP024941.1_2351466_2352348_-	PRK09377, tsf, elongation factor Ts; Provisional	NA|251aa|down_9|CP024941.1_2352563_2353316_-	PRK05299, rpsB, 30S ribosomal protein S2; Provisional
GCA_003330825.1_ASM333082v1	CP024942	Paraburkholderia terricola strain mHS1 chromosome mHS1_B, complete sequence	1	1167585-1167756	1	CRISPRCasFinder	no		PD-DExK,RT,csa3,cas3,DinG	Orphan	CGAAAGGTGAGGGTTTTCGGGAGC	24	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,PD-DExK,WYL,DinG,csa3,DEDDh	NA|173aa|up_7|CP024942.1_1158250_1158769_+,NA|183aa|up_1|CP024942.1_1166314_1166863_+,NA	NA|217aa|up_9|CP024942.1_1156090_1156741_-	pfam04264, YceI, YceI-like domain	NA|160aa|up_8|CP024942.1_1157545_1158025_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|173aa|up_7|CP024942.1_1158250_1158769_+	NA	NA|63aa|up_6|CP024942.1_1159964_1160153_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|232aa|up_5|CP024942.1_1160380_1161076_+	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats	NA|591aa|up_4|CP024942.1_1161097_1162870_-	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium	NA|797aa|up_3|CP024942.1_1163147_1165538_+	cd16916, HATPase_CheA-like, Histidine kinase-like ATPase domain of the chemotaxis protein histidine kinase CheA, and some hybrid sensor histidine kinases	NA|241aa|up_2|CP024942.1_1165583_1166306_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|183aa|up_1|CP024942.1_1166314_1166863_+	NA	NA|122aa|up_0|CP024942.1_1166883_1167249_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|253aa|down_0|CP024942.1_1167881_1168640_-	PRK07023, PRK07023, SDR family oxidoreductase	NA|317aa|down_1|CP024942.1_1168844_1169795_+	cd08421, PBP2_LTTR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|398aa|down_2|CP024942.1_1169900_1171094_+	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|314aa|down_3|CP024942.1_1171123_1172065_+	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain	NA|444aa|down_4|CP024942.1_1172123_1173455_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|242aa|down_5|CP024942.1_1173908_1174634_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|407aa|down_6|CP024942.1_1174796_1176017_+	PLN02409, PLN02409, serine--glyoxylate aminotransaminase	NA|429aa|down_7|CP024942.1_1176268_1177555_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|250aa|down_8|CP024942.1_1177590_1178340_+	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1011aa|down_9|CP024942.1_1178363_1181396_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]
GCA_003330825.1_ASM333082v1	CP024942	Paraburkholderia terricola strain mHS1 chromosome mHS1_B, complete sequence	2	2115249-2115372	2	CRISPRCasFinder	no		PD-DExK,RT,csa3,cas3,DinG	Orphan	AGTACGCGCCGGGCAGCCCCAAGCGTGCTGACGCCCCCTCGGGGGG	46	1	1	2115295-2115326	CP024942.1_2115374-2115405	NA	1	1	Orphan	RT,cas3,PD-DExK,WYL,DinG,csa3,DEDDh	NA,NA|136aa|down_3|CP024942.1_2119412_2119820_-	NA|25aa|up_9|CP024942.1_2103987_2104062_-	PRK00284, pqqA, pyrroloquinoline quinone precursor peptide PqqA	NA|506aa|up_8|CP024942.1_2104529_2106047_+	cd08212, RuBisCO_large_I, Ribulose bisphosphate carboxylase large chain, Form I	NA|143aa|up_7|CP024942.1_2106158_2106587_+	CHL00130, rbcS, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit; Reviewed	NA|318aa|up_6|CP024942.1_2106763_2107717_+	TIGR02880, Protein_CbxX_chromosomal, probable Rubsico expression protein CbbX	NA|368aa|up_5|CP024942.1_2107744_2108848_+	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|291aa|up_4|CP024942.1_2108952_2109825_+	PRK15453, PRK15453, phosphoribulokinase; Provisional	NA|682aa|up_3|CP024942.1_2109889_2111935_+	PRK12753, PRK12753, transketolase; Reviewed	NA|346aa|up_2|CP024942.1_2111970_2113008_+	PRK09196, PRK09196, fructose-bisphosphate aldolase class II	NA|244aa|up_1|CP024942.1_2113031_2113763_+	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|461aa|up_0|CP024942.1_2113853_2115236_-	TIGR00284, Uncharacterized_protein_MJ0107, dihydropteroate synthase-related protein	NA|193aa|down_0|CP024942.1_2115402_2115981_-	COG1036, COG1036, Archaeal flavoproteins [Energy production and conversion]	NA|706aa|down_1|CP024942.1_2115977_2118095_-	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|183aa|down_2|CP024942.1_2118560_2119109_+	smart00905, FolB, Dihydroneopterin aldolase	NA|136aa|down_3|CP024942.1_2119412_2119820_-	NA	NA|170aa|down_4|CP024942.1_2119906_2120416_-	pfam08714, Fae, Formaldehyde-activating enzyme (Fae)	NA|317aa|down_5|CP024942.1_2120514_2121465_-	pfam01874, CitG, ATP:dephospho-CoA triphosphoribosyl transferase	NA|342aa|down_6|CP024942.1_2121457_2122483_-	TIGR00768, Tetrahydromethanopterin:alpha-L-glutamate_ligase, alpha-L-glutamate ligase, RimK family	NA|345aa|down_7|CP024942.1_2122479_2123514_-	PRK02264, PRK02264, N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; Provisional	NA|402aa|down_8|CP024942.1_2123488_2124694_-	COG2232, COG2232, Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only]	NA|313aa|down_9|CP024942.1_2124735_2125674_-	pfam09176, Mpt_N, Methylene-tetrahydromethanopterin dehydrogenase, N-terminal
GCA_003330825.1_ASM333082v1	CP024942	Paraburkholderia terricola strain mHS1 chromosome mHS1_B, complete sequence	3	2690675-2690748	3	CRISPRCasFinder	no		PD-DExK,RT,csa3,cas3,DinG	Orphan	AGTAAGCGCTGAAGCGCTAACTCC	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,PD-DExK,WYL,DinG,csa3,DEDDh	NA,NA	NA|245aa|up_9|CP024942.1_2676156_2676891_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|197aa|up_8|CP024942.1_2676900_2677491_+	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|532aa|up_7|CP024942.1_2677536_2679132_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|348aa|up_6|CP024942.1_2679262_2680306_-	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|399aa|up_5|CP024942.1_2680592_2681789_+	COG5653, COG5653, Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]	NA|406aa|up_4|CP024942.1_2682311_2683529_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|724aa|up_3|CP024942.1_2683686_2685858_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|663aa|up_2|CP024942.1_2686053_2688042_-	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|361aa|up_1|CP024942.1_2688492_2689575_+	COG3199, COG3199, Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]	NA|328aa|up_0|CP024942.1_2689624_2690608_+	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|335aa|down_0|CP024942.1_2690766_2691771_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|371aa|down_1|CP024942.1_2691774_2692887_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|332aa|down_2|CP024942.1_2692889_2693885_+	PRK12928, PRK12928, lipoyl synthase; Provisional	NA|809aa|down_3|CP024942.1_2693909_2696336_-	pfam01804, Penicil_amidase, Penicillin amidase	NA|337aa|down_4|CP024942.1_2696758_2697769_+	COG0274, DeoC, Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]	NA|796aa|down_5|CP024942.1_2697785_2700173_+	cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like	NA|321aa|down_6|CP024942.1_2700296_2701259_+	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|346aa|down_7|CP024942.1_2701326_2702364_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|335aa|down_8|CP024942.1_2702474_2703479_+	cd20001, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein	NA|518aa|down_9|CP024942.1_2703552_2705106_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
