The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	0	70036	4112629	protease,tRNA,transposase	Natrialba_phage(12.5%)	60	NA	NA
AXK11594.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AXK11595.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
AXK11596.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AXK11597.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXK11598.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AXK11599.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AXK11600.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AXK11601.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AXK11602.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AXK11603.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AXK11604.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AXK11605.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AXK11606.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AXK11607.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AXK14989.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AXK11608.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11609.1|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AXK11610.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXK11611.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK11612.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AXK11613.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11614.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AXK11615.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AXK14990.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11616.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK11617.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AXK11618.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11619.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
AXK11620.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AXK11621.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AXK11622.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AXK11623.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AXK11624.1|41318_42212_+	M48 family peptidase	NA	NA	NA	NA	NA
AXK11625.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AXK11626.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AXK11627.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AXK11628.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11629.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11630.1|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXK11631.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
AXK11632.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AXK11633.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AXK11634.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11635.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
AXK11636.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AXK11637.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AXK11638.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AXK11639.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK11640.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK11641.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11642.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AXK11643.1|60474_60894_-	transcriptional regulator	NA	NA	NA	NA	NA
AXK11644.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11645.1|62442_63279_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11646.1|63473_64055_-|protease	protease	protease	NA	NA	NA	NA
AXK11647.1|64067_64385_-	ferredoxin	NA	NA	NA	NA	NA
AXK11648.1|64488_65547_-	oxidoreductase	NA	NA	NA	NA	NA
AXK11649.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AXK11650.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK11651.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	77634	136108	4112629	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
AXK11658.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14992.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK11659.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AXK11660.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
AXK11661.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AXK11662.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
AXK11663.1|85481_86714_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
AXK11664.1|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AXK11665.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AXK11666.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AXK11667.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXK11668.1|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AXK11669.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AXK11670.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AXK11671.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11672.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AXK11673.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AXK11674.1|96203_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK11675.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AXK11676.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11677.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK11678.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AXK11679.1|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AXK11680.1|102808_103084_+	DUF493 family protein	NA	NA	NA	NA	NA
AXK11681.1|103091_103754_+	octanoyltransferase	NA	NA	NA	NA	NA
AXK11682.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
AXK11683.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AXK11684.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AXK11685.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AXK11686.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK11687.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AXK11688.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
AXK11689.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AXK11690.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AXK14993.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AXK11691.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11692.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AXK11693.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AXK11694.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AXK11695.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK11696.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AXK11697.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
AXK11698.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11699.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
AXK11700.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AXK14994.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
AXK14995.1|125750_126140_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14996.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
AXK11701.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
AXK11702.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11703.1|131150_132590_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA	NA
AXK11704.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
AXK11705.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11706.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	164893	225404	4112629	protease,tRNA,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
AXK11727.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11728.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
AXK11729.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
AXK11730.1|169127_170510_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AXK11731.1|170543_171173_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AXK11732.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AXK11733.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14999.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
AXK11734.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11735.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
AXK11736.1|176986_177802_+	META domain-containing protein	NA	NA	NA	NA	NA
AXK11737.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
AXK11738.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AXK11739.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11740.1|181333_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AXK11741.1|182425_184330_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AXK11742.1|184326_188001_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AXK11743.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AXK11744.1|188632_189055_-	glyoxalase	NA	NA	NA	NA	NA
AXK11745.1|189082_189502_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AXK15000.1|189530_189977_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AXK11746.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11747.1|190755_193026_+	lysine decarboxylase	NA	NA	NA	NA	NA
AXK11748.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK11749.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11750.1|195401_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AXK11751.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AXK11752.1|197378_198479_+	aminomethyltransferase	NA	NA	NA	NA	NA
AXK11753.1|198560_198935_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AXK11754.1|198994_201859_+	glycine dehydrogenase (aminomethyl-transferring)	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AXK11755.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11756.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
AXK11757.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11758.1|205635_206586_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11759.1|206742_207066_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AXK11760.1|207170_208220_-	cyclase family protein	NA	NA	NA	NA	NA
AXK11761.1|208216_209041_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AXK11762.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
AXK11763.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
AXK11764.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AXK11765.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
AXK15001.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11766.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK11767.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AXK11768.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
AXK11769.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AXK11770.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AXK11771.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AXK11772.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AXK11773.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AXK11774.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	233336	286924	4112629	protease,tRNA,transposase	Bacillus_phage(25.0%)	48	NA	NA
AXK11782.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11783.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK11784.1|235320_236271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11785.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK11786.1|238116_238527_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AXK11787.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11788.1|240335_241379_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK11789.1|241549_243652_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11790.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11791.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AXK11792.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AXK11793.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AXK11794.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AXK11795.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AXK11796.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AXK11797.1|251623_253513_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AXK11798.1|253599_254238_+	hypothetical protein	NA	NA	NA	NA	NA
AXK15002.1|254380_255625_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AXK11799.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AXK11800.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AXK11801.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
AXK11802.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AXK11803.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11804.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AXK11805.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
AXK11806.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11807.1|265573_266524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11808.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11809.1|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXK11810.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AXK11811.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AXK11812.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AXK11813.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AXK11814.1|274100_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AXK11815.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AXK11816.1|277140_278091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11817.1|278077_278293_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11818.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AXK11819.1|278537_278678_+	hypothetical protein	NA	NA	NA	NA	NA
AXK11820.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AXK11821.1|279655_280267_-	glutathione S-transferase	NA	NA	NA	NA	NA
AXK11822.1|280425_281280_-	cytochrome c1	NA	NA	NA	NA	NA
AXK11823.1|281299_282682_-	cytochrome b	NA	NA	NA	NA	NA
AXK11824.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AXK11825.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AXK11826.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AXK15003.1|284840_285977_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AXK11827.1|285973_286924_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	390851	448360	4112629	transposase	Orpheovirus(14.29%)	50	NA	NA
AXK11924.1|390851_391802_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11925.1|391938_392856_+	reductase	NA	NA	NA	NA	NA
AXK11926.1|392852_393101_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AXK11927.1|393097_394303_+	CoA transferase	NA	NA	NA	NA	NA
AXK11928.1|394375_395371_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11929.1|395393_396614_-	CoA transferase	NA	NA	NA	NA	NA
AXK11930.1|396610_397255_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11931.1|398985_399795_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK15009.1|400012_401053_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AXK11932.1|401151_402135_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11933.1|402061_402763_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11934.1|402811_403582_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK11935.1|403578_404820_-	CoA transferase	NA	NA	NA	NA	NA
AXK11936.1|404924_406631_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
AXK11937.1|406627_407524_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11938.1|407564_409154_-	sulfurtransferase	NA	NA	NA	NA	NA
AXK11939.1|409203_410196_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11940.1|410264_410864_-	hypothetical protein	NA	NA	NA	NA	NA
AXK15010.1|411324_412302_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11941.1|412380_413331_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11942.1|413419_414334_+	DMT family transporter	NA	NA	NA	NA	NA
AXK11943.1|414330_414990_+	LysE family translocator	NA	NA	NA	NA	NA
AXK11944.1|415079_416003_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AXK11945.1|416008_416464_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11946.1|416460_417564_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AXK15011.1|417483_417792_+	GtrA family protein	NA	NA	NA	NA	NA
AXK11947.1|417751_419371_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA	NA
AXK11948.1|419367_420426_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AXK11949.1|420555_421050_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXK11950.1|421142_422120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11951.1|422315_423521_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AXK11952.1|423517_425029_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK15012.1|425044_426358_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AXK11953.1|426548_426728_-	hypothetical protein	NA	NA	NA	NA	NA
AXK11954.1|427137_427872_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AXK11955.1|430316_431267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK11956.1|431398_431797_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AXK11957.1|432207_432678_-	universal stress protein	NA	NA	NA	NA	NA
AXK11958.1|432766_433111_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
AXK11959.1|433210_434611_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AXK11960.1|436399_436918_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AXK11961.1|437028_437784_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AXK11962.1|437979_439212_+	CoA transferase	NA	NA	NA	NA	NA
AXK11963.1|439204_439990_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK11964.1|440056_441028_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK11965.1|441038_442016_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK11966.1|442141_443314_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK11967.1|443340_444369_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK11968.1|444434_445628_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AXK11969.1|447409_448360_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	620801	721265	4112629	terminase,tail,tRNA,transposase	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
AXK12121.1|620801_621752_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12122.1|622450_622834_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12123.1|622891_623494_+	DUF2946 family protein	NA	NA	NA	NA	NA
AXK15018.1|623511_623913_-	DoxX family protein	NA	NA	NA	NA	NA
AXK15019.1|624046_624940_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12124.1|624936_625518_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AXK12125.1|626312_627047_+	arginyltransferase	NA	NA	NA	NA	NA
AXK12126.1|627087_628137_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AXK12127.1|628284_628863_-	phasin family protein	NA	NA	NA	NA	NA
AXK12128.1|629249_630227_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
AXK12129.1|630320_634715_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AXK12130.1|634915_635764_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12131.1|635922_636735_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AXK12132.1|636790_637741_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12133.1|637839_638640_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12134.1|638701_639085_+	thioredoxin	NA	NA	NA	NA	NA
AXK12135.1|639096_640530_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AXK12136.1|640736_641066_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AXK15020.1|641068_641737_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK12137.1|642000_642921_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AXK12138.1|642967_643180_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AXK12139.1|643202_643625_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AXK12140.1|643641_644742_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXK12141.1|644838_646356_-	peptidase	NA	NA	NA	NA	NA
AXK12142.1|646431_647271_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AXK12143.1|647292_648174_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AXK12144.1|648255_649350_-	porin	NA	NA	NA	NA	NA
AXK12145.1|649643_650594_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK15021.1|650668_651610_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK12146.1|651693_652053_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12147.1|652434_653472_-	sodium:calcium antiporter	NA	NA	NA	NA	NA
AXK12148.1|653788_655129_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AXK12149.1|655138_655591_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12150.1|655687_656869_+	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
AXK12151.1|656928_657960_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AXK12152.1|658000_658240_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXK12153.1|658309_659899_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AXK12154.1|659898_660447_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AXK12155.1|660527_661100_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AXK12156.1|661118_662030_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AXK12157.1|662103_663072_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
AXK12158.1|663194_664268_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AXK12159.1|664272_666093_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AXK12160.1|666169_667120_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12161.1|667208_667544_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AXK12162.1|667677_668328_+	carbonic anhydrase	NA	NA	NA	NA	NA
AXK12163.1|668349_669768_-	amidase	NA	NA	NA	NA	NA
AXK12164.1|669837_670593_-	hypothetical protein	NA	NA	NA	NA	NA
AXK15022.1|670561_671320_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK12165.1|671330_672212_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK12166.1|672228_672936_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AXK12167.1|672938_673697_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AXK12168.1|673906_675649_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
AXK12169.1|675641_676166_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AXK12170.1|676205_677000_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12171.1|677167_678241_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXK12172.1|678339_679290_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12173.1|679541_679754_-	hypothetical protein	NA	NA	NA	NA	NA
AXK15023.1|679819_680431_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AXK12174.1|680910_681231_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12175.1|681223_681922_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12176.1|681936_682158_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12177.1|682175_683126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK15024.1|683801_684251_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AXK12178.1|684237_685515_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AXK12179.1|685517_686936_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AXK15025.1|686964_688020_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AXK12180.1|688025_688268_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AXK12181.1|688390_688993_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AXK12182.1|689421_690372_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12183.1|690389_691037_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AXK12184.1|691046_691298_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12185.1|691360_691843_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AXK12186.1|691844_692045_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12187.1|692044_692440_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AXK12188.1|692436_692835_+	HK97 gp10 family phage protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AXK12189.1|692831_693254_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12190.1|693261_693762_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AXK12191.1|694016_694535_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AXK12192.1|694544_694874_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AXK12193.1|694891_695182_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AXK12194.1|695207_697820_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AXK12195.1|697829_698189_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12196.1|698256_698790_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AXK12197.1|698786_699176_+	peptidoglycan endopeptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AXK12198.1|699168_703125_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AXK12199.1|703129_703546_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12200.1|703764_704028_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AXK12201.1|704027_704840_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12202.1|704844_705087_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12203.1|705065_705617_+	lysozyme	NA	NA	NA	NA	NA
AXK12204.1|705598_706132_+	DUF2514 family protein	NA	NA	NA	NA	NA
AXK12205.1|706128_706410_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12206.1|706752_706953_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12207.1|706959_707631_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AXK12208.1|707986_708673_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXK12209.1|708653_709226_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AXK12210.1|709291_711022_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AXK12211.1|711074_711503_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AXK12212.1|711505_712186_+	protein TolQ	NA	NA	NA	NA	NA
AXK12213.1|712185_712644_+	protein TolR	NA	NA	NA	NA	NA
AXK12214.1|712680_713655_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AXK12215.1|713671_714988_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
AXK12216.1|715019_715517_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AXK12217.1|715603_716293_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AXK12218.1|716292_717342_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AXK12219.1|717338_718133_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AXK12220.1|718301_718652_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12221.1|718627_719185_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK12222.1|720109_720328_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12223.1|720314_721265_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	735952	779368	4112629	transposase	Planktothrix_phage(50.0%)	36	NA	NA
AXK12233.1|735952_736903_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12234.1|737062_737935_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
AXK12235.1|738275_738494_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
AXK12236.1|738533_739913_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AXK12237.1|739954_741352_-	amidase	NA	NA	NA	NA	NA
AXK12238.1|741391_743044_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
AXK12239.1|743047_743932_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK12240.1|743931_744873_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK12241.1|744951_746571_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12242.1|746737_747553_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12243.1|747620_748190_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12244.1|748190_749141_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12245.1|749795_750893_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AXK12246.1|750926_752192_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
AXK12247.1|752349_753300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12248.1|753543_754134_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AXK15027.1|754149_756594_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXK12249.1|756713_757685_-	FecR family protein	NA	NA	NA	NA	NA
AXK12250.1|757816_758341_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AXK12251.1|758300_759251_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12252.1|759472_761668_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
AXK12253.1|761740_762148_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXK12254.1|762270_763221_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12255.1|763336_763780_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXK12256.1|763842_764637_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXK12257.1|764802_765939_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AXK12258.1|766009_767143_-	GTPase ObgE	NA	NA	NA	NA	NA
AXK12259.1|767292_767553_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
AXK12260.1|767586_767898_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
AXK12261.1|768322_769471_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AXK12262.1|769585_770551_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AXK12263.1|770819_771686_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12264.1|771816_773865_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AXK12265.1|773882_775880_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
AXK12266.1|775914_777252_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AXK12267.1|777514_779368_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	854099	903363	4112629	holin,transposase	Vibrio_phage(33.33%)	40	NA	NA
AXK12327.1|854099_855050_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK15030.1|855022_855622_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12328.1|855623_856058_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AXK12329.1|856054_856489_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK12330.1|856472_857276_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AXK12331.1|857292_858108_-	metallophosphoesterase	NA	NA	NA	NA	NA
AXK12332.1|858104_858920_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AXK12333.1|859066_859768_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12334.1|859795_861754_-|holin	high-affinity choline transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AXK12335.1|861836_862787_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12336.1|863007_863676_+	transcriptional regulator	NA	NA	NA	NA	NA
AXK12337.1|863799_864906_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXK12338.1|864918_868032_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AXK12339.1|868028_869522_+	TolC family protein	NA	NA	NA	NA	NA
AXK12340.1|869536_870208_+	transcriptional regulator	NA	NA	NA	NA	NA
AXK12341.1|870251_870746_-	azurin	NA	NA	NA	NA	NA
AXK12342.1|870886_871534_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXK15031.1|871637_873686_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AXK12343.1|873682_875695_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
AXK12344.1|875720_877055_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AXK12345.1|877163_878156_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK12346.1|878222_880307_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AXK12347.1|880331_881303_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK12348.1|881431_882433_-	peptidase M14	NA	NA	NA	NA	NA
AXK12349.1|882466_883708_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AXK12350.1|883788_884712_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
AXK12351.1|884789_885614_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK12352.1|885810_886827_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AXK12353.1|887023_888007_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK12354.1|889605_890994_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AXK12355.1|891024_892014_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK12356.1|892124_893357_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AXK12357.1|893638_894439_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12358.1|894461_896693_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AXK12359.1|897480_897927_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AXK12360.1|897948_898695_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AXK12361.1|898838_899816_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AXK12362.1|900449_901061_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AXK12363.1|901054_902272_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AXK12364.1|902412_903363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	912975	977914	4112629	transposase	Bacillus_phage(18.18%)	59	NA	NA
AXK12373.1|912975_913926_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12374.1|913922_915773_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AXK12375.1|916153_916813_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AXK12376.1|916900_917053_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12377.1|917161_917329_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12378.1|917340_918021_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AXK12379.1|918302_919019_+	flagellar brake protein	NA	NA	NA	NA	NA
AXK12380.1|919033_920335_-	phospholipase	NA	NA	NA	NA	NA
AXK12381.1|922479_925368_+	HD domain-containing protein	NA	NA	NA	NA	NA
AXK12382.1|925591_926944_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AXK12383.1|927489_928944_+	carboxylase	NA	NA	NA	NA	NA
AXK12384.1|928978_929227_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12385.1|929332_930208_+	amidohydrolase	NA	NA	NA	NA	NA
AXK12386.1|930233_931289_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
AXK12387.1|931301_932093_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12388.1|932125_933496_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AXK12389.1|934672_935623_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12390.1|935675_935897_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12391.1|936056_936269_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12392.1|936388_937507_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AXK12393.1|937603_937819_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12394.1|938012_938264_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12395.1|938376_939327_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12396.1|939323_939707_-	ferredoxin	NA	NA	NA	NA	NA
AXK12397.1|939761_941579_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AXK15033.1|941725_942553_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AXK15034.1|942598_943579_+	aldo/keto reductase	NA	NA	NA	NA	NA
AXK12398.1|943575_943788_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12399.1|943784_944966_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AXK12400.1|945129_945864_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AXK12401.1|945865_948478_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
AXK12402.1|948613_950527_-	S9 family peptidase	NA	NA	NA	NA	NA
AXK12403.1|951142_951553_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AXK12404.1|951650_952736_+	DNA polymerase IV	NA	NA	NA	NA	NA
AXK12405.1|952834_953785_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12406.1|953781_954756_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK12407.1|954880_955792_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AXK15035.1|956068_956461_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AXK12408.1|956590_957541_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12409.1|957570_957753_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AXK12410.1|957791_958049_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12411.1|958525_959707_-	MFS transporter	NA	NA	NA	NA	NA
AXK12412.1|959922_960600_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AXK12413.1|960596_961370_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AXK12414.1|961447_962029_-	OmpA family protein	NA	NA	NA	NA	NA
AXK12415.1|962399_965081_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AXK12416.1|965080_966214_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AXK12417.1|966206_967292_+	prephenate dehydratase	NA	NA	NA	NA	NA
AXK12418.1|967378_968278_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AXK12419.1|968274_969603_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AXK12420.1|969617_970289_+	(d)CMP kinase	NA	NA	NA	NA	NA
AXK12421.1|970461_972192_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AXK12422.1|972193_972553_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AXK12423.1|972744_973059_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AXK12424.1|973101_974322_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AXK12425.1|974318_975260_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AXK12426.1|975256_976246_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AXK12427.1|976280_976865_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
AXK12428.1|976963_977914_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	997314	1069812	4112629	tRNA,transposase	Enterococcus_phage(14.29%)	58	NA	NA
AXK12443.1|997314_998265_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12444.1|998369_999419_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AXK12445.1|999556_1000573_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AXK12446.1|1002081_1002654_-	chorismate lyase	NA	NA	NA	NA	NA
AXK12447.1|1002713_1003445_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AXK15037.1|1003496_1004414_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12448.1|1005221_1008401_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXK12449.1|1008397_1009780_+	multidrug transporter	NA	NA	NA	NA	NA
AXK12450.1|1009849_1010101_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AXK12451.1|1010246_1010897_-	SCO family protein	NA	NA	NA	NA	NA
AXK12452.1|1011047_1013162_-	M3 family peptidase	NA	NA	NA	NA	NA
AXK12453.1|1013237_1014089_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AXK12454.1|1014085_1014712_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXK12455.1|1014708_1016463_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AXK12456.1|1016755_1019461_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AXK12457.1|1019473_1021135_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AXK12458.1|1021147_1022938_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AXK12459.1|1023159_1024335_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
AXK12460.1|1024377_1025328_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK12461.1|1025426_1026167_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AXK12462.1|1026361_1028398_+	transketolase	NA	NA	NA	NA	NA
AXK12463.1|1028415_1029426_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXK12464.1|1029543_1030737_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AXK12465.1|1030766_1031540_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AXK12466.1|1031536_1032727_-	acetate kinase	NA	NA	NA	NA	NA
AXK12467.1|1032752_1033691_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AXK15038.1|1033687_1036036_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
AXK12468.1|1036190_1036898_-	glutathione transferase	NA	NA	NA	NA	NA
AXK12469.1|1036935_1038069_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK12470.1|1038345_1038894_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AXK12471.1|1038912_1039398_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXK12472.1|1039575_1040514_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AXK12473.1|1040516_1040834_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12474.1|1040879_1041824_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12475.1|1043504_1044155_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AXK12476.1|1044208_1044544_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12477.1|1044540_1045401_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AXK12478.1|1045417_1045699_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12479.1|1045772_1046036_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AXK12480.1|1046279_1047230_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12481.1|1047528_1048266_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AXK12482.1|1048701_1049025_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
AXK12483.1|1049059_1049620_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AXK12484.1|1049740_1050616_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AXK12485.1|1050628_1051576_+	motility protein MotB	NA	NA	NA	NA	NA
AXK12486.1|1051677_1051971_+	response regulator	NA	NA	NA	NA	NA
AXK12487.1|1051997_1054055_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AXK12488.1|1054069_1054570_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AXK12489.1|1054643_1056350_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AXK12490.1|1057213_1058266_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AXK12491.1|1058318_1058708_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AXK12492.1|1058716_1059349_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AXK12493.1|1062280_1063924_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AXK12494.1|1063920_1064823_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AXK12495.1|1064948_1065422_-	endoribonuclease YbeY	NA	NA	NA	NA	NA
AXK12496.1|1065411_1066434_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AXK12497.1|1066430_1067858_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AXK12498.1|1068795_1069812_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1073565	1134592	4112629	holin,tRNA,transposase	Catovirus(20.0%)	50	NA	NA
AXK12502.1|1073565_1074702_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AXK12503.1|1074698_1075772_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AXK12504.1|1075929_1077366_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AXK15039.1|1077456_1078098_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AXK12505.1|1078433_1079450_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AXK12506.1|1079782_1082530_+	pertactin autotransporter	NA	NA	NA	NA	NA
AXK15040.1|1082596_1084018_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AXK12507.1|1084281_1084998_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12508.1|1085082_1085400_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AXK12509.1|1085440_1085854_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AXK12510.1|1085855_1086215_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12511.1|1086257_1087802_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AXK12512.1|1087885_1088716_+	transglycosylase	NA	NA	NA	NA	NA
AXK12513.1|1088750_1089905_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AXK12514.1|1089947_1090820_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12515.1|1090936_1093225_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AXK12516.1|1094431_1094896_+	barstar family protein 2	NA	NA	NA	NA	NA
AXK12517.1|1094922_1095873_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK15041.1|1096240_1097017_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AXK12518.1|1097061_1097919_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
AXK12519.1|1097940_1098957_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AXK12520.1|1099091_1100132_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AXK12521.1|1100326_1102408_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AXK12522.1|1102643_1104137_+	exopolyphosphatase	NA	NA	NA	NA	NA
AXK12523.1|1104367_1105162_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXK12524.1|1105382_1106741_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AXK12525.1|1106737_1107580_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AXK12526.1|1107598_1109485_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AXK12527.1|1109722_1110355_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
AXK12528.1|1110373_1110976_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
AXK12529.1|1111127_1112078_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12530.1|1112880_1113681_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12531.1|1113724_1114711_-	homoserine kinase	NA	NA	NA	NA	NA
AXK12532.1|1114850_1115864_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AXK12533.1|1115860_1116811_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12534.1|1116923_1117382_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AXK12535.1|1117418_1118732_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
AXK12536.1|1118749_1119121_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AXK12537.1|1119117_1120581_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AXK12538.1|1120673_1121450_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXK12539.1|1121431_1124311_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AXK12540.1|1124493_1125444_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12541.1|1125611_1126436_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AXK12542.1|1126435_1127314_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK12543.1|1128218_1129334_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12544.1|1129341_1130157_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AXK12545.1|1130153_1132019_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AXK12546.1|1132097_1132730_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12547.1|1132726_1133029_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12548.1|1133071_1134592_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 12
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1287941	1353249	4112629	tRNA,transposase	Bacillus_virus(18.18%)	58	NA	NA
AXK12673.1|1287941_1288676_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
AXK12674.1|1288692_1290513_+	translational GTPase TypA	NA	NA	NA	NA	NA
AXK12675.1|1290583_1291309_-	toxin	NA	NA	NA	NA	NA
AXK12676.1|1291305_1291710_-	hypothetical protein	NA	NA	NA	NA	NA
AXK15050.1|1291861_1292434_-	TIGR00730 family Rossman fold protein	NA	F4YCQ1	Synechococcus_phage	26.8	1.7e-07
AXK12677.1|1292543_1295258_+	DNA polymerase I	NA	B6V2J7	Bacillus_phage	30.7	5.0e-68
AXK12678.1|1295368_1296205_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AXK12679.1|1296259_1297048_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AXK12680.1|1297081_1298743_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
AXK12681.1|1298904_1300302_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
AXK12682.1|1300439_1301099_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12683.1|1301134_1303960_-	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA	NA
AXK12684.1|1307733_1308990_-	transcription termination factor Rho	NA	NA	NA	NA	NA
AXK12685.1|1309102_1309528_-	thioredoxin TrxA	NA	A0A1J0GW78	Streptomyces_phage	46.2	1.6e-18
AXK12686.1|1309670_1311683_+	type IIA DNA topoisomerase subunit B	NA	G3M9Z3	Bacillus_virus	35.6	3.3e-93
AXK12687.1|1311682_1312291_+	YcxB family protein	NA	NA	NA	NA	NA
AXK12688.1|1312308_1314624_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.5	4.5e-78
AXK12689.1|1314626_1315841_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
AXK12690.1|1315837_1316788_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12691.1|1317556_1318195_-	glutathione S-transferase	NA	NA	NA	NA	NA
AXK15051.1|1319084_1319531_+	glutamate racemase	NA	NA	NA	NA	NA
AXK12692.1|1319612_1320314_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AXK12693.1|1320314_1321082_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AXK12694.1|1321078_1322317_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AXK12695.1|1322316_1323243_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AXK12696.1|1323345_1324461_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12697.1|1324476_1325427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12698.1|1325780_1326362_-	VUT family protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AXK12699.1|1326358_1327192_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AXK15052.1|1327402_1328716_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AXK12700.1|1328892_1329774_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AXK12701.1|1329793_1330645_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AXK12702.1|1330697_1331786_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AXK12703.1|1331896_1333024_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK15053.1|1333258_1333870_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK12704.1|1333968_1334919_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12705.1|1335140_1335518_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AXK15054.1|1335665_1336163_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AXK12706.1|1336159_1336687_+	RES domain-containing protein	NA	NA	NA	NA	NA
AXK12707.1|1336820_1337636_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12708.1|1337648_1338830_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AXK12709.1|1338877_1339771_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AXK15055.1|1339897_1340368_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12710.1|1340493_1341321_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AXK12711.1|1341349_1342126_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AXK12712.1|1342122_1342416_-	biotin--protein ligase	NA	NA	NA	NA	NA
AXK12713.1|1342412_1342877_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXK12714.1|1342888_1343674_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AXK12715.1|1343635_1343815_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12716.1|1343801_1344752_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12717.1|1344850_1345801_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12718.1|1345797_1346298_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AXK12719.1|1346380_1347559_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AXK12720.1|1349186_1349522_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXK12721.1|1349709_1351158_+	CoA transferase	NA	NA	NA	NA	NA
AXK12722.1|1351215_1351560_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AXK12723.1|1351666_1352206_-	peroxiredoxin	NA	NA	NA	NA	NA
AXK12724.1|1352298_1353249_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1477052	1515642	4112629	protease,transposase	Emiliania_huxleyi_virus(14.29%)	35	NA	NA
AXK12813.1|1477052_1478387_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AXK12814.1|1478439_1480776_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AXK15065.1|1480901_1481465_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
AXK12815.1|1481473_1482565_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AXK12816.1|1482636_1483092_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA	NA
AXK12817.1|1483092_1483887_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AXK12818.1|1483883_1485065_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AXK12819.1|1485051_1485657_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
AXK12820.1|1485653_1486427_+	RNA methyltransferase	NA	NA	NA	NA	NA
AXK12821.1|1486438_1487266_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA	NA
AXK12822.1|1487427_1489791_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
AXK12823.1|1489858_1490578_-	glutamine amidotransferase	NA	NA	NA	NA	NA
AXK12824.1|1490701_1491127_+	NfeD family protein	NA	NA	NA	NA	NA
AXK12825.1|1491161_1492112_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12826.1|1492229_1493156_+	paraslipin	NA	NA	NA	NA	NA
AXK12827.1|1493221_1494379_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AXK12828.1|1494359_1494827_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AXK12829.1|1494974_1495925_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12830.1|1495941_1496376_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
AXK12831.1|1496365_1496716_+	RnfH family protein	NA	NA	NA	NA	NA
AXK12832.1|1496912_1498067_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK12833.1|1498063_1499236_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK12834.1|1499283_1500177_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AXK12835.1|1500222_1500660_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AXK12836.1|1500719_1501409_+	VIT family protein	NA	NA	NA	NA	NA
AXK12837.1|1501418_1502369_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12838.1|1502467_1503418_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12839.1|1503516_1504500_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
AXK12840.1|1504762_1505860_+	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
AXK12841.1|1505870_1509113_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AXK12842.1|1510134_1510779_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AXK12843.1|1510789_1511689_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12844.1|1511736_1512822_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
AXK12845.1|1512818_1514513_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AXK12846.1|1514691_1515642_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1542741	1600823	4112629	protease,tRNA,transposase	Planktothrix_phage(15.38%)	60	NA	NA
AXK12871.1|1542741_1543554_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AXK12872.1|1543698_1544793_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12873.1|1545004_1545634_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12874.1|1545636_1547304_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AXK12875.1|1547318_1547975_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AXK12876.1|1548454_1549405_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12877.1|1549431_1550205_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AXK12878.1|1550216_1551458_+	MFS transporter	NA	NA	NA	NA	NA
AXK12879.1|1553239_1554190_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12880.1|1554221_1555319_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AXK12881.1|1555315_1556266_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12882.1|1556687_1557080_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12883.1|1557085_1557862_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXK12884.1|1558249_1560199_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AXK12885.1|1560219_1560765_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AXK12886.1|1560901_1561858_+	glutathione synthetase	NA	NA	NA	NA	NA
AXK12887.1|1561868_1562267_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AXK12888.1|1562382_1562652_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AXK12889.1|1562773_1564468_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AXK12890.1|1564632_1564857_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12891.1|1565455_1566406_+	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
AXK12892.1|1566447_1567608_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12893.1|1567768_1568689_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AXK12894.1|1568701_1569343_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AXK12895.1|1569339_1570011_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AXK12896.1|1570007_1570778_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AXK12897.1|1570876_1571827_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12898.1|1572043_1572448_-	GFA family protein	NA	NA	NA	NA	NA
AXK12899.1|1572521_1573712_-	NAD-dependent formate dehydrogenase	NA	NA	NA	NA	NA
AXK12900.1|1573745_1574072_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AXK12901.1|1574094_1574610_-	transporter	NA	NA	NA	NA	NA
AXK12902.1|1574668_1575895_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	58.8	5.2e-134
AXK12903.1|1576072_1577203_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXK12904.1|1577437_1578019_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AXK12905.1|1578155_1579220_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
AXK12906.1|1579304_1579751_-	GFA family protein	NA	NA	NA	NA	NA
AXK12907.1|1579975_1580857_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	36.1	1.8e-51
AXK12908.1|1580911_1581163_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
AXK12909.1|1581165_1581567_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AXK12910.1|1581586_1581823_+	hypothetical protein	NA	NA	NA	NA	NA
AXK12911.1|1581830_1582310_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AXK12912.1|1582495_1582975_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.5	6.5e-16
AXK12913.1|1582977_1584168_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AXK12914.1|1584172_1585225_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.8	4.8e-35
AXK12915.1|1585361_1586384_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.7	1.6e-67
AXK12916.1|1586475_1587312_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12917.1|1587504_1588410_+	agmatinase	NA	NA	NA	NA	NA
AXK12918.1|1588436_1589228_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12919.1|1589250_1589943_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK12920.1|1589964_1590717_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	2.8e-29
AXK12921.1|1590845_1592405_+	acetolactate synthase large subunit	NA	NA	NA	NA	NA
AXK12922.1|1592436_1592982_+	acyl dehydratase	NA	NA	NA	NA	NA
AXK12923.1|1593119_1594376_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK12924.1|1594392_1596087_-	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	24.5	3.8e-26
AXK12925.1|1596244_1597132_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.7	3.4e-18
AXK12926.1|1597169_1598102_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.5	2.3e-25
AXK15067.1|1598115_1598604_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AXK12927.1|1598721_1599300_+|protease	protease	protease	NA	NA	NA	NA
AXK12928.1|1599372_1599774_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AXK12929.1|1599872_1600823_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1656025	1727177	4112629	transposase	Ectocarpus_siliculosus_virus(10.0%)	53	NA	NA
AXK12976.1|1656025_1656976_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12977.1|1656997_1658218_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AXK12978.1|1658403_1659816_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AXK12979.1|1659879_1660947_+	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AXK12980.1|1660943_1662434_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AXK15070.1|1662443_1663388_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12981.1|1663547_1664246_+	pirin family protein	NA	NA	NA	NA	NA
AXK12982.1|1664323_1665229_+	pirin family protein	NA	NA	NA	NA	NA
AXK12983.1|1665248_1666199_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK12984.1|1666297_1667092_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
AXK12985.1|1667096_1668767_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AXK12986.1|1668890_1669940_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK12987.1|1670261_1671038_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AXK12988.1|1671102_1672005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12989.1|1673298_1674102_+	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
AXK12990.1|1676795_1677182_+	RidA family protein	NA	NA	NA	NA	NA
AXK12991.1|1677197_1679288_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AXK12992.1|1679339_1680293_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
AXK15071.1|1680307_1681195_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK12993.1|1681332_1682859_+	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA	NA
AXK15072.1|1682957_1683458_+	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
AXK12994.1|1683781_1685737_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AXK12995.1|1685904_1687989_-	hypothetical protein	NA	NA	NA	NA	NA
AXK12996.1|1688015_1688801_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
AXK12997.1|1689656_1690427_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA	NA
AXK12998.1|1690426_1691167_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AXK12999.1|1691208_1692378_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
AXK13000.1|1692409_1694494_+	glycosyltransferase	NA	NA	NA	NA	NA
AXK13001.1|1694490_1695381_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AXK13002.1|1695377_1696475_+	capsular polysaccharide export protein	NA	NA	NA	NA	NA
AXK13003.1|1696497_1697787_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
AXK13004.1|1697798_1698824_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
AXK13005.1|1698820_1700878_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AXK13006.1|1700891_1702067_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AXK13007.1|1702148_1703099_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13008.1|1703157_1703931_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK13009.1|1703923_1705480_+	LTA synthase family protein	NA	NA	NA	NA	NA
AXK13010.1|1705476_1706427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13011.1|1707753_1708356_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13012.1|1708595_1709297_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AXK13013.1|1709290_1710073_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AXK13014.1|1710257_1711208_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13015.1|1711306_1712044_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AXK13016.1|1712233_1712992_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK13017.1|1713038_1714028_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13018.1|1714205_1715174_-	transporter	NA	NA	NA	NA	NA
AXK13019.1|1716713_1717682_+	AAA family ATPase	NA	NA	NA	NA	NA
AXK13020.1|1717690_1718632_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AXK13021.1|1719105_1720116_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AXK15073.1|1720106_1721621_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AXK15074.1|1722964_1723999_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AXK13022.1|1724048_1725674_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AXK13023.1|1726226_1727177_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1747968	1788818	4112629	tRNA,transposase	uncultured_Caudovirales_phage(20.0%)	35	NA	NA
AXK13037.1|1747968_1748919_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK15080.1|1749212_1749935_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AXK13038.1|1750373_1751561_-	MFS transporter	NA	NA	NA	NA	NA
AXK13039.1|1751564_1751945_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13040.1|1753664_1754636_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13041.1|1754649_1755363_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK13042.1|1755367_1756285_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13043.1|1756391_1756688_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13044.1|1756786_1757737_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13045.1|1758895_1761829_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AXK13046.1|1761828_1762173_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AXK13047.1|1762169_1763798_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AXK13048.1|1763794_1764274_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AXK13049.1|1764270_1764555_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AXK13050.1|1764551_1764878_+	cation:proton antiporter	NA	NA	NA	NA	NA
AXK13051.1|1765033_1765984_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13052.1|1766082_1767033_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13053.1|1767076_1767619_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13054.1|1767716_1768565_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AXK13055.1|1768557_1769064_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AXK13056.1|1769060_1770062_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
AXK13057.1|1770074_1770869_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK13058.1|1770917_1772819_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AXK13059.1|1772815_1773439_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13060.1|1773565_1774690_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13061.1|1775007_1776675_+	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
AXK13062.1|1776830_1777607_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AXK13063.1|1777691_1778690_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13064.1|1778686_1779460_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK13065.1|1780444_1781395_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13066.1|1781418_1781883_-	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
AXK13067.1|1782029_1783238_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
AXK13068.1|1783248_1783719_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AXK13069.1|1783837_1785127_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AXK13070.1|1787867_1788818_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	1991551	2061203	4112629	tRNA,transposase	Staphylococcus_phage(16.67%)	56	NA	NA
AXK13222.1|1991551_1994209_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
AXK13223.1|1994286_1995489_-	MFS transporter	NA	NA	NA	NA	NA
AXK13224.1|1995485_1995998_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXK15088.1|1996120_1996459_-	DNA-binding protein	NA	NA	NA	NA	NA
AXK13225.1|1996834_1997785_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13226.1|1997883_1998834_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13227.1|1998997_2000893_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
AXK13228.1|2001006_2001174_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
AXK13229.1|2001237_2001474_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AXK13230.1|2001842_2003042_-	MFS transporter	NA	NA	NA	NA	NA
AXK13231.1|2004557_2005508_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13232.1|2005959_2006961_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13233.1|2007133_2007991_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
AXK13234.1|2007987_2009250_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
AXK13235.1|2009350_2009725_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AXK13236.1|2009773_2010985_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AXK13237.1|2011069_2011840_+	spermidine synthase	NA	NA	NA	NA	NA
AXK13238.1|2011953_2012718_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXK15089.1|2012833_2013970_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
AXK13239.1|2013966_2014773_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK13240.1|2016517_2017489_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK15090.1|2017645_2018158_+	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
AXK13241.1|2018316_2019291_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13242.1|2020291_2021086_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
AXK15091.1|2021111_2021918_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13243.1|2022028_2022619_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AXK13244.1|2022629_2023808_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
AXK13245.1|2023910_2024285_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXK13246.1|2024537_2025869_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXK13247.1|2025935_2029166_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXK13248.1|2030656_2031403_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AXK13249.1|2031487_2031949_+	holo-ACP synthase	NA	NA	NA	NA	NA
AXK13250.1|2031986_2033045_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
AXK13251.1|2033007_2034837_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
AXK13252.1|2034876_2035449_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AXK13253.1|2036873_2037785_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
AXK13254.1|2038013_2039336_+	isocitrate lyase	NA	NA	NA	NA	NA
AXK13255.1|2039695_2040331_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13256.1|2040290_2041241_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK13257.1|2042111_2042984_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK13258.1|2043061_2044201_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13259.1|2044550_2045816_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AXK13260.1|2045821_2046349_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AXK13261.1|2046353_2047172_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK13262.1|2047171_2047894_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK13263.1|2047915_2048230_+	ferredoxin	NA	NA	NA	NA	NA
AXK13264.1|2048226_2049396_+	CoA transferase	NA	NA	NA	NA	NA
AXK13265.1|2049426_2050302_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK13266.1|2050298_2051618_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AXK13267.1|2051690_2052887_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AXK13268.1|2052897_2054385_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13269.1|2056979_2057879_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13270.1|2058016_2058982_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13271.1|2059080_2060031_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13272.1|2060074_2060266_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13273.1|2060252_2061203_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2072699	2122095	4112629	transposase	Erysipelothrix_phage(16.67%)	44	NA	NA
AXK13285.1|2072699_2073650_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13286.1|2074787_2075084_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13287.1|2075258_2076611_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AXK13288.1|2076753_2077770_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AXK15093.1|2079749_2080763_-	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AXK13289.1|2080849_2081755_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13290.1|2081911_2082256_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13291.1|2082413_2082872_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AXK13292.1|2082885_2085102_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AXK13293.1|2085098_2086160_+	XdhC family protein	NA	NA	NA	NA	NA
AXK13294.1|2086188_2087163_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXK13295.1|2087114_2087933_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AXK13296.1|2087945_2088554_-	peptidase S16	NA	NA	NA	NA	NA
AXK13297.1|2088728_2089124_+	VOC family protein	NA	NA	NA	NA	NA
AXK13298.1|2089142_2090582_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AXK13299.1|2090610_2090958_+	GFA family protein	NA	NA	NA	NA	NA
AXK13300.1|2090976_2091927_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13301.1|2092579_2093530_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13302.1|2093613_2095431_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AXK13303.1|2095504_2096152_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13304.1|2096164_2097094_-	ZIP family metal transporter	NA	NA	NA	NA	NA
AXK13305.1|2097263_2097728_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13306.1|2097975_2098656_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13307.1|2098704_2100396_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AXK13308.1|2100411_2100963_-	ATPase	NA	NA	NA	NA	NA
AXK13309.1|2100959_2101331_-	transcriptional regulator	NA	NA	NA	NA	NA
AXK13310.1|2101443_2102280_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK13311.1|2102290_2102815_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AXK13312.1|2102912_2103092_+	DUF3008 family protein	NA	NA	NA	NA	NA
AXK13313.1|2103221_2104253_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXK13314.1|2104326_2104683_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AXK15094.1|2104672_2105548_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AXK13315.1|2105646_2106531_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13316.1|2106552_2107848_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AXK13317.1|2108796_2109447_+	flavodoxin family protein	NA	NA	NA	NA	NA
AXK15095.1|2109534_2111055_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AXK13318.1|2111312_2113178_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXK13319.1|2114223_2115174_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13320.1|2116146_2116506_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AXK13321.1|2116493_2117930_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AXK13322.1|2117926_2118580_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK13323.1|2118576_2119776_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AXK13324.1|2119873_2121148_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AXK13325.1|2121144_2122095_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2133299	2186681	4112629	tRNA,protease,transposase	Klosneuvirus(22.22%)	45	NA	NA
AXK13339.1|2133299_2134250_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13340.1|2134348_2135299_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13341.1|2135258_2135672_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AXK13342.1|2135956_2136256_+	hypothetical protein	NA	NA	NA	NA	NA
AXK15097.1|2136665_2138834_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AXK13343.1|2139633_2141664_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AXK13344.1|2141683_2141896_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AXK13345.1|2142173_2142713_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AXK13346.1|2142826_2144134_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AXK13347.1|2144198_2145356_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AXK13348.1|2145539_2146439_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AXK13349.1|2146457_2147762_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AXK13350.1|2147727_2148834_-	GTPase HflX	NA	NA	NA	NA	NA
AXK13351.1|2148921_2149158_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AXK13352.1|2149296_2150367_-	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AXK13353.1|2150370_2151726_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AXK13354.1|2151752_2152913_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AXK13355.1|2152915_2153554_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13356.1|2153555_2154860_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AXK13357.1|2154900_2156196_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AXK13358.1|2156202_2156709_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AXK13359.1|2156705_2157854_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AXK13360.1|2157881_2158307_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AXK13361.1|2158629_2161512_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AXK13362.1|2161604_2162360_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
AXK13363.1|2163125_2164475_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AXK13364.1|2164573_2165524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13365.1|2165622_2166573_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13366.1|2166646_2167120_+	RidA family protein	NA	NA	NA	NA	NA
AXK13367.1|2167145_2168354_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AXK13368.1|2168350_2169124_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AXK13369.1|2169123_2169747_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AXK13370.1|2169912_2170173_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
AXK13371.1|2170476_2171058_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13372.1|2171124_2171379_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AXK13373.1|2171365_2173990_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
AXK13374.1|2174061_2174880_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13375.1|2174876_2175482_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AXK13376.1|2175519_2176653_-	general secretion pathway protein	NA	NA	NA	NA	NA
AXK15098.1|2178368_2178743_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13377.1|2178840_2180115_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13378.1|2180118_2181696_-	lipoprotein	NA	NA	NA	NA	NA
AXK13379.1|2182602_2183958_-	amidase	NA	NA	NA	NA	NA
AXK13380.1|2183954_2185589_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
AXK13381.1|2185730_2186681_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2202822	2258057	4112629	protease,transposase	Lake_Baikal_phage(25.0%)	50	NA	NA
AXK13395.1|2202822_2203773_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13396.1|2203972_2204782_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK13397.1|2204906_2205857_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13398.1|2205853_2206747_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AXK13399.1|2206871_2207066_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AXK13400.1|2207065_2207407_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AXK13401.1|2207416_2209279_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AXK13402.1|2209408_2209921_-	co-chaperone protein HscB	NA	NA	NA	NA	NA
AXK13403.1|2209923_2210247_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AXK13404.1|2210248_2210659_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AXK13405.1|2210696_2211908_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AXK13406.1|2211925_2212438_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AXK13407.1|2212653_2213145_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AXK13408.1|2213397_2215434_-	UvrABC system protein B	NA	NA	NA	NA	NA
AXK13409.1|2215511_2216714_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AXK13410.1|2216764_2217493_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AXK13411.1|2219050_2220001_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13412.1|2220571_2220784_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13413.1|2220801_2221533_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13414.1|2221567_2222209_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AXK13415.1|2222201_2222918_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
AXK13416.1|2225082_2225859_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK13417.1|2225880_2227038_-	thiolase	NA	NA	NA	NA	NA
AXK13418.1|2227034_2227466_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13419.1|2227462_2228266_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK13420.1|2228279_2228735_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AXK13421.1|2228747_2229719_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13422.1|2229784_2231008_-	CoA transferase	NA	NA	NA	NA	NA
AXK13423.1|2231235_2232186_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13424.1|2232309_2234763_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AXK13425.1|2234951_2236256_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AXK13426.1|2236360_2237014_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AXK13427.1|2237016_2238327_-	trigger factor	NA	NA	NA	NA	NA
AXK13428.1|2238505_2239084_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AXK13429.1|2239195_2239396_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AXK13430.1|2239741_2240308_-	DUF924 family protein	NA	NA	NA	NA	NA
AXK13431.1|2240391_2240595_-	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AXK13432.1|2240901_2241222_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13433.1|2241263_2241545_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13434.1|2241619_2242876_-	autotransporter Phg	NA	NA	NA	NA	NA
AXK13435.1|2243258_2243588_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AXK13436.1|2245158_2245980_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AXK13437.1|2245979_2247119_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AXK13438.1|2247125_2248022_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AXK13439.1|2248018_2249944_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AXK13440.1|2250303_2252916_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXK13441.1|2252968_2255269_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AXK13442.1|2255265_2256474_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AXK13443.1|2256735_2257110_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13444.1|2257106_2258057_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2261164	2322201	4112629	tRNA,transposase	Klosneuvirus(14.29%)	54	NA	NA
AXK13447.1|2261164_2264026_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AXK13448.1|2264028_2264535_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
AXK13449.1|2264639_2265848_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
AXK13450.1|2265849_2266788_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13451.1|2266949_2267423_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AXK13452.1|2267419_2268370_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13453.1|2268356_2268536_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13454.1|2268480_2268921_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AXK13455.1|2269049_2270279_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
AXK13456.1|2270317_2271139_-	DUF455 family protein	NA	NA	NA	NA	NA
AXK13457.1|2271192_2272344_+	N-acetyltransferase	NA	NA	NA	NA	NA
AXK13458.1|2272435_2272924_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AXK13459.1|2275450_2278024_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AXK13460.1|2278094_2280668_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AXK13461.1|2280933_2281134_+	CsbD family protein	NA	NA	NA	NA	NA
AXK13462.1|2281165_2281327_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AXK13463.1|2281384_2281723_+	BON domain-containing protein	NA	NA	NA	NA	NA
AXK13464.1|2281871_2282822_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13465.1|2282920_2283871_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13466.1|2283969_2284689_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AXK15099.1|2284765_2285314_+	arylesterase	NA	NA	NA	NA	NA
AXK13467.1|2285295_2287311_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AXK13468.1|2287493_2288243_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AXK13469.1|2288255_2289119_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AXK13470.1|2289122_2290538_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AXK13471.1|2290671_2291400_-	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AXK13472.1|2291538_2291739_-	copper chaperone	NA	NA	NA	NA	NA
AXK13473.1|2291914_2292313_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AXK13474.1|2292336_2293737_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AXK15100.1|2293855_2294608_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13475.1|2294896_2295574_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13476.1|2295600_2296380_-	3'-5' exonuclease	NA	NA	NA	NA	NA
AXK13477.1|2296376_2297261_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AXK15101.1|2297278_2297968_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AXK13478.1|2298042_2298801_-	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AXK13479.1|2298926_2299574_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
AXK13480.1|2299841_2300858_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AXK13481.1|2300955_2301996_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AXK13482.1|2302130_2303423_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AXK13483.1|2304782_2305166_+	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AXK13484.1|2305183_2305771_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AXK13485.1|2305808_2306759_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13486.1|2306857_2307418_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AXK13487.1|2307414_2307960_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13488.1|2308155_2309184_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13489.1|2309224_2310565_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AXK13490.1|2310673_2311678_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13491.1|2311784_2314385_+	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AXK13492.1|2314483_2315434_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13493.1|2315430_2315703_-	hypothetical protein	NA	NA	NA	NA	NA
AXK15102.1|2315961_2318673_-	autotransporter BapA	NA	NA	NA	NA	NA
AXK13494.1|2319240_2320785_+	cardiolipin synthase	NA	NA	NA	NA	NA
AXK13495.1|2320781_2321132_-	anti-sigma factor antagonist	NA	NA	NA	NA	NA
AXK13496.1|2321250_2322201_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2582910	2647271	4112629	tRNA,transposase	uncultured_Mediterranean_phage(10.0%)	57	NA	NA
AXK13719.1|2582910_2584266_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AXK13720.1|2584312_2585692_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AXK13721.1|2585754_2586387_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
AXK15112.1|2586386_2588747_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AXK13722.1|2588788_2589748_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AXK13723.1|2589734_2590421_+	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AXK13724.1|2590417_2590750_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AXK13725.1|2590865_2591816_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13726.1|2591914_2592865_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13727.1|2592861_2594928_-	cation acetate symporter	NA	NA	NA	NA	NA
AXK13728.1|2594927_2595200_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AXK13729.1|2595894_2595984_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AXK13730.1|2595983_2597768_+	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AXK13731.1|2597791_2599957_+	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AXK13732.1|2599967_2600567_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AXK13733.1|2603388_2604084_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AXK13734.1|2604092_2605043_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13735.1|2605141_2606383_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
AXK13736.1|2606532_2607513_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13737.1|2607711_2608968_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AXK13738.1|2609170_2609596_+	DUF1841 family protein	NA	NA	NA	NA	NA
AXK13739.1|2609637_2610000_-	cytochrome c	NA	NA	NA	NA	NA
AXK13740.1|2610012_2610366_-	cytochrome c	NA	NA	NA	NA	NA
AXK13741.1|2610532_2611483_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13742.1|2611581_2612532_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK15113.1|2612624_2613512_+	MoxR family ATPase	NA	NA	NA	NA	NA
AXK13743.1|2613533_2614706_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AXK13744.1|2614709_2615252_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXK13745.1|2615289_2615664_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13746.1|2615996_2618747_+	insulinase family protein	NA	A0A2K9LA15	Tupanvirus	28.1	1.5e-19
AXK13747.1|2618915_2620049_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	60.8	3.9e-19
AXK13748.1|2620149_2622075_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.3	1.1e-146
AXK13749.1|2622165_2622546_-	thioredoxin	NA	NA	NA	NA	NA
AXK13750.1|2622553_2623108_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AXK15114.1|2623249_2623492_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13751.1|2623573_2624662_-	ferrochelatase	NA	NA	NA	NA	NA
AXK13752.1|2624719_2625724_-	HrcA family transcriptional regulator	NA	NA	NA	NA	NA
AXK13753.1|2625838_2626738_+	NAD kinase	NA	NA	NA	NA	NA
AXK13754.1|2626753_2628415_+	DNA repair protein RecN	NA	NA	NA	NA	NA
AXK15115.1|2628489_2628909_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA	NA
AXK13755.1|2629059_2629608_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AXK13756.1|2629608_2630418_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AXK13757.1|2630454_2631516_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
AXK13758.1|2631828_2632620_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXK15116.1|2632632_2634069_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AXK13759.1|2634084_2635071_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13760.1|2635108_2635957_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AXK13761.1|2635957_2636557_-	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
AXK13762.1|2636564_2639504_-	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA	NA
AXK13763.1|2639500_2639773_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
AXK13764.1|2639783_2641037_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
AXK13765.1|2641318_2642344_+	dipeptidase	NA	NA	NA	NA	NA
AXK13766.1|2642411_2643455_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13767.1|2643451_2644480_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
AXK13768.1|2644485_2645361_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	37.6	2.2e-33
AXK13769.1|2645364_2646318_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13770.1|2646320_2647271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2692209	2712105	4112629	tRNA,transposase	Geobacillus_virus(33.33%)	23	NA	NA
AXK13810.1|2692209_2693160_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13811.1|2693270_2693453_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13812.1|2693552_2694149_-	lipoprotein	NA	NA	NA	NA	NA
AXK13813.1|2694332_2695424_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13814.1|2695923_2696334_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13815.1|2696392_2696734_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
AXK13816.1|2696739_2699157_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AXK13817.1|2699169_2700192_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AXK13818.1|2700266_2700626_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AXK13819.1|2700641_2700839_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AXK13820.1|2701174_2702125_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13821.1|2702223_2703174_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13822.1|2703160_2703349_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13823.1|2703368_2703818_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AXK13824.1|2703814_2704765_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13825.1|2704868_2705150_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13826.1|2705264_2706713_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AXK13827.1|2706823_2707774_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13828.1|2708018_2708732_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXK13829.1|2708854_2709082_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXK13830.1|2709376_2710015_-	DedA family protein	NA	NA	NA	NA	NA
AXK13831.1|2710087_2711158_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AXK13832.1|2711154_2712105_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2732976	2877420	4112629	tRNA,transposase	Bacillus_virus(16.67%)	115	NA	NA
AXK13853.1|2732976_2733927_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13854.1|2733913_2734099_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13855.1|2734219_2735578_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AXK13856.1|2735689_2737417_+	STAS domain-containing protein	NA	NA	NA	NA	NA
AXK13857.1|2738038_2738989_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13858.1|2739738_2740173_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AXK13859.1|2740165_2741401_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AXK13860.1|2741408_2742203_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK13861.1|2742199_2743003_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
AXK13862.1|2743029_2744007_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13863.1|2744035_2745607_-	amidohydrolase	NA	NA	NA	NA	NA
AXK13864.1|2745617_2746439_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13865.1|2748163_2749594_-	MFS transporter	NA	NA	NA	NA	NA
AXK13866.1|2749606_2750296_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13867.1|2750391_2751732_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AXK13868.1|2751733_2752021_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXK13869.1|2752079_2752358_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13870.1|2752344_2753937_-	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
AXK13871.1|2754033_2755494_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
AXK13872.1|2755716_2756328_+	DUF2239 family protein	NA	NA	NA	NA	NA
AXK13873.1|2760074_2761025_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK13874.1|2761440_2764077_-	GTP-binding protein	NA	NA	NA	NA	NA
AXK13875.1|2764073_2765198_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AXK13876.1|2765194_2766577_-	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA	NA
AXK13877.1|2766712_2767180_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXK13878.1|2768097_2769243_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13879.1|2769244_2770975_-	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13880.1|2771092_2771401_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13881.1|2771413_2772226_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AXK13882.1|2773106_2775272_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.9e-14
AXK13883.1|2775376_2776186_+	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	1.6e-22
AXK13884.1|2776225_2777830_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
AXK13885.1|2777910_2778651_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13886.1|2778658_2779153_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK15121.1|2779525_2780545_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13887.1|2780541_2781924_-	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
AXK13888.1|2781956_2782817_-	amidohydrolase	NA	NA	NA	NA	NA
AXK13889.1|2783820_2784702_+	NRDE family protein	NA	NA	NA	NA	NA
AXK13890.1|2784760_2785198_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
AXK13891.1|2785288_2786260_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK13892.1|2786298_2787243_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
AXK13893.1|2787338_2788148_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13894.1|2788224_2788599_-	hypothetical protein	NA	NA	NA	NA	NA
AXK13895.1|2788705_2789398_-	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
AXK13896.1|2789390_2789807_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AXK13897.1|2789917_2790550_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
AXK13898.1|2790578_2791022_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AXK13899.1|2791043_2792135_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13900.1|2792189_2792990_-	aldolase	NA	NA	NA	NA	NA
AXK13901.1|2793125_2793746_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXK13902.1|2793885_2794359_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13903.1|2795498_2796449_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13904.1|2804339_2808386_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AXK13905.1|2808698_2809280_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AXK13906.1|2809276_2810575_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AXK13907.1|2810654_2811683_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AXK13908.1|2811606_2811957_+	hypothetical protein	NA	NA	NA	NA	NA
AXK13909.1|2811943_2812894_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13910.1|2812890_2813841_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK13911.1|2814029_2814980_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13912.1|2815206_2815812_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AXK13913.1|2815865_2817179_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AXK13914.1|2817253_2817724_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
AXK13915.1|2817723_2818512_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AXK13916.1|2818522_2820175_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AXK13917.1|2820262_2821213_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK15122.1|2822374_2822881_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AXK13918.1|2822877_2823642_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AXK13919.1|2823657_2823942_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AXK13920.1|2824006_2824996_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AXK13921.1|2825167_2826097_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AXK13922.1|2826068_2826755_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AXK13923.1|2826788_2827334_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AXK13924.1|2827378_2828644_+	M48 family peptidase	NA	NA	NA	NA	NA
AXK13925.1|2828640_2829543_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AXK13926.1|2830724_2831669_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK13927.1|2831763_2833281_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK13928.1|2833322_2834951_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AXK13929.1|2835058_2835940_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13930.1|2839052_2839427_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AXK13931.1|2839451_2839790_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AXK13932.1|2839833_2841468_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AXK13933.1|2841506_2842853_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AXK15123.1|2842960_2844382_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AXK13934.1|2844451_2845036_-	nitroreductase	NA	NA	NA	NA	NA
AXK13935.1|2845138_2846089_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13936.1|2846223_2847330_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13937.1|2847340_2848438_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AXK13938.1|2848582_2849788_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AXK13939.1|2849794_2850316_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AXK13940.1|2850312_2850804_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AXK13941.1|2850800_2851052_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AXK13942.1|2851032_2851518_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AXK13943.1|2851653_2855115_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
AXK13944.1|2855111_2856017_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AXK13945.1|2856026_2856458_-	lipoprotein	NA	NA	NA	NA	NA
AXK15124.1|2856704_2857208_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AXK13946.1|2857219_2858686_+	MFS transporter	NA	NA	NA	NA	NA
AXK13947.1|2858760_2859636_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AXK15125.1|2859632_2860640_-	biotin synthase	NA	NA	NA	NA	NA
AXK13948.1|2861107_2861413_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AXK13949.1|2861503_2862094_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK13950.1|2862284_2863301_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AXK13951.1|2863492_2865829_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
AXK13952.1|2865911_2866346_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AXK13953.1|2866444_2867395_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK13954.1|2867493_2868444_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13955.1|2868440_2869235_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AXK13956.1|2869266_2869971_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK13957.1|2870045_2870846_-	SURF1 family protein	NA	NA	NA	NA	NA
AXK13958.1|2870842_2871250_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AXK13959.1|2871246_2871888_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AXK13960.1|2871880_2873902_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXK13961.1|2875141_2876473_+	MFS transporter	NA	NA	NA	NA	NA
AXK13962.1|2876469_2877420_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2891896	2933255	4112629	protease,transposase	uncultured_Mediterranean_phage(40.0%)	30	NA	NA
AXK13972.1|2891896_2892847_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13973.1|2893177_2896999_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXK13974.1|2897155_2897824_-	lipoprotein	NA	NA	NA	NA	NA
AXK13975.1|2897828_2899502_-	MCE family protein	NA	NA	NA	NA	NA
AXK13976.1|2899520_2900840_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
AXK13977.1|2900844_2903196_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AXK15126.1|2903215_2905384_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AXK13978.1|2905380_2910570_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AXK13979.1|2910659_2910974_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AXK13980.1|2911201_2911447_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AXK13981.1|2911541_2912060_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AXK13982.1|2912159_2913365_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AXK13983.1|2913480_2914878_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AXK13984.1|2914994_2915573_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AXK13985.1|2915645_2917037_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AXK13986.1|2917204_2918155_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13987.1|2918435_2919056_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AXK13988.1|2919052_2919466_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AXK13989.1|2919462_2920506_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AXK13990.1|2920561_2920750_+	Trm112 family protein	NA	NA	NA	NA	NA
AXK13991.1|2920759_2921524_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AXK13992.1|2921614_2922271_+	adenylate kinase	NA	NA	NA	NA	NA
AXK13993.1|2922362_2923121_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK13994.1|2923146_2924748_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AXK13995.1|2924948_2925953_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AXK13996.1|2926053_2926317_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AXK13997.1|2926434_2927211_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AXK13998.1|2927801_2928752_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK13999.1|2931135_2932248_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
AXK14000.1|2932304_2933255_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	2963641	3017872	4112629	transposase	Planktothrix_phage(16.67%)	51	NA	NA
AXK14029.1|2963641_2964592_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14030.1|2964578_2964824_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14031.1|2964712_2965609_-	inositol monophosphatase	NA	NA	NA	NA	NA
AXK14032.1|2967886_2970112_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
AXK14033.1|2970276_2971365_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AXK14034.1|2971321_2971975_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK14035.1|2972022_2972820_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK14036.1|2973351_2974302_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14037.1|2974382_2975531_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
AXK14038.1|2975587_2976538_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14039.1|2976524_2976743_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14040.1|2976636_2976942_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AXK14041.1|2976970_2977405_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AXK14042.1|2977406_2978651_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AXK14043.1|2978647_2979358_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AXK15128.1|2979372_2980284_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK14044.1|2980646_2981051_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14045.1|2981047_2981506_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14046.1|2981512_2982421_+	hypothetical protein	NA	NA	NA	NA	NA
AXK15129.1|2982417_2983284_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AXK14047.1|2983270_2984098_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AXK14048.1|2984108_2985236_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AXK14049.1|2986313_2987552_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14050.1|2987593_2988856_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
AXK14051.1|2988862_2989615_+	DNA-binding protein	NA	NA	NA	NA	NA
AXK14052.1|2989666_2989852_-	hypothetical protein	NA	NA	NA	NA	NA
AXK15130.1|2990127_2990592_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AXK14053.1|2990623_2991283_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AXK14054.1|2991427_2993536_+	AsmA family protein	NA	NA	NA	NA	NA
AXK14055.1|2993532_2994483_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14056.1|2994586_2995207_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK15131.1|2995310_2996051_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK14057.1|2997185_2998310_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14058.1|2998355_2998724_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14059.1|2998965_2999916_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14060.1|3000951_3001494_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14061.1|3001698_3001893_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14062.1|3001879_3002830_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14063.1|3002826_3003792_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14064.1|3003861_3004698_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
AXK14065.1|3005174_3006320_+	porin	NA	NA	NA	NA	NA
AXK14066.1|3006381_3007332_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14067.1|3007524_3008307_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK15132.1|3008320_3009070_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
AXK14068.1|3009097_3010444_-	MFS transporter	NA	NA	NA	NA	NA
AXK14069.1|3010469_3011399_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK14070.1|3011514_3012420_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14071.1|3012437_3013637_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AXK14072.1|3013709_3014402_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
AXK15133.1|3014450_3016940_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.3e-86
AXK14073.1|3016921_3017872_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	3388326	3442067	4112629	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
AXK14365.1|3388326_3389277_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14366.1|3389681_3390326_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AXK14367.1|3390350_3390935_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AXK14368.1|3391035_3391653_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AXK14369.1|3391655_3393371_-	urease subunit alpha	NA	NA	NA	NA	NA
AXK14370.1|3393367_3393676_-	urease subunit beta	NA	NA	NA	NA	NA
AXK14371.1|3393692_3394328_-	urease accessory protein UreJ	NA	NA	NA	NA	NA
AXK14372.1|3394354_3394657_-	urease subunit gamma	NA	NA	NA	NA	NA
AXK14373.1|3394757_3395612_-	urease accessory protein UreD	NA	NA	NA	NA	NA
AXK14374.1|3396193_3396466_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXK14375.1|3396883_3397291_-	GFA family protein	NA	NA	NA	NA	NA
AXK14376.1|3397660_3398455_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14377.1|3398555_3399791_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AXK14378.1|3399859_3400876_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK14379.1|3400872_3402264_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AXK14380.1|3402260_3403457_+	MFS transporter	NA	NA	NA	NA	NA
AXK14381.1|3403453_3404992_-	SpoVR family protein	NA	NA	NA	NA	NA
AXK14382.1|3404988_3406248_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
AXK14383.1|3408188_3409139_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14384.1|3409905_3411000_-	CoA transferase	NA	NA	NA	NA	NA
AXK14385.1|3410992_3412327_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AXK14386.1|3412280_3412964_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14387.1|3412989_3414153_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK14388.1|3414149_3415151_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK14389.1|3415150_3416023_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK14390.1|3416019_3416769_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AXK14391.1|3416765_3417557_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AXK14392.1|3417553_3418693_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK14393.1|3419001_3419754_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK14394.1|3419787_3420570_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK14395.1|3420573_3420963_+	DNA-binding protein	NA	NA	NA	NA	NA
AXK14396.1|3422102_3422966_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK14397.1|3423001_3424090_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
AXK14398.1|3424086_3425037_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14399.1|3425023_3425392_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14400.1|3425390_3428369_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14401.1|3429295_3430174_+	fatty acid desaturase	NA	NA	NA	NA	NA
AXK14402.1|3432122_3433073_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14403.1|3433069_3433537_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AXK14404.1|3433579_3434350_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXK14405.1|3434370_3435171_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AXK14406.1|3435181_3436591_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AXK14407.1|3436685_3437471_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AXK14408.1|3437710_3438727_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AXK14409.1|3438834_3439227_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AXK14410.1|3439364_3440045_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
AXK14411.1|3440049_3441048_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK14412.1|3441116_3442067_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	3448222	3507522	4112629	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
AXK14416.1|3448222_3449986_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AXK14417.1|3450097_3450976_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AXK14418.1|3451088_3451904_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AXK14419.1|3451907_3452159_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
AXK14420.1|3452243_3453260_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AXK14421.1|3453590_3453812_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AXK14422.1|3456172_3457090_-	DMT family transporter	NA	NA	NA	NA	NA
AXK14423.1|3457587_3458796_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK14424.1|3458875_3460447_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK14425.1|3460564_3461500_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AXK14426.1|3461688_3462633_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AXK14427.1|3462701_3462917_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14428.1|3463200_3468918_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AXK14429.1|3468923_3470051_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AXK14430.1|3470106_3470733_+	aminotransferase	NA	NA	NA	NA	NA
AXK14431.1|3471004_3472021_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AXK14432.1|3472116_3472827_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXK15157.1|3472823_3473813_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK14433.1|3473944_3475540_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AXK14434.1|3475542_3476280_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14435.1|3476435_3477308_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AXK14436.1|3477576_3478797_+	MFS transporter	NA	NA	NA	NA	NA
AXK14437.1|3478793_3479453_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AXK14438.1|3479524_3480157_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AXK14439.1|3480186_3480705_+	flavin reductase	NA	NA	NA	NA	NA
AXK14440.1|3480715_3481825_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK14441.1|3481871_3482726_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AXK14442.1|3482727_3483630_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14443.1|3484852_3485803_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14444.1|3487559_3488549_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14445.1|3488724_3489513_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AXK14446.1|3489509_3490541_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AXK14447.1|3490559_3491123_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AXK14448.1|3491178_3492699_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AXK14449.1|3492962_3493667_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AXK14450.1|3493674_3494412_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AXK14451.1|3494517_3494892_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AXK14452.1|3494934_3496224_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14453.1|3496220_3497390_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
AXK14454.1|3497386_3498226_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AXK14455.1|3498285_3499221_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AXK14456.1|3499233_3500184_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14457.1|3500282_3501245_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AXK14458.1|3501276_3501636_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AXK14459.1|3501760_3502663_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AXK14460.1|3502664_3504437_-	M61 family peptidase	NA	NA	NA	NA	NA
AXK14461.1|3504471_3505248_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK14462.1|3506571_3507522_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	3522460	3580533	4112629	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
AXK14474.1|3522460_3523411_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14475.1|3523539_3524673_-	M20 family peptidase	NA	NA	NA	NA	NA
AXK14476.1|3524716_3525622_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXK14477.1|3525624_3527325_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AXK14478.1|3527321_3528242_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK14479.1|3528249_3529227_-	ABC transporter permease	NA	NA	NA	NA	NA
AXK14480.1|3529285_3530320_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AXK14481.1|3532294_3532531_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14482.1|3532657_3533521_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AXK14483.1|3533609_3534431_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK14484.1|3534510_3535248_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AXK14485.1|3535244_3536237_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AXK14486.1|3536350_3537013_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14487.1|3537057_3538206_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXK14488.1|3540529_3541480_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14489.1|3541820_3542771_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14490.1|3542869_3543820_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14491.1|3544116_3544614_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14492.1|3544656_3546432_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AXK15160.1|3546478_3547306_+	copper resistance protein B	NA	NA	NA	NA	NA
AXK14493.1|3547312_3548047_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AXK14494.1|3549216_3550011_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14495.1|3550300_3550891_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AXK14496.1|3550924_3552253_-	amidase	NA	NA	NA	NA	NA
AXK14497.1|3552327_3553473_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK14498.1|3553584_3554583_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14499.1|3554545_3554980_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AXK14500.1|3556496_3557381_+	DMT family transporter	NA	NA	NA	NA	NA
AXK14501.1|3557377_3558583_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AXK14502.1|3558579_3559440_-	endonuclease	NA	NA	NA	NA	NA
AXK14503.1|3559552_3561343_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AXK14504.1|3561383_3562049_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AXK14505.1|3562049_3562358_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AXK15161.1|3562523_3563810_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14506.1|3565243_3566194_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14507.1|3568145_3569360_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AXK14508.1|3569465_3570455_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AXK14509.1|3570451_3571060_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AXK14510.1|3571072_3571702_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AXK14511.1|3571698_3572319_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AXK14512.1|3572350_3573142_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AXK14513.1|3573984_3574449_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AXK14514.1|3574467_3575394_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AXK14515.1|3575447_3576734_-	cytochrome c	NA	NA	NA	NA	NA
AXK14516.1|3577664_3578537_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AXK14517.1|3578533_3579484_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AXK14518.1|3579582_3580533_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 33
CP031114	Bordetella pertussis strain UK76 chromosome, complete genome	4112629	4011697	4076609	4112629	transposase	Planktothrix_phage(40.0%)	58	NA	NA
AXK14905.1|4011697_4012183_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14906.1|4012401_4013382_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK14907.1|4013648_4014458_+	Pertussis toxin subunit 1	NA	NA	NA	NA	NA
AXK14908.1|4014497_4015178_+	Pertussis toxin subunit 2	NA	NA	NA	NA	NA
AXK14909.1|4015171_4015630_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
AXK14910.1|4015641_4016004_+	Pertussis toxin subunit 5	NA	NA	NA	NA	NA
AXK14911.1|4016086_4016770_+	Pertussis toxin subunit 3	NA	NA	NA	NA	NA
AXK14912.1|4016825_4017134_+	type IV secretion protein A	NA	NA	NA	NA	NA
AXK14913.1|4017152_4017467_+	type IV secretion protein B	NA	NA	NA	NA	NA
AXK14914.1|4017463_4019938_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
AXK14915.1|4019945_4021337_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
AXK14916.1|4021333_4021519_+	type IV secretion protein I	NA	NA	NA	NA	NA
AXK14917.1|4021497_4022199_+	type IV secretion protein E	NA	NA	NA	NA	NA
AXK14918.1|4022195_4023017_+	P-type conjugative transfer protein VirB9	NA	NA	NA	NA	NA
AXK15182.1|4022997_4024122_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
AXK14919.1|4024114_4025134_+	type IV secretion protein H	NA	NA	NA	NA	NA
AXK14920.1|4025339_4026374_-	DMT family transporter	NA	NA	NA	NA	NA
AXK15183.1|4026474_4027266_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXK14921.1|4027348_4027723_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
AXK14922.1|4027700_4029110_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AXK14923.1|4029102_4030485_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
AXK14924.1|4030819_4032424_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK14925.1|4032459_4033473_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK14926.1|4033483_4034410_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK14927.1|4034800_4035751_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14928.1|4035920_4037147_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AXK14929.1|4037346_4038213_+	ATP-binding protein	NA	NA	NA	NA	NA
AXK14930.1|4038205_4039168_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AXK14931.1|4039268_4040219_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXK14932.1|4040317_4041268_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14933.1|4041366_4042317_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AXK14934.1|4042313_4043807_-	RND transporter	NA	NA	NA	NA	NA
AXK14935.1|4043803_4046911_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXK14936.1|4046907_4049976_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXK14937.1|4049972_4051223_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXK14938.1|4051403_4052165_-	cell division protein ZapD	NA	NA	NA	NA	NA
AXK14939.1|4052197_4052848_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AXK14940.1|4052850_4053690_-	prepilin peptidase	NA	NA	NA	NA	NA
AXK14941.1|4053930_4054674_+	hypothetical protein	NA	NA	NA	NA	NA
AXK14942.1|4054756_4055104_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AXK14943.1|4055201_4056044_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AXK14944.1|4056088_4056976_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AXK14945.1|4057002_4057191_-	DUF3460 family protein	NA	NA	NA	NA	NA
AXK14946.1|4057288_4058746_+	MFS transporter	NA	NA	NA	NA	NA
AXK14947.1|4058732_4060259_+	glycerol kinase	NA	NA	NA	NA	NA
AXK14948.1|4060277_4060745_-	hypothetical protein	NA	NA	NA	NA	NA
AXK14949.1|4060744_4061767_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXK14950.1|4061887_4062628_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AXK14951.1|4062682_4063783_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK14952.1|4063784_4064975_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXK14953.1|4065094_4066111_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AXK14954.1|4066429_4067101_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AXK14955.1|4067097_4068006_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK14956.1|4068217_4068865_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AXK14957.1|4072716_4073793_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AXK14958.1|4073803_4074613_-	transcriptional regulator	NA	NA	NA	NA	NA
AXK14959.1|4074702_4075476_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXK14960.1|4075658_4076609_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
