The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	52470	58311	2892914		Streptococcus_phage(75.0%)	8	NA	NA
AXJ79544.1|52470_53145_+	Integrase core domain protein	NA	A0A0N9SKD3	Staphylococcus_phage	100.0	6.2e-129
AXJ79545.1|53186_53549_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	A0A1B0RXM1	Streptococcus_phage	100.0	1.2e-57
AXJ79546.1|53824_54619_-	Aminoglycoside 3'-phosphotransferase	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
AXJ79547.1|54711_55254_-	TDP-fucosamine acetyltransferase	NA	A0A1B0RXL7	Streptococcus_phage	99.4	2.0e-93
AXJ79548.1|55250_56159_-	Aminoglycoside 6-adenylyltransferase	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
AXJ79549.1|56191_56926_-	putative methyltransferase YcgJ	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
AXJ79550.1|56906_57590_-	hypothetical protein	NA	A0A1X9I6C9	Streptococcus_phage	99.1	4.1e-128
AXJ79551.1|57636_58311_-	Integrase core domain protein	NA	A0A0N9RU54	Staphylococcus_phage	99.1	2.0e-127
>prophage 2
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	753421	761241	2892914		Hokovirus(16.67%)	10	NA	NA
AXJ80166.1|753421_754477_-	Histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
AXJ80167.1|754476_755163_-	Response regulator SaeR	NA	NA	NA	NA	NA
AXJ80168.1|755137_755611_-	DoxX	NA	NA	NA	NA	NA
AXJ80169.1|755952_756393_-	Electron transfer DM13	NA	NA	NA	NA	NA
AXJ80170.1|756672_757257_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80171.1|757355_758069_-	7-carboxy-7-deazaguanine synthase	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AXJ80172.1|758072_758492_-	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
AXJ80173.1|758493_759162_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AXJ80174.1|759512_760106_+	Anthranilate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AXJ80175.1|760089_761241_+	Aminodeoxychorismate synthase component 1	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 3
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	773213	787944	2892914		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AXJ80184.1|773213_774272_+	Histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AXJ80185.1|774622_775165_+	Putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AXJ80186.1|775788_776706_-	Putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
AXJ80187.1|776975_778481_-	Di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AXJ80188.1|778821_779322_-	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AXJ80189.1|779341_780208_-	EamA-like transporter family protein	NA	NA	NA	NA	NA
AXJ80190.1|781008_781407_+	ribonucleotide reductase stimulatory protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AXJ80191.1|781369_783475_+	Ribonucleoside-diphosphate reductase subunit alpha 2	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AXJ80192.1|783592_784564_+	Ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AXJ80193.1|785229_786243_+	Fe(3+) dicitrate transport system permease protein FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
AXJ80194.1|786229_787186_+	Iron-uptake system permease protein FeuC	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AXJ80195.1|787182_787944_+	putative siderophore transport system ATP-binding protein YusV	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 4
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	867874	889083	2892914		Staphylococcus_phage(77.78%)	33	NA	NA
AXJ80273.1|867874_868900_+	Methionine import ATP-binding protein MetN 2	NA	G9BWD6	Planktothrix_phage	36.8	1.2e-27
AXJ80274.1|868892_869588_+	Methionine import system permease protein MetP	NA	NA	NA	NA	NA
AXJ80275.1|869605_870427_+	Methionine-binding lipoprotein MetQ precursor	NA	NA	NA	NA	NA
AXJ80276.1|870569_871790_-	Transposase	NA	Q4ZE80	Staphylococcus_phage	47.5	6.4e-100
AXJ80277.1|871878_872607_-	Enterotoxin type A precursor	NA	A0EX09	Staphylococcus_phage	32.3	1.9e-22
AXJ80278.1|872910_873360_-	Enterotoxin type E precursor	NA	A0EX09	Staphylococcus_phage	32.8	7.3e-09
AXJ80279.1|873429_873861_-	hypothetical protein	NA	Q4ZCB6	Staphylococcus_virus	56.0	5.1e-36
AXJ80280.1|873877_874336_-	hypothetical protein	NA	A0A0H4J322	Staphylococcus_phage	83.0	5.1e-66
AXJ80281.1|874347_874680_-	helix-turn-helix protein	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
AXJ80282.1|874872_875112_+	helix-turn-helix protein	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	88.6	1.7e-33
AXJ80283.1|875127_875400_+	hypothetical protein	NA	Q4ZE77	Staphylococcus_phage	90.0	9.7e-41
AXJ80284.1|875411_875558_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ80285.1|875550_875760_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
AXJ80286.1|875762_876083_+	hypothetical protein	NA	Q4ZE75	Staphylococcus_phage	51.9	1.3e-20
AXJ80287.1|876146_877016_+	hypothetical protein	NA	A0A1W6JQL5	Staphylococcus_phage	92.7	3.4e-156
AXJ80288.1|877032_878490_+	Virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	96.1	1.0e-277
AXJ80289.1|878790_879153_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
AXJ80290.1|879154_879439_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
AXJ80291.1|879435_880077_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.5	1.5e-108
AXJ80292.1|880593_880935_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
AXJ80293.1|880946_881525_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
AXJ80294.1|881542_881761_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ80295.1|881811_882339_+	hypothetical protein	NA	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
AXJ80296.1|882341_882683_+	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	98.2	1.4e-57
AXJ80297.1|882679_883249_+	Terminase small subunit	NA	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
AXJ80298.1|883556_884357_+	Enterotoxin type B precursor	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
AXJ80299.1|884434_884992_-	hypothetical protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
AXJ80300.1|885388_885517_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	1.1e-15
AXJ80301.1|885587_885698_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	94.4	2.4e-11
AXJ80302.1|885699_885885_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
AXJ80303.1|886715_886910_+	CsbD-like protein	NA	NA	NA	NA	NA
AXJ80304.1|887142_887994_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80305.1|888321_889083_+	YurY	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 5
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	1505267	1593674	2892914	head,terminase,protease,tRNA,capsid,tail,lysis,holin,portal	Staphylococcus_phage(78.67%)	102	NA	NA
AXJ80841.1|1505267_1506560_-|tRNA	Asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
AXJ80842.1|1506881_1509575_-	hypothetical protein	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
AXJ80843.1|1509598_1510570_-	Bifunctional ligase/repressor BirA	NA	NA	NA	NA	NA
AXJ80844.1|1510556_1511759_-	CCA-adding enzyme	NA	H7BUW3	unidentified_phage	42.5	3.2e-35
AXJ80845.1|1511763_1512906_-	GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase	NA	NA	NA	NA	NA
AXJ80846.1|1513146_1513464_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
AXJ80847.1|1513800_1514499_-	Putative neutral zinc metallopeptidase	NA	NA	NA	NA	NA
AXJ80848.1|1514552_1515140_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80849.1|1515129_1515717_-	hypothetical protein	NA	G3MAV7	Bacillus_virus	27.2	2.8e-08
AXJ80850.1|1515718_1516963_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXJ80851.1|1516969_1518268_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AXJ80852.1|1518277_1519342_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AXJ80853.1|1519367_1520534_-	Chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
AXJ80854.1|1520919_1521120_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80855.1|1521328_1521778_-	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AXJ80856.1|1521869_1522829_-	Heptaprenyl diphosphate synthase component 2	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AXJ80857.1|1522830_1523556_-	Demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AXJ80858.1|1523558_1524131_-	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1	NA	NA	NA	NA	NA
AXJ80859.1|1524561_1524834_-	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AXJ80860.1|1525004_1526003_-	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	NA	NA	NA	NA	NA
AXJ80861.1|1526019_1527330_-	GTPase Der	NA	NA	NA	NA	NA
AXJ80862.1|1527551_1528727_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AXJ80863.1|1529438_1530098_-	Cytidylate kinase	NA	NA	NA	NA	NA
AXJ80864.1|1530174_1531143_+	putative L-asparaginase	NA	NA	NA	NA	NA
AXJ80865.1|1531257_1532244_-	Glucosaminate ammonia-lyase	NA	NA	NA	NA	NA
AXJ80866.1|1532645_1534106_-	Elastin-binding protein EbpS	NA	NA	NA	NA	NA
AXJ80867.1|1534258_1535638_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
AXJ80868.1|1535627_1536581_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80869.1|1536688_1536937_+	Ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AXJ80870.1|1537042_1537588_-	Riboflavin transporter RibU	NA	NA	NA	NA	NA
AXJ80871.1|1538184_1539099_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80872.1|1539113_1539320_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80873.1|1539312_1540191_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80874.1|1540308_1541226_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80875.1|1541316_1541664_-	hypothetical protein	NA	Q4ZCJ7	Staphylococcus_virus	100.0	3.0e-26
AXJ80876.1|1541714_1542398_-	hypothetical protein	NA	A0A0A7S0U2	Clostridium_phage	28.3	1.1e-13
AXJ80877.1|1542394_1542718_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80878.1|1542674_1543724_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80879.1|1544342_1545797_-	putative cell wall hydrolase LytN precursor	NA	I1W626	Staphylococcus_phage	99.0	4.1e-287
AXJ80880.1|1545807_1546110_-|holin,lysis	Phage lysis protein, holin	holin,lysis	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
AXJ80881.1|1546245_1546545_-	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ80882.1|1546590_1546755_-	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ80883.1|1546747_1547137_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ80884.1|1547136_1548603_-	hypothetical protein	NA	A0A2I6PDE3	Staphylococcus_phage	94.3	2.0e-257
AXJ80885.1|1548602_1550513_-	hypothetical protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AXJ80886.1|1550528_1550819_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AXJ80887.1|1550818_1552402_-|tail	Prophage endopeptidase tail	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXJ80888.1|1552410_1553235_-|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AXJ80889.1|1553234_1559435_-	Glycyl-glycine endopeptidase ALE-1 precursor	NA	U5U762	Staphylococcus_phage	99.8	0.0e+00
AXJ80890.1|1559448_1559607_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ80891.1|1559648_1559999_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AXJ80892.1|1560056_1560512_-	Bacterial Ig-like domain (group 2)	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
AXJ80893.1|1560603_1561245_-|tail	Phage major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AXJ80894.1|1561279_1561675_-	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ80895.1|1561675_1562077_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ80896.1|1562073_1562406_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ80897.1|1562417_1562696_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AXJ80898.1|1562764_1563928_-|capsid	Phage capsid family protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
AXJ80899.1|1563939_1564713_-|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	M1TAZ4	Staphylococcus_phage	99.6	2.7e-136
AXJ80900.1|1564696_1565935_-|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	100.0	6.9e-235
AXJ80901.1|1565939_1567631_-	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	99.6	0.0e+00
AXJ80902.1|1567620_1567926_-|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ80903.1|1568054_1568369_-	HNH endonuclease	NA	Q4ZCU3	Staphylococcus_virus	100.0	2.5e-56
AXJ80904.1|1568525_1568963_-	hypothetical protein	NA	A0A2I6PEB8	Staphylococcus_phage	100.0	1.0e-76
AXJ80905.1|1568975_1570334_-	hypothetical protein	NA	A0A0K1LKG3	Staphylococcus_phage	98.7	1.2e-259
AXJ80906.1|1570323_1570614_-	VRR-NUC domain protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
AXJ80907.1|1570954_1573402_-	Virulence-associated protein E	NA	B5WZN5	Staphylococcus_phage	99.9	0.0e+00
AXJ80908.1|1573454_1573655_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ80909.1|1573722_1573878_-	Transcriptional activator RinB	NA	B5WZN3	Staphylococcus_phage	100.0	1.2e-19
AXJ80910.1|1573867_1574104_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
AXJ80911.1|1574128_1574365_-	hypothetical protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
AXJ80912.1|1574401_1574938_-	dUTPase	NA	S4V978	Staphylococcus_phage	98.9	1.0e-94
AXJ80913.1|1574930_1575113_-	hypothetical protein	NA	D2JGL7	Staphylococcus_phage	100.0	2.6e-26
AXJ80914.1|1575102_1575357_-	hypothetical protein	NA	W5R8J0	Staphylococcus_phage	100.0	5.0e-39
AXJ80915.1|1575368_1575611_-	hypothetical protein	NA	A0A2D1G5G2	Staphylococcus_phage	98.8	5.6e-40
AXJ80916.1|1575625_1575826_-	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
AXJ80917.1|1575828_1576086_-	hypothetical protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
AXJ80918.1|1576085_1576487_-	PVL ORF-50-like family protein	NA	A0A2I6PEL5	Staphylococcus_phage	99.2	2.3e-67
AXJ80919.1|1576486_1576672_-	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AXJ80920.1|1576684_1578646_-	DNA polymerase I, thermostable	NA	A0A2I6PE86	Staphylococcus_phage	100.0	0.0e+00
AXJ80921.1|1578704_1579262_-	hypothetical protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
AXJ80922.1|1579287_1580454_-	PD-(D/E)XK nuclease superfamily protein	NA	A0A0K1LKE3	Staphylococcus_phage	99.7	1.6e-220
AXJ80923.1|1580450_1580813_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	99.2	2.4e-55
AXJ80924.1|1580827_1581151_-	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
AXJ80925.1|1581229_1581391_-	hypothetical protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
AXJ80926.1|1581403_1581667_-	hypothetical protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
AXJ80927.1|1581691_1581907_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	97.2	2.7e-30
AXJ80928.1|1581961_1582327_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AXJ80929.1|1582295_1582541_-	hypothetical protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AXJ80930.1|1582590_1582809_-	hypothetical protein	NA	B5WZL5	Staphylococcus_phage	100.0	7.8e-33
AXJ80931.1|1582824_1583601_-	hypothetical protein	NA	M1RZB2	Staphylococcus_phage	100.0	1.5e-142
AXJ80932.1|1583626_1583854_-	hypothetical protein	NA	B5WZL3	Staphylococcus_phage	100.0	3.3e-34
AXJ80933.1|1584025_1584640_+	LexA repressor	NA	B5WZL2	Staphylococcus_phage	100.0	9.0e-111
AXJ80934.1|1584655_1585576_+	DNA polymerase III PolC-type	NA	B5WZL1	Staphylococcus_phage	100.0	2.5e-173
AXJ80935.1|1585672_1585855_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
AXJ80936.1|1585912_1586038_+	hypothetical protein	NA	Q4ZCR4	Staphylococcus_virus	97.6	1.6e-11
AXJ80937.1|1586034_1586649_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	99.5	2.5e-105
AXJ80938.1|1586774_1587980_+	Transposase	NA	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AXJ80939.1|1588022_1590050_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.2	2.0e-114
AXJ80940.1|1590042_1590972_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ80941.1|1591216_1592968_-	Sensor protein SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
AXJ80942.1|1592948_1593674_-	Transcriptional regulatory protein SrrA	NA	W8CYM9	Bacillus_phage	43.0	4.6e-45
>prophage 6
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	1650130	1658442	2892914	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AXJ81005.1|1650130_1650916_-	High-affinity zinc uptake system ATP-binding protein ZnuC	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AXJ81006.1|1651041_1651932_-	putative endonuclease 4	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AXJ81007.1|1651941_1653288_-	DEAD-box ATP-dependent RNA helicase CshB	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
AXJ81008.1|1653401_1654502_-	Putative GTP cyclohydrolase 1 type 2	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AXJ81009.1|1654504_1655182_-|tRNA	tRNA (adenine(22)-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AXJ81010.1|1655312_1656419_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AXJ81011.1|1656642_1658442_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 7
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	1727501	1736544	2892914	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AXJ81081.1|1727501_1728020_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AXJ81082.1|1728041_1730315_-	Single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
AXJ81083.1|1730517_1732797_-	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AXJ81084.1|1733071_1733332_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AXJ81085.1|1733350_1734490_-|tRNA	Queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AXJ81086.1|1734512_1735538_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AXJ81087.1|1735539_1736544_-	Holliday junction ATP-dependent DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	1862215	1944791	2892914	protease,tRNA	Staphylococcus_phage(93.55%)	71	NA	NA
AXJ81190.1|1862215_1868776_-	Extracellular matrix-binding protein ebh precursor	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
AXJ81191.1|1869101_1869413_-	molybdopterin biosynthesis-like protein MoeZ	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AXJ81192.1|1869434_1871852_-|tRNA	Leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
AXJ81193.1|1872139_1873321_-	Multidrug resistance protein MdtH	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AXJ81194.1|1873430_1874384_+	coproporphyrinogen III oxidase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AXJ81195.1|1874380_1874944_+	16S rRNA m(4)C1402 methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AXJ81196.1|1875063_1875465_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AXJ81197.1|1877043_1877871_-	Phospholipase YtpA	NA	NA	NA	NA	NA
AXJ81198.1|1878104_1879106_+	Proline dehydrogenase 1	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AXJ81199.1|1879227_1879692_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AXJ81200.1|1879704_1880886_-	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AXJ81201.1|1880896_1881529_-	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AXJ81202.1|1881535_1882567_-	Riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
AXJ81203.1|1883059_1884562_-	hypothetical protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AXJ81204.1|1885084_1885399_+	Transcriptional repressor SdpR	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
AXJ81205.1|1885398_1886691_+	Arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AXJ81206.1|1886708_1887104_+	Arsenate-mycothiol transferase ArsC2	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
AXJ81207.1|1887398_1888253_-	Bifunctional autolysin precursor	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AXJ81208.1|1888528_1888753_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81209.1|1888951_1889422_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
AXJ81210.1|1889534_1889978_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ81211.1|1889964_1890408_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
AXJ81212.1|1890703_1891339_+|protease	CAAX amino terminal protease self- immunity	protease	NA	NA	NA	NA
AXJ81213.1|1891778_1892492_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AXJ81214.1|1892751_1893054_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ81215.1|1893309_1893675_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AXJ81216.1|1893671_1894025_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
AXJ81217.1|1896107_1896941_-	Glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
AXJ81218.1|1897152_1898061_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
AXJ81219.1|1898185_1899379_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AXJ81220.1|1899749_1901342_+	Phosphoenolpyruvate carboxykinase [ATP]	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
AXJ81221.1|1901477_1901963_-	Transposase IS200 like protein	NA	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
AXJ81222.1|1902274_1902997_-	Alpha/beta hydrolase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	98.1	2.1e-122
AXJ81223.1|1902977_1903457_-	Putative 8-oxo-dGTP diphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
AXJ81224.1|1903516_1903774_+	Putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AXJ81225.1|1903770_1904772_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
AXJ81226.1|1904776_1906255_-	2-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
AXJ81227.1|1906413_1906896_-	hypothetical protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	2.5e-79
AXJ81228.1|1907207_1907624_+	hypothetical protein	NA	A0A2H4PQM8	Staphylococcus_phage	90.4	5.2e-09
AXJ81229.1|1907902_1908898_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
AXJ81230.1|1908973_1909600_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
AXJ81231.1|1909640_1909985_+	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
AXJ81232.1|1910082_1910634_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
AXJ81233.1|1910851_1911493_-	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
AXJ81234.1|1911793_1911970_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81235.1|1911980_1912364_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81236.1|1912967_1913111_-	Transposase	NA	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
AXJ81237.1|1913980_1914358_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81238.1|1914878_1915439_-	hypothetical protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	9.5e-75
AXJ81239.1|1915755_1916928_-	Transposase, Mutator family	NA	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AXJ81240.1|1921046_1922246_-	EcoKI restriction-modification system protein HsdS	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
AXJ81241.1|1922238_1923795_-	Type I restriction enzyme EcoKI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
AXJ81242.1|1924157_1924877_-|protease	Serine protease SplF precursor	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
AXJ81243.1|1925027_1925744_-|protease	Serine protease SplE precursor	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
AXJ81244.1|1925901_1926621_-|protease	Serine protease SplD precursor	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AXJ81245.1|1926741_1927461_-|protease	Serine protease SplC precursor	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
AXJ81246.1|1927518_1928241_-|protease	Serine protease SplB precursor	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
AXJ81247.1|1928365_1929082_-|protease	Serine protease SplA precursor	protease	A0A2H4PQN3	Staphylococcus_phage	96.2	2.0e-125
AXJ81248.1|1930045_1930612_+	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
AXJ81249.1|1931085_1931784_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
AXJ81250.1|1931780_1932542_-	ABC-2 family transporter protein	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
AXJ81251.1|1932538_1933231_-	putative ABC transporter ATP-binding protein YxlF	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
AXJ81252.1|1933253_1934627_-	Thermophilic serine proteinase precursor	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
AXJ81253.1|1934636_1935155_-	Epidermin decarboxylase	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
AXJ81254.1|1935170_1936415_-	Nisin biosynthesis protein NisC	NA	A0A2H4PQH9	Staphylococcus_phage	99.8	2.6e-237
AXJ81255.1|1936407_1939401_-	hypothetical protein	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
AXJ81256.1|1939465_1939609_-	Lantibiotic gallidermin precursor	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
AXJ81257.1|1940730_1941714_-	Leucotoxin LukDv precursor	NA	A0A2H4PQH7	Staphylococcus_phage	98.8	6.8e-185
AXJ81258.1|1941715_1942651_-	Leucotoxin LukEv precursor	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
AXJ81259.1|1943534_1943990_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
AXJ81260.1|1944002_1944791_+	hypothetical protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 9
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	1973314	2052394	2892914	head,terminase,protease,tRNA,capsid,tail,lysis,holin,portal	Staphylococcus_phage(86.76%)	89	NA	NA
AXJ81285.1|1973314_1973785_-|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AXJ81286.1|1973789_1974917_-	Epoxyqueuosine reductase	NA	NA	NA	NA	NA
AXJ81287.1|1975067_1975796_-	L-cystine import ATP-binding protein TcyC	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
AXJ81288.1|1975782_1977240_-	Arginine transport system permease protein ArtQ	NA	NA	NA	NA	NA
AXJ81289.1|1977497_1978559_-	Phosphotransferase system, EIIC	NA	NA	NA	NA	NA
AXJ81290.1|1979051_1980371_+	Transposase	NA	A0A1S5SBP9	Streptococcus_phage	33.5	1.7e-50
AXJ81291.1|1988827_1989274_-	Peroxide-responsive repressor PerR	NA	NA	NA	NA	NA
AXJ81292.1|1989370_1990330_-	Glyoxylate/hydroxypyruvate reductase B	NA	NA	NA	NA	NA
AXJ81293.1|1990326_1990782_-	Putative peroxiredoxin bcp	NA	NA	NA	NA	NA
AXJ81294.1|1990862_1992152_+	Glutamate-1-semialdehyde 2,1-aminomutase 2	NA	NA	NA	NA	NA
AXJ81295.1|1992393_1993539_+	Fusaric acid resistance protein family protein	NA	NA	NA	NA	NA
AXJ81296.1|1993729_1995466_-	Putative multidrug export ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
AXJ81297.1|1995756_1996299_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81298.1|1996600_1997638_-	putative A/G-specific adenine glycosylase YfhQ	NA	NA	NA	NA	NA
AXJ81299.1|1997789_1998767_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ81300.1|1999027_1999864_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81301.1|1999872_2001390_-	Teichoic acids export ATP-binding protein TagH	NA	NA	NA	NA	NA
AXJ81302.1|2001404_2001719_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81303.1|2001696_2002515_-	Regulatory protein RecX	NA	NA	NA	NA	NA
AXJ81304.1|2002775_2003585_-	Monofunctional glycosyltransferase	NA	NA	NA	NA	NA
AXJ81305.1|2003925_2004441_-|protease	Putative cysteine protease YraA	protease	NA	NA	NA	NA
AXJ81306.1|2004571_2004733_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81307.1|2005205_2005889_-	hypothetical protein	NA	A0A0A7S0U2	Clostridium_phage	28.3	1.1e-13
AXJ81308.1|2005885_2006209_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81309.1|2006165_2007215_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ81310.1|2007833_2009288_-	putative cell wall hydrolase LytN precursor	NA	I1W626	Staphylococcus_phage	99.0	4.1e-287
AXJ81311.1|2009298_2009601_-|holin,lysis	Phage lysis protein, holin	holin,lysis	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
AXJ81312.1|2009736_2010036_-	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ81313.1|2010081_2010246_-	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ81314.1|2010238_2010628_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ81315.1|2010627_2012094_-	hypothetical protein	NA	A0A2I6PDE3	Staphylococcus_phage	94.3	2.0e-257
AXJ81316.1|2012093_2014004_-	hypothetical protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AXJ81317.1|2014019_2014310_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AXJ81318.1|2014309_2015893_-|tail	Prophage endopeptidase tail	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXJ81319.1|2015901_2016726_-|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AXJ81320.1|2016725_2022926_-	Glycyl-glycine endopeptidase ALE-1 precursor	NA	U5U762	Staphylococcus_phage	99.8	0.0e+00
AXJ81321.1|2022939_2023098_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ81322.1|2023139_2023490_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AXJ81323.1|2023547_2024003_-	Bacterial Ig-like domain (group 2)	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
AXJ81324.1|2024094_2024736_-|tail	Phage major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AXJ81325.1|2024770_2025166_-	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ81326.1|2025166_2025568_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ81327.1|2025564_2025897_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ81328.1|2025908_2026187_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AXJ81329.1|2026255_2027419_-|capsid	Phage capsid family protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
AXJ81330.1|2027430_2028204_-|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	M1TAZ4	Staphylococcus_phage	99.6	2.7e-136
AXJ81331.1|2028187_2029426_-|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	100.0	6.9e-235
AXJ81332.1|2029430_2031122_-	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	99.6	0.0e+00
AXJ81333.1|2031111_2031417_-|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ81334.1|2031545_2031860_-	HNH endonuclease	NA	Q4ZCU3	Staphylococcus_virus	100.0	2.5e-56
AXJ81335.1|2032016_2032454_-	hypothetical protein	NA	A0A2I6PEB8	Staphylococcus_phage	100.0	1.0e-76
AXJ81336.1|2032466_2033825_-	hypothetical protein	NA	A0A0K1LKG3	Staphylococcus_phage	98.9	1.4e-260
AXJ81337.1|2033814_2034105_-	VRR-NUC domain protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
AXJ81338.1|2034445_2036893_-	Virulence-associated protein E	NA	B5WZN5	Staphylococcus_phage	99.9	0.0e+00
AXJ81339.1|2036945_2037146_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ81340.1|2037213_2037369_-	Transcriptional activator RinB	NA	B5WZN3	Staphylococcus_phage	100.0	1.2e-19
AXJ81341.1|2037358_2037595_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
AXJ81342.1|2037619_2037856_-	hypothetical protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
AXJ81343.1|2037892_2038429_-	dUTPase	NA	S4V978	Staphylococcus_phage	98.9	1.0e-94
AXJ81344.1|2038421_2038604_-	hypothetical protein	NA	D2JGL7	Staphylococcus_phage	100.0	2.6e-26
AXJ81345.1|2038593_2038848_-	hypothetical protein	NA	W5R8J0	Staphylococcus_phage	100.0	5.0e-39
AXJ81346.1|2038859_2039108_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	97.6	3.0e-41
AXJ81347.1|2039107_2039362_-	hypothetical protein	NA	A0A2I6PDN8	Staphylococcus_phage	96.4	1.8e-41
AXJ81348.1|2039361_2039721_-	PVL ORF-50-like family protein	NA	D2JGL0	Staphylococcus_phage	100.0	4.5e-62
AXJ81349.1|2039721_2039907_-	hypothetical protein	NA	D2JGK9	Staphylococcus_phage	100.0	7.0e-27
AXJ81350.1|2039906_2040314_-	Endodeoxyribonuclease RusA	NA	D2JGK8	Staphylococcus_phage	100.0	1.7e-73
AXJ81351.1|2040323_2040545_-	hypothetical protein	NA	Q4ZBL4	Staphylococcus_phage	100.0	1.7e-35
AXJ81352.1|2040557_2040716_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	98.1	4.5e-22
AXJ81353.1|2040712_2041498_-	DNA replication protein DnaC	NA	A0A0H4J332	Staphylococcus_phage	99.6	4.2e-145
AXJ81354.1|2041510_2042242_-	hypothetical protein	NA	A0A1J0MGB2	Staphylococcus_phage	79.3	1.2e-80
AXJ81355.1|2042306_2042588_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
AXJ81356.1|2042580_2042730_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
AXJ81357.1|2042726_2043401_-	hypothetical protein	NA	A1KX69	Staphylococcus_virus	99.6	1.5e-130
AXJ81358.1|2043412_2043856_-	Single-stranded DNA-binding protein ssb	NA	A0A2I6PD99	Staphylococcus_phage	95.9	3.2e-73
AXJ81359.1|2043852_2044503_-	ERF superfamily protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
AXJ81360.1|2044503_2045040_-	Bacteriophage Mu Gam like protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
AXJ81361.1|2045052_2045313_-	hypothetical protein	NA	A0A059T5A3	Staphylococcus_phage	100.0	1.2e-43
AXJ81362.1|2045558_2045780_-	hypothetical protein	NA	A0A1X9H0Q4	Staphylococcus_phage	98.6	3.3e-31
AXJ81363.1|2045850_2046504_+	hypothetical protein	NA	Q4ZBF5	Staphylococcus_virus	99.5	1.3e-115
AXJ81364.1|2046513_2046657_-	hypothetical protein	NA	A0A0H4ITW0	Staphylococcus_phage	97.9	5.6e-16
AXJ81365.1|2046672_2047425_-	Phage antirepressor protein KilAC domain protein	NA	A0A0E3T9K5	Staphylococcus_phage	99.2	4.8e-138
AXJ81366.1|2047426_2047612_-	helix-turn-helix protein	NA	A0A0H4IP57	Staphylococcus_phage	100.0	1.3e-25
AXJ81367.1|2048057_2048540_+	hypothetical protein	NA	A0A0N9BAX2	Staphylococcus_phage	100.0	1.1e-82
AXJ81368.1|2048640_2048820_-	hypothetical protein	NA	A0A0H3U490	Staphylococcus_phage	98.3	2.2e-25
AXJ81369.1|2048834_2049278_-	hypothetical protein	NA	Q6R853	Staphylococcus_virus	99.3	5.8e-75
AXJ81370.1|2049325_2049538_-	helix-turn-helix protein	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
AXJ81371.1|2049689_2050421_+	LexA repressor	NA	S4SVC5	Staphylococcus_phage	100.0	6.9e-134
AXJ81372.1|2050456_2051137_+	PemK-like protein	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
AXJ81373.1|2051347_2052394_+	Tyrosine recombinase XerC	NA	Q4ZE08	Staphylococcus_virus	100.0	4.2e-201
>prophage 10
CP022906	Staphylococcus aureus strain 546 chromosome, complete genome	2892914	2807656	2825181	2892914		Streptococcus_phage(100.0%)	16	NA	NA
AXJ82062.1|2807656_2808874_-	Transposase	NA	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
AXJ82063.1|2808955_2809159_-	Excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
AXJ82064.1|2809619_2809850_-	Helix-turn-helix domain protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
AXJ82065.1|2809846_2810269_-	RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
AXJ82066.1|2810773_2811127_+	anaerobic benzoate catabolism transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	99.1	3.0e-58
AXJ82067.1|2811472_2813392_-	Tetracycline resistance protein TetM from transposon TnFO1	NA	A0A1S5SF82	Streptococcus_phage	99.4	0.0e+00
AXJ82068.1|2813768_2814704_-	Conjugative transposon protein TcpC	NA	A0A1S5SF22	Streptococcus_phage	99.4	5.9e-170
AXJ82069.1|2814700_2815657_-	putative endopeptidase p60 precursor	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	2.8e-183
AXJ82070.1|2815610_2817875_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	94.3	0.0e+00
AXJ82071.1|2817877_2820325_-	AAA-like domain protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
AXJ82072.1|2820789_2821287_-	Antirestriction protein (ArdA)	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
AXJ82073.1|2821403_2821625_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
AXJ82074.1|2821667_2822873_-	Replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
AXJ82075.1|2823050_2824436_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
AXJ82076.1|2824464_2824848_-	hypothetical protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	2.3e-64
AXJ82077.1|2824866_2825181_-	hypothetical protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
