The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031133	Bifidobacterium longum subsp. longum strain BORI chromosome, complete genome	2311020	1412673	1489994	2311020	tRNA,integrase,transposase	Catovirus(16.67%)	55	1451473:1451488	1495960:1495975
AXF98760.1|1412673_1413162_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
AXF98761.1|1413251_1413938_-	VWA domain-containing protein	NA	A0A292GAU5	Xanthomonas_phage	37.8	3.7e-28
AXF98762.1|1414081_1415185_-	macro domain-containing protein	NA	F1SVT2	Red_sea_bream_iridovirus	41.1	9.4e-26
AXF98763.1|1415925_1416855_-	cell division protein FtsQ	NA	NA	NA	NA	NA
AXF98764.1|1416989_1418528_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AXF98765.1|1418628_1419810_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AXF98766.1|1419825_1421043_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AXF98767.1|1421029_1422511_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AXF98768.1|1422529_1423636_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AXF98769.1|1423680_1425132_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
AXF98770.1|1425180_1426053_-	hypothetical protein	NA	NA	NA	NA	NA
AXF98771.1|1426079_1427882_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
AXF98772.1|1427878_1428328_-	hypothetical protein	NA	NA	NA	NA	NA
AXF98773.1|1428334_1429414_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
AXF98774.1|1429413_1429935_-	transcriptional regulator MraZ	NA	NA	NA	NA	NA
AXF98775.1|1430267_1432547_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
AXF98776.1|1432557_1433757_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	44.3	4.0e-94
AXF99461.1|1433889_1434330_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
AXF98777.1|1434382_1434733_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AXF98778.1|1434883_1435609_+	LexA repressor	NA	A0A2K9V3G4	Faecalibacterium_phage	38.3	2.4e-14
AXF98779.1|1435774_1436713_+	cation transporter	NA	NA	NA	NA	NA
AXF98780.1|1436854_1437817_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
AXF98781.1|1437997_1439503_-	GTPase HflX	NA	NA	NA	NA	NA
AXF99462.1|1439499_1439739_-	hypothetical protein	NA	NA	NA	NA	NA
AXF98782.1|1439661_1440318_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
AXF98783.1|1440307_1444444_+	DUF3418 domain-containing protein	NA	A0A1V0SBU4	Catovirus	27.4	8.1e-46
AXF98784.1|1444440_1445412_+	hemagglutinin	NA	NA	NA	NA	NA
AXF98785.1|1445737_1447075_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AXF98786.1|1447223_1448657_+	DUF2252 domain-containing protein	NA	NA	NA	NA	NA
AXF98787.1|1448760_1449486_-	bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase PriA	NA	NA	NA	NA	NA
AXF98788.1|1449555_1450203_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
AXF98789.1|1450237_1451032_-	hypothetical protein	NA	NA	NA	NA	NA
AXF98790.1|1451031_1451631_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
1451473:1451488	attL	GGTCAGGTCGATCAGC	NA	NA	NA	NA
AXF98791.1|1451716_1452877_-	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
AXF99463.1|1452873_1454256_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
AXF99464.1|1454678_1456130_-	gluconate kinase	NA	NA	NA	NA	NA
AXF98792.1|1456261_1457089_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.7	4.1e-58
AXF98793.1|1463209_1463710_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXF98794.1|1465877_1466312_-	DUF4186 domain-containing protein	NA	NA	NA	NA	NA
AXF98795.1|1466400_1469970_-	DNA polymerase III subunit alpha	NA	A0A0K1Y9G6	Streptomyces_phage	51.1	0.0e+00
AXF98796.1|1470556_1470877_+	hypothetical protein	NA	NA	NA	NA	NA
AXF98797.1|1471118_1471316_-	hypothetical protein	NA	NA	NA	NA	NA
AXF98798.1|1472012_1473863_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
AXF98799.1|1474144_1474990_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
AXF99465.1|1475324_1476341_+|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	30.0	1.5e-09
AXF98800.1|1476471_1477674_+|integrase	integrase	integrase	NA	NA	NA	NA
AXF98801.1|1478633_1479689_+|integrase	integrase	integrase	A0A0U4IH55	Gordonia_phage	26.7	1.0e-05
AXF98802.1|1480223_1480985_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	38.5	4.2e-33
AXF98803.1|1482019_1482805_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	39.2	6.7e-34
AXF98804.1|1482801_1484304_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
AXF98805.1|1485180_1487100_-	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	NA	E4ZFJ7	Streptococcus_phage	99.2	0.0e+00
AXF98806.1|1487462_1487666_-	hypothetical protein	NA	NA	NA	NA	NA
AXF98807.1|1487806_1488853_+	WYL domain-containing protein	NA	NA	NA	NA	NA
AXF98808.1|1488880_1489747_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
AXF98809.1|1489874_1489994_-|integrase	integrase	integrase	NA	NA	NA	NA
1495960:1495975	attR	GCTGATCGACCTGACC	NA	NA	NA	NA
>prophage 2
CP031133	Bifidobacterium longum subsp. longum strain BORI chromosome, complete genome	2311020	2275092	2285017	2311020		Mycobacterium_phage(33.33%)	10	NA	NA
AXF99362.1|2275092_2276220_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	33.8	2.9e-22
AXF99512.1|2276578_2277739_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AXF99363.1|2277817_2278810_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	77.6	4.7e-141
AXF99364.1|2279120_2281316_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	47.3	2.1e-186
AXF99513.1|2281431_2281839_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	30.8	1.0e-09
AXF99365.1|2281886_2282201_-	glutaredoxin family protein	NA	V5R9U9	Mycobacterium_phage	41.8	6.0e-10
AXF99366.1|2282301_2282544_+	hypothetical protein	NA	NA	NA	NA	NA
AXF99514.1|2282740_2283364_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXF99367.1|2283371_2284055_-	DUF3990 domain-containing protein	NA	NA	NA	NA	NA
AXF99368.1|2284249_2285017_+	two pore domain potassium channel family protein	NA	A0A2I7SA68	Vibrio_phage	27.3	3.7e-05
